Citrus Sinensis ID: 009091
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 544 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZSA2 | 531 | Calcium-dependent protein | yes | no | 0.961 | 0.984 | 0.746 | 0.0 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.977 | 0.960 | 0.705 | 0.0 | |
| P28582 | 532 | Calcium-dependent protein | N/A | no | 0.933 | 0.954 | 0.755 | 0.0 | |
| P53683 | 533 | Calcium-dependent protein | yes | no | 0.966 | 0.986 | 0.715 | 0.0 | |
| P49101 | 513 | Calcium-dependent protein | N/A | no | 0.917 | 0.972 | 0.748 | 0.0 | |
| Q38868 | 541 | Calcium-dependent protein | no | no | 0.897 | 0.902 | 0.734 | 0.0 | |
| Q9C6P3 | 521 | Calcium-dependent protein | no | no | 0.908 | 0.948 | 0.730 | 0.0 | |
| Q1PFH8 | 551 | Calcium-dependent protein | no | no | 0.970 | 0.958 | 0.675 | 0.0 | |
| Q9M101 | 520 | Calcium-dependent protein | no | no | 0.941 | 0.984 | 0.670 | 0.0 | |
| Q8RWL2 | 534 | Calcium-dependent protein | no | no | 0.832 | 0.848 | 0.722 | 0.0 |
| >sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/540 (74%), Positives = 467/540 (86%), Gaps = 17/540 (3%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
MGC+ SK R +D G +S + P QT+ + ++ PK P
Sbjct: 1 MGCFSSKHRKTQND-GGEKSIPIN------------PVQTHVVPEHRKPQTPTPK---PM 44
Query: 61 PQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGN 120
QP Q + + +++ V+ P+T+LGKP EDIR+FY+LGKELGRGQFGITY+C E TGN
Sbjct: 45 TQPIHQQISTPSSNPVSVRDPDTILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGN 104
Query: 121 SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG 180
+YACKSILKRKL++KQD+ED+KREIQIMQ+LSGQ NIVE +GAYEDRQS+HLVMELC+GG
Sbjct: 105 TYACKSILKRKLISKQDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGG 164
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
ELFD+IIAQGHY+E+AAA + R+IVNVV CHFMGV+HRDLKPENFLLS+K+ AMLKAT
Sbjct: 165 ELFDRIIAQGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKAT 224
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAET 300
DFGLSVFI+EGKVYRDIVGSAYYVAPEVLRRSYGKEID+WSAGVILYILLSGVPPFWAE
Sbjct: 225 DFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAEN 284
Query: 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
EKGIFD ++KG +DF SEPW IS+SAKDLVRKML +DPK+RIT+A+VLEHPW++ GGEA
Sbjct: 285 EKGIFDEVIKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEA 343
Query: 361 SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYE 420
DKPI SAVLSRMKQFRAMNKLKK+ALKVIAE+LSEEEIKGLKTMFAN+DTDKSGTITYE
Sbjct: 344 PDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYE 403
Query: 421 ELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480
ELKTGL RLGS+LSETEVKQLM+AADVDGNGTIDY EFISATMHRY+L+RDEH+YKAFQ+
Sbjct: 404 ELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQH 463
Query: 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
FDKDNSG+ITRDELE+AMK+YG+GDEASIKE+ISEVDTDNDGRIN+EEFC MMRSG+ QP
Sbjct: 464 FDKDNSGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGRINFEEFCAMMRSGSTQP 523
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May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/563 (70%), Positives = 463/563 (82%), Gaps = 31/563 (5%)
Query: 1 MGCWGSKERVPPSDM-NGYRSSTAHSSHQATGVA-----------TQTPYQTYQQQQQQQ 48
MGC+ SK R SD+ NG S+ ++ V+ Q P T QQ
Sbjct: 1 MGCFSSKHRNTESDIINGSVQSSIPTNQPENHVSRDVLKPQKPPSPQIPTTTQSNHHHQQ 60
Query: 49 LHVQPPKMSAPQPQPRQQPMKSSATSTRPVQ-----KPETVLGKPLEDIRQFYTLGKELG 103
+ +P Q ++ T+P++ + ET+LGKP E+IR+ YTLGKELG
Sbjct: 61 -----------ESKPVNQQIEKKHVLTQPLKPIVFRETETILGKPFEEIRKLYTLGKELG 109
Query: 104 RGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA 163
RGQFGITY C ENSTGN+YACKSILKRKL KQD +D+KREIQIMQ+LSGQ+NIVE +GA
Sbjct: 110 RGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKREIQIMQYLSGQENIVEIKGA 169
Query: 164 YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKP 223
YEDRQS+HLVMELC G ELFD+IIAQGHY+EKAAA + R+++NVV CHFMGV+HRDLKP
Sbjct: 170 YEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAAAGVIRSVLNVVQICHFMGVIHRDLKP 229
Query: 224 ENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAG 283
ENFLL++ D AMLKATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRRSYGKEID+WSAG
Sbjct: 230 ENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAG 289
Query: 284 VILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI 343
+ILYILL GVPPFW+ETEKGIF+ I+KG +DF+S+PW IS+SAKDLVRK+L +DPK+RI
Sbjct: 290 IILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPSISESAKDLVRKLLTKDPKQRI 349
Query: 344 TSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLK 403
++A+ LEHPW+R GGEA DKPI SAVLSRMKQFRAMNKLKK+ALKVIAE+LSEEEIKGLK
Sbjct: 350 SAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLK 408
Query: 404 TMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463
TMFANMDTDKSGTITYEELK GLA+LGSKL+E EVKQLM+AADVDGNGTIDYIEFISATM
Sbjct: 409 TMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAADVDGNGTIDYIEFISATM 468
Query: 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGR 523
HRYR +RDEH++KAFQYFDKDNSG+IT DELE+AMK+YG+GDEASIKE+I+EVDTDNDGR
Sbjct: 469 HRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGMGDEASIKEVIAEVDTDNDGR 528
Query: 524 INYEEFCTMMRSGT--PQPAKLI 544
INYEEFC MMRSG PQ K++
Sbjct: 529 INYEEFCAMMRSGITLPQQGKIL 551
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2 | Back alignment and function description |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/532 (75%), Positives = 457/532 (85%), Gaps = 24/532 (4%)
Query: 2 GCWGSKERVPPSDMNGYRSS-TAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
GC+ KE +D NGYRS+ TA+ H T Q+Y++ Q+ P+ Q
Sbjct: 3 GCFSKKEY--QADGNGYRSAPTAY--HTVTD-------QSYEKSSQRSQPQAQPQPQVQQ 51
Query: 61 PQPRQQPMKSSATSTRPVQKPE--TVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENST 118
P +P R V +PE T+LGKP EDIR YTLGKELGRGQFG Y CTENS+
Sbjct: 52 TGPSLKP--------RQVHRPESNTILGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSS 103
Query: 119 GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178
G YACKSILKRKLV+K D+EDIKREIQI+QHLSGQ NIVEF+G +EDRQSVHLVMELC+
Sbjct: 104 GQLYACKSILKRKLVSKNDKEDIKREIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCA 163
Query: 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238
GGELFD+IIAQGHY+E+AAA +CR IVNVVH CHFMGVMHRDLKPENFLLS+KD AMLK
Sbjct: 164 GGELFDRIIAQGHYSERAAATICRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLK 223
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWA 298
ATDFGLSVFI+EGKVYR+IVGSAYYVAPEVLRRSYGKEID+WSAGVILYILLSGVPPFWA
Sbjct: 224 ATDFGLSVFIEEGKVYRNIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWA 283
Query: 299 ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
E EKGIFDAIL+G +DFESEPW +S+SAKDLVRKML QDP++RITSA+VL+HPWMREGG
Sbjct: 284 ENEKGIFDAILEGVIDFESEPWPSVSNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGG 343
Query: 359 EASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTIT 418
EASDKPI SAVLSRMKQFRAMNKLK++ALKVIAE+LSEEEIKGLK+MFANMDTDKSGTIT
Sbjct: 344 EASDKPIDSAVLSRMKQFRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMDTDKSGTIT 403
Query: 419 YEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478
YEELK+GLARLGSKLSE EV+QLMDAADVDGNGTIDY+EFI+ATMHR++LE EH +AF
Sbjct: 404 YEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLESYEH--QAF 461
Query: 479 QYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFC 530
QYFDKDNSG+IT+DELE+AMK+YG+GDEA+IK+IISEVD+DNDGRINY+EFC
Sbjct: 462 QYFDKDNSGFITKDELESAMKEYGMGDEATIKDIISEVDSDNDGRINYDEFC 513
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May play a role in signal transduction pathways that involve calcium as a second messenger. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53683|CDPK2_ORYSJ Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/549 (71%), Positives = 451/549 (82%), Gaps = 23/549 (4%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
MG S+ P S G ++ SHQ T Y H QPP P
Sbjct: 1 MGSCCSRATSPDSGRGG--ANGYGYSHQTKPAQTTPSYN----------HPQPP----PP 44
Query: 61 PQPRQQP-----MKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
+ R P P P+T+LGKP +D+R Y+LGKELGRGQFG+TYLCTE
Sbjct: 45 AEVRYTPSAMNPPVVPPVVAPPKPTPDTILGKPYDDVRSVYSLGKELGRGQFGVTYLCTE 104
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
++G YACKSI KRKLV+K D+EDI+REIQIMQHLSGQQNIVEFRGAYED+ +VH+VME
Sbjct: 105 IASGKQYACKSISKRKLVSKADKEDIRREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVME 164
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
LC+GGELFD+IIA+GHY+E+AAA +CRA+VNVV+ CHFMGVMHRDLKPENFLL+ K+ A
Sbjct: 165 LCAGGELFDRIIAKGHYSERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLATKEENA 224
Query: 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPP 295
MLKATDFGLSVFI+EGK+YRDIVGSAYYVAPEVLRR+YGKEIDVWSAGVILYILLSGVPP
Sbjct: 225 MLKATDFGLSVFIEEGKMYRDIVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPP 284
Query: 296 FWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
FWAETEKGIFDAIL+G +DFES+PW IS+SAKDLVRKML QDPKKRITSA+VL+HPW+R
Sbjct: 285 FWAETEKGIFDAILQGEIDFESQPWPSISESAKDLVRKMLTQDPKKRITSAQVLQHPWLR 344
Query: 356 EGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSG 415
+ GEASDKPI SAVLSRMKQFRAMNKLKKMALKVIA L+EEEIKGLK MF NMDTD SG
Sbjct: 345 D-GEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSG 403
Query: 416 TITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLY 475
TITYEELK GLA+LGSKLSE EVKQLM+AADVDGNG+IDY+EFI+ATMHR++LERDEHL+
Sbjct: 404 TITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLF 463
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR- 534
KAFQYFDKDNSG+ITRDELE+A+ ++ +GD ++IK+IISEVDTDNDGRINYEEFC MMR
Sbjct: 464 KAFQYFDKDNSGFITRDELESALIEHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRG 523
Query: 535 SGTPQPAKL 543
G QP +L
Sbjct: 524 GGMQQPMRL 532
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May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/508 (74%), Positives = 442/508 (87%), Gaps = 9/508 (1%)
Query: 42 QQQQQQQLHV-QPPKMSAPQPQPRQQPMKSSATSTRPVQK-----PETVLGKPLEDIRQF 95
+Q +++ L V PP+ +A + R P +++++ PV +T+LGK ED+R
Sbjct: 8 RQSRRKHLRVYNPPQQAA---EVRYTPSATNSSAVPPVAVPPKPTADTILGKQYEDVRSV 64
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y+ GKELGRGQFG+TYLCTE ++G YACKSI KRKLV+K DREDI+REIQIMQHLSGQ
Sbjct: 65 YSFGKELGRGQFGVTYLCTEIASGRQYACKSISKRKLVSKADREDIRREIQIMQHLSGQP 124
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIVEFRGAYED+ +VH+VMELC+GGELFD+IIA+GHYTE+AAA +CRA+VNVV+ CHFMG
Sbjct: 125 NIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYTERAAATICRAVVNVVNICHFMG 184
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
VMHRDLKPENFLL+ + AMLKATDFGLSVFI+EGK+YRDIVGSAYYVAPEVLRRSYGK
Sbjct: 185 VMHRDLKPENFLLATMEENAMLKATDFGLSVFIEEGKMYRDIVGSAYYVAPEVLRRSYGK 244
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
EIDVWSAGVILYILLSGVPPFWAE EKGIFDAIL +DFES+PW IS+SAKDLVRKML
Sbjct: 245 EIDVWSAGVILYILLSGVPPFWAEIEKGIFDAILHEEIDFESQPWPSISESAKDLVRKML 304
Query: 336 IQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALS 395
+DPKKR+TSA+VL+H W+REGGEASDKPI SAVLSRMKQFRAMNKLKKMALKVIA L+
Sbjct: 305 TRDPKKRLTSAQVLQHQWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLN 364
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
EEEIKGLK MF NMDTD SGTITYEELK GLA+LGSKLSE EVKQLM+AADVDGNG+IDY
Sbjct: 365 EEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDY 424
Query: 456 IEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISE 515
+EFI+ATMHR++LERDEHL+KAFQYFDKDNSG+ITRDELE+A+ ++ +GD ++I+EIISE
Sbjct: 425 VEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIREIISE 484
Query: 516 VDTDNDGRINYEEFCTMMRSGTPQPAKL 543
VDTDNDGRINYEEFC MMR G QP +L
Sbjct: 485 VDTDNDGRINYEEFCAMMRGGMQQPMRL 512
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Zea mays (taxid: 4577) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/504 (73%), Positives = 434/504 (86%), Gaps = 16/504 (3%)
Query: 52 QPPKMSAPQPQPRQQPMKSSAT----------------STRPVQKPETVLGKPLEDIRQF 95
Q P PQ + QQP K + S + K ++L ED++ F
Sbjct: 31 QDPPSYTPQARTTQQPEKPGSVNSQPPPWRAAAAAPGLSPKTTTKSNSILENAFEDVKLF 90
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YTLGKELGRGQFG+TYLCTENSTG YACKSI K+KLV K D++D++REIQIMQHLSGQ
Sbjct: 91 YTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDMRREIQIMQHLSGQP 150
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIVEF+GAYED ++V+LVMELC+GGELFD+IIA+GHYTE+AAA++CR IVNVV CHFMG
Sbjct: 151 NIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVCRQIVNVVKICHFMG 210
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
V+HRDLKPENFLLS+KD A++KATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRR YGK
Sbjct: 211 VLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 270
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
E+D+WSAG+ILYILLSGVPPFWAETEKGIFDAIL+G +DFES+PW IS SAKDLVR+ML
Sbjct: 271 EVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPSISSSAKDLVRRML 330
Query: 336 IQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALS 395
DPK+RI++A+VL+HPW+REGGEASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE +
Sbjct: 331 TADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENID 390
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
EEI+GLK MFAN+DTD SGTITYEELK GLA+LGSKL+E EVKQLMDAADVDGNG+IDY
Sbjct: 391 TEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDY 450
Query: 456 IEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISE 515
IEFI+ATMHR+RLE +E+LYKAFQ+FDKD+SGYIT DELE+A+K+YG+GD+A+IKE++S+
Sbjct: 451 IEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGMGDDATIKEVLSD 510
Query: 516 VDTDNDGRINYEEFCTMMRSGTPQ 539
VD+DNDGRINYEEFC MMRSG PQ
Sbjct: 511 VDSDNDGRINYEEFCAMMRSGNPQ 534
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/504 (73%), Positives = 439/504 (87%), Gaps = 10/504 (1%)
Query: 43 QQQQQQLHVQPPKMSA--PQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGK 100
+ +++ H P K+S QP P + P K S + +L KP ED++ FYTL K
Sbjct: 26 ENRRRSTHQDPSKISTGTNQPPPWRNPAKHSGAAA--------ILEKPYEDVKLFYTLSK 77
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
ELGRGQFG+TYLCTE STG +ACKSI K+KLV K D+ED++REIQIMQHLSGQ NIVEF
Sbjct: 78 ELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEF 137
Query: 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220
+GAYED ++V+LVMELC+GGELFD+I+A+GHY+E+AAA++CR IVNVV+ CHFMGVMHRD
Sbjct: 138 KGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRD 197
Query: 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVW 280
LKPENFLLS+KD A++KATDFGLSVFI+EG+VY+DIVGSAYYVAPEVL+R YGKEID+W
Sbjct: 198 LKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYYVAPEVLKRRYGKEIDIW 257
Query: 281 SAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPK 340
SAG+ILYILLSGVPPFWAETEKGIFDAIL+G +DFES+PW IS+SAKDLVR+ML QDPK
Sbjct: 258 SAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPK 317
Query: 341 KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIK 400
+RI++AEVL+HPW+REGGEASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE + EEI+
Sbjct: 318 RRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQ 377
Query: 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFIS 460
GLK MFAN+DTD SGTITYEELK GLA+LGS+L+E EVKQLMDAADVDGNG+IDYIEFI+
Sbjct: 378 GLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFIT 437
Query: 461 ATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDN 520
ATMHR+RLE +E++YKAFQ+FDKD SGYIT DELE A+K+YG+GD+A+IKEI+S+VD DN
Sbjct: 438 ATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALKEYGMGDDATIKEILSDVDADN 497
Query: 521 DGRINYEEFCTMMRSGTPQPAKLI 544
DGRINY+EFC MMRSG PQ +L
Sbjct: 498 DGRINYDEFCAMMRSGNPQQPRLF 521
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PFH8|CDPKJ_ARATH Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/545 (67%), Positives = 448/545 (82%), Gaps = 17/545 (3%)
Query: 1 MGCW----GSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQ-----QQQLHV 51
MGC K + P D++G +++ S TP + +Q+Q + Q+ V
Sbjct: 1 MGCLCINLKKKVKKPTPDISGEQNTEVKSREI-------TPKEQPRQRQPAPRAKFQIVV 53
Query: 52 QPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
QP K+ P PQP+++ + +Q+PE +LG+P EDI++ Y+LG+ELGRGQFGITY
Sbjct: 54 QPHKLPLPLPQPQEKQKLINHQKQSTLQQPEPILGRPFEDIKEKYSLGRELGRGQFGITY 113
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
+CTE S+G ++ACKSILKRKL+ +DRED++REIQIM +LSGQ NIVE +GAYEDRQSVH
Sbjct: 114 ICTEISSGKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVH 173
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
LVMELC GGELFDKI +GHY+EKAAA + R++V VV CHFMGV+HRDLKPENFLLS+K
Sbjct: 174 LVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSK 233
Query: 232 D-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILL 290
D +MLKATDFG+SVFI+EGKVY DIVGSAYYVAPEVL+R+YGK ID+WSAGVILYILL
Sbjct: 234 DEASSMLKATDFGVSVFIEEGKVYEDIVGSAYYVAPEVLKRNYGKAIDIWSAGVILYILL 293
Query: 291 SGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
G PPFWAET+KGIF+ IL+G +DFESEPW IS+SAKDLVR ML DPKKR T+A+VLE
Sbjct: 294 CGNPPFWAETDKGIFEEILRGEIDFESEPWPSISESAKDLVRNMLKYDPKKRFTAAQVLE 353
Query: 351 HPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMD 410
HPW+REGGEASDKPI SAVLSRMKQ RAMNKLKK+A K IA+ L EEE+KGLKTMFANMD
Sbjct: 354 HPWIREGGEASDKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFANMD 413
Query: 411 TDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470
TDKSGTITY+ELK+GL +LGS+L+ETEVKQL++ ADVDGNGTIDYIEFISATM+R+R+ER
Sbjct: 414 TDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVER 473
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFC 530
+++L+KAFQ+FDKDNSG+I+R ELETAMK+Y +GD+ IKEIISEVD DNDG INY+EFC
Sbjct: 474 EDNLFKAFQHFDKDNSGFISRQELETAMKEYNMGDDIMIKEIISEVDADNDGSINYQEFC 533
Query: 531 TMMRS 535
MM+S
Sbjct: 534 NMMKS 538
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M101|CDPKN_ARATH Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/540 (67%), Positives = 430/540 (79%), Gaps = 28/540 (5%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
MGC+ SK R +D G RS P QT+ Q P
Sbjct: 1 MGCFSSKHRKTQNDGGGERSIPI------------IPVQTHIVDQ------------VPD 36
Query: 61 PQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGN 120
+ Q P S S R PET+LGKP EDIR+FY+LG+ELGRG GITY+C E TGN
Sbjct: 37 HRKPQIPSPSIPISVR---DPETILGKPFEDIRKFYSLGRELGRGGLGITYMCKEIGTGN 93
Query: 121 SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG 180
YACKSILKRKL+++ RED+K EIQIMQHLSGQ N+VE +G+YEDR SVHLVMELC+GG
Sbjct: 94 IYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGG 153
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
ELFD+IIAQGHY+E+AAA ++IV+VV CH GV+HRDLKPENFL S+K+ AMLK T
Sbjct: 154 ELFDRIIAQGHYSERAAAGTIKSIVDVVQICHLNGVIHRDLKPENFLFSSKEENAMLKVT 213
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAET 300
DFGLS FI+EGK+Y+D+VGS YYVAPEVLR+SYGKEID+WSAGVILYILL GVPPFWA+
Sbjct: 214 DFGLSAFIEEGKIYKDVVGSPYYVAPEVLRQSYGKEIDIWSAGVILYILLCGVPPFWADN 273
Query: 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
E+G+F ILK +DF EPW ISDSAKDLV KML +DPK+RIT+A+VLEHPW++ GGEA
Sbjct: 274 EEGVFVEILKCKIDFVREPWPSISDSAKDLVEKMLTEDPKRRITAAQVLEHPWIK-GGEA 332
Query: 361 SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYE 420
+KPI S VLSRMKQFRAMNKLKK+ALKV A +LSEEEIKGLKT+FANMDT++SGTITYE
Sbjct: 333 PEKPIDSTVLSRMKQFRAMNKLKKLALKVSAVSLSEEEIKGLKTLFANMDTNRSGTITYE 392
Query: 421 ELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480
+L+TGL+RL S+LSETEV+QL++A+DVDGNGTIDY EFISATMHRY+L DEH++KAFQ+
Sbjct: 393 QLQTGLSRLRSRLSETEVQQLVEASDVDGNGTIDYYEFISATMHRYKLHHDEHVHKAFQH 452
Query: 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
DKD +G+ITRDELE+AMK+YG+GDEASIKE+ISEVDTDNDG+IN+EEF MMR GT QP
Sbjct: 453 LDKDKNGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGKINFEEFRAMMRCGTTQP 512
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Could act as a calcium sensor involved in drought- and salt stress-induced calcium signaling cascades. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8RWL2|CDPKT_ARATH Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/454 (72%), Positives = 394/454 (86%), Gaps = 1/454 (0%)
Query: 84 VLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR 143
+L +P+ D+ Y L KELGRGQFGITY CT+ S G YACKSI KRKL+ ++D ED++R
Sbjct: 73 ILNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRR 132
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA 203
E+ I+QHL+GQ NIVEFRGAYED+ ++HLVMELCSGGELFD+II +G Y+EK AA + R
Sbjct: 133 EVMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQ 192
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
IVNVVH CHFMGV+HRDLKPENFLL + + + +KATDFGLSVFI+EGKVYRDIVGSAYY
Sbjct: 193 IVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRDIVGSAYY 252
Query: 264 VAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323
VAPEVL R+YGKEIDVWSAGV+LYILLSGVPPFW ETEK IF+AIL+G +D E+ PW I
Sbjct: 253 VAPEVLHRNYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLETSPWPTI 312
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLK 383
S+SAKDL+RKMLI+DPKKRIT+AE LEHPWM + + SDKPI SAVL RMKQFRAMNKLK
Sbjct: 313 SESAKDLIRKMLIRDPKKRITAAEALEHPWMTD-TKISDKPINSAVLVRMKQFRAMNKLK 371
Query: 384 KMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMD 443
K+ALKVIAE LSEEEIKGLK F NMDTD+SGTIT++EL+ GL RLGSKL+E+E+KQLM+
Sbjct: 372 KLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLME 431
Query: 444 AADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI 503
AADVD +GTIDYIEF++ATMHR+RLE++E+L +AF+YFDKD SG+ITRDEL+ +M +YG+
Sbjct: 432 AADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMTEYGM 491
Query: 504 GDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
GD+A+I E+I++VDTDNDGRINYEEF MMR GT
Sbjct: 492 GDDATIDEVINDVDTDNDGRINYEEFVAMMRKGT 525
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 544 | ||||||
| 255554893 | 551 | calcium-dependent protein kinase, putati | 0.994 | 0.981 | 0.767 | 0.0 | |
| 449433950 | 552 | PREDICTED: calcium-dependent protein kin | 0.979 | 0.965 | 0.754 | 0.0 | |
| 289413843 | 556 | calcium-dependent protein kinase 1 [Heve | 0.994 | 0.973 | 0.762 | 0.0 | |
| 59709746 | 556 | calcium-dependent calmodulin-independent | 0.987 | 0.965 | 0.765 | 0.0 | |
| 84468312 | 558 | putative calcium dependent protein kinas | 0.985 | 0.960 | 0.743 | 0.0 | |
| 356521991 | 529 | PREDICTED: calcium-dependent protein kin | 0.970 | 0.998 | 0.757 | 0.0 | |
| 224078616 | 532 | calcium dependent protein kinase 15 [Pop | 0.972 | 0.994 | 0.763 | 0.0 | |
| 267631890 | 549 | calcium-dependent protein kinase 1 [Pana | 0.990 | 0.981 | 0.773 | 0.0 | |
| 357480283 | 539 | Calcium-dependent protein kinase [Medica | 0.977 | 0.987 | 0.754 | 0.0 | |
| 302144141 | 514 | unnamed protein product [Vitis vinifera] | 0.944 | 1.0 | 0.770 | 0.0 |
| >gi|255554893|ref|XP_002518484.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223542329|gb|EEF43871.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/554 (76%), Positives = 476/554 (85%), Gaps = 13/554 (2%)
Query: 1 MGCWGSKER-VPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAP 59
MGC GSKE+ P + NGYR + +S Q + QQQ + P++ A
Sbjct: 1 MGCCGSKEKPSKPKNDNGYRPANTGNSRPQQQQQQPQYPQQWDLQQQNLI---IPQIQAQ 57
Query: 60 QPQPRQQPMKSSATST---------RPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGIT 110
+PQ + + S +PVQKPET+LGKPL+DIRQFYTLGKELGRGQFGIT
Sbjct: 58 KPQAKPSQPQPSTPPPVKPAPAPIIKPVQKPETILGKPLDDIRQFYTLGKELGRGQFGIT 117
Query: 111 YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170
YLCTENSTG++YACKSILKRKL++K DREDIK+E+QIMQHLSGQ NIVEFRGAYEDRQSV
Sbjct: 118 YLCTENSTGHTYACKSILKRKLISKSDREDIKKEVQIMQHLSGQPNIVEFRGAYEDRQSV 177
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
HLVMELC+GGELFD+IIA+GHY+E+ AA +C+ IVNVVH CHFMGV+HRDLKPENFLL++
Sbjct: 178 HLVMELCAGGELFDRIIAKGHYSERDAARICKDIVNVVHACHFMGVIHRDLKPENFLLAS 237
Query: 231 KDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILL 290
KD GA LKATDFGLSVFI+EGK YRD VGSAYYVAPEVL RSYGKEIDVWSAGVILYILL
Sbjct: 238 KDEGATLKATDFGLSVFIEEGKTYRDKVGSAYYVAPEVLSRSYGKEIDVWSAGVILYILL 297
Query: 291 SGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
SGVPPFWAETE GIFDAIL+G +DFES+PW ISDSAKDL+R+ML QDPKKRITSA+VL+
Sbjct: 298 SGVPPFWAETENGIFDAILQGDIDFESKPWPSISDSAKDLIRRMLTQDPKKRITSAQVLD 357
Query: 351 HPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMD 410
HPW+++GG ASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE+LSEEEIKGLK MF NMD
Sbjct: 358 HPWIKDGGAASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKVMFRNMD 417
Query: 411 TDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470
TDKSGTITYEELKTGLARLGS+LSETEVKQLM+AADVDGNGTIDYIEFISATMHRYRLER
Sbjct: 418 TDKSGTITYEELKTGLARLGSRLSETEVKQLMEAADVDGNGTIDYIEFISATMHRYRLER 477
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFC 530
DEHLYKAFQ+FDKD+SGYITRDELE+AMK+YG+GDEA+IKEIISEVDTDNDGRINYEEFC
Sbjct: 478 DEHLYKAFQHFDKDSSGYITRDELESAMKEYGMGDEATIKEIISEVDTDNDGRINYEEFC 537
Query: 531 TMMRSGTPQPAKLI 544
MMRSG Q KL
Sbjct: 538 AMMRSGIQQAEKLF 551
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433950|ref|XP_004134759.1| PREDICTED: calcium-dependent protein kinase 21-like [Cucumis sativus] gi|449479449|ref|XP_004155602.1| PREDICTED: calcium-dependent protein kinase 21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/563 (75%), Positives = 474/563 (84%), Gaps = 30/563 (5%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
MGC S + P S +NG+ S ATG+AT+ PYQ YQ Q P K+SAPQ
Sbjct: 1 MGCCSSTQMPPSSGVNGFDS--------ATGIATRGPYQAYQPQSTVP---TPHKVSAPQ 49
Query: 61 ---PQPR---------QQPMKSSATSTRPVQKP-------ETVLGKPLEDIRQFYTLGKE 101
P R + P +SA S V P ET+LG+P +DI+++YTLGKE
Sbjct: 50 TQIPSSRNQPQPPPPAEHPTSASAFSKPAVSTPRTAQNYPETILGRPYDDIKKYYTLGKE 109
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LGRGQFGITYLCTENSTG +YACKSILKRKL++K D++D+KREI I+QHLSGQ NIVEF+
Sbjct: 110 LGRGQFGITYLCTENSTGQTYACKSILKRKLISKNDKDDMKREILILQHLSGQPNIVEFK 169
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
GAYEDR SVHLVMELC+GGELFD+IIA+G Y+EKAAA +CRAIVNVV CHFMGVMHRDL
Sbjct: 170 GAYEDRYSVHLVMELCAGGELFDRIIAKGQYSEKAAADICRAIVNVVQICHFMGVMHRDL 229
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPENFLL++K AMLKATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRR+YGKEIDVWS
Sbjct: 230 KPENFLLASKKEDAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRNYGKEIDVWS 289
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
AGVILYILLSGVPPFWAE EKGIFDAIL+G +DF S PW IS+SAKDLVRKML QDPKK
Sbjct: 290 AGVILYILLSGVPPFWAENEKGIFDAILQGDIDFASAPWPTISESAKDLVRKMLTQDPKK 349
Query: 342 RITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKG 401
RIT A+VLEH W+REGGEASDKPI +AVLSRMKQFRAMNKLKK+ALKVIAE LSEEEIKG
Sbjct: 350 RITPAQVLEHQWIREGGEASDKPIDNAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKG 409
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
LK MFAN+DTD SGTITYEELKTGLARLGS+LSE EVKQLM+AADVDGNG+IDYIEFISA
Sbjct: 410 LKAMFANIDTDNSGTITYEELKTGLARLGSRLSEAEVKQLMEAADVDGNGSIDYIEFISA 469
Query: 462 TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDND 521
TMHR+RLERDEHLYKAFQ+FDKD+SGYIT+DELETAMKDYG+GDEASI+EIISEVDTDND
Sbjct: 470 TMHRHRLERDEHLYKAFQFFDKDSSGYITKDELETAMKDYGMGDEASIREIISEVDTDND 529
Query: 522 GRINYEEFCTMMRSGTPQPAKLI 544
GRINY+EFC MMRSGT QP KL
Sbjct: 530 GRINYQEFCAMMRSGTTQPGKLF 552
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|289413843|gb|ACB71246.2| calcium-dependent protein kinase 1 [Hevea brasiliensis] | Back alignment and taxonomy information |
|---|
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/559 (76%), Positives = 471/559 (84%), Gaps = 18/559 (3%)
Query: 1 MGCWGSKERVPPSDMN-GYRSS-------------TAHSSHQATGVATQTPYQTYQQQQQ 46
MGC SKE+ S+ N GYRS A Q P T Q Q
Sbjct: 1 MGCCSSKEKPSKSEANKGYRSGGTGNLRQNQQQQSYYQQPEYQQQQAVQHPKMTVPQTQT 60
Query: 47 QQLHVQPPKMSAPQPQP-RQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRG 105
Q +P + A P P R P +A R VQ P+T+LGKPLEDI+Q+Y+LGKELGRG
Sbjct: 61 QTPQTRPQQPQASTPPPVRAAPTNLTA---RSVQTPQTILGKPLEDIKQYYSLGKELGRG 117
Query: 106 QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165
QFG+TYLCTENSTG+ YACKSILKRKL+NK DREDIKRE+QIMQHLSGQ NIVEFRG+YE
Sbjct: 118 QFGVTYLCTENSTGHIYACKSILKRKLINKGDREDIKREVQIMQHLSGQPNIVEFRGSYE 177
Query: 166 DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225
DRQSVH+VMELC+GGELFD+IIA+GHY+E+ AA +C+ IVNVVH CHFMGVMHRDLKPEN
Sbjct: 178 DRQSVHVVMELCAGGELFDRIIAKGHYSERDAARICKDIVNVVHACHFMGVMHRDLKPEN 237
Query: 226 FLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVI 285
FLL++KD GAMLK TDFGLSVFI+EGK YR+IVGSAYYVAPEVLRRSYGKEID+WSAGVI
Sbjct: 238 FLLASKDEGAMLKTTDFGLSVFIEEGKTYRNIVGSAYYVAPEVLRRSYGKEIDIWSAGVI 297
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LYILLSGVPPFWAETEKGIFDAIL+G +DFES PW ISDSAKDLVR+ML QDPK+RITS
Sbjct: 298 LYILLSGVPPFWAETEKGIFDAILEGYIDFESSPWPSISDSAKDLVRRMLTQDPKRRITS 357
Query: 346 AEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTM 405
A+VL+HPW+++GG ASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE LSEEEIKGLK M
Sbjct: 358 AQVLDHPWIKDGGAASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAM 417
Query: 406 FANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR 465
F NMDTDKSGTITYEELKTGLARLGS+LSETEVKQLM+AADVDGNG IDYIEFISATMHR
Sbjct: 418 FTNMDTDKSGTITYEELKTGLARLGSRLSETEVKQLMEAADVDGNGAIDYIEFISATMHR 477
Query: 466 YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRIN 525
YRLERDEHLYKAFQYFDKD+SGYITRDELE+AM +YG+GDEASIKEIISEVDTDNDG+IN
Sbjct: 478 YRLERDEHLYKAFQYFDKDSSGYITRDELESAMMEYGMGDEASIKEIISEVDTDNDGKIN 537
Query: 526 YEEFCTMMRSGTPQPAKLI 544
YEEFCTMMR G QP KL
Sbjct: 538 YEEFCTMMRRGVQQPGKLF 556
|
Source: Hevea brasiliensis Species: Hevea brasiliensis Genus: Hevea Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|59709746|gb|AAP72281.2| calcium-dependent calmodulin-independent protein kinase isoform 1 [Cicer arietinum] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/547 (76%), Positives = 472/547 (86%), Gaps = 10/547 (1%)
Query: 1 MGCWGSKERVPPS-DMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAP 59
MGC GSKE+ P+ D ++ ++ A+GVAT Y Q HVQ P
Sbjct: 1 MGCQGSKEKNKPTPDFTARHHGSSATAASASGVATNN--HQYHSVQPSSTHVQ-----TP 53
Query: 60 QPQPRQQPMKSSAT-STRPVQKPET-VLGKPLEDIRQFYTLGKELGRGQFGITYLCTENS 117
P+P P + T + + V K +T +LGKP +DI++ YTLG+ELGRGQFGITY CTENS
Sbjct: 54 PPKPDSNPKPTVTTQNVKTVHKTDTTILGKPFDDIKKHYTLGQELGRGQFGITYFCTENS 113
Query: 118 TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177
TGN+YACKSILKRKLV+K DREDIKREIQI+QHLSGQ NIVEF+GAYEDR SVHLVMELC
Sbjct: 114 TGNTYACKSILKRKLVSKSDREDIKREIQILQHLSGQPNIVEFKGAYEDRFSVHLVMELC 173
Query: 178 SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237
+GGELFD+IIAQGHY+E+AAA++CRA+VNVVH CHFMGV+HRDLKPENFLLS+KD GA L
Sbjct: 174 AGGELFDRIIAQGHYSERAAASICRAVVNVVHICHFMGVLHRDLKPENFLLSSKDEGATL 233
Query: 238 KATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFW 297
KATDFGLSVFI+EGKVYRD+VGSAYYVAPEVLRRSYGKEID+WSAG+ILYILLSGVPPFW
Sbjct: 234 KATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFW 293
Query: 298 AETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
AETEKGIF+AIL+G +DF SEPW ISDSAKDLVRKML DPKKRITSA+VLEHPWMREG
Sbjct: 294 AETEKGIFNAILEGELDFASEPWPSISDSAKDLVRKMLNHDPKKRITSAQVLEHPWMREG 353
Query: 358 GEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTI 417
GEASDKPI SAVLSRMKQFRAMNKLKK+ALK+IAE LSEEEIKGLK MFANMDTD SGTI
Sbjct: 354 GEASDKPIDSAVLSRMKQFRAMNKLKKLALKIIAENLSEEEIKGLKAMFANMDTDNSGTI 413
Query: 418 TYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKA 477
TYEELKTGLAR+GS+LSETEVKQLM+ ADVDGNG+IDY+EFISATMHR+RLERDEHLYKA
Sbjct: 414 TYEELKTGLARIGSRLSETEVKQLMELADVDGNGSIDYLEFISATMHRHRLERDEHLYKA 473
Query: 478 FQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
FQYFDKDNSG+ITR+ELETAM +G+GDEA+IK+IISEVDTD+DGRINYEEFC MMRSG
Sbjct: 474 FQYFDKDNSGHITREELETAMTQHGMGDEATIKDIISEVDTDHDGRINYEEFCAMMRSGM 533
Query: 538 PQPAKLI 544
P P I
Sbjct: 534 PPPGTTI 540
|
Source: Cicer arietinum Species: Cicer arietinum Genus: Cicer Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84468312|dbj|BAE71239.1| putative calcium dependent protein kinase [Trifolium pratense] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/566 (74%), Positives = 468/566 (82%), Gaps = 30/566 (5%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQT------YQQQQQQQLHVQPP 54
MGC GSKE +S+ HS H+ A T YQ Q HVQ
Sbjct: 1 MGCHGSKE--------AKKSAAEHSRHRHQSSAAAGGAATGGTNFQYQIVQPSSSHVQTS 52
Query: 55 KM---------------SAPQPQPRQQPMKSSATSTRPVQKPET-VLGKPLEDIRQFYTL 98
S P S++ + R VQKP+T +LGKP EDI++FYTL
Sbjct: 53 PPPKPKPESHSHSHSHASTVTTTTTSNPKPSASENVRTVQKPDTTILGKPFEDIKKFYTL 112
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIV 158
GKELGRGQFGITY CTENSTG +YACKSILKRKLV+K DREDIKREIQI+QHLSGQ NIV
Sbjct: 113 GKELGRGQFGITYFCTENSTGLNYACKSILKRKLVSKADREDIKREIQILQHLSGQPNIV 172
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
EF+GAYEDR SVHLVMELC+GGELFD+IIAQGHY+E+AAA++CRA+VNVVH CHFMGV+H
Sbjct: 173 EFKGAYEDRFSVHLVMELCAGGELFDRIIAQGHYSERAAASICRAVVNVVHICHFMGVLH 232
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEID 278
RDLKPENFLLS+KD GA LKATDFGLSVFI+EGKVYRD+VGSAYYVAPEVLRR+YGKEID
Sbjct: 233 RDLKPENFLLSSKDEGAALKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRNYGKEID 292
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
+WSAG+ILYILLSGVPPFWAETEKGIF+AIL+G +DF SEPW ISDSAKDLVRKML QD
Sbjct: 293 IWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTQD 352
Query: 339 PKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEE 398
PKKRITS +VLEHPWMREGGEASDKPI SAVLSRMKQFRAMNK KK+ALKV+AE LSEEE
Sbjct: 353 PKKRITSTQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEE 412
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
IKGLK MFANMDTD SGTITYEELK+GLAR+GS+LSE EVKQLM+AADVDGNG+IDY+EF
Sbjct: 413 IKGLKAMFANMDTDGSGTITYEELKSGLARIGSRLSEPEVKQLMEAADVDGNGSIDYLEF 472
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDT 518
ISATMHR+RLERDEHLYKAFQYFDKDNSG+ITR+ELETAM +G+GDEA+IKEIISEVDT
Sbjct: 473 ISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDT 532
Query: 519 DNDGRINYEEFCTMMRSGTPQPAKLI 544
DNDGRINYEEFC MMRSG P A+L
Sbjct: 533 DNDGRINYEEFCAMMRSGMPHQAQLF 558
|
Source: Trifolium pratense Species: Trifolium pratense Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521991|ref|XP_003529633.1| PREDICTED: calcium-dependent protein kinase 21-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/545 (75%), Positives = 463/545 (84%), Gaps = 17/545 (3%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
MGC GSKE+ +S+T++ S + Y VQP + Q
Sbjct: 1 MGCHGSKEK---------KSNTSYGSAATGSGSGSGSGGGYNT-------VQPSPPTTDQ 44
Query: 61 PQPR-QQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTG 119
Q Q P A+ T + +++GKP +DI+++Y++GKELGRGQFGITYLCTENS+G
Sbjct: 45 VQASAQTPENRKASPTVQKKADTSIVGKPFDDIKKYYSIGKELGRGQFGITYLCTENSSG 104
Query: 120 NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179
+YACKSILKRKLV+K DRED+KREIQIMQHLSGQ NIVEF+GA+EDR SVHLVMELCSG
Sbjct: 105 GTYACKSILKRKLVSKADREDMKREIQIMQHLSGQPNIVEFKGAFEDRFSVHLVMELCSG 164
Query: 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239
GELFD+IIAQGHY+E+AAA+LCR+IVNVVH CHFMGVMHRDLKPENFLLS KD A LKA
Sbjct: 165 GELFDRIIAQGHYSERAAASLCRSIVNVVHICHFMGVMHRDLKPENFLLSTKDDHATLKA 224
Query: 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAE 299
TDFGLSVFI++GKVY D+VGSAYYVAPEVLRRSYGKEID+WSAG+ILYILLSGVPPFWAE
Sbjct: 225 TDFGLSVFIEQGKVYHDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAE 284
Query: 300 TEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359
TEKGIF+AIL+G +DF SEPW ISDSAKDLVRKML QDPKKRITSA+VLEHPWMREGG+
Sbjct: 285 TEKGIFNAILEGEIDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGD 344
Query: 360 ASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITY 419
ASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE LSEEEIKGLK MFANMDTD SGTITY
Sbjct: 345 ASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDSSGTITY 404
Query: 420 EELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479
EELKTGLAR+GS+LSE EVKQLMDAADVDGNG+IDY+EFISATMHR+RLERDEHLYKAFQ
Sbjct: 405 EELKTGLARIGSRLSEAEVKQLMDAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQ 464
Query: 480 YFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539
YFDKDNSGYITRDELETAM +G+GDEA+IKEIISEVDTDNDGRINYEEFC MMRSG P
Sbjct: 465 YFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPH 524
Query: 540 PAKLI 544
+L+
Sbjct: 525 QGQLL 529
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224078616|ref|XP_002305576.1| calcium dependent protein kinase 15 [Populus trichocarpa] gi|222848540|gb|EEE86087.1| calcium dependent protein kinase 15 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/545 (76%), Positives = 463/545 (84%), Gaps = 16/545 (2%)
Query: 1 MGCWGSKERVPPSDMNG--YRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSA 58
MGC+ SKE+ P D+NG YR ST S Q Q+ + Q Q Q PP+
Sbjct: 1 MGCFSSKEKAPRPDVNGCTYRPSTTGYSRQQQPQYHQSQQKAVAPQIQTQ---SPPR--- 54
Query: 59 PQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENST 118
+PQ QQ T TRPV K +T+LGKP EDI+Q YTL KELGRGQFGITYLCTEN+T
Sbjct: 55 -RPQQTQQ-----KTPTRPVPKVDTILGKPFEDIKQLYTLSKELGRGQFGITYLCTENAT 108
Query: 119 GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178
G+SYACKSIL+RKLVNK+D +DIKRE+ IMQHLSGQ N VEFRG YED QSVHLVMELC+
Sbjct: 109 GHSYACKSILRRKLVNKKDGDDIKREVNIMQHLSGQPNTVEFRGVYEDSQSVHLVMELCA 168
Query: 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238
GGELFD+IIA+GHY+E+ AA + R IVNVVH CHFMGVMHRDLKPENFLLS+KD GA LK
Sbjct: 169 GGELFDRIIAKGHYSERDAAKIFREIVNVVHACHFMGVMHRDLKPENFLLSSKDEGASLK 228
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWA 298
ATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRRSYGKEID+WSAGVILYILLSGVPPFWA
Sbjct: 229 ATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWA 288
Query: 299 ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
E E+GIFDAIL+G +DFES+PW I++SAKDLVR+ML QDP KRITSA+VLEHPW+++GG
Sbjct: 289 ENERGIFDAILQGDIDFESQPWPSITNSAKDLVRRMLTQDPNKRITSAQVLEHPWIKDGG 348
Query: 359 EASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTIT 418
+D+PI SAVLSRMKQFRAMNKL K+ALKVIAE LSEEEIKGLK MF NMDTDKSGTIT
Sbjct: 349 --ADRPIDSAVLSRMKQFRAMNKLMKLALKVIAENLSEEEIKGLKAMFTNMDTDKSGTIT 406
Query: 419 YEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478
YEELKTGLARLGSKLSE EVK LM+AADVDGNG+IDYIEFISATMHRY+LERDEHLYKAF
Sbjct: 407 YEELKTGLARLGSKLSEAEVKNLMEAADVDGNGSIDYIEFISATMHRYKLERDEHLYKAF 466
Query: 479 QYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538
QYFDKD+SGYITRDELE AMK+YG+GDE+SIKEII+EVD DNDGRINYEEFC MMRSGTP
Sbjct: 467 QYFDKDSSGYITRDELELAMKEYGMGDESSIKEIIAEVDADNDGRINYEEFCAMMRSGTP 526
Query: 539 QPAKL 543
L
Sbjct: 527 HAPSL 531
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|267631890|gb|ACY78680.1| calcium-dependent protein kinase 1 [Panax ginseng] | Back alignment and taxonomy information |
|---|
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/543 (77%), Positives = 470/543 (86%), Gaps = 4/543 (0%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSS--HQATGVATQTPYQTYQQQQQQQLHVQPPKMSA 58
MG SK++ +D+NGYRS + +G + P Y Q Q+ H P+
Sbjct: 1 MGGCASKKQDYQADVNGYRSGRNGGTGYQTVSGQGYEKPSTQYNPTQPQRPHQTQPQPQP 60
Query: 59 PQPQPRQQPMKSSATSTRPVQKPE--TVLGKPLEDIRQFYTLGKELGRGQFGITYLCTEN 116
QP P + S RPV KPE T+LGK EDIR YTLGKELGRGQFG+TYLCTE
Sbjct: 61 KQPAPAPLKPAAHNPSPRPVHKPEPNTILGKKFEDIRAHYTLGKELGRGQFGVTYLCTEI 120
Query: 117 STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176
S+G+ YACKSILKRKLV+K D+ED+KREIQIMQHLSGQ +IVEF+GAYEDRQSVHLVMEL
Sbjct: 121 SSGHFYACKSILKRKLVSKNDKEDMKREIQIMQHLSGQPDIVEFKGAYEDRQSVHLVMEL 180
Query: 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236
C+GGELFD+IIAQGHY+E+AAA +CR IVNVVH CHFMGVMHRDLKPENFLLS+K+ GAM
Sbjct: 181 CAGGELFDRIIAQGHYSERAAATICRQIVNVVHVCHFMGVMHRDLKPENFLLSSKNEGAM 240
Query: 237 LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPF 296
LKATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRRSYGKEID+WSAGVILYILLSGVPPF
Sbjct: 241 LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPF 300
Query: 297 WAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
WAE EKGIFDAIL+G +DFES+PW IS+SAKDLVRKML QDP++RITSA+VLEHPWMRE
Sbjct: 301 WAENEKGIFDAILEGVIDFESQPWPSISNSAKDLVRKMLTQDPRRRITSAQVLEHPWMRE 360
Query: 357 GGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGT 416
GGEASDKPI SAVLSRMKQFRAMNKLKK+ALK IAE+LSEEEIKGLK MF N+DTD SGT
Sbjct: 361 GGEASDKPIDSAVLSRMKQFRAMNKLKKLALKGIAESLSEEEIKGLKAMFTNIDTDNSGT 420
Query: 417 ITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476
ITYEELK+GLARLGSKLSE EV+QLM+AADVDGNGTIDYIEFI+ATMHR++LERDEHLYK
Sbjct: 421 ITYEELKSGLARLGSKLSEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDEHLYK 480
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
AFQYFDKD+SG+ITRDELE+AMK+YG+GDEA+IKEIISEVDTDNDGRINYEEFCTMMRSG
Sbjct: 481 AFQYFDKDSSGFITRDELESAMKEYGMGDEATIKEIISEVDTDNDGRINYEEFCTMMRSG 540
Query: 537 TPQ 539
T Q
Sbjct: 541 TTQ 543
|
Source: Panax ginseng Species: Panax ginseng Genus: Panax Family: Araliaceae Order: Apiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357480283|ref|XP_003610427.1| Calcium-dependent protein kinase [Medicago truncatula] gi|355511482|gb|AES92624.1| Calcium-dependent protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/551 (75%), Positives = 462/551 (83%), Gaps = 19/551 (3%)
Query: 1 MGCWGSKERVPPSD--MNGYRSSTAHSS---HQATGVATQTPYQTYQQQQQQQLHVQPPK 55
MGC GSKE+ D RSS A + + GV + Y Q QQ
Sbjct: 1 MGCHGSKEKKHAKDEFTARQRSSPARPTAPPSRPAGVDSNFRYINVPPQVQQS------- 53
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKP--ETVLGKPLEDIRQFYTLGKELGRGQFGITYLC 113
P P S+ T+ +PVQ+ T+LGKP EDI++FYTLGKELGRGQFGITY C
Sbjct: 54 -----STPSSNPKPSAITTQKPVQQKVDTTILGKPYEDIKKFYTLGKELGRGQFGITYFC 108
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173
TENSTG +YACKSILKRKLV+K DREDIKREIQI+QHLSGQ NIVEF+GA+EDR SVHLV
Sbjct: 109 TENSTGLNYACKSILKRKLVSKADREDIKREIQILQHLSGQPNIVEFKGAFEDRFSVHLV 168
Query: 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233
MELC+GGELFD+IIAQGHY+E+AAA++CR +V VVH CHFMGV+HRDLKPENFLLS+KD
Sbjct: 169 MELCAGGELFDRIIAQGHYSERAAASICRDVVKVVHICHFMGVLHRDLKPENFLLSSKDD 228
Query: 234 GAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGV 293
GA LKATDFGLSVFI+EGKVYRD+VGSAYYVAPEVLRR+YGKEID+WSAG+ILYILLSGV
Sbjct: 229 GAALKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGV 288
Query: 294 PPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
PPFWAETEKGIF+AIL+G +DF SEPW ISDSAKDLVRKML DPKKRITS EVLEHPW
Sbjct: 289 PPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTPDPKKRITSTEVLEHPW 348
Query: 354 MREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDK 413
MREGGEASDKPI SAVLSRMKQFRAMNK KK+ALKV+AE LSEEEIKGLK MFANMDTD
Sbjct: 349 MREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDS 408
Query: 414 SGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473
SGTITYEELKTGLAR+GS+LSE EVKQLM+AADVDGNG+IDY+EFISATMHR+RLERDEH
Sbjct: 409 SGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEH 468
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533
LYKAFQYFDKDNSG+ITR+ELETAM +G+GDEA+IKEIISEVDTDNDGRINYEEFC MM
Sbjct: 469 LYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMM 528
Query: 534 RSGTPQPAKLI 544
RSG P L
Sbjct: 529 RSGMPHQGPLF 539
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302144141|emb|CBI23246.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/544 (77%), Positives = 464/544 (85%), Gaps = 30/544 (5%)
Query: 1 MGCWGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQ 60
MGC+ SKERV D+ G RS P QTY Q Q
Sbjct: 1 MGCFSSKERVTERDIKGGRSERG------------APTQTYHQPPPQPP----------- 37
Query: 61 PQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGN 120
+K S +TR +QKP+T+LG+P +DI+ +YTLGKELGRGQFG+TYLCT+NSTGN
Sbjct: 38 -------LKPSHPNTRAIQKPDTILGRPFDDIKHYYTLGKELGRGQFGVTYLCTQNSTGN 90
Query: 121 SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG 180
+YACKSILKRKLV K D+EDIKREIQIMQHL+GQ NIVEF+GAYEDR SVHLVMELC+GG
Sbjct: 91 TYACKSILKRKLVTKNDKEDIKREIQIMQHLTGQPNIVEFKGAYEDRHSVHLVMELCAGG 150
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
ELFD+II+QGHY+E+AAAA+CRAIVNVVH CHFMGVMHRDLKPENFLLS+KD AMLKAT
Sbjct: 151 ELFDRIISQGHYSERAAAAICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEAAMLKAT 210
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAET 300
DFGLSVFI+EGKVYRDIVGSAYYVAPEVLRR+YGKEID+WSAGVILYILLSGVPPFWAET
Sbjct: 211 DFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRNYGKEIDIWSAGVILYILLSGVPPFWAET 270
Query: 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
EKGIFDAIL+G +DFES+PW IS+ AKDLVRKML QD KRITSA+VLEHPW+RE GEA
Sbjct: 271 EKGIFDAILQGEIDFESQPWPAISNGAKDLVRKMLTQDRNKRITSAQVLEHPWIREDGEA 330
Query: 361 SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYE 420
SDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE LSEEEIKGLK MF NMDTDKSGTITYE
Sbjct: 331 SDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDKSGTITYE 390
Query: 421 ELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480
ELK+GLARLGS+LSETEV+QLM+AADVDGNGTIDYIEFI+ATMHR+RLERDEHLYKAF Y
Sbjct: 391 ELKSGLARLGSRLSETEVQQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFNY 450
Query: 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
FDKDNSG+ITRDELE AMK+YG+GDE SIKEII+EVDTD DGRINY+EFCTMMRSGT P
Sbjct: 451 FDKDNSGFITRDELENAMKEYGMGDEDSIKEIINEVDTDKDGRINYKEFCTMMRSGTQPP 510
Query: 541 AKLI 544
KL
Sbjct: 511 VKLF 514
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 544 | ||||||
| TAIR|locus:2138897 | 531 | CPK21 "calcium-dependent prote | 0.908 | 0.930 | 0.794 | 4e-216 | |
| TAIR|locus:2092399 | 541 | CPK9 "calmodulin-domain protei | 0.897 | 0.902 | 0.751 | 4.4e-203 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.893 | 0.932 | 0.741 | 1e-201 | |
| TAIR|locus:2036783 | 551 | CPK19 "calcium-dependent prote | 0.908 | 0.896 | 0.719 | 4.3e-196 | |
| TAIR|locus:2204340 | 561 | CPK29 "calcium-dependent prote | 0.891 | 0.864 | 0.695 | 2.9e-183 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.889 | 0.916 | 0.665 | 5.7e-178 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.856 | 0.891 | 0.686 | 3.1e-177 | |
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.856 | 0.880 | 0.680 | 2e-175 | |
| TAIR|locus:504955360 | 484 | CPK31 "calcium-dependent prote | 0.851 | 0.956 | 0.658 | 4.5e-162 | |
| TAIR|locus:2827528 | 544 | CPK6 "calcium dependent protei | 0.830 | 0.830 | 0.649 | 7.5e-160 |
| TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2088 (740.1 bits), Expect = 4.0e-216, P = 4.0e-216
Identities = 399/502 (79%), Positives = 454/502 (90%)
Query: 50 HVQPP--KMSAPQPQPRQQPMKS--SATSTRPV--QKPETVLGKPLEDIRQFYTLGKELG 103
HV P K P P+P QP+ S S+ PV + P+T+LGKP EDIR+FY+LGKELG
Sbjct: 28 HVVPEHRKPQTPTPKPMTQPIHQQISTPSSNPVSVRDPDTILGKPFEDIRKFYSLGKELG 87
Query: 104 RGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA 163
RGQFGITY+C E TGN+YACKSILKRKL++KQD+ED+KREIQIMQ+LSGQ NIVE +GA
Sbjct: 88 RGQFGITYMCKEIGTGNTYACKSILKRKLISKQDKEDVKREIQIMQYLSGQPNIVEIKGA 147
Query: 164 YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKP 223
YEDRQS+HLVMELC+GGELFD+IIAQGHY+E+AAA + R+IVNVV CHFMGV+HRDLKP
Sbjct: 148 YEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKP 207
Query: 224 ENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAG 283
ENFLLS+K+ AMLKATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRRSYGKEID+WSAG
Sbjct: 208 ENFLLSSKEENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAG 267
Query: 284 VILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI 343
VILYILLSGVPPFWAE EKGIFD ++KG +DF SEPW IS+SAKDLVRKML +DPK+RI
Sbjct: 268 VILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRI 327
Query: 344 TSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLK 403
T+A+VLEHPW++ GGEA DKPI SAVLSRMKQFRAMNKLKK+ALKVIAE+LSEEEIKGLK
Sbjct: 328 TAAQVLEHPWIK-GGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLK 386
Query: 404 TMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463
TMFAN+DTDKSGTITYEELKTGL RLGS+LSETEVKQLM+AADVDGNGTIDY EFISATM
Sbjct: 387 TMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATM 446
Query: 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGR 523
HRY+L+RDEH+YKAFQ+FDKDNSG+ITRDELE+AMK+YG+GDEASIKE+ISEVDTDNDGR
Sbjct: 447 HRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGR 506
Query: 524 INYEEFCTMMRSGTPQP-AKLI 544
IN+EEFC MMRSG+ QP KL+
Sbjct: 507 INFEEFCAMMRSGSTQPQGKLL 528
|
|
| TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1965 (696.8 bits), Expect = 4.4e-203, P = 4.4e-203
Identities = 368/490 (75%), Positives = 433/490 (88%)
Query: 52 QPPKMSA--PQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGI 109
QP K + QP P + + S + K ++L ED++ FYTLGKELGRGQFG+
Sbjct: 45 QPEKPGSVNSQPPPWRAAAAAPGLSPKTTTKSNSILENAFEDVKLFYTLGKELGRGQFGV 104
Query: 110 TYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169
TYLCTENSTG YACKSI K+KLV K D++D++REIQIMQHLSGQ NIVEF+GAYED ++
Sbjct: 105 TYLCTENSTGKKYACKSISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKA 164
Query: 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229
V+LVMELC+GGELFD+IIA+GHYTE+AAA++CR IVNVV CHFMGV+HRDLKPENFLLS
Sbjct: 165 VNLVMELCAGGELFDRIIAKGHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLS 224
Query: 230 NKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYIL 289
+KD A++KATDFGLSVFI+EGKVYRDIVGSAYYVAPEVLRR YGKE+D+WSAG+ILYIL
Sbjct: 225 SKDEKALIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEVDIWSAGIILYIL 284
Query: 290 LSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
LSGVPPFWAETEKGIFDAIL+G +DFES+PW IS SAKDLVR+ML DPK+RI++A+VL
Sbjct: 285 LSGVPPFWAETEKGIFDAILEGHIDFESQPWPSISSSAKDLVRRMLTADPKRRISAADVL 344
Query: 350 EHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANM 409
+HPW+REGGEASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE + EEI+GLK MFAN+
Sbjct: 345 QHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANI 404
Query: 410 DTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE 469
DTD SGTITYEELK GLA+LGSKL+E EVKQLMDAADVDGNG+IDYIEFI+ATMHR+RLE
Sbjct: 405 DTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLE 464
Query: 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEF 529
+E+LYKAFQ+FDKD+SGYIT DELE+A+K+YG+GD+A+IKE++S+VD+DNDGRINYEEF
Sbjct: 465 SNENLYKAFQHFDKDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEEF 524
Query: 530 CTMMRSGTPQ 539
C MMRSG PQ
Sbjct: 525 CAMMRSGNPQ 534
|
|
| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1952 (692.2 bits), Expect = 1.0e-201, P = 1.0e-201
Identities = 368/496 (74%), Positives = 435/496 (87%)
Query: 50 HVQPPKMSAP--QPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQF 107
H P K+S QP P + P K S + +L KP ED++ FYTL KELGRGQF
Sbjct: 33 HQDPSKISTGTNQPPPWRNPAKHSGAAA--------ILEKPYEDVKLFYTLSKELGRGQF 84
Query: 108 GITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167
G+TYLCTE STG +ACKSI K+KLV K D+ED++REIQIMQHLSGQ NIVEF+GAYED
Sbjct: 85 GVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDE 144
Query: 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227
++V+LVMELC+GGELFD+I+A+GHY+E+AAA++CR IVNVV+ CHFMGVMHRDLKPENFL
Sbjct: 145 KAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFL 204
Query: 228 LSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILY 287
LS+KD A++KATDFGLSVFI+EG+VY+DIVGSAYYVAPEVL+R YGKEID+WSAG+ILY
Sbjct: 205 LSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYYVAPEVLKRRYGKEIDIWSAGIILY 264
Query: 288 ILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
ILLSGVPPFWAETEKGIFDAIL+G +DFES+PW IS+SAKDLVR+ML QDPK+RI++AE
Sbjct: 265 ILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAE 324
Query: 348 VLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFA 407
VL+HPW+REGGEASDKPI SAVLSRMKQFRAMNKLKK+ALKVIAE + EEI+GLK MFA
Sbjct: 325 VLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFA 384
Query: 408 NMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR 467
N+DTD SGTITYEELK GLA+LGS+L+E EVKQLMDAADVDGNG+IDYIEFI+ATMHR+R
Sbjct: 385 NIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHR 444
Query: 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYE 527
LE +E++YKAFQ+FDKD SGYIT DELE A+K+YG+GD+A+IKEI+S+VD DNDGRINY+
Sbjct: 445 LESNENVYKAFQHFDKDGSGYITTDELEAALKEYGMGDDATIKEILSDVDADNDGRINYD 504
Query: 528 EFCTMMRSGTPQPAKL 543
EFC MMRSG PQ +L
Sbjct: 505 EFCAMMRSGNPQQPRL 520
|
|
| TAIR|locus:2036783 CPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1899 (673.5 bits), Expect = 4.3e-196, P = 4.3e-196
Identities = 357/496 (71%), Positives = 428/496 (86%)
Query: 51 VQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGIT 110
VQP K+ P PQP+++ + +Q+PE +LG+P EDI++ Y+LG+ELGRGQFGIT
Sbjct: 53 VQPHKLPLPLPQPQEKQKLINHQKQSTLQQPEPILGRPFEDIKEKYSLGRELGRGQFGIT 112
Query: 111 YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170
Y+CTE S+G ++ACKSILKRKL+ +DRED++REIQIM +LSGQ NIVE +GAYEDRQSV
Sbjct: 113 YICTEISSGKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSV 172
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
HLVMELC GGELFDKI +GHY+EKAAA + R++V VV CHFMGV+HRDLKPENFLLS+
Sbjct: 173 HLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSS 232
Query: 231 KD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYIL 289
KD +MLKATDFG+SVFI+EGKVY DIVGSAYYVAPEVL+R+YGK ID+WSAGVILYIL
Sbjct: 233 KDEASSMLKATDFGVSVFIEEGKVYEDIVGSAYYVAPEVLKRNYGKAIDIWSAGVILYIL 292
Query: 290 LSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
L G PPFWAET+KGIF+ IL+G +DFESEPW IS+SAKDLVR ML DPKKR T+A+VL
Sbjct: 293 LCGNPPFWAETDKGIFEEILRGEIDFESEPWPSISESAKDLVRNMLKYDPKKRFTAAQVL 352
Query: 350 EHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANM 409
EHPW+REGGEASDKPI SAVLSRMKQ RAMNKLKK+A K IA+ L EEE+KGLKTMFANM
Sbjct: 353 EHPWIREGGEASDKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFANM 412
Query: 410 DTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE 469
DTDKSGTITY+ELK+GL +LGS+L+ETEVKQL++ ADVDGNGTIDYIEFISATM+R+R+E
Sbjct: 413 DTDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVE 472
Query: 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEF 529
R+++L+KAFQ+FDKDNSG+I+R ELETAMK+Y +GD+ IKEIISEVD DNDG INY+EF
Sbjct: 473 REDNLFKAFQHFDKDNSGFISRQELETAMKEYNMGDDIMIKEIISEVDADNDGSINYQEF 532
Query: 530 CTMMRS-GTPQPAKLI 544
C MM+S +KL+
Sbjct: 533 CNMMKSCSQSHQSKLV 548
|
|
| TAIR|locus:2204340 CPK29 "calcium-dependent protein kinase 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1778 (630.9 bits), Expect = 2.9e-183, P = 2.9e-183
Identities = 340/489 (69%), Positives = 410/489 (83%)
Query: 57 SAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTEN 116
S PQP+P+ P +TS+ P +L +P+ D+ Y L KELGRGQFGITY CT+
Sbjct: 75 SNPQPKPKPAPPPPPSTSSGSQIGP--ILNRPMIDLSALYDLHKELGRGQFGITYKCTDK 132
Query: 117 STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176
S G YACKSI KRKL+ ++D ED++RE+ I+QHL+GQ NIVEFRGAYED+ ++HLVMEL
Sbjct: 133 SNGREYACKSISKRKLIRRKDIEDVRREVMILQHLTGQPNIVEFRGAYEDKDNLHLVMEL 192
Query: 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236
CSGGELFD+II +G Y+EK AA + R IVNVVH CHFMGV+HRDLKPENFLL + + +
Sbjct: 193 CSGGELFDRIIKKGSYSEKEAANIFRQIVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSP 252
Query: 237 LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPF 296
+KATDFGLSVFI+EGKVYRDIVGSAYYVAPEVL R+YGKEIDVWSAGV+LYILLSGVPPF
Sbjct: 253 IKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLHRNYGKEIDVWSAGVMLYILLSGVPPF 312
Query: 297 WAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W ETEK IF+AIL+G +D E+ PW IS+SAKDL+RKMLI+DPKKRIT+AE LEHPWM +
Sbjct: 313 WGETEKTIFEAILEGKLDLETSPWPTISESAKDLIRKMLIRDPKKRITAAEALEHPWMTD 372
Query: 357 GGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGT 416
+ SDKPI SAVL RMKQFRAMNKLKK+ALKVIAE LSEEEIKGLK F NMDTD+SGT
Sbjct: 373 T-KISDKPINSAVLVRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKQTFKNMDTDESGT 431
Query: 417 ITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476
IT++EL+ GL RLGSKL+E+E+KQLM+AADVD +GTIDYIEF++ATMHR+RLE++E+L +
Sbjct: 432 ITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIE 491
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
AF+YFDKD SG+ITRDEL+ +M +YG+GD+A+I E+I++VDTDNDGRINYEEF MMR G
Sbjct: 492 AFKYFDKDRSGFITRDELKHSMTEYGMGDDATIDEVINDVDTDNDGRINYEEFVAMMRKG 551
Query: 537 TPQP-AKLI 544
T KLI
Sbjct: 552 TTDSDPKLI 560
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 325/488 (66%), Positives = 397/488 (81%)
Query: 54 PKMSAPQPQPRQQPMKSS-ATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYL 112
P A PQ + P AT P+ P VLG+P+ED++ Y+LGKELGRGQFG+T+L
Sbjct: 33 PTAEASVPQSKHAPPSPPPATKQGPIG-P--VLGRPMEDVKASYSLGKELGRGQFGVTHL 89
Query: 113 CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172
CT+ +TG+ +ACK+I KRKLVNK+D ED++RE+QIM HL+GQ NIVE +GAYED+ SVHL
Sbjct: 90 CTQKATGHQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHL 149
Query: 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD 232
VMELC+GGELFD+IIA+GHY+E+AAA+L R IV +VH CH MGV+HRDLKPENFLL NKD
Sbjct: 150 VMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKD 209
Query: 233 GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSG 292
+ LKATDFGLSVF G+V++DIVGSAYY+APEVL+R YG E D+WS GV+LYILL G
Sbjct: 210 ENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCG 269
Query: 293 VPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
VPPFWAE+E GIF+AIL+G VDF S+PW IS AKDLV+KML DPK+R+T+A+VL HP
Sbjct: 270 VPPFWAESENGIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHP 329
Query: 353 WMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTD 412
W++E GEA D P+ +AV+SR+KQF+AMN KK+AL+VIA LSEEEI GLK MF MDTD
Sbjct: 330 WIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTD 389
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472
SGTIT EEL+ GLA+ G++LSE EV+QLM+AAD DGNGTIDY EFI+ATMH RL+R+E
Sbjct: 390 SSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE 449
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTM 532
HLY AFQ+FDKDNSGYIT +ELE A++++G+ D IKEIISEVD DNDGRINY+EF M
Sbjct: 450 HLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYDEFVAM 509
Query: 533 MRSGTPQP 540
MR G P P
Sbjct: 510 MRKGNPDP 517
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| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1721 (610.9 bits), Expect = 3.1e-177, P = 3.1e-177
Identities = 322/469 (68%), Positives = 390/469 (83%)
Query: 72 ATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRK 131
AT P+ P VLG+P+ED++ YTLGKELGRGQFG+T+LCT+ +TG +ACK+I KRK
Sbjct: 47 ATKQGPIG-P--VLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRK 103
Query: 132 LVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH 191
LVNK+D ED++RE+QIM HL+GQ NIVE +GAYED+ SVHLVMELC+GGELFD+IIA+GH
Sbjct: 104 LVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGH 163
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
Y+E+AAA+L R IV ++H CH MGV+HRDLKPENFLL +KD + LKATDFGLSVF G
Sbjct: 164 YSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPG 223
Query: 252 KVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
+V++DIVGSAYY+APEVLRR YG E D+WS GV+LYILL GVPPFWAE+E GIF+AIL G
Sbjct: 224 EVFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSG 283
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLS 371
VDF S+PW +IS AKDLVRKML DPK+R+T+A+VL HPW++E GEA D P+ +AV+S
Sbjct: 284 QVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMS 343
Query: 372 RMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS 431
R+KQF+AMN KK+AL+VIA LSEEEI GLK MF MDTD SGTIT EEL+ GLA+ G+
Sbjct: 344 RLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGT 403
Query: 432 KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITR 491
+LSE EV+QLM+AAD DGNGTIDY EFI+ATMH RL+R+EHLY AFQ+FDKDNSGYIT
Sbjct: 404 RLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITT 463
Query: 492 DELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
+ELE A++++G+ D IKEIISEVD DNDGRINYEEF MMR G P P
Sbjct: 464 EELEQALREFGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKGNPDP 512
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| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1704 (604.9 bits), Expect = 2.0e-175, P = 2.0e-175
Identities = 317/466 (68%), Positives = 385/466 (82%)
Query: 74 STRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV 133
ST Q+ +LG+P+E++R+ Y G+ELGRGQFG+TYL T T ACKSI R+LV
Sbjct: 56 STTSTQQNGRILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLV 115
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYT 193
+K D ED++RE+QIM HLSG +NIV+ +GAYEDR SV+L+MELC GGELFD+II++G Y+
Sbjct: 116 HKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYS 175
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
E+AAA LCR +V VVH CH MGVMHRDLKPENFL +KD + LKATDFGLSVF G
Sbjct: 176 ERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDK 235
Query: 254 YRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313
++D+VGSAYYVAPEVL+R+YG E D+WSAGVILYILLSGVPPFW E E GIFDAIL+G +
Sbjct: 236 FKDLVGSAYYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQL 295
Query: 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRM 373
DF ++PW +SD AKDLVRKML DPK R+T+AEVL HPW+RE GEASDKP+ +AVLSRM
Sbjct: 296 DFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRM 355
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKL 433
KQFRAMNKLKKMALKVIAE LSEEEI GLK MF ++DTD +G +T EEL+TGL +LGSK+
Sbjct: 356 KQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKI 415
Query: 434 SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
SE E++QLM+AAD+DG+G+IDY+EFISATMH R+ER++HLY AFQ+FD DNSGYIT +E
Sbjct: 416 SEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEE 475
Query: 494 LETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539
LE AMK Y +GD+ SIKEII+EVDTD DG+INYEEF MM+ G P+
Sbjct: 476 LELAMKKYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMKKGNPE 521
|
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| TAIR|locus:504955360 CPK31 "calcium-dependent protein kinase 31" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1578 (560.5 bits), Expect = 4.5e-162, P = 4.5e-162
Identities = 309/469 (65%), Positives = 373/469 (79%)
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
Q T+L KP DI + Y LG ELG+GQFGIT C E ++G +YACK+ILK L +++D
Sbjct: 11 QSKRTILEKPFVDIGKVYILGDELGQGQFGITRKCVEKTSGKTYACKTILKTNLKSREDE 70
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA---QGH-YTE 194
E +KREI+IM+HLSG+ NIVEF+ AYEDR SVH+VME C GGELF KI A G Y+E
Sbjct: 71 EAVKREIRIMKHLSGEPNIVEFKKAYEDRDSVHIVMEYCGGGELFKKIEALSKDGKSYSE 130
Query: 195 KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
K A + R IVNVV +CH+MGVM RDLKPENFLLS+ D A +KA DFG SVFI+EG+V+
Sbjct: 131 KEAVEIIRPIVNVVKNCHYMGVMLRDLKPENFLLSSTDKNATVKAIDFGCSVFIEEGEVH 190
Query: 255 RDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD 314
R GSAYY+APEVL+ YGKE D+WSAG+ILYILL G PPF E E +F I +D
Sbjct: 191 RKFAGSAYYIAPEVLQGKYGKEADIWSAGIILYILLCGKPPFVTEPEAQMFSEIKSAKID 250
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMK 374
+SE W I AK LV +ML ++PK+RI++AEVL HPWM++G EASDKPI VLSR+K
Sbjct: 251 VDSESWKFIDVKAKHLVNRMLNRNPKERISAAEVLGHPWMKDG-EASDKPIDGVVLSRLK 309
Query: 375 QFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS 434
QFR MNKLKK+ALKVIA LSEEEIKGLKT+F N+DTDKSGTIT EELKTGL RLGS LS
Sbjct: 310 QFRDMNKLKKVALKVIAANLSEEEIKGLKTLFTNIDTDKSGTITLEELKTGLTRLGSNLS 369
Query: 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDEL 494
+TEV+QLM+AADVDGNGTID EFISATMHRYRL+RD+H+Y+AFQ+FDKDN G+IT++EL
Sbjct: 370 KTEVEQLMEAADVDGNGTIDIDEFISATMHRYRLDRDDHVYQAFQHFDKDNDGHITKEEL 429
Query: 495 ETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP-QPAK 542
E AMK++G+GDE SIK+II+EVDTDNDG+IN+EEF TMMRSG+ QP +
Sbjct: 430 EMAMKEHGVGDEVSIKQIITEVDTDNDGKINFEEFRTMMRSGSSLQPQR 478
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| TAIR|locus:2827528 CPK6 "calcium dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1557 (553.2 bits), Expect = 7.5e-160, P = 7.5e-160
Identities = 294/453 (64%), Positives = 362/453 (79%)
Query: 84 VLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR 143
VLG +IR YTL ++LG+GQFG TYLCT+ +TG YACKSI KRKL++K+D ED++R
Sbjct: 73 VLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRR 132
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA 203
EIQIM HL+G +NIV +GAYED VH+VMELC+GGELFD+II +GHY+E+ AA L +
Sbjct: 133 EIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKI 192
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
IV VV CH +GVMHRDLKPENFLL NKD LKA DFGLSVF G++++D+VGS YY
Sbjct: 193 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFKDVVGSPYY 252
Query: 264 VAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323
VAPEVL + YG E DVW+AGVILYILLSGVPPFWAET++GIFDA+LKG +DF+++PW +I
Sbjct: 253 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGYIDFDTDPWPVI 312
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLK 383
SDSAKDL+RKML P +R+T+ EVL HPW+ E G A D+ + AVLSR+KQF AMNKLK
Sbjct: 313 SDSAKDLIRKMLCSSPSERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLK 372
Query: 384 KMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMD 443
KMALKVIAE+LSEEEI GL+ MF MDTD SG IT++ELK GL R GS L +TE++ LM+
Sbjct: 373 KMALKVIAESLSEEEIAGLRAMFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLME 432
Query: 444 AADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI 503
AADVD +GTIDY EFI+AT+H +LER+EHL AFQYFDKD SGYIT DEL+ + ++G+
Sbjct: 433 AADVDNSGTIDYSEFIAATIHLNKLEREEHLVSAFQYFDKDGSGYITIDELQQSCIEHGM 492
Query: 504 GDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
D +++II EVD DNDGRI+YEEF MM+ G
Sbjct: 493 TD-VFLEDIIKEVDQDNDGRIDYEEFVAMMQKG 524
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8RWL2 | CDPKT_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7224 | 0.8327 | 0.8483 | no | no |
| O49717 | CDPKF_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7051 | 0.9779 | 0.9602 | no | no |
| A5A7I7 | CDPK4_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.5945 | 0.9375 | 0.9156 | N/A | no |
| P53683 | CDPK2_ORYSJ | 2, ., 7, ., 1, 1, ., 1 | 0.7158 | 0.9669 | 0.9868 | yes | no |
| P49101 | CDPK2_MAIZE | 2, ., 7, ., 1, 1, ., 1 | 0.7480 | 0.9172 | 0.9727 | N/A | no |
| Q9ZSA2 | CDPKL_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7462 | 0.9613 | 0.9849 | yes | no |
| A5A7I8 | CDPK5_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.6150 | 0.9136 | 0.9289 | N/A | no |
| Q38868 | CDPK9_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7341 | 0.8970 | 0.9020 | no | no |
| P28582 | CDPK_DAUCA | 2, ., 7, ., 1, 1, ., 1 | 0.7556 | 0.9338 | 0.9548 | N/A | no |
| Q9C6P3 | CDPKX_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7301 | 0.9080 | 0.9481 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.979 |
| 3rd Layer | 2.7.11 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh2_kg.6__3244__AT4G04720.1 | annotation not avaliable (534 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 544 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-101 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-90 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-64 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-63 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-58 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 5e-56 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 7e-55 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-54 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-50 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 8e-50 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-48 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 3e-48 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-46 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-45 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 4e-44 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-41 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 9e-41 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-40 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 4e-40 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 5e-40 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 1e-39 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-39 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-39 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-39 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-39 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-38 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 3e-38 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 7e-38 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 9e-37 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-36 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 8e-36 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-35 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 8e-35 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 2e-34 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-34 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-34 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 8e-34 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 1e-33 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-33 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-33 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 3e-33 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 4e-33 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 7e-33 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 8e-33 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 8e-33 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-32 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 2e-32 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 3e-32 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 3e-32 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 5e-32 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 2e-31 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 4e-31 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 8e-31 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 1e-30 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-30 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 3e-30 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 3e-30 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-30 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 4e-30 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 5e-30 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-29 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-29 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 1e-29 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 2e-29 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-29 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-29 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-29 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 7e-29 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 1e-28 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 1e-28 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 1e-28 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 2e-28 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 2e-28 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-28 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-28 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-28 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 5e-28 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 5e-28 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 7e-28 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 7e-28 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-27 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 1e-27 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-27 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 1e-27 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-27 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 2e-27 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-27 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 2e-27 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 3e-27 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 3e-27 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 3e-27 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 4e-27 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 4e-27 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 6e-27 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 7e-27 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 9e-27 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 1e-26 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-26 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 4e-26 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 4e-26 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 5e-26 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 1e-25 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-25 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 2e-25 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 4e-25 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 6e-25 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 7e-25 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 9e-25 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 1e-24 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-24 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-24 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-24 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 3e-24 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 6e-24 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 8e-24 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 9e-24 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 1e-23 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 1e-23 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-23 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 2e-23 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 2e-23 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 2e-23 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 2e-23 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-23 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 3e-23 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 4e-23 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 5e-23 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 7e-23 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 9e-23 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-22 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-22 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-22 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 5e-22 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 5e-22 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 7e-22 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 9e-22 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 9e-22 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 1e-21 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-21 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-21 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 2e-21 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-21 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 3e-21 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-21 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 4e-21 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 5e-21 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 8e-21 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 8e-21 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 1e-20 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 1e-20 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-20 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-20 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-20 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 2e-20 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 3e-20 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 5e-20 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 6e-20 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 7e-20 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 2e-19 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-19 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 3e-19 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-19 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 4e-19 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 4e-19 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 7e-19 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-18 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 1e-18 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-18 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 1e-18 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 2e-18 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 3e-18 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-18 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 3e-18 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 8e-18 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 9e-18 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 9e-18 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 2e-17 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-17 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-17 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-17 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 3e-17 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 3e-17 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 4e-17 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 6e-17 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-16 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-16 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 3e-16 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-16 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 4e-16 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 9e-16 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 1e-15 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 2e-15 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-15 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-15 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 2e-15 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 2e-15 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-15 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 3e-15 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 7e-15 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-14 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 2e-14 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 2e-14 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-14 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 3e-14 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 3e-14 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-14 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 7e-14 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 1e-13 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-13 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 5e-13 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 5e-13 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 5e-13 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 6e-13 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 9e-13 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 9e-13 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 1e-12 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-12 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-12 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-12 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 3e-12 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 4e-12 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 5e-12 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 5e-12 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-12 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 7e-12 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 8e-12 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 1e-11 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-11 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 3e-11 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 4e-11 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 6e-11 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 6e-11 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 8e-11 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-10 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-10 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 9e-10 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-09 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 1e-09 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 2e-09 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 2e-09 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-09 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 4e-09 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 4e-09 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 6e-09 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 7e-09 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 2e-08 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 2e-08 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 3e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-08 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 4e-08 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 4e-08 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-08 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-08 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 5e-08 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 5e-08 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 8e-08 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 8e-08 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 9e-08 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 1e-07 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-07 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-07 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-07 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 2e-07 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-07 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 3e-07 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 4e-07 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 4e-07 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 6e-07 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 8e-07 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 8e-07 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 9e-07 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-06 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 1e-06 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 1e-06 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-06 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 1e-06 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 2e-06 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 2e-06 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-06 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-06 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 4e-06 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-06 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 4e-06 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 4e-06 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 8e-06 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 8e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 1e-05 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 2e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 2e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 2e-05 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 2e-05 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 2e-05 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 3e-05 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 4e-05 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 5e-05 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 6e-05 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 6e-05 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 6e-05 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 8e-05 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 8e-05 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 9e-05 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-04 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-04 | |
| cd00213 | 88 | cd00213, S-100, S-100: S-100 domain, which represe | 1e-04 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 3e-04 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 3e-04 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-04 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 5e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 7e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 7e-04 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 8e-04 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 9e-04 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 0.001 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.002 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 0.002 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 0.002 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 0.002 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 0.002 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 0.002 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 304 bits (781), Expect = e-101
Identities = 114/261 (43%), Positives = 160/261 (61%), Gaps = 9/261 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + ++LG G FG YL + TG A K I K+K+ K+DRE I REI+I++ L
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKI--KKDRERILREIKILKKL-KHP 57
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV +ED ++LVME C GG+LFD + +G +E A R I++ + + H G
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL-RRSYG 274
++HRDLKPEN LL ++DG +K DFGL+ +D G+ VG+ Y+APEVL + YG
Sbjct: 118 IVHRDLKPENILL-DEDG--HVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYG 174
Query: 275 KEIDVWSAGVILYILLSGVPPFWA-ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
K +D+WS GVILY LL+G PPF + +F I K F W IS AKDL+RK
Sbjct: 175 KAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW-DISPEAKDLIRK 233
Query: 334 MLIQDPKKRITSAEVLEHPWM 354
+L++DP+KR+T+ E L+HP+
Sbjct: 234 LLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 3e-90
Identities = 106/265 (40%), Positives = 150/265 (56%), Gaps = 11/265 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L ++LG G FG Y TG A K + KR +K+D+ REI+I++ LS
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTAR-REIRILRRLSHP- 58
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV A+ED+ ++LVME C GG+LFD + G +E A + I+ + + H G
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSAYYVAPEVLRRS-- 272
++HRDLKPEN LL ++K DFGL+ + + VG+ +Y+APEVL
Sbjct: 119 IIHRDLKPENILLDENG---VVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNG 175
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFESEPWLLISDSAKD 329
YG ++DVWS GVILY LL+G PPF E + IL ++F+ W S+ AKD
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
L++K L +DP KR T+ E+L+HPW
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 210 bits (538), Expect = 1e-64
Identities = 96/258 (37%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L + TG YA K + K+K++ +++ E E I+ ++ IV+
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
A++ + ++LV+E GGELF + +G ++E+ A IV + + H +G+++RDL
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119
Query: 222 KPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDV 279
KPEN LL + DG L TDFGL+ EG G+ Y+APEVL YGK +D
Sbjct: 120 KPENILL-DADGHIKL--TDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDW 176
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS GV+LY +L+G PPF+AE K I++ ILK + F +S A+DL+ +L +DP
Sbjct: 177 WSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEF----LSPEARDLISGLLQKDP 232
Query: 340 KKRITSA---EVLEHPWM 354
KR+ S E+ HP+
Sbjct: 233 TKRLGSGGAEEIKAHPFF 250
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 3e-63
Identities = 91/255 (35%), Positives = 128/255 (50%), Gaps = 44/255 (17%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG G FG YL + TG A K I K + E++ REI+I++ L+ NIV+
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED--SSSLLEELLREIEILKKLNHP-NIVKLY 57
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220
G +ED ++LVME C GG L D + G +E + I+ + + H G++HRD
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VYRDIVGSAYYVAPEVLR--RSYGKEI 277
LKPEN LL + +G +K DFGLS + K + + IVG+ Y+APEVL Y ++
Sbjct: 118 LKPENILLDSDNG--KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D+WS GVILY L KDL+RKML +
Sbjct: 176 DIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200
Query: 338 DPKKRITSAEVLEHP 352
DP+KR ++ E+LEH
Sbjct: 201 DPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 1e-58
Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 19/265 (7%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+ +G +G +L + STG+ YA K I K ++ K + + E I+ +V+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSP-YVVKLY 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+++ +++++LVME GG+L + G E A IV + + H G++HRDL
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVF---------IDEGKVYRDIVGSAYYVAPEV-LRR 271
KP+N L+ + +G LK TDFGLS D+ K + IVG+ Y+APEV L +
Sbjct: 120 KPDNILI-DSNG--HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+ K +D WS G ILY L G+PPF ET + IF IL G +++ + +SD A DL+
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDV--EVSDEAIDLI 234
Query: 332 RKMLIQDPKKRITSA---EVLEHPW 353
K+L+ DP+KR+ + E+ HP+
Sbjct: 235 SKLLVPDPEKRLGAKSIEEIKNHPF 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 5e-56
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 16/267 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+T G+ LGRG FG YL + TG A KS+ + ++++ E ++REI+I+ L
Sbjct: 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSV-ELSGDSEEELEALEREIRILSSLQ-HP 59
Query: 156 NIVEFRGAYEDRQSVHL--VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV + G+ D + L +E SGG L + G E R I+ + + H
Sbjct: 60 NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR 270
G++HRD+K N L+ D ++K DFG + + + + + G+ Y++APEV+R
Sbjct: 120 NGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR 176
Query: 271 RS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSA 327
YG+ D+WS G + + +G PP W+E A+ K G P + +S+ A
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATGKPP-WSELGNP-MAALYKIGSS-GEPPEIPEHLSEEA 233
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
KD +RK L +DPKKR T+ E+L+HP++
Sbjct: 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 7e-55
Identities = 87/285 (30%), Positives = 132/285 (46%), Gaps = 35/285 (12%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-IKREIQIMQHLSGQ 154
+ GK +G G F L E T YA K IL ++ + K+ + +K E +++ L+G
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIK-ILDKRQLIKEKKVKYVKIEKEVLTRLNGH 61
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
I++ ++D ++++ V+E GEL I G EK I+ + + H
Sbjct: 62 PGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK 121
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----------------- 257
G++HRDLKPEN LL +KD + TDFG + +D
Sbjct: 122 GIIHRDLKPENILL-DKDMHIKI--TDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRR 178
Query: 258 ----VGSAYYVAPEVLRRSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG 312
VG+A YV+PE+L GK D+W+ G I+Y +L+G PPF E F ILK
Sbjct: 179 FASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITS----AEVLEHPW 353
F AKDL+ K+L+ DP+ R+ E+ HP+
Sbjct: 239 YSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 1e-54
Identities = 77/264 (29%), Positives = 140/264 (53%), Gaps = 16/264 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSI-LKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y + K++G+G FG YL S G Y K I L +++++RED E++I++ L+
Sbjct: 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN--MSEKEREDALNEVKILKKLN-H 58
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----IAQGHYTEKAAAALCRAIVNVVHH 210
NI+++ ++E++ + +VME GG+L KI + E+ + + +
Sbjct: 59 PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKY 118
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL 269
H ++HRD+KP+N L++ ++K DFG+S V + + +VG+ YY++PE+
Sbjct: 119 LHSRKILHRDIKPQNIFLTSNG---LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELC 175
Query: 270 R-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
+ + Y + D+WS G +LY L + PF E + ILKG + S +
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQY---SSELR 232
Query: 329 DLVRKMLIQDPKKRITSAEVLEHP 352
+LV +L +DP++R + A++L+ P
Sbjct: 233 NLVSSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 176 bits (446), Expect = 5e-50
Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 28/284 (9%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + ++LG G FG YL + A K + K+ ++ E REIQI+ L+
Sbjct: 2 YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFD---KIIAQGHYTEKAAAALCRAIVNVVHHCH 212
NIV+ ++D S++LVME GG L D KI +G +E A + I++ + + H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-------YRDIVGSAYYVA 265
G++HRD+KPEN LL ++K DFGL+ + + VG+ Y+A
Sbjct: 119 SKGIIHRDIKPENILLDRDGR--VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 266 PEVLR----RSYGKEIDVWSAGVILYILLSGVPPF----WAETEKGIFDAILKGGVDFES 317
PEVL D+WS G+ LY LL+G+PPF + IL+ +
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236
Query: 318 EPW-----LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
P LIS +A DL++K+L +DPK R++S+ L H +
Sbjct: 237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280
|
Length = 384 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 8e-50
Identities = 92/270 (34%), Positives = 143/270 (52%), Gaps = 22/270 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ K LG G FG L +G YA K + K K+V + E + E +I+Q +
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HP 61
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA---AALCRAIVNVVHHCH 212
+V G+++D +++LVME GGELF + G + E A AA +V + + H
Sbjct: 62 FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAA---QVVLALEYLH 118
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRR 271
+ +++RDLKPEN LL + DG +K TDFG + + Y + G+ Y+APE+ L +
Sbjct: 119 SLDIVYRDLKPENLLL-DSDG--YIKITDFGFAKRVKGR-TY-TLCGTPEYLAPEIILSK 173
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
YGK +D W+ G+++Y +L+G PPF+ + I++ IL+G V F S S AKDL+
Sbjct: 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSF----FSPDAKDLI 229
Query: 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356
R +L D KR+ ++ HPW
Sbjct: 230 RNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 1e-48
Identities = 89/265 (33%), Positives = 143/265 (53%), Gaps = 20/265 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + +++G+G FG Y TG A K I KL +K+ +E I EIQI++
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVI---KLESKEKKEKIINEIQILKKCK-HP 57
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFM 214
NIV++ G+Y + + +VME CSGG L D + + TE A +C+ ++ + + H
Sbjct: 58 NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN 117
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR-SY 273
G++HRD+K N LL++ DG +K DFGLS + + K +VG+ Y++APEV+ Y
Sbjct: 118 GIIHRDIKAANILLTS-DGE--VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPY 174
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-GGVDF----ESEPWLLISDSAK 328
+ D+WS G+ L G PP+ +E A+ K E W SD K
Sbjct: 175 DYKADIWSLGITAIELAEGKPPY---SELPPMKALFKIATNGPPGLRNPEKW---SDEFK 228
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPW 353
D ++K L ++P+KR T+ ++L+HP+
Sbjct: 229 DFLKKCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 3e-48
Identities = 83/260 (31%), Positives = 139/260 (53%), Gaps = 14/260 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG G FG L S ++A K + KR +V +E I E +I++ + IV+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLY 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++D++ ++++ME C GGEL+ + +G + E A +V + H G+++RDL
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVW 280
KPEN LL + +K DFG + + G+ G+ YVAPE+ L + Y +D W
Sbjct: 120 KPENLLLDSN---GYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176
Query: 281 SAGVILYILLSGVPPFWAETEK--GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
S G++LY LL+G PPF + E I++ ILKG E I +AKDL++++L ++
Sbjct: 177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN--YIDKAAKDLIKQLLRRN 234
Query: 339 PKKRITS-----AEVLEHPW 353
P++R+ + ++ +H W
Sbjct: 235 PEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 4e-46
Identities = 92/279 (32%), Positives = 151/279 (54%), Gaps = 18/279 (6%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
D R+ Y +++G G G Y T+ +TG A +K+ + KQ++E I EI IM+
Sbjct: 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVA----IKKMRLRKQNKELIINEILIMK 70
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY--TEKAAAALCRAIVNV 207
NIV++ +Y + +VME GG L D II Q E A +CR ++
Sbjct: 71 DCK-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTD-IITQNFVRMNEPQIAYVCREVLQG 128
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAP 266
+ + H V+HRD+K +N LL +KDG +K DFG + + + K R+ +VG+ Y++AP
Sbjct: 129 LEYLHSQNVIHRDIKSDNILL-SKDGS--VKLADFGFAAQLTKEKSKRNSVVGTPYWMAP 185
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFDAILKGGVDF-ESEPWLLI 323
EV++R YG ++D+WS G++ + G PP+ E + +F KG E W
Sbjct: 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKW--- 242
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362
S KD + K L++DP+KR ++ E+L+HP++++ +
Sbjct: 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEE 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 3e-45
Identities = 84/260 (32%), Positives = 128/260 (49%), Gaps = 10/260 (3%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K + +G FG YL + STG+ +A K + K ++ K ++K E IM + +
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++ + ++LVME +GG+ I G E A +V V H G++HR
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYG-KEID 278
D+KPEN L+ LK TDFGLS G + VG+ Y+APE + K D
Sbjct: 122 DIKPENLLIDQT---GHLKLTDFGLS---RNGLENKKFVGTPDYLAPETILGVGDDKMSD 175
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
WS G +++ L G PPF AET +FD IL +++ E S A DL+ ++L D
Sbjct: 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235
Query: 339 PKKRITS---AEVLEHPWMR 355
P KR+ + E+ HP+ +
Sbjct: 236 PAKRLGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 4e-44
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 37/292 (12%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + K +GRG FG +L + TG YA K + K ++ + ++ E I+
Sbjct: 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW 62
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
IV+ +++D + ++LVME GG+L + +I + + E+ A +V + H +G
Sbjct: 63 -IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG 121
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK----------------------- 252
+HRD+KP+N L+ DG +K DFGL +++ K
Sbjct: 122 FIHRDIKPDNILID-ADG--HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRR 178
Query: 253 ------VYRD-IVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGI 304
V + VG+ Y+APEVLR YG E D WS GVILY +L G PPF+++T +
Sbjct: 179 DHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAE-VLEHPWMR 355
++ I+ P +S A DL+ + L+ DP+ R+ S E + HP+ +
Sbjct: 239 YNKIINWKESLRFPPDPPVSPEAIDLICR-LLCDPEDRLGSFEEIKSHPFFK 289
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-41
Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 37/289 (12%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G G GI + + TG + A K + R+L + + REI+ +Q
Sbjct: 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQAL-REIKALQACQ-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFM 214
+V+ + LVME +L + + + E + R ++ V + H
Sbjct: 60 YVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN 118
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSV--FIDEGKVYRDIVGSAYYVAPEVL--R 270
G+MHRDLKP N L+S +LK DFGL+ +E ++Y V + +Y APE+L
Sbjct: 119 GIMHRDLKPANLLISADG---VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA 175
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-------------------G 311
R Y +D+W+ G I LL+G P F E + + +
Sbjct: 176 RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235
Query: 312 GVDF-ESEPWLL------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
+ F ES+P L S A DL++ +L+ DP KR+++AE L HP+
Sbjct: 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 9e-41
Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG 153
Y GK+LG G + + Y + TG A K I + +D + REI+++Q L
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK- 60
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSG---GELFDKII--AQGHYTEKA-AAALCRAIVNV 207
NI+ + + +++LV E + DK I K+ R +
Sbjct: 61 HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADI--KSYMLMTLRGL--- 115
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAP 266
+ H ++HRDLKP N LL DG +LK DFGL+ F + V + +Y AP
Sbjct: 116 -EYLHSNWILHRDLKPNN-LLIASDG--VLKLADFGLARSFGSPNRKMTHQVVTRWYRAP 171
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAI------------ 308
E+L R YG +D+WS G I LL VP +++ IF+A+
Sbjct: 172 ELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231
Query: 309 -LKGGVDFESEP----WLLI---SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
L V+F+ P + SD A DL++++L +P KRIT+ + LEHP+
Sbjct: 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN 287
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 1e-40
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 57/298 (19%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED--IK----REIQIMQ 149
Y ++LG G +G+ Y + TG A K I + D E+ I REI +++
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI-------RLDNEEEGIPSTALREISLLK 53
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD--KII--AQGHYTEKAAAALCRAIV 205
L NIV+ + ++LV E C D K + G + ++ ++
Sbjct: 54 ELK-HPNIVKLLDVIHTERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLL 108
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYV 264
+ +CH ++HRDLKP+N L+ N+DG +LK DFGL+ F + Y V + +Y
Sbjct: 109 RGLAYCHSHRILHRDLKPQNILI-NRDG--VLKLADFGLARAFGIPLRTYTHEVVTLWYR 165
Query: 265 APEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKG------- 311
APE+L + Y +D+WS G I +++G P F ++E IF IL G
Sbjct: 166 APEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQ-IL-GTPTEESW 223
Query: 312 -GVD-----------FESEPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
GV F + + DL+ KML +P KRI++ E L+HP+
Sbjct: 224 PGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 4e-40
Identities = 98/267 (36%), Positives = 146/267 (54%), Gaps = 19/267 (7%)
Query: 100 KELGRGQFGITYLC---TENSTGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQ 155
K LG+G +G + T TG +A K + K +V N++D K E I++ +
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
IV+ A++ ++L++E SGGELF + +G + E A I + H H G
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+++RDLKPEN LL D +K TDFGL I EG V G+ Y+APE+L RS +
Sbjct: 121 IIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGH 177
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
GK +D WS G ++Y +L+G PPF AE K D ILKG ++ P+L + A+DL++K
Sbjct: 178 GKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNL--PPYL--TPEARDLLKK 233
Query: 334 MLIQDPKKRITS-----AEVLEHPWMR 355
+L ++P R+ + AEV HP+ R
Sbjct: 234 LLKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 5e-40
Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 8/255 (3%)
Query: 103 GRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG 162
G+G FG + + T +A K + K+K V K ++ E +I+Q L+ +V
Sbjct: 9 GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWY 67
Query: 163 AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLK 222
+++D ++++LV++L GG+L + + ++E+ IV + + H G++HRD+K
Sbjct: 68 SFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIK 127
Query: 223 PENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWS 281
P+N LL + + TDF ++ + + G+ Y+APEVL R+ Y +D WS
Sbjct: 128 PDNILLDEQ---GHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWS 184
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GV Y L G P+ + D I + S A D + K+L +DP+K
Sbjct: 185 LGVTAYECLRGKRPYRGHSRTIR-DQIRAKQETADVLYPATWSTEAIDAINKLLERDPQK 243
Query: 342 RI--TSAEVLEHPWM 354
R+ ++ HP+
Sbjct: 244 RLGDNLKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 1e-39
Identities = 92/295 (31%), Positives = 151/295 (51%), Gaps = 25/295 (8%)
Query: 68 MKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI 127
MK++ T KP+T K L D +G+ LG G FG + TG YA K +
Sbjct: 1 MKAAYMFT----KPDTSSWK-LSDFE----MGETLGTGSFGRVRIAKHKGTGEYYAIKCL 51
Query: 128 LKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII 187
KR+++ + + + +E I+ LS IV +++D V+ ++E GGELF +
Sbjct: 52 KKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLR 110
Query: 188 AQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247
G + A +V + H +++RDLKPEN LL D +K TDFG +
Sbjct: 111 KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKK 167
Query: 248 IDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD 306
+ + + + + G+ Y+APEV++ + +GK +D W+ GV+LY ++G PPF+ +T I++
Sbjct: 168 VPD-RTF-TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE 225
Query: 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS-----AEVLEHPWMRE 356
IL G + F + W A+DLV+ +L D KR+ + A+V HP+
Sbjct: 226 KILAGRLKFPN--W--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276
|
Length = 329 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-39
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 14/263 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLSGQQNIV 158
K LG+G G+ Y TG YA K I + ++ R+ + RE++ + +V
Sbjct: 7 KVLGQGSSGVVYKVRHKPTGKIYALKKI---HVDGDEEFRKQLLRELKTL-RSCESPYVV 62
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMGVM 217
+ GA+ + +V+E GG L D + G E A + R I+ + + H ++
Sbjct: 63 KCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHII 122
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR-RSYGK 275
HRD+KP N L+ N G K DFG+S ++ + VG+ Y++PE ++ SY
Sbjct: 123 HRDIKPSNLLI-NSKGEV--KIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSY 179
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW--LLISDSAKDLVRK 333
D+WS G+ L G PF + F+ +++ D S +D +
Sbjct: 180 AADIWSLGLTLLECALGKFPFLPPGQPSFFE-LMQAICDGPPPSLPAEEFSPEFRDFISA 238
Query: 334 MLIQDPKKRITSAEVLEHPWMRE 356
L +DPKKR ++AE+L+HP++++
Sbjct: 239 CLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 143 bits (364), Expect = 2e-39
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 20/266 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG +GRG FG+ Y TG+ A K I K+ ++ + I +EI ++++L
Sbjct: 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLK-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV++ G+ E S+++++E G L I G + E A ++ + + H G
Sbjct: 60 NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLRRSYG 274
V+HRD+K N L KDG ++K DFG++ D K +VG+ Y++APEV+
Sbjct: 120 VIHRDIKAANILT-TKDG--VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIE---M 173
Query: 275 KEI----DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSAK 328
D+WS G + LL+G PP++ I++ + P L IS K
Sbjct: 174 SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-----DDHPPLPEGISPELK 228
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWM 354
D + + +DP R T+ ++L+HPW+
Sbjct: 229 DFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 2e-39
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 23/276 (8%)
Query: 96 YTLGKELGRGQFGITYLC---TENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHL 151
+ L + LG G +G +L + G YA K + K +V K E + E Q+++ +
Sbjct: 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
+V A++ +HL+++ +GGELF + + H+TE IV + H
Sbjct: 62 RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHL 121
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVL 269
H +G+++RD+K EN LL + +G +L TDFGLS + R G+ Y+APEV+
Sbjct: 122 HQLGIIYRDIKLENILL-DSEGHVVL--TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVI 178
Query: 270 RR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLL 322
R + K +D WS GV+ + LL+G PF + E+ I ILK F
Sbjct: 179 RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKT---- 234
Query: 323 ISDSAKDLVRKMLIQDPKKRI---TSAEVLEHPWMR 355
+S A+D ++K+L +DPKKR+ + E+ HP+ +
Sbjct: 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQ 270
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 4e-39
Identities = 76/266 (28%), Positives = 140/266 (52%), Gaps = 24/266 (9%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G FG +L + + + YA K + +++ + + + E ++++ +S I+
Sbjct: 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIR 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
D++ ++++ME GGELF + G ++ IV + + H +++R
Sbjct: 66 LFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----IVGSAYYVAPEVL-RRSYG 274
DLKPEN LL +K+G +K TDFG + K RD + G+ Y+APEV+ + +
Sbjct: 126 DLKPENILL-DKEG--HIKLTDFGFA------KKLRDRTWTLCGTPEYLAPEVIQSKGHN 176
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K +D W+ G+++Y +L G PPF+ + GI++ IL G ++F + AKDL++K+
Sbjct: 177 KAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRH----LDLYAKDLIKKL 232
Query: 335 LIQDPKKRI-----TSAEVLEHPWMR 355
L+ D +R+ + +V H W +
Sbjct: 233 LVVDRTRRLGNMKNGADDVKNHRWFK 258
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 2e-38
Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 21/281 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREI 145
G P + F ++G G GI + T+ STG A K K L +Q RE + E+
Sbjct: 15 GDPRSYLDNF----VKIGEGSTGIVCIATDKSTGRQVAVK---KMDLRKQQRRELLFNEV 67
Query: 146 QIM---QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR 202
IM QH NIVE +Y + +VME GG L D I+ E+ A +C
Sbjct: 68 VIMRDYQH----PNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCL 122
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSA 261
A++ + H GV+HRD+K ++ LL+ DG +K +DFG + E + +VG+
Sbjct: 123 AVLKALSFLHAQGVIHRDIKSDSILLT-SDG--RVKLSDFGFCAQVSKEVPRRKSLVGTP 179
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
Y++APEV+ R YG E+D+WS G+++ ++ G PP++ E I
Sbjct: 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL- 238
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361
+S + + +ML++DP +R T+AE+L HP++ + G S
Sbjct: 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 3e-38
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 38/289 (13%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y ++G G +G+ Y + TG A K I K + ++ + REI++++ L+
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKI-KLRFESEGIPKTALREIKLLKELN-HP 58
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKII--AQGHYTEKAAAALCRAIVNVVHHCHF 213
NI++ + + ++LV E K+I Q E + ++ + CH
Sbjct: 59 NIIKLLDVFRHKGDLYLVFEFMD--TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS 116
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS 272
G++HRDLKPEN L+ N +G +LK DFGL+ F + Y V + +Y APE+L
Sbjct: 117 HGILHRDLKPENLLI-NTEG--VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD 173
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETE-------------------KGIFDAILKG 311
Y +D+WS G I LLS P F ++E
Sbjct: 174 KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233
Query: 312 GVDFESE---PWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
F + P + S A DL+ +ML DP KRIT+ + L HP+
Sbjct: 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 7e-38
Identities = 91/296 (30%), Positives = 141/296 (47%), Gaps = 49/296 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHLSGQQN 156
K LG+G G +L TG +A K + K++++ R +KR E +I+ L
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---RNKVKRVLTEQEILATLD-HPF 62
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFM 214
+ +++ + LVM+ C GGELF + Q +E+ A ++ + + H +
Sbjct: 63 LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL 122
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI---------------- 257
G+++RDLKPEN LL ++ G ML +DF LS D E
Sbjct: 123 GIVYRDLKPENILL-HESGHIML--SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSE 179
Query: 258 -------------VGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG 303
VG+ Y+APEV+ +G +D W+ G++LY +L G PF
Sbjct: 180 TFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239
Query: 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS----AEVLEHPWMR 355
F ILK V F P +S SA+DL+RK+L++DP KR+ S AE+ +HP+ R
Sbjct: 240 TFSNILKKEVTFPGSP--PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 9e-37
Identities = 91/277 (32%), Positives = 148/277 (53%), Gaps = 24/277 (8%)
Query: 96 YTLGKELGRGQFGITYL---CTENSTGNSYACKSILKRKLVNK-QDREDIKREIQIMQHL 151
+ L K LG G +G +L T + TG YA K + K LV K + E + E +++H+
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
+V A++ +HL+++ SGGE+F + + +++E I+ + H
Sbjct: 62 RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHL 121
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYR-DIVGSAYYVAPEVL 269
H +G+++RD+K EN LL + +G +L TDFGLS F+ E K G+ Y+APE++
Sbjct: 122 HKLGIVYRDIKLENILL-DSEGHVVL--TDFGLSKEFLSEEKERTYSFCGTIEYMAPEII 178
Query: 270 R--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLLI 323
R +GK +D WS G++++ LL+G PF E E+ + ILK F S I
Sbjct: 179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPS----FI 234
Query: 324 SDSAKDLVRKMLIQDPKKRITSA-----EVLEHPWMR 355
A+DL+ K+L +DPKKR+ + E+ EHP+ +
Sbjct: 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 2e-36
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 48/295 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-REIQIMQHLSGQ 154
Y + K+LG G FG YL TG A K +K+K + + E + RE++ ++ L+
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKK-MKKKFYSWE--ECMNLREVKSLRKLNEH 57
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
NIV+ + + + ++ V E G L+ + + ++E ++ I+ + H H
Sbjct: 58 PNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH 116
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS 272
G HRDLKPEN L+S + ++K DFGL+ I Y D V + +Y APE+L RS
Sbjct: 117 KHGFFHRDLKPENLLVSGPE---VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRS 173
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-----GGVDFESEPWL---- 321
Y +D+W+ G I+ L + P F +E D + K G + W
Sbjct: 174 TSYSSPVDIWALGCIMAELYTLRPLFPGSSE---IDQLYKICSVLG--TPTKQDWPEGYK 228
Query: 322 -------------------LI---SDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
LI S A DL++ ML DPKKR T+++ L+HP+
Sbjct: 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 135 bits (340), Expect = 8e-36
Identities = 89/279 (31%), Positives = 150/279 (53%), Gaps = 25/279 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENS---TGNSYACKSILKRKLVNK-QDREDIKREIQIMQHL 151
+ L K LG G +G +L + S +G YA K + K +V K + E + E Q+++H+
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
+V A++ +HL+++ +GGELF + + + E+ IV + H
Sbjct: 62 RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHL 121
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVL 269
H +G+++RD+K EN LL + +G +L TDFGLS E +V R G+ Y+AP+++
Sbjct: 122 HKLGIIYRDIKLENILL-DSNGHVVL--TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIV 178
Query: 270 R---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLL 322
R + K +D WS GV++Y LL+G PF + EK I ILK + E
Sbjct: 179 RGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE---- 234
Query: 323 ISDSAKDLVRKMLIQDPKKRITSA-----EVLEHPWMRE 356
+S AKD+++++L++DPKKR+ E+ +HP+ ++
Sbjct: 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-35
Identities = 86/269 (31%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
F L + +G+G +G +L + TG A K + K L + + E I+ +
Sbjct: 2 DFQILTQ-VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TK 59
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ +V+ A++D + ++L ME GG+ + G +E A + V H
Sbjct: 60 SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHE 119
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RS 272
+G +HRDLKPENFL+ G +K TDFGLS I +VGS Y+APEVLR +
Sbjct: 120 LGYIHRDLKPENFLID-ASG--HIKLTDFGLSKGIVT-YAN-SVVGSPDYMAPEVLRGKG 174
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE----SEPWLLISDSAK 328
Y +D WS G +LY L G PPF T ++ + + +P +SD A
Sbjct: 175 YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234
Query: 329 DLVRKMLIQDPKKRITSAE-VLEHPWMRE 356
DL+ K+ I DP +R S E + HP+ +E
Sbjct: 235 DLITKL-INDPSRRFGSLEDIKNHPFFKE 262
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 8e-35
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 54/295 (18%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI----KREIQIMQHLSGQQ 155
++G G +G Y TG A K K+ + ++E REI+++Q L
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALK-----KIRMENEKEGFPITAIREIKLLQKLR-HP 58
Query: 156 NIVEFRGAYEDRQ--SVHLVMELCSGGELFD--KIIAQG--HYTEKAAAALCRAIVNVVH 209
NIV + + S+++V E D ++ +TE + ++ +
Sbjct: 59 NIVRLKEIVTSKGKGSIYMVFEYMD----HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQ 114
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDIVGSAYYVAPE 267
+ H G++HRD+K N L++N +LK DFGL+ Y + V + +Y PE
Sbjct: 115 YLHSNGILHRDIKGSNILINND---GVLKLADFGLARPYTKRNSADYTNRVITLWYRPPE 171
Query: 268 VL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GGVDFESEPWL-- 321
+L YG E+D+WS G IL L G P F TE + I + G E+ P +
Sbjct: 172 LLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231
Query: 322 -----------------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
LI SA DL+ K+L DPKKRI++ + L+H +
Sbjct: 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-34
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 15/264 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN--IVE 159
+G+G FG Y + T YA K + K+++V K++ E I+ ++ IV
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ +++ ++LV + SGGELF + +G ++E A +V + H H +++R
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKE 276
DLKPEN LL D + DFGLS + + K G+ Y+APEVL + Y K
Sbjct: 121 DLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKH 177
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
+D WS GV+++ + G PF+AE + ++ I G V F P ++SD + V+ +L
Sbjct: 178 VDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNVLSDEGRQFVKGLLN 234
Query: 337 QDPKKRITS----AEVLEHPWMRE 356
++P+ R+ + E+ EHP+ +
Sbjct: 235 RNPQHRLGAHRDAVELKEHPFFAD 258
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-34
Identities = 76/268 (28%), Positives = 139/268 (51%), Gaps = 21/268 (7%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ + + ++LG G +G Y TG A K + ++D ++I +EI I++
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP-----VEEDLQEIIKEISILKQ-CD 56
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCH 212
IV++ G+Y + +VME C G + D + I TE+ AA+ + + + H
Sbjct: 57 SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH 116
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLRR 271
+HRD+K N LL N++G A K DFG+S + + R+ ++G+ +++APEV++
Sbjct: 117 SNKKIHRDIKAGNILL-NEEGQA--KLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQE 173
Query: 272 S-YGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAILKGGVDFESEP--WLLISDS 326
Y + D+WS G+ + G PP+ ++ + IF K S+P W S
Sbjct: 174 IGYNNKADIWSLGITAIEMAEGKPPY-SDIHPMRAIFMIPNKPPPTL-SDPEKW---SPE 228
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWM 354
D V+K L++DP++R ++ ++L+HP++
Sbjct: 229 FNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 2e-34
Identities = 82/263 (31%), Positives = 139/263 (52%), Gaps = 15/263 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTA 59
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ +++ + VME +GGELF + + ++E A IV+ + + H V++R
Sbjct: 60 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYR 119
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEI 277
DLK EN +L +KDG +K TDFGL I +G + G+ Y+APEVL + YG+ +
Sbjct: 120 DLKLENLML-DKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 232
Query: 338 DPKKRI-----TSAEVLEHPWMR 355
DPK+R+ + E++EH +
Sbjct: 233 DPKQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 8e-34
Identities = 91/324 (28%), Positives = 134/324 (41%), Gaps = 76/324 (23%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-QDREDIK---REIQIMQHL 151
Y L K +G G +G+ + TG A K K+ N D D K REI++++HL
Sbjct: 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIK-----KISNVFDDLIDAKRILREIKLLRHL 56
Query: 152 SGQQNIVEFR-----GAYEDRQSVHLVMELCSGGELFD----KIIAQGHY-TEKAAAA-- 199
+NI+ + ED V++V EL + K+I T+
Sbjct: 57 -RHENIIGLLDILRPPSPEDFNDVYIVTEL------METDLHKVIKSPQPLTDDHIQYFL 109
Query: 200 --LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
+ R + + H V+HRDLKP N +L N + LK DFGL+ +D + +
Sbjct: 110 YQILRGL----KYLHSANVIHRDLKPSN-ILVNSN--CDLKICDFGLARGVDPDEDEKGF 162
Query: 258 ----VGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDA 307
V + +Y APE+L Y K ID+WS G I LL+ P F I +
Sbjct: 163 LTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEV 222
Query: 308 I------------------------LKGGVDFESEPWLL--ISDSAKDLVRKMLIQDPKK 341
+ K L S A DL+ KML+ DPKK
Sbjct: 223 LGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSK---LFPGASPEAIDLLEKMLVFDPKK 279
Query: 342 RITSAEVLEHPWMREGGEASDKPI 365
RIT+ E L HP++ + + D+P+
Sbjct: 280 RITADEALAHPYLAQLHDPEDEPV 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 1e-33
Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 19/265 (7%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHLSGQ 154
GK LG+G FG YLC + TG A K + + + ++++ EIQ++++L
Sbjct: 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD-SPETKKEVNALECEIQLLKNLQ-H 63
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+ IV++ G D +++ + ME GG + D++ A G TE R I+ V + H
Sbjct: 64 ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN 123
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID----EGKVYRDIVGSAYYVAPEVLR 270
++HRD+K N L +D +K DFG S + G + + G+ Y+++PEV+
Sbjct: 124 MIVHRDIKGANIL---RDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS 180
Query: 271 -RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDSA 327
YG++ DVWS G + +L+ PP WAE E AI K + P L +S A
Sbjct: 181 GEGYGRKADVWSVGCTVVEMLTEKPP-WAEFEA--MAAIFKIATQ-PTNPQLPSHVSPDA 236
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHP 352
++ +R+ +++ KKR ++ E+L H
Sbjct: 237 RNFLRRTFVENAKKRPSAEELLRHF 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 1e-33
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK---REIQIMQHLSGQQ 155
G+ LG G FG Y G+ +A K + + +E +K +EI ++ L
Sbjct: 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSL-ADDGQTGQEAVKQLEQEIALLSKLQ-HP 62
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV++ G + ++++ +EL GG L + G + E R I+ + + H
Sbjct: 63 NIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN 122
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SY 273
+HRD+K N L+ ++K DFG++ + E + GS Y++APEV+ + Y
Sbjct: 123 TVHRDIKGANILVDTN---GVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGY 179
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI----SDSAKD 329
G D+WS G + + +G PP W++ E A+ K G E P I SD AKD
Sbjct: 180 GLAADIWSLGCTVLEMATGKPP-WSQLEG--VAAVFKIGRSKELPP---IPDHLSDEAKD 233
Query: 330 LVRKMLIQDPKKRITSAEVLEHP 352
+ K L +DP R T+AE+LEHP
Sbjct: 234 FILKCLQRDPSLRPTAAELLEHP 256
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSI----LKRKLVNKQDREDIKREIQIMQHLSG 153
G ++G G FG Y TG A K I K + ++I E+++++ L
Sbjct: 4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTI-----KEIADEMKVLELLK- 57
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFD----KIIAQGHYTEKAAAALCRAIVNVVH 209
N+V++ G R+ V++ ME CSGG L + I H L + +H
Sbjct: 58 HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEG-LAYLH 116
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-----GKVYRDIVGSAYYV 264
G++HRD+KP N L D ++K DFG +V + G+ + + G+ Y+
Sbjct: 117 SH---GIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYM 170
Query: 265 APEVLRRS----YGKEIDVWSAGVILYILLSGVPPFWAE--TEKGIFDAILKGGVDFESE 318
APEV+ +G+ D+WS G ++ + +G P W+E E I + G +
Sbjct: 171 APEVITGGKGKGHGRAADIWSLGCVVLEMATGKRP-WSELDNEFQIMFHVGAGHKPPIPD 229
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
L +S KD + + L DPKKR T++E+L+HP+
Sbjct: 230 S-LQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 3e-33
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG L S+ YA K + K +++ + D E IM H + + IV+
Sbjct: 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQ 107
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
A++D + +++VME GG+L + +++ EK A +V + H MG +HR
Sbjct: 108 LHYAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI-VGSAYYVAPEVLRRS----- 272
D+KP+N LL D LK DFG + +D G V D VG+ Y++PEVL+
Sbjct: 167 DVKPDNMLL---DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGY 223
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDSAKDL 330
YG+E D WS GV LY +L G PF+A++ G + I+ K + F + IS AKDL
Sbjct: 224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDI--EISKQAKDL 281
Query: 331 VRKMLIQDPKK--RITSAEVLEHPWMR 355
+ L + R E+ HP+ +
Sbjct: 282 ICAFLTDREVRLGRNGVDEIKSHPFFK 308
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 4e-33
Identities = 81/277 (29%), Positives = 141/277 (50%), Gaps = 25/277 (9%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSI-LKRKLVNKQDREDIKREIQIMQHLS 152
+ +TL + +G+G FG Y + T A K I L+ + + EDI++EIQ +
Sbjct: 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCR 57
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
I ++ G++ + ++ME C GG D ++ G E A + R ++ + + H
Sbjct: 58 -SPYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLH 115
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLRR 271
G +HRD+K N LLS +G +K DFG+S + R+ VG+ +++APEV+++
Sbjct: 116 EEGKIHRDIKAANILLSE-EG--DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQ 172
Query: 272 S-YGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAILKGGVDFESEPWLL----IS 324
S Y ++ D+WS G+ L G PP ++ + +F I K + P L S
Sbjct: 173 SGYDEKADIWSLGITAIELAKGEPPL-SDLHPMRVLF-LIPK------NNPPSLEGNKFS 224
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361
KD V L +DPK+R ++ E+L+H ++++ + S
Sbjct: 225 KPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTS 261
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 127 bits (319), Expect = 7e-33
Identities = 82/264 (31%), Positives = 148/264 (56%), Gaps = 19/264 (7%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
++G G GI + E +G A K + RK +Q RE + E+ IM+ QN+VE
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HQNVVEM 83
Query: 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220
+Y + + ++ME GG L D I++Q E+ A +C +++ + + H GV+HRD
Sbjct: 84 YKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSAYYVAPEVLRRS-YGKEID 278
+K ++ LL+ DG +K +DFG I + R +VG+ Y++APEV+ R+ YG E+D
Sbjct: 143 IKSDSILLT-LDG--RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVD 199
Query: 279 VWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+WS G+++ ++ G PP+++++ K + D+ + IS +D + +M
Sbjct: 200 IWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHK-----ISPVLRDFLERM 254
Query: 335 LIQDPKKRITSAEVLEHPWMREGG 358
L ++P++R T+ E+L+HP++ + G
Sbjct: 255 LTREPQERATAQELLDHPFLLQTG 278
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 127 bits (319), Expect = 8e-33
Identities = 87/279 (31%), Positives = 152/279 (54%), Gaps = 17/279 (6%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
++G G GI + T S+G A K + RK +Q RE + E+ IM+ +N+VE
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEM 82
Query: 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220
+Y + +VME GG L D I+ E+ AA+C A++ + H GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 221 LKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRR-SYGKEID 278
+K ++ LL++ DG +K +DFG + E + +VG+ Y++APE++ R YG E+D
Sbjct: 142 IKSDSILLTH-DG--RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 198
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
+WS G+++ ++ G PP++ E I + + + + +S S K + ++L++D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLVRD 257
Query: 339 PKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377
P +R T+AE+L+HP++ + G S ++ M+Q R
Sbjct: 258 PAQRATAAELLKHPFLAKAGPP------SCIVPLMRQNR 290
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 8e-33
Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 16/271 (5%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
RQ+ LGK G FG C +TG YACK + K+++ ++ E QI++ ++
Sbjct: 3 RQYRVLGK----GGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN 58
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHH 210
Q +V AYE + ++ LV+ + +GG+L I G+ + E+ A I+ +
Sbjct: 59 -SQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLED 117
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
H ++RDLKPEN LL D ++ +D GL+V I EG+ R VG+ Y+APEVL
Sbjct: 118 LHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLN 174
Query: 271 -RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
+ Y D W G ++Y ++ G PF EK + + + ++ E S+ AK
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKS 234
Query: 330 LVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
+ + +L +DPK+R+ + EV HP+ R
Sbjct: 235 ICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-32
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 45/285 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + +G G +G Y TG A K I+ + + + E+IK E I++ S
Sbjct: 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIK-IMD---IIEDEEEEIKEEYNILRKYSNHP 63
Query: 156 NIVEFRGAYEDRQSVH--------LVMELCSGG---ELFDKIIAQGH-YTEKAAAALCRA 203
NI F GA+ + LVMELC GG +L + +G E+ A + R
Sbjct: 64 NIATFYGAF--IKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRE 121
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAY 262
+ + + H V+HRD+K +N LL K+ +K DFG+S +D R+ +G+ Y
Sbjct: 122 TLRGLAYLHENKVIHRDIKGQNILL-TKNAE--VKLVDFGVSAQLDSTLGRRNTFIGTPY 178
Query: 263 YVAPEV------LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAI------ 308
++APEV SY DVWS G+ L G PP + + +F
Sbjct: 179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL-CDMHPMRALFKIPRNPPPT 237
Query: 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
LK E W S D + + LI++ ++R E+LEHP+
Sbjct: 238 LK-----SPENW---SKKFNDFISECLIKNYEQRPFMEELLEHPF 274
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 2e-32
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 41/280 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + + +G+G FG S G K I + +++++ + E+ I++ L
Sbjct: 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HP 59
Query: 156 NIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQ-----GHYTEKAA----AALCRAI 204
NIV + DR Q++++VME C GG+L ++I + + E+ L A+
Sbjct: 60 NIVRYYDRIIDRSNQTLYIVMEYCEGGDL-AQLIQKCKKERKYIEEEFIWRILTQLLLAL 118
Query: 205 VNVVHHCHF-----MGVMHRDLKPEN-FLLSNKDGGAMLKATDFGLSVFIDEG----KVY 254
+ CH V+HRDLKP N FL +N + +K DFGL+ + K Y
Sbjct: 119 ----YECHNRSDPGNTVLHRDLKPANIFLDANNN----VKLGDFGLAKILGHDSSFAKTY 170
Query: 255 RDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313
VG+ YY++PE L SY ++ D+WS G ++Y L + PPF A + + I +G
Sbjct: 171 ---VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF 227
Query: 314 DFESEPWLLI-SDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
S ++++ ML DP KR ++ E+L+ P
Sbjct: 228 R----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-32
Identities = 83/264 (31%), Positives = 136/264 (51%), Gaps = 21/264 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
ELG G G+ TG A K+I R +N+ ++ I RE+ I+ IV
Sbjct: 7 GELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHK-CNSPYIVG 63
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKII--AQGHYTEKAAAALCRAIVNVVHHCH-FMGV 216
F GA+ + + + ME GG L DKI+ QG E+ + A++ + + H +
Sbjct: 64 FYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
+HRD+KP N L++++ +K DFG+S ++ + + VG++ Y+APE ++ Y
Sbjct: 123 IHRDVKPSNILVNSR---GQIKLCDFGVSGQLVNS--LAKTFVGTSSYMAPERIQGNDYS 177
Query: 275 KEIDVWSAGVILYILLSG-VP-PFWAETEKGIFDAILKGGVDFESEPWL---LISDSAKD 329
+ D+WS G+ L L +G P P + GIF+ +L+ V+ E P L S +D
Sbjct: 178 VKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE-LLQYIVN-EPPPRLPSGKFSPDFQD 235
Query: 330 LVRKMLIQDPKKRITSAEVLEHPW 353
V LI+DP++R + E+LEHP+
Sbjct: 236 FVNLCLIKDPRERPSYKELLEHPF 259
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 125 bits (314), Expect = 3e-32
Identities = 87/293 (29%), Positives = 154/293 (52%), Gaps = 25/293 (8%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D R++ ++G G GI + TE TG A K + RK +Q RE + E+ IM+
Sbjct: 19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRD 75
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+N+V+ +Y + +VME GG L D I+ E+ A +C +++ + +
Sbjct: 76 YH-HENVVDMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSY 133
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL 269
H GV+HRD+K ++ LL++ DG +K +DFG + E + +VG+ Y++APEV+
Sbjct: 134 LHNQGVIHRDIKSDSILLTS-DG--RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVI 190
Query: 270 RR-SYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGIFDAILKGGVDFESEPWLLIS 324
R YG E+D+WS G+++ ++ G PP++ E + I D + D +S
Sbjct: 191 SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHK-----VS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377
+ + ML+++P +R T+ E+L+HP+++ G S ++ M+Q+R
Sbjct: 246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP------SCIVPLMRQYR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 5e-32
Identities = 88/276 (31%), Positives = 135/276 (48%), Gaps = 26/276 (9%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P ED Y L + +G G +G Y + +TG A K I KL D E I++EI +
Sbjct: 1 PQED----YELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISM 53
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVN 206
++ NIV + G+Y R + +VME C GG L D + +G +E A +CR +
Sbjct: 54 LKECR-HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLK 112
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVA 265
+ + H G +HRD+K N LL +DG +K DFG+S + R +G+ Y++A
Sbjct: 113 GLAYLHETGKIHRDIKGANILL-TEDGD--VKLADFGVSAQLTATIAKRKSFIGTPYWMA 169
Query: 266 PEVL----RRSYGKEIDVWSAGVILYILLSGVPPFW-AETEKGIFDAILKGGVD----FE 316
PEV + Y + D+W+ G+ L PP + + +F I K +
Sbjct: 170 PEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISKSNFPPPKLKD 228
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
E W S D ++K L +DPKKR T+ ++L+HP
Sbjct: 229 KEKW---SPVFHDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 2e-31
Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 31/280 (11%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN--I 157
K + G +G YL T +A K I K+ L+ + + + E I L+ +N +
Sbjct: 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDI---LTFAENPFV 63
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
V ++E ++ + +VME GG+ + G A V + + H G++
Sbjct: 64 VSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIV 123
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS--------VFIDEGKVYRD--------IVGSA 261
HRDLKP+N L+++ +K TDFGLS + EG + +D + G+
Sbjct: 124 HRDLKPDNLLITSM---GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTP 180
Query: 262 YYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF-ESEP 319
Y+APEV LR+ YGK +D W+ G+ILY L G PF+ +T + +F ++ +++ E +
Sbjct: 181 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDE 240
Query: 320 WLLISDSAKDLVRKMLIQDPKKRI---TSAEVLEHPWMRE 356
L A+DL+ ++L Q+P +R+ + EV +H +
Sbjct: 241 AL--PADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 4e-31
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 61/297 (20%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQN 156
+G G +G+ C +TG A K K +D ED+K RE+++++ L +N
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIK-----KFKESEDDEDVKKTALREVKVLRQLR-HEN 61
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV--------NVV 208
IV + A+ + ++LV E L E + L V +
Sbjct: 62 IVNLKEAFRRKGRLYLVFEYVERTLL--------ELLEASPGGLPPDAVRSYIWQLLQAI 113
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--VYRDIVGSAYYVAP 266
+CH ++HRD+KPEN L+S +LK DFG + + D V + +Y AP
Sbjct: 114 AYCHSHNIIHRDIKPENILVSESG---VLKLCDFGFARALRARPASPLTDYVATRWYRAP 170
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GGVD------FE 316
E+L +YGK +DVW+ G I+ LL G P F +++ I K G + F
Sbjct: 171 ELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230
Query: 317 SEPWL--------------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
S P +S A D ++ L DPK+R+T E+L+HP+
Sbjct: 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 122 bits (306), Expect = 8e-31
Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 59
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 60 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 119
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 120 DIKLENLML-DKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 232
Query: 338 DPKKRI-----TSAEVLEH 351
DPK+R+ + EV+EH
Sbjct: 233 DPKQRLGGGPSDAKEVMEH 251
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-30
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L T YA K + K ++ D E E +++ + +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ + + VME +GG+L I G + E A IV + H G+++R
Sbjct: 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----IVGSAYYVAPEVLR-RSYG 274
DLK +N LL D +K DFG+ EG + G+ Y+APE+L + YG
Sbjct: 121 DLKLDNVLL---DSEGHIKIADFGMC---KEGILGGVTTSTFCGTPDYIAPEILSYQPYG 174
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+D W+ GV+LY +L+G PF + E +F +IL+ V + WL S AK +++
Sbjct: 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR--WL--SKEAKSILKSF 230
Query: 335 LIQDPKKRITS-----AEVLEHPWMRE 356
L ++P+KR+ ++ HP+ RE
Sbjct: 231 LTKNPEKRLGCLPTGEQDIKGHPFFRE 257
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 37/276 (13%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+GRG FG + E +TG+ YA K + K L+ ++ + E I+ +S I + +
Sbjct: 9 VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILS-ISNSPWIPQLQ 67
Query: 162 GAYEDRQSVHLVMELCSGGEL----------FDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
A++D+ +++LVME GG+L FD+ +AQ + E +V +H
Sbjct: 68 YAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAE---------LVLAIHSV 118
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI-VGSAYYVAPEVL 269
H MG +HRD+KPEN L+ D +K DFG + + V + VG+ Y+APEVL
Sbjct: 119 HQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVL 175
Query: 270 -------RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPW 320
+ +YG E D WS GVI Y ++ G PF T ++ I+ + + F +P
Sbjct: 176 TTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDP- 234
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S DL++ +L K+R+ + HP+ +
Sbjct: 235 -KVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 3e-30
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DE 506
NGTID+ EF++ M R + D E + +AF+ FD+D +G+I+ EL M + G +
Sbjct: 61 NGTIDFPEFLT-LMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTD 119
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG+INYEEF MM S
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFVKMMMS 148
|
Length = 149 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 3e-30
Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 18/280 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A K + L + +E I EI +M+
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQM---NLQQQPKKELIINEILVMRE 72
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 73 NK-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 130
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 131 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLISDSA 327
R++YG ++D+WS G++ ++ G PP+ E + ++ G + ++ L S
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKL--SAIF 245
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGS 367
+D + + L D +KR ++ E+L+HP+++ KP+ S
Sbjct: 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKIA-----KPLSS 280
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 4e-30
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 14/262 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + K+LG+G +G Y S YA K + +++++RED EI+I+ ++
Sbjct: 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEV-DLGSMSQKEREDAVNEIRILASVN-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCRAIVNVVHHC 211
NI+ ++ A+ D + +VME G+L I + E+ + ++ +
Sbjct: 60 NIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL 119
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR- 270
H ++HRDLK N LL D ++K D G+S + + I G+ +Y+APEV +
Sbjct: 120 HEQKILHRDLKSANILLVAND---LVKIGDLGISKVLKKNMAKTQI-GTPHYMAPEVWKG 175
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
R Y + D+WS G +LY + + PPF A + + + + +G + S ++
Sbjct: 176 RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIY---SQDLQNF 232
Query: 331 VRKMLIQDPKKRITSAEVLEHP 352
+R ML PK R ++L P
Sbjct: 233 IRSMLQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 4e-30
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 12/261 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + LG+G FG L + K + +L K+ R D EI I+ L
Sbjct: 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKE-RRDALNEIVILSLLQ-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHF 213
NI+ + + D ++ + ME +GG L+DKI+ Q + E+ IV+ V + H
Sbjct: 60 NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK 119
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR-R 271
G++HRD+K N L K G ++K DFG+S + E + +VG+ YY++PE+ +
Sbjct: 120 AGILHRDIKTLNIFL-TKAG--LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGV 176
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + D+W+ G +LY LL+ F A + I++G + S LV
Sbjct: 177 KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSELISLV 233
Query: 332 RKMLIQDPKKRITSAEVLEHP 352
+L QDP+KR T+ EVL+ P
Sbjct: 234 HSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 5e-30
Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 16/272 (5%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
RQ+ LGK G FG C +TG YACK + K+++ ++ E QI++ ++
Sbjct: 3 RQYRVLGK----GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN 58
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--IAQGHYTEKAAAALCRAIVNVVHH 210
+ +V AYE + ++ LV+ L +GG+L I + + + E A I +
Sbjct: 59 -SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED 117
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
H +++RDLKPEN LL D ++ +D GL+V + EG+ + VG+ Y+APEV++
Sbjct: 118 LHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK 174
Query: 271 RS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
Y D W+ G +LY +++G PF +K + + + + + E S A+
Sbjct: 175 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARS 234
Query: 330 LVRKMLIQDPKKRI-----TSAEVLEHPWMRE 356
L + +L +DPK+R+ + EV EHP ++
Sbjct: 235 LCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 1e-29
Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G + + +TG A K I L + +E I EI +M+
Sbjct: 16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQI---NLQKQPKKELIINEILVMKE 72
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
L NIV F ++ + +VME +GG L D ++ + E AA+CR + +
Sbjct: 73 LK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEF 130
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HRD+K +N LL +K TDFG I + R +VG+ Y++APEV+
Sbjct: 131 LHANQVIHRDIKSDNVLLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SPIFR 246
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+L+HP+++
Sbjct: 247 DFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 1e-29
Identities = 89/311 (28%), Positives = 128/311 (41%), Gaps = 78/311 (25%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHL 151
Y E+G G +G Y + +TG A K + E I REI +++ L
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVP-----LSEEGIPLSTLREIALLKQL 55
Query: 152 SGQQ--NIVE----FRGAYEDRQ-SVHLVMELCSGGELFDKIIAQGHYTEKAAAA----- 199
+ NIV G DR+ + LV E D+ +A Y K
Sbjct: 56 ESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHV------DQDLAT--YLSKCPKPGLPPE 107
Query: 200 ----LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR 255
L R ++ V H ++HRDLKP+N +L DG +K DFGL+ ++Y
Sbjct: 108 TIKDLMRQLLRGVDFLHSHRIVHRDLKPQN-ILVTSDG--QVKIADFGLA------RIYS 158
Query: 256 D------IVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGI 304
+V + +Y APEVL + SY +D+WS G I L P F +E I
Sbjct: 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKI 218
Query: 305 FDAILKGGVDFESE-------PW---------------LLISDSAKDLVRKMLIQDPKKR 342
FD I G+ E E P I + DL++KML +P KR
Sbjct: 219 FDVI---GLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKR 275
Query: 343 ITSAEVLEHPW 353
I++ E L+HP+
Sbjct: 276 ISAFEALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 25/292 (8%)
Query: 69 KSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT-ENSTGNSYACKSI 127
K S ++ P +K + ED + + LG G FG L T +N A K
Sbjct: 13 KDSDSTKEPKRKNKM----KYED----FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRF 64
Query: 128 LKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII 187
K K++ ++ + + E +I+ +++ V G+++D ++LV+E GGE F +
Sbjct: 65 EKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLR 123
Query: 188 AQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247
+ IV + + + +++RDLKPEN LL +KDG +K TDFG +
Sbjct: 124 RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL-DKDG--FIKMTDFGFAKV 180
Query: 248 IDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD 306
+D + Y + G+ Y+APE+L +GK D W+ G+ +Y +L G PPF+A I+
Sbjct: 181 VDT-RTY-TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ 238
Query: 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPW 353
IL+G + F + ++ K L++K+L D KR + V EHPW
Sbjct: 239 KILEGIIYFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-29
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 17/261 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR-EDIKREIQIMQHLSGQQ--NIV 158
+GRG +G Y TG A K I L D DI+RE+ ++ L Q NI
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALKII---NLDTPDDDVSDIQREVALLSQLRQSQPPNIT 65
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
++ G+Y + ++ME GG + + A G EK + + R ++ + + H +GV+H
Sbjct: 66 KYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIH 124
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR--RSYGK 275
RD+K N L++N G L DFG++ +++ R VG+ Y++APEV+ + Y
Sbjct: 125 RDIKAANILVTN-TGNVKL--CDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDT 181
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD-FESEPWLLISDSAKDLVRKM 334
+ D+WS G+ +Y + +G PP+ I K E + S ++ V
Sbjct: 182 KADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGY---SKLLREFVAAC 238
Query: 335 LIQDPKKRITSAEVLEHPWMR 355
L ++PK+R+++ E+L+ W++
Sbjct: 239 LDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-29
Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 32/276 (11%)
Query: 96 YTLGKELGRGQFGITY--LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
Y L + +G G + Y +C N A K I K + +++++E+Q M
Sbjct: 3 YELIEVIGVGATAVVYAAICLPN--NEKVAIKRIDLEKC--QTSVDELRKEVQAMS-QCN 57
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFD---KIIAQGHYTEKAAAALCRAIVNVVHH 210
N+V++ ++ + LVM SGG L D +G E A + + ++ + +
Sbjct: 58 HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-----KVYRDIVGSAYYVA 265
H G +HRD+K N LL +DG +K DFG+S + +G KV + VG+ ++A
Sbjct: 118 LHSNGQIHRDIKAGNILL-GEDGS--VKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG-------GVDFE 316
PEV+ Y + D+WS G+ L +G P+ + L+ G D++
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
S S + ++ L +DP KR T+ E+L+H
Sbjct: 235 K-----YSKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 3e-29
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 15/263 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L +G YA K + K ++ D E E +I+ + +
Sbjct: 3 LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ + VME +GG+L I + E A I + + H G+++RDL
Sbjct: 63 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDL 122
Query: 222 KPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDV 279
K +N LL D K DFG+ I GK G+ Y+APE+L+ YG +D
Sbjct: 123 KLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDW 179
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L G PF AE E +F+AIL V + + WL S A D+++ + ++P
Sbjct: 180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--WL--SQDAVDILKAFMTKNP 235
Query: 340 KKRITSAE------VLEHPWMRE 356
R+ S +L HP+ +E
Sbjct: 236 TMRLGSLTLGGEEAILRHPFFKE 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 4e-29
Identities = 84/266 (31%), Positives = 138/266 (51%), Gaps = 20/266 (7%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG C +TG YACK + K++L ++ + E +I++ +S + IV
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLA 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKI--IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
A+E + + LVM L +GG+L I + + + E A I+ + H H +++R
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEID 278
DLKPEN LL + G ++ +D GL+V + GK + G+ Y+APEVL+ Y +D
Sbjct: 120 DLKPENVLLDD-HGN--VRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVD 176
Query: 279 VWSAGVILYILLSGVPPFWAETEK----GIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
++ G LY +++G PF EK + L+ V++ + S AKDL +
Sbjct: 177 WFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK----FSPEAKDLCEAL 232
Query: 335 LIQDPKKRI-----TSAEVLEHPWMR 355
L +DP+KR+ ++ EV EHP +
Sbjct: 233 LQKDPEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 7e-29
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 52/301 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG L + TG+ YA K + K +++ K+ ++ E I+ + +V+
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++L+ME GG++ ++ + +TE+ + + H +G +HR
Sbjct: 66 LYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDI------------------- 257
D+KP+N LL K +K +DFGL + + YR +
Sbjct: 126 DIKPDNLLLDAK---GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSK 182
Query: 258 -----------------VGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAE 299
VG+ Y+APEV L+ Y KE D WS GVI+Y +L G PPF ++
Sbjct: 183 RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSD 242
Query: 300 TEKGIFDAIL--KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA---EVLEHPWM 354
+ + I+ K + F E + +S AKDL++++ + ++R+ + E+ HP+
Sbjct: 243 NPQETYRKIINWKETLQFPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299
Query: 355 R 355
+
Sbjct: 300 K 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 79/262 (30%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG C +TG YACK + K+++ ++ E QI++ ++ + +V
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLA 66
Query: 162 GAYEDRQSVHLVMELCSGGELFDKI--IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
AYE + ++ LV+ L +GG+L I + + E+ A I + H +++R
Sbjct: 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYR 126
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEID 278
DLKPEN LL D ++ +D GL+V I EG+ R VG+ Y+APEV++ Y D
Sbjct: 127 DLKPENILL---DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPD 183
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W G ++Y ++ G PF EK + + + + + E S++A+ + R++L +D
Sbjct: 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKD 243
Query: 339 PKKRI-----TSAEVLEHPWMR 355
P R+ + EV HP+ R
Sbjct: 244 PGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 87/271 (32%), Positives = 140/271 (51%), Gaps = 18/271 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K +GRG FG L S+ YA K + K +++ + D E IM +
Sbjct: 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 103
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ A++D + +++VME GG+L + +++ EK A +V + H MG
Sbjct: 104 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 162
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI-VGSAYYVAPEVLRRS- 272
++HRD+KP+N LL D LK DFG + +DE G V D VG+ Y++PEVL+
Sbjct: 163 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQG 219
Query: 273 ----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDS 326
YG+E D WS GV L+ +L G PF+A++ G + I+ K ++F + + IS
Sbjct: 220 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEISKH 277
Query: 327 AKDLVRKMLIQDPKK--RITSAEVLEHPWMR 355
AK+L+ L + R E+ +HP+ +
Sbjct: 278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFK 308
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 76/262 (29%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G+G FG L + G YA K + K+ ++ K++++ I E ++ +V
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++ ++ V++ +GGELF + + + E A I + + + H + +++R
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEI 277
DLKPEN LL ++ G +L TDFGL I+ K G+ Y+APEVLR+ Y + +
Sbjct: 121 DLKPENILLDSQ-GHVVL--TDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTV 177
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W G +LY +L G+PPF++ ++D IL + + IS SA+ L+ +L +
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPN----ISVSARHLLEGLLQK 233
Query: 338 DPKKRITSA----EVLEHPWMR 355
D KR+ + E+ H +
Sbjct: 234 DRTKRLGAKDDFLEIKNHVFFS 255
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-28
Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I+ LK F D D G I EL L LG SE E+ +L + D GN T+
Sbjct: 14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID-AGNETV 72
Query: 454 DYIEFISATMHRY--RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-GDEASIK 510
D+ EF++ M R +++E L +AF+ FDKD+ GYI+ EL +K G + ++
Sbjct: 73 DFPEFLTV-MSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVE 131
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
+++ E D D DG I+YEEF ++
Sbjct: 132 KLLKEYDEDGDGEIDYEEFKKLI 154
|
Length = 160 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 2e-28
Identities = 79/262 (30%), Positives = 138/262 (52%), Gaps = 15/262 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E ++G YA K + K ++ K + E +++++ + +
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTS 59
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ +++ + + VME +GGELF + + ++E IV+ + + H +++R
Sbjct: 60 LKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYR 119
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
DLK EN +L +KDG +K TDFGL I + + G+ Y+APEVL YG+ +
Sbjct: 120 DLKLENLML-DKDG--HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAV 176
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F P L +D AK L+ +LI+
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKF---PRTLSAD-AKSLLSGLLIK 232
Query: 338 DPKKRI-----TSAEVLEHPWM 354
DP KR+ + E++ H +
Sbjct: 233 DPNKRLGGGPDDAKEIMRHSFF 254
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 2e-28
Identities = 75/263 (28%), Positives = 133/263 (50%), Gaps = 12/263 (4%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG C +TG YACK + K+++ ++ E +I++ ++ + +V
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLA 66
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHR 219
AYE + ++ LV+ + +GG+L I G+ + E+ A + + +++R
Sbjct: 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYR 126
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEID 278
DLKPEN LL D ++ +D GL+V I EG+ R VG+ Y+APEV+ Y D
Sbjct: 127 DLKPENILL---DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPD 183
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W G ++Y ++ G PF E+ + + + + + E S+ AK + R +L ++
Sbjct: 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKN 243
Query: 339 PKKRI-----TSAEVLEHPWMRE 356
PK+R+ +A V +HP +
Sbjct: 244 PKERLGCRGNGAAGVKQHPIFKN 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L T YA K + K ++ D E E +++ + +
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ ++ VME +GG+L I G + E A I + H G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 222 KPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEIDV 279
K +N +L D +K DFG+ I GK R G+ Y+APE + + YGK +D
Sbjct: 128 KLDNVML---DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L+G PPF E E +F +I++ V + +S A + + +L + P
Sbjct: 185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKGLLTKHP 240
Query: 340 KKRITSA-----EVLEHPWMR 355
KR+ ++ EH + R
Sbjct: 241 AKRLGCGPTGERDIREHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 114 bits (285), Expect = 3e-28
Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A K + L + +E I EI +M+
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQM---NLQQQPKKELIINEILVMRE 72
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 73 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDF 130
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 131 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERL-SAVFR 246
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +R ++ E+L+HP+++
Sbjct: 247 DFLNRCLEMDVDRRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 5e-28
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 45/294 (15%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG L + TG+ YA K + K ++ K+ I+ E I+ G +V+
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D+++++L+ME GG++ ++ + +E+A V + H +G +HR
Sbjct: 66 MFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEG---KVYRDI------------------- 257
D+KP+N LL D +K +DFGL + + + YR++
Sbjct: 126 DIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKA 182
Query: 258 --------------VGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302
VG+ Y+APEV ++ Y K D WS GVI+Y +L G PPF +ET +
Sbjct: 183 ETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242
Query: 303 GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE---HPW 353
+ ++ P + IS+ AKDL+ + D + RI S V E HP+
Sbjct: 243 ETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPF 295
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 5e-28
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 16/260 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K +V K + E +++Q+ S +
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 59
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMH 218
+ +++ + VME +GGELF + + ++E A IV+ + + H V++
Sbjct: 60 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 119
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
RDLK EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 120 RDLKLENLML-DKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 176
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
+D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L
Sbjct: 177 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLSGLLK 232
Query: 337 QDPKKRI-----TSAEVLEH 351
+DPK+R+ + E+++H
Sbjct: 233 KDPKQRLGGGPDDAKEIMQH 252
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 7e-28
Identities = 80/267 (29%), Positives = 134/267 (50%), Gaps = 20/267 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE--DIKREIQIMQHLSG 153
+ LGK LG+G FG YLC + TG A K + + +E ++ EIQ++++L
Sbjct: 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL- 62
Query: 154 QQNIVEFRGAYEDRQ--SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
+ IV++ G D ++ + ME GG + D++ + G TE R I+ V +
Sbjct: 63 HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYL 122
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFG----LSVFIDEGKVYRDIVGSAYYVAPE 267
H ++HRD+K N L +D +K DFG L G + + G+ Y+++PE
Sbjct: 123 HSNMIVHRDIKGANIL---RDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPE 179
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LIS 324
V+ YG++ D+WS G + +L+ PP WAE E AI K + P L +S
Sbjct: 180 VISGEGYGRKADIWSVGCTVVEMLTEKPP-WAEFEA--MAAIFKIATQ-PTNPVLPPHVS 235
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351
D +D ++++ ++ K R ++ E+L H
Sbjct: 236 DHCRDFLKRIFVE-AKLRPSADELLRH 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 7e-28
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN--IVE 159
LGRG FG L TG YA K++ K ++ + + E + E +I + + +++ +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ V VME +GG+L I ++E A +V + + H +++R
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----IVGSAYYVAPEVL-RRSYG 274
DLK +N LL D +K DFGL EG + D G+ ++APEVL SY
Sbjct: 126 DLKLDNLLL---DTEGFVKIADFGLC---KEGMGFGDRTSTFCGTPEFLAPEVLTETSYT 179
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+ +D W GV++Y +L G PF + E+ +FD+I+ V + P L ++ ++R++
Sbjct: 180 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY---PRFLSREAIS-IMRRL 235
Query: 335 LIQDPKKRITSAE-----VLEHPWMR 355
L ++P++R+ S E V + P+ R
Sbjct: 236 LRRNPERRLGSGEKDAEDVKKQPFFR 261
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 83/295 (28%), Positives = 127/295 (43%), Gaps = 64/295 (21%)
Query: 105 GQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK------REIQIMQHLSGQQNIV 158
G +G+ Y + TG A K + K ++E REI I+ L NIV
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKL-------KMEKEKEGFPITSLREINILLKLQ-HPNIV 67
Query: 159 EFR----GAYEDRQSVHLVME-----LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ G+ D +++VME L S E + Q L +++ V
Sbjct: 68 TVKEVVVGSNLD--KIYMVMEYVEHDLKSLMETMKQPFLQSE-----VKCLMLQLLSGVA 120
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEV 268
H H ++HRDLK N LL+N+ +LK DFGL+ + K Y +V + +Y APE+
Sbjct: 121 HLHDNWILHRDLKTSNLLLNNR---GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPEL 177
Query: 269 L--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK---------------- 310
L + Y ID+WS G I LL+ P F ++E + I K
Sbjct: 178 LLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237
Query: 311 ---GGVDFESEPW---------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
F P+ L +SD+ DL+ ++L DP KRI++ + L+HP+
Sbjct: 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 82/293 (27%), Positives = 128/293 (43%), Gaps = 47/293 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-----REIQIMQH 150
Y + ++G G F TG YA K + K+ + ++ REIQ ++
Sbjct: 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCM-------KKHFKSLEQVNNLREIQALRR 53
Query: 151 LSGQQNIVEFRGAYEDRQ--SVHLVMELCSGGELFDKIIAQGHY-TEKAAAALCRAIVNV 207
LS NI+ DR+ + LV EL L++ I + EK + ++
Sbjct: 54 LSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKS 112
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ H H G+ HRD+KPEN L+ + +LK DFG I Y + + + +Y APE
Sbjct: 113 LDHMHRNGIFHRDIKPENILIKDD----ILKLADFGSCRGIYSKPPYTEYISTRWYRAPE 168
Query: 268 VLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFD-------AILKG--- 311
L YG ++D+W+ G + + +LS P F E I D +LK
Sbjct: 169 CLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228
Query: 312 ----GVDFESE-----PWLL--ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
+F S+ LL S DL++K+L DP +RIT+ + L HP+
Sbjct: 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 1e-27
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 19/264 (7%)
Query: 100 KELGRGQFGITYLC---TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
K LG+G FG +L T G YA K +LK+ + +DR K E I+ +
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMK-VLKKATLKVRDRVRTKMERDILAEV-NHPF 59
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGV 216
IV+ A++ ++L+++ GG+LF ++ + +TE+ + + H H +G+
Sbjct: 60 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 119
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-RRSYG 274
++RDLKPEN LL D +K TDFGLS ID K G+ Y+APEV+ RR +
Sbjct: 120 IYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 176
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+ D WS GV+++ +L+G PF + K ILK + P L S A+ L+R +
Sbjct: 177 QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL---GMPQFL-SPEAQSLLRAL 232
Query: 335 LIQDPKKRITSA-----EVLEHPW 353
++P R+ + E+ HP+
Sbjct: 233 FKRNPANRLGAGPDGVEEIKRHPF 256
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 1e-27
Identities = 87/289 (30%), Positives = 132/289 (45%), Gaps = 28/289 (9%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ + + ELG G FG Y TG A K I ++ ++++ ED EI I+
Sbjct: 1 VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKII---QIESEEELEDFMVEIDILS 57
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVV 208
NIV AY + +++E C GG L ++ TE +CR ++ +
Sbjct: 58 ECK-HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEAL 116
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+ H V+HRDLK N LL+ DG +K DFG+S RD +G+ Y++APE
Sbjct: 117 NFLHSHKVIHRDLKAGNILLT-LDGD--VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPE 173
Query: 268 VL------RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
V+ Y + D+WS G+ L L PP + ILK SEP
Sbjct: 174 VVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK------SEPPT 227
Query: 322 LI-----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
L S S D ++ L++DP R T+AE+L+HP++ + +K I
Sbjct: 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS--DNKAI 274
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 40/274 (14%)
Query: 97 TLGKELGRGQFGITYLCT-ENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQHLS 152
TLGK+LG G FG Y + G A K++ + ++Q E+ RE +IM+ L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKLD 59
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL--------CRAI 204
N+V+ G + + +++VME GG+L Y K L I
Sbjct: 60 -HPNVVKLLGVCTEEEPLYIVMEYMEGGDL-------LSYLRKNRPKLSLSDLLSFALQI 111
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA--Y 262
+ + +HRDL N L+ ++K +DFGLS + + YR G
Sbjct: 112 ARGMEYLESKNFIHRDLAARNCLVGENL---VVKISDFGLSRDLYDDDYYRKRGGKLPIR 168
Query: 263 YVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320
++APE L+ + + DVWS GV+L+ + + G P+ + + + + + G
Sbjct: 169 WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYR------- 221
Query: 321 LLISDSAKDLVRKMLIQ----DPKKRITSAEVLE 350
L + + +++Q DP+ R T +E++E
Sbjct: 222 LPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVE 255
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 53/304 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G FG L + T YA K++ K ++ + +K E I+ + + +V+
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D+ +++ VM+ GG++ +I G + E A + + H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL---------SVFIDEGKVYR--------------- 255
D+KP+N L+ ++DG +K TDFGL S + +G +R
Sbjct: 126 DIKPDNILI-DRDG--HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182
Query: 256 --------------------DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVP 294
+VG+ Y+APEVL R+ Y + D WS GVILY +L G P
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242
Query: 295 PFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS---AEVLEH 351
PF A+T ++ +S A DL+ + L + R+ E+ H
Sbjct: 243 PFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCCGAEDRLGKNGADEIKAH 301
Query: 352 PWMR 355
P+ +
Sbjct: 302 PFFK 305
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SAIFR 247
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+L+H +++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 2e-27
Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 18/271 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K +GRG FG L ST YA K + K +++ + D E IM +
Sbjct: 45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 103
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ A++D + +++VME GG+L + +++ EK A +V + H MG
Sbjct: 104 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 162
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI-VGSAYYVAPEVLRRS- 272
+HRD+KP+N LL D LK DFG + ++ EG V D VG+ Y++PEVL+
Sbjct: 163 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 219
Query: 273 ----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDS 326
YG+E D WS GV LY +L G PF+A++ G + I+ K + F + IS
Sbjct: 220 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN--DISKE 277
Query: 327 AKDLVRKMLIQDPKK--RITSAEVLEHPWMR 355
AK+L+ L + R E+ H + +
Sbjct: 278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFK 308
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 72/254 (28%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G+G FG L S G+ YA K + K+ ++ K+++ I E ++ +V
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++ + ++ V++ +GGELF + + + E A + + + + H + +++R
Sbjct: 61 LHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEI 277
DLKPEN LL ++ G +L TDFGL ++ + G+ Y+APEVLR+ Y + +
Sbjct: 121 DLKPENILLDSQ-GHVVL--TDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTV 177
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W G +LY +L G+PPF++ ++D IL + + +A DL+ +L +
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGK----TVAACDLLVGLLHK 233
Query: 338 DPKKRITS-AEVLE 350
D ++R+ + A+ LE
Sbjct: 234 DQRRRLGAKADFLE 247
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 3e-27
Identities = 75/265 (28%), Positives = 138/265 (52%), Gaps = 16/265 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K++G G FG L G Y K I K+ K+ RE+ ++E+ ++ ++
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKE-REESRKEVAVLSNMK-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHF 213
NIV+++ ++E+ ++++VM+ C GG+L+ KI AQ + E I + H H
Sbjct: 60 NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR-R 271
++HRD+K +N L+ KDG +K DFG++ V ++ R +G+ YY++PE+ R
Sbjct: 120 RKILHRDIKSQNIFLT-KDG--TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR 176
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA--KD 329
Y + D+W+ G +LY + + F A K + I++G S P + S ++
Sbjct: 177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG-----SYPPVSSHYSYDLRN 231
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
LV ++ ++P+ R + +LE ++
Sbjct: 232 LVSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 3e-27
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 20/268 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE--DIKREIQIMQHLSG 153
+ LGK LGRG FG YLC + TG A K + + +E ++ EIQ++++L
Sbjct: 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR- 62
Query: 154 QQNIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
IV++ G D + + + +E GG + D++ A G TE R I+ V +
Sbjct: 63 HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYL 122
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID----EGKVYRDIVGSAYYVAPE 267
H ++HRD+K N L +D +K DFG S I G + + G+ Y+++PE
Sbjct: 123 HSNMIVHRDIKGANIL---RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE 179
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--IS 324
V+ YG++ DVWS + +L+ PP WAE E AI K ++P L +S
Sbjct: 180 VISGEGYGRKADVWSVACTVVEMLTEKPP-WAEYEA--MAAIFKIATQ-PTKPMLPDGVS 235
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHP 352
D+ +D ++++ +++ K+R T+ +L HP
Sbjct: 236 DACRDFLKQIFVEE-KRRPTAEFLLRHP 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 4e-27
Identities = 83/266 (31%), Positives = 135/266 (50%), Gaps = 20/266 (7%)
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE--DIKREIQIMQHLSGQQN 156
GK LG+G FG YLC + TG A K + + +E ++ EIQ++++L +
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HER 65
Query: 157 IVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
IV++ G DR +++ + ME GG + D++ A G TE R I+ + + H
Sbjct: 66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFG----LSVFIDEGKVYRDIVGSAYYVAPEVLR 270
++HRD+K N L +D +K DFG L G R + G+ Y+++PEV+
Sbjct: 126 MIVHRDIKGANIL---RDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182
Query: 271 -RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSA 327
YG++ DVWS G + +L+ PP WAE E AI K + P L IS+ A
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEKPP-WAEYEA--MAAIFKIATQ-PTNPQLPSHISEHA 238
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPW 353
+D + + ++ + R ++ E+L HP+
Sbjct: 239 RDFLGCIFVE-ARHRPSAEELLRHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 4e-27
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 9/246 (3%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G+G FG L + YA K + K+ ++ K++ + I E ++ +V
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++ ++ V++ +GGELF + + + E A I + + + H + +++R
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEI 277
DLKPEN LL D + TDFGL I+ G+ Y+APEVL ++ Y + +
Sbjct: 121 DLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTV 177
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W G +LY +L G+PPF++ ++D IL + + I++SA+ L+ +L +
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQK 233
Query: 338 DPKKRI 343
D KR+
Sbjct: 234 DRTKRL 239
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 6e-27
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 97 TLGKELGRGQFGITYLCT-ENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQHLS 152
TLGK+LG G FG Y T + A K++ + ++Q E+ RE +IM+ L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDA--SEQQIEEFLREARIMRKLD 59
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY--TEKAAAALCRAIVNVVHH 210
NIV+ G + + + +VME GG+L D + + + I + +
Sbjct: 60 -HPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEY 118
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA--YYVAPEV 268
+HRDL N L+ ++K +DFGLS + + Y+ G ++APE
Sbjct: 119 LESKNFIHRDLAARNCLVGENL---VVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPES 175
Query: 269 LRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
L+ + + DVWS GV+L+ + + G P+ + + + + KG L +
Sbjct: 176 LKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYR-------LPKPPN 228
Query: 327 AKDLVRKMLIQ----DPKKRITSAEVLE 350
+ K+++Q DP+ R T +E++E
Sbjct: 229 CPPELYKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 7e-27
Identities = 100/363 (27%), Positives = 143/363 (39%), Gaps = 104/363 (28%)
Query: 96 YTLGKELGRGQFGITYLC----TENSTGNSYACKSI---------LKRKLVNKQDREDIK 142
Y L KELG+G +GI +C E S + A K I KR L
Sbjct: 2 YELIKELGQGAYGI--VCSARNAETSEEETVAIKKITNVFSKKILAKRAL---------- 49
Query: 143 REIQIMQHLSGQQNIVE-------FRGAYEDRQSVHLVMELCSGGELFDKIIAQG----- 190
RE+++++H G +NI F G + + ++L EL +II G
Sbjct: 50 RELKLLRHFRGHKNITCLYDMDIVFPGNFNE---LYLYEELMEAD--LHQIIRSGQPLTD 104
Query: 191 -HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
H+ LC + + H V+HRDLKP N LL N D LK DFGL+
Sbjct: 105 AHFQSFIYQILCG-----LKYIHSANVLHRDLKPGN-LLVNADC--ELKICDFGLARGFS 156
Query: 250 EGKVYRD-----IVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAE--- 299
E V + +Y APE++ +SY K IDVWS G IL LL P F +
Sbjct: 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV 216
Query: 300 ----------------------TEKG---IFDAILKGGVDFESEPWLLISDS--AKDLVR 332
+ K I F + + + A DL+
Sbjct: 217 DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPF---ESIFPNANPLALDLLE 273
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR-------AMNKLKKM 385
K+L DP KRI+ E LEHP++ + D+P+ K F +M +L+ M
Sbjct: 274 KLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQ------KPFDFSFESEDSMEELRDM 327
Query: 386 ALK 388
++
Sbjct: 328 IIE 330
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 9e-27
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 16/266 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L T YA K + K ++ D + E +I+ + +
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ + + VME +GG+L +I + E + + + H GV++R
Sbjct: 61 LHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEI 277
DLK +N LL D K DFG+ I G G+ Y+APE+L+ YG +
Sbjct: 121 DLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSV 177
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W+ GV++Y +++G PPF A+ E +F++IL V + WL S A +++ + +
Sbjct: 178 DWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV--WL--SKEAVSILKAFMTK 233
Query: 338 DPKKRI-------TSAEVLEHPWMRE 356
+P KR+ + +HP+ +E
Sbjct: 234 NPNKRLGCVASQGGEDAIKQHPFFKE 259
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-26
Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+GRG FGI +LC + K I ++ K +R + E Q+++ LS NI+E+
Sbjct: 8 VGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIEYY 65
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ + +++ +VME GG L + I + + E I+ +HH H ++HR
Sbjct: 66 ENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEID 278
DLK +N LL ++K DFG+S + +VG+ Y++PE+ + Y ++ D
Sbjct: 126 DLKTQNILLDKHK--MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSD 183
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
+W+ G +LY L S F A + I+ G S+ + S + L+ ML D
Sbjct: 184 IWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRY---SPDLRQLILSMLNLD 240
Query: 339 PKKRITSAEVLEHP 352
P KR ++++ P
Sbjct: 241 PSKRPQLSQIMAQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 2e-26
Identities = 73/257 (28%), Positives = 128/257 (49%), Gaps = 13/257 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G+G FG + T YA K+I K +V++ + E ++ ++ IV +
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLK 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+++ + ++LV+ +GGELF + +G + A ++ + + H V++RDL
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119
Query: 222 KPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDV 279
KPEN LL D + DFGL + + + G+ Y+APE+L Y K +D
Sbjct: 120 KPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L+G+PPF+ E ++ IL+ + F AKDL+ +L +DP
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDG----FDRDAKDLLIGLLSRDP 232
Query: 340 KKRITSA---EVLEHPW 353
+R+ E+ HP+
Sbjct: 233 TRRLGYNGAQEIKNHPF 249
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 4e-26
Identities = 82/270 (30%), Positives = 138/270 (51%), Gaps = 21/270 (7%)
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSI-LKRKLVNKQDR-----EDIKREIQIMQHLS 152
G +G G FG YL S+G A K + L + +DR + + REI +++ L
Sbjct: 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+NIV++ G+ D +++ +E GG + + G + E R I+ +++ H
Sbjct: 65 -HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH 123
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-------GKVYRDIVGSAYYVA 265
G++HRD+K N L+ NK G +K +DFG+S ++ + GS +++A
Sbjct: 124 NRGIIHRDIKGANILVDNKGG---IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA 180
Query: 266 PEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PEV+++ SY ++ D+WS G ++ +L+G PF T+ AI K G + E IS
Sbjct: 181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENASPEIPSNIS 237
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
A D + K D KR T+AE+L+HP++
Sbjct: 238 SEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 4e-26
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 29/276 (10%)
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-------REIQIMQHL 151
G+ +G+G +G YL +TG A K + + + K EI+ ++ L
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NIV++ G + + + +E GG + + G + E+ ++ + +
Sbjct: 66 D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYL 124
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-----IVGSAYYVAP 266
H G++HRDLK +N L+ D + K +DFG+S D+ +Y + + GS +++AP
Sbjct: 125 HSKGILHRDLKADNLLV---DADGICKISDFGISKKSDD--IYDNDQNMSMQGSVFWMAP 179
Query: 267 EVL---RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP---- 319
EV+ + Y ++D+WS G ++ + +G P W++ E A+ K G + P
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEE--AIAAMFKLGNKRSAPPIPPD 236
Query: 320 -WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ +S A D + +P R T+ E+L+HP++
Sbjct: 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 5e-26
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 19/263 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G+G FG L G YA K + K+ ++N+++++ I E ++ +V
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++ + ++ V++ +GGELF + + + E A I + + + H + +++R
Sbjct: 61 LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAPEVLRRS-YG 274
DLKPEN LL D + TDFGL EG D G+ Y+APEV+R+ Y
Sbjct: 121 DLKPENILL---DSQGHVVLTDFGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYD 174
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+D W G +LY +L G+PPF+ ++D IL + S +A ++ ++
Sbjct: 175 NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPG----ASLTAWSILEEL 230
Query: 335 LIQDPKKRITSA----EVLEHPW 353
L +D ++R+ + E+ EHP+
Sbjct: 231 LEKDRQRRLGAKEDFLEIQEHPF 253
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 41/269 (15%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG L + TG+ YA K + K ++ K+ I+ E I+ +V+
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW-VVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D+ +++L+ME GG++ ++ + TE+ V + H +G +HR
Sbjct: 66 MFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEG---KVYRDI------------------- 257
D+KP+N LL +K +K +DFGL + + + YR++
Sbjct: 126 DIKPDNLLLDSK---GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKA 182
Query: 258 --------------VGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302
VG+ Y+APEV ++ Y K D WS GVI+Y +L G PPF +ET +
Sbjct: 183 ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242
Query: 303 GIFDAILKGGVDFESEPWLLISDSAKDLV 331
+ ++ P + IS+ AKDL+
Sbjct: 243 ETYKKVMNWKETLIFPPEVPISEKAKDLI 271
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 12/261 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + ++G+G FG+ + + YA K I K+ N+++RE+ E +++ L
Sbjct: 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SS 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHF 213
I+ + ++ D+ +++VME G+L + Q E I+ + H H
Sbjct: 60 YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS 119
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RDIVGSAYYVAPEVLR-R 271
++HRD+K N L D +K D G++ + + + IVG+ YY++PE+ +
Sbjct: 120 KKILHRDIKSLNLFLDAYDN---VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y ++ DVW+ GV+LY +G PF A + + I++G S+ + S L+
Sbjct: 177 PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMY---SQQLAQLI 233
Query: 332 RKMLIQDPKKRITSAEVLEHP 352
+ L +D ++R + ++L +P
Sbjct: 234 DQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 53/305 (17%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQ 146
+ +F L + +G G +GI Y + ++G A K K+ +R+ I REI
Sbjct: 5 SVTEFEKLNR-IGEGTYGIVYRARDTTSGEIVALK-----KVRMDNERDGIPISSLREIT 58
Query: 147 IMQHLSGQQNIVEFRGAYEDRQ--SVHLVMELCSG--GELFDKIIAQGHYTEKAAAALCR 202
++ +L NIVE + + S+ LVME C L D + ++E L
Sbjct: 59 LLLNLR-HPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSESQVKCLML 115
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSA 261
++ + + H ++HRDLK N LL++K LK DFGL+ + K V +
Sbjct: 116 QLLRGLQYLHENFIIHRDLKVSNLLLTDK---GCLKIADFGLARTYGLPAKPMTPKVVTL 172
Query: 262 YYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI----------- 308
+Y APE+L +Y ID+W+ G IL LL+ P ++E D I
Sbjct: 173 WYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESI 232
Query: 309 --------LKGGVDFESEP---------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
L G +P WL S++ L+ +L+ DPKKR T+ E LE
Sbjct: 233 WPGFSDLPLVGKFTLPKQPYNNLKHKFPWL--SEAGLRLLNFLLMYDPKKRATAEEALES 290
Query: 352 PWMRE 356
+ +E
Sbjct: 291 SYFKE 295
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 4e-25
Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L T YA K + K ++ D E E +++ + +
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ ++ VME +GG+L I G + E A I + H G+++RDL
Sbjct: 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL 127
Query: 222 KPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDV 279
K +N +L D +K DFG+ + +G R G+ Y+APE++ + YGK +D
Sbjct: 128 KLDNVML---DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L+G PPF E E +F +I++ V + +S A + + ++ + P
Sbjct: 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKGLMTKHP 240
Query: 340 KKRITSA-----EVLEHPWMR 355
KR+ ++ EH + R
Sbjct: 241 SKRLGCGPEGERDIREHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 6e-25
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 30/266 (11%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG +TG YACK + K++L K + E +I++ ++ IV
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLA 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQG----------HYTEKAAAALCRAIVNVVHHC 211
A+E + + LVM L +GG+L I G HY+ + + H
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGIL--------HL 111
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR- 270
H M +++RD+KPEN LL D + +D GL+V + +GK G+ Y+APE+L+
Sbjct: 112 HSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE 168
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI----LKGGVDFESEPWLLISDS 326
Y +D ++ G +Y +++G PF EK + + L+ V FE + + ++
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNF---TEE 225
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHP 352
+KD+ R L + P+ R+ S E + P
Sbjct: 226 SKDICRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 7e-25
Identities = 91/292 (31%), Positives = 139/292 (47%), Gaps = 31/292 (10%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
ELG+G +G Y TG + A K I R +++ I E+ I+ H + IV+F
Sbjct: 8 ELGKGNYGSVYKVLHRPTGVTMAMKEI--RLELDESKFNQIIMELDIL-HKAVSPYIVDF 64
Query: 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN-VVHHCHFM----G 215
GA+ +V++ ME G L DK+ A G TE + R I VV F+
Sbjct: 65 YGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR---- 271
++HRD+KP N L++ +K DFG+S + + + +G Y+APE ++
Sbjct: 124 IIHRDVKPTNVLVNGN---GQVKLCDFGVSGNL-VASLAKTNIGCQSYMAPERIKSGGPN 179
Query: 272 ---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF---DAILKGGVDFESEPWLL--I 323
+Y + DVWS G+ + + G P+ ET IF AI+ G P L
Sbjct: 180 QNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG-----DPPTLPSGY 234
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQ 375
SD A+D V K L + P +R T A++LEHPW+ + A D + V +K+
Sbjct: 235 SDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA-DVDMAEWVTGALKR 285
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 9e-25
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 47/313 (15%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK---RKLVNKQDREDIKREIQI 147
+I Y + +G G FG+ + TG + A K I+K ++ K+ RE+++
Sbjct: 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKR----TYRELKL 62
Query: 148 MQHLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++HL +NI+ + + ++ V EL G +++ ++ I+
Sbjct: 63 LKHLR-HENIISLSDIFISPLEDIYFVTELL--GTDLHRLLTSRPLEKQFIQYFLYQILR 119
Query: 207 VVHHCHFMGVMHRDLKPENFLLS-NKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ + H GV+HRDLKP N L++ N D LK DFGL+ D V + YY A
Sbjct: 120 GLKYVHSAGVVHRDLKPSNILINENCD----LKICDFGLARIQDPQMT--GYVSTRYYRA 173
Query: 266 PEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL-------------- 309
PE++ + Y E+D+WSAG I +L G P F + F I
Sbjct: 174 PEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233
Query: 310 --KGGVDF-----ESEPWLL------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ + F + EP SA DL+ KML+ DP+KRI++AE L HP++
Sbjct: 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293
Query: 357 GGEASDKPIGSAV 369
+ +D+P+
Sbjct: 294 YHDPTDEPVAEEK 306
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 41/292 (14%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F LG +G G +G+ C T A K K N++ +E RE+++++ L
Sbjct: 2 KFEVLGV-VGEGAYGVVLKCRHKETKEIVAIKK-FKDSEENEEVKETTLRELKMLRTLK- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
Q+NIVE + A+ R ++LV E EL +++ G EK + + + ++ +H C
Sbjct: 59 QENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQ-LIKAIHWC 116
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--VYRDIVGSAYYVAPEVL 269
H ++HRD+KPEN L+S+ D +LK DFG + + EG Y + V + +Y +PE+L
Sbjct: 117 HKNDIVHRDIKPENLLISHND---VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELL 173
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------------ 310
+ YGK +D+WS G IL L G P F E+E I K
Sbjct: 174 LGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233
Query: 311 -GGVDFES--EPWLL-------ISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
G+ F + P L +S DL++ +L +P R + + L HP
Sbjct: 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 78/270 (28%), Positives = 133/270 (49%), Gaps = 23/270 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG C +TG YACK + K++L ++ E E +I+ + + IV
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLA 59
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCRAIVNVVHHCHFMGVM 217
A++ + + LVM + +GG+L I + E A I++ + H H ++
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGK 275
+RDLKPEN LL N DG ++ +D GL+V + +G+ + G+ ++APE+L+ Y
Sbjct: 120 YRDLKPENVLLDN-DGN--VRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+D ++ GV LY +++ PF A E K + IL V + + S ++K
Sbjct: 177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDK----FSPASKSFC 232
Query: 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356
+L +DP+KR+ + HP R+
Sbjct: 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-24
Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P ED + L + +G G +G Y +TG A K I KL +D +++EI I
Sbjct: 7 PQED----FELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEI-I 58
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
M NIV + G+Y R + + ME C GG L D G +E A + R +
Sbjct: 59 MMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQG 118
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSAYYVAP 266
+++ H G MHRD+K N LL++ +K DFG+S I R +G+ Y++AP
Sbjct: 119 LYYLHSKGKMHRDIKGANILLTDN---GHVKLADFGVSAQITATIAKRKSFIGTPYWMAP 175
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWL 321
EV + Y + D+W+ G+ L PP F + +F + + +
Sbjct: 176 EVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKM 235
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
S+S V+ L ++PKKR T+ ++L+HP+
Sbjct: 236 KWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 79/266 (29%), Positives = 129/266 (48%), Gaps = 22/266 (8%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L T +A K++ K ++ D E E +++ +
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTH 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ ++ + VME +GG+L I + G + E A I+ + H G+++R
Sbjct: 61 LFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY-----YVAPEVLR-RSY 273
DLK +N LL +KDG +K DFG+ + + + S + Y+APE+L+ + Y
Sbjct: 121 DLKLDNVLL-DKDG--HIKIADFGMC----KENMNGEGKASTFCGTPDYIAPEILKGQKY 173
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSAKDLV 331
+ +D WS GV+LY +L G PF E E +FD+IL P IS AKD +
Sbjct: 174 NESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN------DRPHFPRWISKEAKDCL 227
Query: 332 RKMLIQDPKKRITSA-EVLEHPWMRE 356
K+ +DP KR+ ++ +HP+ R
Sbjct: 228 SKLFERDPTKRLGVDGDIRQHPFFRG 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 3e-24
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 58/313 (18%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F+T+ K +G+G FG L + TG YA K++LK ++ K +K E ++ S
Sbjct: 3 FHTV-KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDS 60
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+V +++D Q ++L+ME GG+L +I ++E V + H +
Sbjct: 61 PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL 120
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGL------------------------------ 244
G +HRD+KP+N L+ D G +K +DFGL
Sbjct: 121 GFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRN 177
Query: 245 SVFIDE-------------GKVYRDI-----VGSAYYVAPEV-LRRSYGKEIDVWSAGVI 285
SV +D K R + VG+ Y+APE+ L++ YG+E D WS G I
Sbjct: 178 SVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI-- 343
++ L G PPF +E + I+ + +S A+DL+R+ LI + + R+
Sbjct: 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRR-LITNAENRLGR 296
Query: 344 -TSAEVLEHPWMR 355
+ E+ HP+ R
Sbjct: 297 GGAHEIKSHPFFR 309
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 6e-24
Identities = 85/315 (26%), Positives = 139/315 (44%), Gaps = 57/315 (18%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L + T YA K++ K+ ++ + +K E I+ + + +V
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVR 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D+ +++ VM+ GG++ +I G + E A + V H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYR--------------------- 255
D+KP+N L+ ++DG +K TDFGL + + K Y+
Sbjct: 126 DIKPDNILI-DRDG--HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 256 ------------------------DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILL 290
+VG+ Y+APEVL R+ Y + D WS GVILY +L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 291 SGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI---TSAE 347
G PPF A+T ++ P +S A DL+ K L + P+ R+ + E
Sbjct: 243 VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK-LCRGPEDRLGKNGADE 301
Query: 348 VLEHPWMREGGEASD 362
+ HP+ + +SD
Sbjct: 302 IKAHPFFKTIDFSSD 316
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 8e-24
Identities = 96/345 (27%), Positives = 146/345 (42%), Gaps = 70/345 (20%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG +GI + T A K I N+ D + REI++++HL +N++
Sbjct: 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIAN-AFDNRIDAKRTLREIKLLRHLD-HENVIA 68
Query: 160 F--------RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
R A+ D V++V EL +L I + ++ ++ + +
Sbjct: 69 IKDIMPPPHREAFND---VYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYI 124
Query: 212 HFMGVMHRDLKPENFLL-SNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL 269
H V+HRDLKP N LL +N D LK DFGL+ ++G + V + +Y APE+L
Sbjct: 125 HSANVLHRDLKPSNLLLNANCD----LKICDFGLARTTSEKGDFMTEYVVTRWYRAPELL 180
Query: 270 RRS--YGKEIDVWSAGVILYILLSGVPPF----WAETEKGIFDAILKGGVDFESEPWLLI 323
Y IDVWS G I LL P F + K I + + G E + +
Sbjct: 181 LNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELL---GSPSEEDLGFIR 237
Query: 324 SDSAK--------------------------DLVRKMLIQDPKKRITSAEVLEHPWMREG 357
++ A+ DL+ KML+ DP KRIT E L HP++
Sbjct: 238 NEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297
Query: 358 GEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGL 402
+ SD+P+ S +AL+EE+IK L
Sbjct: 298 HDPSDEPVCQTPFS---------------FDFEEDALTEEDIKEL 327
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 9e-24
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 24/269 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG G G C +TG +A K+I N ++ I RE++I + IV++
Sbjct: 9 LGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCK-SPYIVKYY 65
Query: 162 GAYEDRQS--VHLVMELCSGGEL---FDKIIAQGHYT-EKAAAALCRAIVNVVHHCHFMG 215
GA+ D S + + ME C GG L + K+ +G EK + +++ + + H
Sbjct: 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
++HRD+KP N LL+ K +K DFG+S ++ + G+++Y+APE ++ + Y
Sbjct: 126 IIHRDIKPSNILLTRK---GQVKLCDFGVSGELVN--SLAGTFTGTSFYMAPERIQGKPY 180
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKG-----IFDAILKGGV-DFESEPWLLI--SD 325
DVWS G+ L + PF E E + I+ + + EP I S+
Sbjct: 181 SITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSE 240
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
KD +++ L +DP +R T ++LEHPW+
Sbjct: 241 EFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 16/262 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN-IVEF 160
LG+G FG L T YA K + K ++ D E E +++ LSG+ + +
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLA-LSGKPPFLTQL 66
Query: 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220
++ ++ VME +GG+L +I G + E A I + H G+++RD
Sbjct: 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRD 126
Query: 221 LKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEID 278
LK +N +L D +K DFG+ + +G + G+ Y+APE++ + YGK +D
Sbjct: 127 LKLDNVML---DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVD 183
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV+LY +L+G PF E E +F +I++ V + +S A + + ++ +
Sbjct: 184 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTKH 239
Query: 339 PKKRITSA-----EVLEHPWMR 355
P KR+ ++ EH + R
Sbjct: 240 PGKRLGCGPEGERDIKEHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-23
Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 16/264 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + K++G+GQF + Y G A K + ++++ + R+D +EI +++ L
Sbjct: 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HP 62
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKII----AQGH-YTEKAAAALCRAIVNVVHH 210
N++++ ++ + +++V+EL G+L ++I Q E+ + + + H
Sbjct: 63 NVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL 269
H +MHRD+KP N ++ ++K D GL F + +VG+ YY++PE +
Sbjct: 122 MHSKRIMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 178
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEK--GIFDAILKGGVDFESEPWLLISDS 326
+ Y + D+WS G +LY + + PF+ + + I K D+ P S+
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC--DYPPLPADHYSEE 236
Query: 327 AKDLVRKMLIQDPKKRITSAEVLE 350
+DLV + + DP+KR + VL+
Sbjct: 237 LRDLVSRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 100 KELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
K+LG G FG LC ++TG A KS L Q R D +REI+I++ L +
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKS-LNHSGEE-QHRSDFEREIEILRTLD-HE 66
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR---AIVNVVHH 210
NIV+++G E +S+ L+ME G L + Q H + L I + +
Sbjct: 67 NIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRDQINLKRLLLFSSQICKGMDY 124
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY------RDIVGSAYYV 264
+HRDL N L+ ++D ++K +DFGL+ + E K Y + ++
Sbjct: 125 LGSQRYIHRDLAARNILVESED---LVKISDFGLAKVLPEDKDYYYVKEPGES--PIFWY 179
Query: 265 APEVLR-RSYGKEIDVWSAGVILYILLS 291
APE LR + DVWS GV LY L +
Sbjct: 180 APECLRTSKFSSASDVWSFGVTLYELFT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 2e-23
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + + +G G FG L ++ YA K I R + ED ++E ++ +
Sbjct: 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI--RLPKSSSAVEDSRKEAVLLAKMK-HP 58
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHF 213
NIV F+ ++E +++VME C GG+L KI Q + E + V H H
Sbjct: 59 NIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE 118
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSAYYVAPEVLRR- 271
V+HRD+K +N L+ +K DFG + + Y VG+ YYV PE+
Sbjct: 119 KRVLHRDIKSKNIFLTQN---GKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENM 175
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + D+WS G ILY L + PF A + K + + +G + S + L+
Sbjct: 176 PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHY---SYELRSLI 232
Query: 332 RKMLIQDPKKRITSAEVL 349
++M ++P+ R ++ +L
Sbjct: 233 KQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 14/262 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG +L T +A K++ K ++ D E E +++ +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ ++++ VME +GG+L I + + A I+ + H G+++R
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL--SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
DLK +N LL + DG +K DFG+ + + K G+ Y+APE+L + Y
Sbjct: 121 DLKLDNILL-DTDG--HIKIADFGMCKENMLGDAKT-CTFCGTPDYIAPEILLGQKYNTS 176
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP-WLLISDSAKDLVRKML 335
+D WS GV+LY +L G PF E+ +F +I +D P WL + AKD++ K+
Sbjct: 177 VDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR---MDNPCYPRWL--TREAKDILVKLF 231
Query: 336 IQDPKKRI-TSAEVLEHPWMRE 356
+++P++R+ ++ +HP+ RE
Sbjct: 232 VREPERRLGVKGDIRQHPFFRE 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 2e-23
Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
L+E++ K ++ F DTD SGTI +ELK + LG + + E+KQ++ D DG+G
Sbjct: 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGK 69
Query: 453 IDYIEFIS-ATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
ID+ EF+ T + E + KAF+ FD D +G I+ L+ K+ G I DE +
Sbjct: 70 IDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDE-EL 128
Query: 510 KEIISEVDTDNDGRINYEEFCTMMR 534
+E+I E D + DG I+ EEF +M+
Sbjct: 129 QEMIDEADRNGDGEISEEEFYRIMK 153
|
Length = 158 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 102 bits (254), Expect = 2e-23
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 55/314 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L + T YA K++ K+ ++N+ +K E I+ + + +V+
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D+ +++ VM+ GG++ +I + E A + + H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHR 125
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL---------SVFIDEGKVYR--------------- 255
D+KP+N L+ D +K TDFGL S + +G R
Sbjct: 126 DIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182
Query: 256 ------------------------DIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILL 290
+VG+ Y+APEVL R+ Y + D WS GVIL+ +L
Sbjct: 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML 242
Query: 291 SGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI--QDPKKRITSAEV 348
G PPF A T ++ P + +S A DL+ K+ ++ R + ++
Sbjct: 243 VGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI 302
Query: 349 LEHPWMREGGEASD 362
HP+ E +SD
Sbjct: 303 KAHPFFSEVDFSSD 316
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 98.8 bits (247), Expect = 3e-23
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 34/273 (12%)
Query: 100 KELGRGQFGITYLCT---ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
K+LG G FG Y ++ A K++ + ++++R+D +E ++M+ L G N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA--SEEERKDFLKEARVMKKL-GHPN 57
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY---------TEKAAAALCRAIVNV 207
+V G + + ++LV+E GG+L D + + K + I
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV--- 264
+ + +HRDL N L+ +K +DFGLS + + YR G +
Sbjct: 118 MEYLASKKFVHRDLAARNCLVGEDLV---VKISDFGLSRDVYDDDYYRKKTGGKLPIRWM 174
Query: 265 APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
APE L+ + + DVWS GV+L+ + + G P+ + + + + + KG L
Sbjct: 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR-------LP 227
Query: 323 ISDSAKDLVRKMLIQ----DPKKRITSAEVLEH 351
+ D + ++++ DP+ R T +E++E
Sbjct: 228 KPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 98.8 bits (246), Expect = 3e-23
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 21/272 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSIL---KRKLVNKQDREDIKREIQIMQHLS 152
+T G+ LG+G +G Y C + G A K + L +++ E ++ E+ +++ L
Sbjct: 2 WTKGEVLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK 60
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
NIV++ G D ++ + ME GG + + G E + I++ V + H
Sbjct: 61 -HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFG-------LSVFIDEGKVYRDIVGSAYYVA 265
V+HRD+K N +L ++K DFG + + + + + G+ Y++A
Sbjct: 120 NNCVVHRDIKGNNVMLMPN---GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA 176
Query: 266 PEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--L 322
PEV+ S YG++ D+WS G ++ + +G PP A ++ A+ G P L
Sbjct: 177 PEVINESGYGRKSDIWSIGCTVFEMATGKPP-LASMDR--LAAMFYIGAHRGLMPRLPDS 233
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
S +A D V L +D +R ++ ++L H ++
Sbjct: 234 FSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 4e-23
Identities = 86/293 (29%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQNI 157
+G G +G Y + +TG A K K + D E I REI ++Q LS I
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALK-----KTRLEMDEEGIPPTALREISLLQMLSESIYI 63
Query: 158 V-----EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-----YTEKAAAALCRAIVNV 207
V E + S++LV E +L + + G K + ++
Sbjct: 64 VRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG 122
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAP 266
V HCH GVMHRDLKP+N L+ +K G +LK D GL F K Y + + +Y AP
Sbjct: 123 VAHCHKHGVMHRDLKPQNLLV-DKQKG-LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAP 180
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GGVDFESEPWLL 322
EVL Y +D+WS G I + P F ++E I K G + P +
Sbjct: 181 EVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240
Query: 323 ----------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
+S DL++KML DP KRI++ L HP+
Sbjct: 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 5e-23
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 59/306 (19%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHL-- 151
+ + ++G G +G Y + TG A K K +L N+++ I REI+I++ L
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALK---KVRLDNEKEGFPITAIREIKILRQLNH 65
Query: 152 ----------SGQQNIVEFRGAYEDRQSVHLVMELCSG---GELFDKIIAQGHYTEKAAA 198
+ +Q+ ++F+ +D+ + +LV E G L ++ H++E
Sbjct: 66 RNIVNLKEIVTDKQDALDFK---KDKGAFYLVFEYMDHDLMGLLESGLV---HFSEDHIK 119
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRD 256
+ + ++ +++CH +HRD+K N LL+NK +K DFGL+ +E + Y +
Sbjct: 120 SFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK---GQIKLADFGLARLYNSEESRPYTN 176
Query: 257 IVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GG 312
V + +Y PE+L YG IDVWS G IL L + P F A E + I + G
Sbjct: 177 KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236
Query: 313 VD------------FES------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEV 348
F + E + I A DL+ ML DP KR T+ E
Sbjct: 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEA 296
Query: 349 LEHPWM 354
L PW+
Sbjct: 297 LNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 7e-23
Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG + +TG YA K + K +++ + + + E ++ + ++ I
Sbjct: 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITN 65
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
A++D +++LVM+ GG+L + + E A +V + H +G +H
Sbjct: 66 LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI-VGSAYYVAPEVLRR----- 271
RD+KP+N LL D ++ DFG + + G V ++ VG+ Y++PE+L+
Sbjct: 126 RDIKPDNVLL---DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGK 182
Query: 272 -SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDSAK 328
YG E D WS GV +Y +L G PF+AE+ + I+ K F + +S+ AK
Sbjct: 183 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV-TDVSEEAK 241
Query: 329 DLVRKMLIQDPKKRITS---AEVLEHPW 353
DL+R+ LI P+ R+ + +HP+
Sbjct: 242 DLIRR-LICSPETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 9e-23
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 15/271 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSI-LKRKLVNKQDR--EDIKREIQIMQHLS 152
+ G++LG G F Y + TG A K + R ++Q+ E +++EI++M L+
Sbjct: 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN 61
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+I+ GA + +L +E +GG + + G + E ++ + + H
Sbjct: 62 -HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-----GKVYRDIVGSAYYVAPE 267
++HRD+K N L+ + G L+ DFG + + G+ ++G+ ++APE
Sbjct: 121 ENQIIHRDVKGANLLIDST--GQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE 178
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GGVDFESEPWLLIS 324
VLR YG+ DVWS G ++ + + PP+ AE I K S P L S
Sbjct: 179 VLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHL-S 237
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+D+ + L P+ R S E+L+HP R
Sbjct: 238 PGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 2e-22
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 25/276 (9%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE---DIKREIQ 146
+D + +T +E+G G FG Y + T A K K KQ E DI +E++
Sbjct: 11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIK---KMSYSGKQSNEKWQDIIKEVR 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELC--SGGELFDKIIAQGHYTEKAAAALCRAI 204
+Q L N +E++G Y + LVME C S ++ + + + E AA+C
Sbjct: 68 FLQQLR-HPNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGA 124
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ + + H +HRD+K N LL+ +K DFG + + + VG+ Y++
Sbjct: 125 LQGLAYLHSHERIHRDIKAGNILLTEP---GTVKLADFGSASLVSPANSF---VGTPYWM 178
Query: 265 APEVL----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEP 319
APEV+ Y ++DVWS G+ L PP F ++ S
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSND 238
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
W SD ++ V L + P+ R +S E+L+H ++
Sbjct: 239 W---SDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 96.7 bits (240), Expect = 2e-22
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
L D + L + +G G +G Y TG A K + V + E+IK+EI ++
Sbjct: 1 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINML 56
Query: 149 QHLSGQQNIVEFRGAYEDRQ------SVHLVMELCSGGELFDKIIAQGHYT--EKAAAAL 200
+ S +NI + GA+ + + LVME C G + D I T E+ A +
Sbjct: 57 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 116
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVG 259
CR I+ + H H V+HRD+K +N LL+ A +K DFG+S +D R+ +G
Sbjct: 117 CREILRGLSHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIG 173
Query: 260 SAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFW-AETEKGIFDAILKGG 312
+ Y++APEV+ +Y + D+WS G+ + G PP + +F
Sbjct: 174 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA 233
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+S+ W S + + L+++ +R T+ ++++HP++
Sbjct: 234 PRLKSKKW---SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 97.0 bits (241), Expect = 3e-22
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + + + ELG G FG Y TG A K I + ++++ ED EI+I+
Sbjct: 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILAT 65
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVV 208
+ IV+ GA+ + +++E C GG + D I+ + TE +CR ++ +
Sbjct: 66 CN-HPYIVKLLGAFYWDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVICRQMLEAL 123
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+ H M ++HRDLK N LL+ DG +K DFG+S + RD +G+ Y++APE
Sbjct: 124 QYLHSMKIIHRDLKAGNVLLT-LDGD--IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPE 180
Query: 268 VLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
V+ Y + D+WS G+ L + PP + I K SEP
Sbjct: 181 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SEPPT 234
Query: 322 LISDSA-----KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
L S +D ++ L + P+ R ++A++LEHP++ S++P+
Sbjct: 235 LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS--VTSNRPL 281
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 4e-22
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILK--RKLVNKQDREDIKREIQIMQHLSGQ 154
LGK+LG G FG Y T G K +K ++ ++++RE+ E IM+ LS
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS-H 60
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHF 213
NIV G + +++V E GG+L D + G T K + I + +
Sbjct: 61 PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLES 120
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV--------- 264
+HRDL N L++ ++K +DFGLS RDI YY
Sbjct: 121 KNFVHRDLAARNCLVTENL---VVKISDFGLS---------RDIYEDDYYRKRGGGKLPI 168
Query: 265 ---APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFW 297
APE L+ + + DVWS GV+L+ + + G P+
Sbjct: 169 KWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYP 206
|
Length = 258 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 95.4 bits (237), Expect = 5e-22
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K++G G FG YL S K I K+ K+ +E K+E+ ++ +
Sbjct: 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKE-KEASKKEVILLAKMK-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHF 213
NIV F ++++ + +VME C GG+L +I Q ++E + I + H H
Sbjct: 60 NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD 119
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR-R 271
++HRD+K +N LS G + K DFG++ D ++ VG+ YY++PE+ + R
Sbjct: 120 RKILHRDIKSQNIFLSKN--GMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNR 177
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + D+WS G +LY L + PF + I +G S + S + L+
Sbjct: 178 PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNF---SRDLRSLI 234
Query: 332 RKMLIQDPKKRITSAEVLEHPWM 354
++ P+ R + +L+ P++
Sbjct: 235 SQLFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 5e-22
Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 59/312 (18%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQI 147
+++ ++ L K +G+G FG + T A K +L + N+++ I REI+I
Sbjct: 9 DEVSKYEKLAK-IGQGTFGEVFKARHKKTKQIVALKKVL---MENEKEGFPITALREIKI 64
Query: 148 MQHLSGQQNIVEF--------RGAYEDRQSVHLVMELCS---GGELFDKIIAQGHYTEKA 196
+Q L +N+V + S +LV E C G L +K + +T
Sbjct: 65 LQLLK-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNV---KFTLSE 120
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VF----IDEG 251
+ + ++N +++ H ++HRD+K N L++ KDG +LK DFGL+ F +
Sbjct: 121 IKKVMKMLLNGLYYIHRNKILHRDMKAANILIT-KDG--ILKLADFGLARAFSLSKNSKP 177
Query: 252 KVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+ I
Sbjct: 178 NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237
Query: 309 -LKGGVDFESEP-------------------------WLLISD-SAKDLVRKMLIQDPKK 341
L G + E P + D A DL+ K+L+ DP K
Sbjct: 238 QLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAK 297
Query: 342 RITSAEVLEHPW 353
RI + L H +
Sbjct: 298 RIDADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 7e-22
Identities = 92/326 (28%), Positives = 136/326 (41%), Gaps = 68/326 (20%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI--------LKRKLVNKQDREDI 141
D+ Y +G G +G+ T TG A K I +R L
Sbjct: 1 FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL--------- 51
Query: 142 KREIQIMQHLSGQQNIVEFR-----GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
REI+I++ +NI+ ++E V++V EL +L+ K+I H +
Sbjct: 52 -REIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMET-DLY-KLIKTQHLSNDH 107
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLL-SNKDGGAMLKATDFGLSVFIDEGKVYR 255
I+ + + H V+HRDLKP N LL +N D LK DFGL+ D +
Sbjct: 108 IQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD----LKICDFGLARIADPEHDHT 163
Query: 256 ----DIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL 309
+ V + +Y APE++ + Y K ID+WS G IL +LS P F + + IL
Sbjct: 164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL 223
Query: 310 KGGV-------DFES------------------EPWLLI----SDSAKDLVRKMLIQDPK 340
GV D PW + A DL+ KML +P
Sbjct: 224 --GVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPH 281
Query: 341 KRITSAEVLEHPWMREGGEASDKPIG 366
KRIT E L HP++ + + SD+P+
Sbjct: 282 KRITVEEALAHPYLEQYHDPSDEPVA 307
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 9e-22
Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 32/281 (11%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D+ LG E+G G G Y TG+ A K + R+ NK++ + I ++ ++
Sbjct: 13 DLNDLENLG-EIGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKEENKRILMDLDVVLK 69
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII--AQGHYTEKAAAALCRAIVNVV 208
IV+ G + V + MEL S DK++ QG E + AIV +
Sbjct: 70 SHDCPYIVKCYGYFITDSDVFICMELMS--TCLDKLLKRIQGPIPEDILGKMTVAIVKAL 127
Query: 209 HHC---HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
H+ H GV+HRD+KP N LL D +K DFG+S + + K G A Y+A
Sbjct: 128 HYLKEKH--GVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMA 182
Query: 266 PEVL-----RRSYGKEIDVWSAGVILYILLSGVPPF-WAETEKGIFDAILKGGVDFESEP 319
PE + Y DVWS G+ L L +G P+ +TE + IL + EP
Sbjct: 183 PERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL------QEEP 236
Query: 320 WLL-----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
L S V L +D +KR E+L+HP++R
Sbjct: 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 9e-22
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 28/283 (9%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
L D + L + +G G +G Y TG A K + V + + E+IK EI ++
Sbjct: 11 LRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINML 66
Query: 149 QHLSGQQNIVEFRGAY-------EDRQSVHLVMELCSGGELFD--KIIAQGHYTEKAAAA 199
+ S +NI + GA+ D Q + LVME C G + D K E A
Sbjct: 67 KKYSHHRNIATYYGAFIKKSPPGHDDQ-LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY 125
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IV 258
+CR I+ + H H V+HRD+K +N LL+ A +K DFG+S +D R+ +
Sbjct: 126 ICREILRGLAHLHAHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFI 182
Query: 259 GSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFW-AETEKGIFDAILKG 311
G+ Y++APEV+ +Y D+WS G+ + G PP + +F
Sbjct: 183 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 242
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+S+ W S D + L+++ R ++ ++L+HP++
Sbjct: 243 PPKLKSKKW---SKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 1e-21
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 25/271 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
+ Y L + +G G +G Y TG A K I KL D I++EI +++
Sbjct: 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEIFMVKECK 64
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
NIV + G+Y R+ + + ME C GG L D G +E A +CR + + + H
Sbjct: 65 -HCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLH 123
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSAYYVAPEVL-- 269
G MHRD+K N LL+ D G +K DFG++ I R +G+ Y++APEV
Sbjct: 124 SKGKMHRDIKGANILLT--DNGD-VKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAV 180
Query: 270 --RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDF------ESEPW 320
Y + D+W+ G+ L PP F + +F L +F + W
Sbjct: 181 EKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQPPKLKDKTKW 237
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
S + + V+ L ++PKKR T+ +L H
Sbjct: 238 ---SSTFHNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 1e-21
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 31/309 (10%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+D + + E+G G FG Y T + T A K + + +DI +E++ +Q
Sbjct: 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQ 76
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L N +E++G Y + LVME C G + + E AA+ + +
Sbjct: 77 QLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 135
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRD+K N LL+ +K DFG + + VG+ Y++APEV+
Sbjct: 136 YLHSHNMIHRDIKAGNILLTEP---GQVKLADFGSASKSSPANSF---VGTPYWMAPEVI 189
Query: 270 ----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLLIS 324
Y ++DVWS G+ L PP F ++ +S W +
Sbjct: 190 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---T 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAV--LSRMK-------- 374
DS + V L + P++R SAE+L H ++R D+P + + R K
Sbjct: 247 DSFRGFVDYCLQKIPQERPASAELLRHDFVRR-----DRPARVLIDLIQRTKDAVRELDN 301
Query: 375 -QFRAMNKL 382
Q+R M K+
Sbjct: 302 LQYRKMKKI 310
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 95.0 bits (236), Expect = 2e-21
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 14/261 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L G +A K++ K ++ D E E +++ +
Sbjct: 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ ++ + VME +GG+L I +G + A IV + H G+++R
Sbjct: 61 LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120
Query: 220 DLKPENFLLSNKDGGAMLKATDFGL---SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGK 275
DLK +N +L D +K DFG+ +VF D G+ Y+APE+L+ Y
Sbjct: 121 DLKLDNVML---DRDGHIKIADFGMCKENVFGDNRA--STFCGTPDYIAPEILQGLKYTF 175
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+D WS GV+LY +L G PF + E +F++I VD P + +S KD++ K+
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR---VDTPHYPRWITKES-KDILEKLF 231
Query: 336 IQDPKKRI-TSAEVLEHPWMR 355
+DP +R+ + HP+ +
Sbjct: 232 ERDPTRRLGVVGNIRGHPFFK 252
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 2e-21
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 19/261 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSY-ACKSILKRKLVNKQDR-------EDIKREIQI 147
Y + + LG G FG Y + + G + A K I +D+ DI E+ I
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRA 203
++ NIV + + + +++VM+L G L + + + +TE+ +
Sbjct: 62 IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121
Query: 204 IVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY 262
+V + + H ++HRDL P N +L D + TDFGL+ +VG+
Sbjct: 122 MVLALRYLHKEKRIVHRDLTPNNIMLGEDD---KVTITDFGLAKQKQPESKLTSVVGTIL 178
Query: 263 YVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
Y PE+++ YG++ DVW+ G ILY + + PPF++ + I++ +E P
Sbjct: 179 YSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEA--VYEPLPEG 236
Query: 322 LISDSAKDLVRKMLIQDPKKR 342
+ S+ D++ L D + R
Sbjct: 237 MYSEDVTDVITSCLTPDAEAR 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 2e-21
Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 36/276 (13%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G+G +G Y T G+ A K + V+ E+I+ E I+Q L N+V+F
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD----EEIEAEYNILQSLPNHPNVVKFY 85
Query: 162 GA-YEDRQSVH----LVMELCSGG---ELFDKIIAQGHYTEKAAAA--LCRAIVNVVHHC 211
G Y+ + V LV+ELC+GG EL ++ G ++A + L A++ + H
Sbjct: 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG-LQHL 144
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-VGSAYYVAPEVLR 270
H ++HRD+K N LL+ + G +K DFG+S + ++ R+ VG+ +++APEV+
Sbjct: 145 HNNRIIHRDVKGNNILLTTEGG---VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA 201
Query: 271 ------RSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLLI 323
SY DVWS G+ L G PP F K +F + P LL
Sbjct: 202 CEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK------IPRNPPPTLLH 255
Query: 324 SD----SAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ S + + LI+D + R + +LEHP+++
Sbjct: 256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 93.6 bits (232), Expect = 3e-21
Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR-EDIKREIQIMQ 149
D + +T + +G+G FG Y +N T A K I L +D EDI++EI ++
Sbjct: 1 DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKII---DLEEAEDEIEDIQQEITVLS 57
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
I + G+Y + ++ME GG D ++ G E A + R I+ +
Sbjct: 58 QCDSPY-ITRYYGSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLD 115
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEV 268
+ H +HRD+K N LLS + +K DFG++ + + ++ R+ VG+ +++APEV
Sbjct: 116 YLHSERKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 172
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISD 325
+++S Y + D+WS G+ L G PP + I K S P L S
Sbjct: 173 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK-----NSPPTLEGQYSK 227
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
K+ V L +DP+ R T+ E+L+H ++
Sbjct: 228 PFKEFVEACLNKDPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 3e-21
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV---NKQDREDIKREIQIMQHLS 152
Y L + LG+G FG YL + K +LK V N + +E Q++ L
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLK-VLKEIPVGELNPNETVQANQEAQLLSKLD 60
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA-----LCRAIVNV 207
IV+F ++ +R + ++ E C G +L K+ H + + + ++ V
Sbjct: 61 -HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGV 119
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYVAP 266
H+ H ++HRDLK +N L N +LK DFG+S + + G+ YY++P
Sbjct: 120 -HYMHQRRILHRDLKAKNIFLKNN----LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSP 174
Query: 267 EVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
E L+ + Y + D+WS G ILY + F + + I++G E + S
Sbjct: 175 EALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETY---SR 231
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+++ ML +DP R ++AE+L +P++
Sbjct: 232 QLNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 4e-21
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKR---KLVNKQDREDIKREIQIMQHLSG 153
LG +G G +G+ C TG A K L+ K+V K REI++++ L
Sbjct: 5 NLGL-VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKI----AMREIRMLKQLR- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+N+V + ++ ++LV E L D E I+ + CH
Sbjct: 59 HENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHS 118
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSAYYVAPEVL--R 270
++HRD+KPEN L+S ++K DFG + + G+VY D V + +Y APE+L
Sbjct: 119 HNIIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD 175
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETE------------------KGIFD-----A 307
YG+ +D+W+ G ++ +L+G P F +++ + IF A
Sbjct: 176 TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235
Query: 308 ILKGGVDFESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
++ E EP + +S DL ++ L DP R +S+++L H +
Sbjct: 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 5e-21
Identities = 93/320 (29%), Positives = 138/320 (43%), Gaps = 79/320 (24%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
I + Y + ++LG+G +GI + + T A K I N D + REI +Q L
Sbjct: 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFD-AFRNATDAQRTFREIMFLQEL 63
Query: 152 SGQQNIVEFRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA-IVNVV 208
NIV+ E+ + ++LV E Y E A+ RA I+ V
Sbjct: 64 GDHPNIVKLLNVIKAENDKDIYLVFE----------------YMETDLHAVIRANILEDV 107
Query: 209 HHCHFM-------------GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR 255
H + M V+HRDLKP N LL++ +K DFGL+ + E +
Sbjct: 108 HKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD---CRVKLADFGLARSLSELEENP 164
Query: 256 ------DIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAET-----EK 302
D V + +Y APE+L Y K +D+WS G IL +L G P F + EK
Sbjct: 165 ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK 224
Query: 303 GIFDAILKGGV----DFES----EPWLLI------------------SDSAKDLVRKMLI 336
I + I G D ES ++ SD A DL++K+L+
Sbjct: 225 -IIEVI---GPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLV 280
Query: 337 QDPKKRITSAEVLEHPWMRE 356
+P KR+T+ E LEHP++ +
Sbjct: 281 FNPNKRLTAEEALEHPYVAQ 300
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 8e-21
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 34/294 (11%)
Query: 82 ETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI 141
+T++ D + + + +G+G +G + G+ A K IL ++ D E+I
Sbjct: 6 KTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVK-ILDP--IHDID-EEI 61
Query: 142 KREIQIMQHLSGQQNIVEFRGAYEDRQSVH-----LVMELCSGGELFDKI---IAQGHYT 193
+ E I++ LS N+V+F G Y + + LV+ELC+GG + D + + +G
Sbjct: 62 EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERM 121
Query: 194 EKAAAA--LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
E+ A L A++ + H H +HRD+K N LL+ + G +K DFG+S +
Sbjct: 122 EEPIIAYILHEALMGL-QHLHVNKTIHRDVKGNNILLTTEGG---VKLVDFGVSAQLTST 177
Query: 252 KVYRDI-VGSAYYVAPEV------LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGI 304
++ R+ VG+ +++APEV L +Y DVWS G+ L G PP +
Sbjct: 178 RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL---ADLHP 234
Query: 305 FDAILKGGVDFESEPWL----LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
A+ K + P L L S+ D +RK L +D +KR T +++L+H ++
Sbjct: 235 MRALFK--IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 93.2 bits (231), Expect = 8e-21
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 30/274 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI---KREIQIMQHLSGQQNIV 158
+GRG + L T YA K ++K++LVN D EDI + E + + S +V
Sbjct: 3 IGRGSYAKVLLVRLKKTERIYAMK-VVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLV 59
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
++ + V+E +GG+L + Q E+ A I +++ H G+++
Sbjct: 60 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 119
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
RDLK +N LL D +K TD+G+ + G G+ Y+APE+LR YG
Sbjct: 120 RDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176
Query: 277 IDVWSAGVILYILLSGVPPF---------WAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+D W+ GV+++ +++G PF TE +F IL+ + +S A
Sbjct: 177 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKA 232
Query: 328 KDLVRKMLIQDPKKRITS------AEVLEHPWMR 355
+++ L +DPK+R+ A++ HP+ R
Sbjct: 233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 1e-20
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-QNIV 158
K +GRG FG + T YA K + K +++ + + + E ++ ++G Q I
Sbjct: 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL--VNGDCQWIT 64
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A++D ++LVM+ GG+L + + E A +V +H H + +
Sbjct: 65 TLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYV 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDI-VGSAYYVAPEVLRR---- 271
HRD+KP+N LL D ++ DFG + +G V + VG+ Y++PE+L+
Sbjct: 125 HRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 272 --SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL-ISDSAK 328
YG E D WS GV +Y +L G PF+AE+ + I+ F+ + +S+ AK
Sbjct: 182 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAK 241
Query: 329 DLVRKML 335
DL+++++
Sbjct: 242 DLIQRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 96.0 bits (238), Expect = 1e-20
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 49/318 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K++G G+FG +L T + K+I R L ++++ + E+ +M+ L +
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HK 72
Query: 156 NIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVH 209
NIV + + ++ Q ++++ME C G+L I G E A + R +++ +
Sbjct: 73 NIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALA 132
Query: 210 HCHFMG-------VMHRDLKPENFLLS--------------NKDGGAMLKATDFGLSVFI 248
+CH + V+HRDLKP+N LS N +G + K DFGLS I
Sbjct: 133 YCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNI 192
Query: 249 DEGKVYRDIVGSAYYVAPEVL---RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305
+ VG+ YY +PE+L +SY + D+W+ G I+Y L SG PF
Sbjct: 193 GIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQL 252
Query: 306 DAILKGGVDFESEPWLLISDSAKD---LVRKMLIQDPKKRITSAEVLEH--------PWM 354
+ LK G P L I +K+ L++ +L K+R ++ + L + P
Sbjct: 253 ISELKRG------PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPPVG 306
Query: 355 REGGEASDKPIGSAVLSR 372
GG A AV++R
Sbjct: 307 AAGGGAGVAAAPGAVVAR 324
|
Length = 1021 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 2e-20
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHL 151
YT +++G G +G+ Y TG A K I +L + + E + REI +++ L
Sbjct: 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKI---RLES--EEEGVPSTAIREISLLKEL 56
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
NIV + ++L+ E S + D + + + + I+ +
Sbjct: 57 Q-HPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGIL 115
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEV 268
CH V+HRDLKP+N L+ NK ++K DFGL+ F +VY V + +Y APEV
Sbjct: 116 FCHSRRVLHRDLKPQNLLIDNK---GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEV 172
Query: 269 LRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI------LKGGV--- 313
L S Y +D+WS G I + + P F ++E IF + + GV
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232
Query: 314 -DFES------EPWLL-----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
D+++ + L + + DL+ KMLI DP KRI++ + L HP+
Sbjct: 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 2e-20
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSG 153
L K +G G +G+ + C TG A K K V +D IK REI++++ L
Sbjct: 6 LSK-IGEGSYGVVFKCRNRETGQIVAIK-----KFVESEDDPVIKKIALREIRMLKQLK- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCH 212
N+V + ++ +HLV E C + +++ E + + V+ CH
Sbjct: 59 HPNLVNLIEVFRRKRKLHLVFEYCDH-TVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCH 117
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-- 269
+HRD+KPEN L+ K G +K DFG + + G Y D V + +Y APE+L
Sbjct: 118 KHNCIHRDVKPENILI-TKQG--QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVG 174
Query: 270 RRSYGKEIDVWSAGVILYILLSGVPPFWAETE------------------KGIF--DAIL 309
YG +DVW+ G + LL+G P + +++ + IF +
Sbjct: 175 DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234
Query: 310 KG---GVDFESEPWLL----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
KG EP IS A ++ L DP +R++ E+LEHP+
Sbjct: 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-20
Identities = 85/320 (26%), Positives = 142/320 (44%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ Y +G G +G + TG A K L R + + RE
Sbjct: 6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKK-LSRPFQSAIHAKRTYRE 64
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + ED Q V+LV L G +L + I+ ++
Sbjct: 65 LRLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NNIVKCQKLSDDHIQ 121
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H G++HRDLKP N + N+D LK DFGL+ D+ V
Sbjct: 122 FLVYQILRGLKYIHSAGIIHRDLKPSN-IAVNED--CELKILDFGLARHTDDEMT--GYV 176
Query: 259 GSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F K I + +
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPD 236
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ DP KRIT+A
Sbjct: 237 EELLQK---ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA 293
Query: 347 EVLEHPWMREGGEASDKPIG 366
E L HP++ E + D+P+
Sbjct: 294 EALAHPYLAEYHDPEDEPVA 313
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 91.7 bits (227), Expect = 2e-20
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
ED + +T +E+G G FG Y + T A K + + + +DI +E++ +Q
Sbjct: 21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQ 80
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ N +E++G Y + LVME C G + + E AA+ + +
Sbjct: 81 RIK-HPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 139
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRD+K N LL+ +K DFG + + VG+ Y++APEV+
Sbjct: 140 YLHSHNMIHRDIKAGNILLTEP---GQVKLADFGSASIASPANSF---VGTPYWMAPEVI 193
Query: 270 ----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLLIS 324
Y ++DVWS G+ L PP F ++ +S W S
Sbjct: 194 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---S 250
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351
D ++ V L + P+ R TS E+L+H
Sbjct: 251 DYFRNFVDSCLQKIPQDRPTSEELLKH 277
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 3e-20
Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 22/268 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN---IV 158
+GRG FG Y C + TG YA K + K+++ KQ E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIV 60
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
A+ + +++L +GG+L + G ++E I+ + H H V++
Sbjct: 61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKE 276
RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++ +Y
Sbjct: 121 RDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSS 176
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFESEPWLLISDSAKDLVRK 333
D +S G +L+ LL G PF K I L V+ S + L+
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS----FSPELRSLLEG 232
Query: 334 MLIQDPKKRI-----TSAEVLEHPWMRE 356
+L +D +R+ + EV EHP+ R
Sbjct: 233 LLQRDVNRRLGCLGRGAQEVKEHPFFRS 260
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 5e-20
Identities = 73/269 (27%), Positives = 131/269 (48%), Gaps = 18/269 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR-EDIKREIQIMQ 149
D + +T + +G+G FG + +N T A K I L +D EDI++EI ++
Sbjct: 1 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII---DLEEAEDEIEDIQQEITVLS 57
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ ++ G+Y + ++ME GG D ++ G + E A + + I+ +
Sbjct: 58 QCDSPY-VTKYYGSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLD 115
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEV 268
+ H +HRD+K N LLS + +K DFG++ + + ++ R+ VG+ +++APEV
Sbjct: 116 YLHSEKKIHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 172
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISD 325
+++S Y + D+WS G+ L G PP + I K + P L S
Sbjct: 173 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK-----NNPPTLTGEFSK 227
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
K+ + L +DP R T+ E+L+H ++
Sbjct: 228 PFKEFIDACLNKDPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 6e-20
Identities = 84/333 (25%), Positives = 122/333 (36%), Gaps = 92/333 (27%)
Query: 95 FYTLGKELGRGQFGITYLC--TENSTGNSYACKSILKRKLVNKQDREDIK-------REI 145
Y + +GRG +G Y G YA K K D+E REI
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKF-------KGDKEQYTGISQSACREI 53
Query: 146 QIMQHLSGQQNIVEFRGAYEDR--QSVHLVMELCSGGELFD--KIIAQGHYTEKAAAALC 201
+++ L +N+V + + +SV+L+ + D +II + + ++
Sbjct: 54 ALLRELK-HENVVSLVEVFLEHADKSVYLLFDYAE----HDLWQIIK--FHRQAKRVSIP 106
Query: 202 RAIV--------NVVHHCHFMGVMHRDLKPENFLL-SNKDGGAMLKATDFGLS------- 245
++V N VH+ H V+HRDLKP N L+ ++K D GL+
Sbjct: 107 PSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPL 166
Query: 246 -VFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302
D V V + +Y APE+L R Y K ID+W+ G I LL+ P F K
Sbjct: 167 KPLADLDPV----VVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK 222
Query: 303 -------------GIF------------------------DAILKGGVDFES-----EPW 320
IF S E
Sbjct: 223 IKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKH 282
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
DL+RK+L DP KRIT+ E LEHP+
Sbjct: 283 KKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 7e-20
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 25/283 (8%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F+ + ELG G FG Y TG A K I + ++++ ED EI I+
Sbjct: 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCD- 60
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHC 211
NIV+ A+ ++ +++E C+GG + D ++ + TE +C+ + +++
Sbjct: 61 HPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYL 119
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR 270
H ++HRDLK N L + DG +K DFG+S RD +G+ Y++APEV+
Sbjct: 120 HENKIIHRDLKAGNILFT-LDGD--IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 176
Query: 271 ------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP--WLL 322
R Y + DVWS G+ L + PP + I K ++P W
Sbjct: 177 CETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW-- 234
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
S KD ++K L ++ R T+ ++L+HP++ S+KPI
Sbjct: 235 -SSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT---VNSNKPI 273
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 89.4 bits (221), Expect = 2e-19
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN-IV 158
K +GRG FG + + +A K + K +++ + + + E ++ ++G I
Sbjct: 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--VNGDNQWIT 64
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A++D +++LVM+ GG+L + + E A +V + H + +
Sbjct: 65 TLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDI-VGSAYYVAPEVL------ 269
HRD+KP+N L+ D ++ DFG + +++G V + VG+ Y++PE+L
Sbjct: 125 HRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 270 RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL-ISDSAK 328
+ YG E D WS GV +Y +L G PF+AE+ + I+ F+ + +S+ AK
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAK 241
Query: 329 DLVRKML 335
DL+R+++
Sbjct: 242 DLIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 88.2 bits (218), Expect = 2e-19
Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR-EDIKREIQIMQ 149
D + +T +++G+G FG + +N T A K I L +D EDI++EI ++
Sbjct: 1 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLS 57
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ ++ G+Y + ++ME GG D ++ G E A + R I+ +
Sbjct: 58 QCDSPY-VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLD 115
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEV 268
+ H +HRD+K N LLS +K DFG++ + + ++ R+ VG+ +++APEV
Sbjct: 116 YLHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 172
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISD 325
+++S Y + D+WS G+ L G PP + I K + P L S
Sbjct: 173 IKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSK 227
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
K+ V L ++P R T+ E+L+H ++
Sbjct: 228 PLKEFVEACLNKEPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 3e-19
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 26/261 (9%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + K++GRGQF Y T G A K + L++ + R D +EI +++ L+
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HP 62
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE-----------KAAAALCRAI 204
N++++ ++ + +++V+EL G+L I H+ + K LC A+
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMI---KHFKKQKRLIPEKTVWKYFVQLCSAL 119
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYY 263
H H VMHRD+KP N ++ ++K D GL F + +VG+ YY
Sbjct: 120 ----EHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 172
Query: 264 VAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-GGVDFESEPWL 321
++PE + + Y + D+WS G +LY + + PF+ + + ++ K D+ P
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIEQCDYPPLPSD 231
Query: 322 LISDSAKDLVRKMLIQDPKKR 342
S+ + LV + DP+KR
Sbjct: 232 HYSEELRQLVNMCINPDPEKR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 3e-19
Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 18/257 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + K++GRGQF Y T A K + ++++ + R+D +EI +++ L+
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HP 62
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI-------VNVV 208
N++++ ++ + +++V+EL G+L I ++ ++ R + + V
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIK---YFKKQKRLIPERTVWKYFVQLCSAV 119
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPE 267
H H VMHRD+KP N ++ ++K D GL F + +VG+ YY++PE
Sbjct: 120 EHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 176
Query: 268 VLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-GGVDFESEPWLLISD 325
+ + Y + D+WS G +LY + + PF+ + + +F K D+ P S+
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLFSLCQKIEQCDYPPLPTEHYSE 235
Query: 326 SAKDLVRKMLIQDPKKR 342
++LV + DP +R
Sbjct: 236 KLRELVSMCIYPDPDQR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 4e-19
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 50/310 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+ LG G G+ + ++ A K I+ L + Q + REI+I++ L NIV+
Sbjct: 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIV---LTDPQSVKHALREIKIIRRLD-HDNIVK 66
Query: 160 -----FRGAYEDRQSVHLVMEL---CSGGELFD----KIIAQGHYTEKAAAALCRAIVNV 207
+ + V + EL E + ++ QG +E+ A ++
Sbjct: 67 VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRG 126
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID---EGKVY-RDIVGSAYY 263
+ + H V+HRDLKP N ++ +D +LK DFGL+ +D K Y + + + +Y
Sbjct: 127 LKYIHSANVLHRDLKPANVFINTED--LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWY 184
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEP 319
+P +L +Y K ID+W+AG I +L+G P F E IL+ V E
Sbjct: 185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRN 244
Query: 320 WLL------------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
LL ++ A D + ++L +P R+T+ E L HP+M
Sbjct: 245 ELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304
Query: 356 EGGEASDKPI 365
D+P+
Sbjct: 305 CYSCPFDEPV 314
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 88.0 bits (218), Expect = 4e-19
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 30/274 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI---KREIQIMQHLSGQQNIV 158
+GRG + L T YA K ++K++LVN D EDI + E + + S +V
Sbjct: 3 IGRGSYAKVLLVELKKTRRIYAMK-VIKKELVN--DDEDIDWVQTEKHVFETASNHPFLV 59
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
++ + V+E SGG+L + Q E+ A I ++ H G+++
Sbjct: 60 GLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIY 119
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
RDLK +N LL D +K TD+G+ I G G+ Y+APE+LR YG
Sbjct: 120 RDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176
Query: 277 IDVWSAGVILYILLSGVPPF---------WAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+D W+ GV+++ +++G PF TE +F IL+ + +S A
Sbjct: 177 VDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKA 232
Query: 328 KDLVRKMLIQDPKKRITS------AEVLEHPWMR 355
+++ L +DPK+R+ ++ HP+ R
Sbjct: 233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 7e-19
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 16/251 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+GRG + L YA K + K + + +D + ++ E + + S +V
Sbjct: 3 IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ + LV+E +GG+L + Q E+ A I ++ H G+++RDL
Sbjct: 63 SCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDL 122
Query: 222 KPENFLLSNKDGGAMLKATDFGL-SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDV 279
K +N LL D +K TD+G+ + G G+ Y+APE+LR YG +D
Sbjct: 123 KLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDW 179
Query: 280 WSAGVILYILLSGVPPF-------WAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
W+ GV+++ +++G PF TE +F IL+ + +S A +++
Sbjct: 180 WALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKASHVLK 235
Query: 333 KMLIQDPKKRI 343
L +DPK+R+
Sbjct: 236 GFLNKDPKERL 246
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 85.7 bits (212), Expect = 1e-18
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 18/262 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G +GI Y + ST A K I +R + + + + EI + +L +NIV++
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYL 71
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAIVNVVHHCHFMGVMH 218
G+ + + ME GG L + ++ E+ + I+ + + H ++H
Sbjct: 72 GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSAYYVAPEVL---RRSYG 274
RD+K +N L++ G ++K +DFG S + G+ Y+APEV+ R YG
Sbjct: 132 RDIKGDNVLVNTYSG--VVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYG 189
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSAKDLVR 332
D+WS G + + +G PPF E A+ K G+ F+ P + +S AK+ +
Sbjct: 190 APADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGM-FKIHPEIPESLSAEAKNFIL 246
Query: 333 KMLIQDPKKRITSAEVLEHPWM 354
+ DP KR ++ ++L+ P++
Sbjct: 247 RCFEPDPDKRASAHDLLQDPFL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 1e-18
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN---IV 158
+GRG FG Y C + TG YA K + K+++ KQ E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIV 60
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
A+ + +++L +GG+L + G ++EK I+ + H H V++
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKE 276
RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++ +Y
Sbjct: 121 RDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAYDSS 176
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
D +S G +L+ LL G PF K + I + + E S K L+ +L
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTVNVELPDSFSPELKSLLEGLLQ 235
Query: 337 QDPKKRI-----TSAEVLEHPWMR 355
+D KR+ + EV EH + +
Sbjct: 236 RDVSKRLGCLGRGAQEVKEHVFFK 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 86.3 bits (213), Expect = 1e-18
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+D + ++ +E+G G FG Y + A K + + + +DI +E++ +Q
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELC--SGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
L N +++RG Y + LVME C S +L + + + E AA+ +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQG 127
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ + H ++HRD+K N LLS ++K DFG + + + VG+ Y++APE
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPANXF---VGTPYWMAPE 181
Query: 268 VL----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLL 322
V+ Y ++DVWS G+ L PP F ++ +S W
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW-- 239
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
S+ ++ V L + P+ R TS +L+H ++
Sbjct: 240 -SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 1e-18
Identities = 83/300 (27%), Positives = 122/300 (40%), Gaps = 57/300 (19%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIM 148
F L K LG G + Y +TG A K I D E+ REI +M
Sbjct: 1 NFKQLEK-LGEGTYATVYKGRNRTTGEIVALKEI-------HLDAEEGTPSTAIREISLM 52
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVN 206
+ L +NIV + LV E + D +G + ++
Sbjct: 53 KELK-HENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLK 111
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL--SVFIDEGKVYRDIVGSAYYV 264
+ CH V+HRDLKP+N L+ NK G LK DFGL + I ++V + +Y
Sbjct: 112 GIAFCHENRVLHRDLKPQNLLI-NKRG--ELKLADFGLARAFGIPVNTFSNEVV-TLWYR 167
Query: 265 APEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESE 318
AP+VL R+Y ID+WS G I+ +++G P F IF + G ES
Sbjct: 168 APDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM---GTPTEST 224
Query: 319 PWLLISDSAK-------------------------DLVRKMLIQDPKKRITSAEVLEHPW 353
W IS + DL+ ++L +P+ RI++ + L+HPW
Sbjct: 225 -WPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 2e-18
Identities = 78/319 (24%), Positives = 127/319 (39%), Gaps = 62/319 (19%)
Query: 90 EDIRQFYT-LGKELGRGQFGITYLCTENSTGNSYACKS--ILKRKLVNKQDREDIK---- 142
I + Y G LG G +G + TG A K I++ +DR+ +
Sbjct: 4 FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGI 63
Query: 143 -----REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG--GELFDKIIAQGHYTEK 195
RE++IM + +NI+ Y + ++LVM++ + ++ D+ I TE
Sbjct: 64 HFTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI---RLTES 119
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-------VFI 248
+ I+N ++ H MHRDL P N +++K + K DFGL+
Sbjct: 120 QVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSK---GICKIADFGLARRYGYPPYSD 176
Query: 249 DEGKV--------YRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWA 298
K V + +Y APE+L + Y +D+WS G I LL+G P F
Sbjct: 177 TLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236
Query: 299 ETEKGIFDAILKGGVDFESEPWLLI------------------------SDSAKDLVRKM 334
E E I + + W SD A DL++ +
Sbjct: 237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL 296
Query: 335 LIQDPKKRITSAEVLEHPW 353
L +P +RI++ E L+H +
Sbjct: 297 LKLNPLERISAKEALKHEY 315
|
Length = 335 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 3e-18
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+AF+ FDKD G I+ DEL+ A+K G G E I E+I EVD D DG+I++EEF +M
Sbjct: 4 EAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 3e-18
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN---KQD-REDIKREIQIMQH 150
F LG ELG G G+ +G I+ RKL++ K R I RE++++ H
Sbjct: 3 FEKLG-ELGAGNGGVVTKVLHRPSG------LIMARKLIHLEIKPAIRNQIIRELKVL-H 54
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVN-VV 208
IV F GA+ + + ME GG L D+++ + G E + A++ +
Sbjct: 55 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLRGLT 113
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPE 267
+ +MHRD+KP N L+ N G +K DFG+S ID + VG+ Y++PE
Sbjct: 114 YLREKHKIMHRDVKPSNILV-NSRGE--IKLCDFGVSGQLIDS--MANSFVGTRSYMSPE 168
Query: 268 VLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVD--------- 314
L+ + Y + D+WS G+ L + G P K +F + G
Sbjct: 169 RLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSG 228
Query: 315 -----------FE-------SEPWLL----ISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
FE P L SD +D V K L ++PK+R E+ +HP
Sbjct: 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288
Query: 353 WMR 355
+++
Sbjct: 289 FIK 291
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 3e-18
Identities = 66/199 (33%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 172 LVMELCSGGELFDKIIAQG-----HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENF 226
L+ME SGG+L +K I Q + E L IV + H +MHRDLK N
Sbjct: 142 LIMEYGSGGDL-NKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANI 200
Query: 227 LLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV---------GSAYYVAPEVL-RRSYGKE 276
L ++K DFG S K Y D V G+ YY+APE+ R+ Y K+
Sbjct: 201 FLMPT---GIIKLGDFGFS------KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKK 251
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
D+WS GVILY LL+ PF +++ I +L G D P +S K L+ +L
Sbjct: 252 ADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCP---VSSGMKALLDPLLS 308
Query: 337 QDPKKRITSAEVLEHPWMR 355
++P R T+ ++L +++
Sbjct: 309 KNPALRPTTQQLLHTEFLK 327
|
Length = 478 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 8e-18
Identities = 87/331 (26%), Positives = 137/331 (41%), Gaps = 84/331 (25%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI---------LKRKLVNKQD 137
KP+E+I G G +G+ + +G A K I KR L
Sbjct: 8 KPIENI----------GSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL----- 52
Query: 138 REDIKREIQIMQHLSGQQNIVE----FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYT 193
RE++I++H NI+ R D + V++VM+L +L I + T
Sbjct: 53 -----RELKILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDL-MESDLHHIIHSDQPLT 105
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL-----SVFI 248
E+ ++ + + H V+HRDLKP N LL N+D L+ DFG+ S
Sbjct: 106 EEHIRYFLYQLLRGLKYIHSANVIHRDLKPSN-LLVNEDC--ELRIGDFGMARGLSSSPT 162
Query: 249 DEGKVYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVI-------------------LY 287
+ + V + +Y APE+L Y ID+WS G I L
Sbjct: 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLK 222
Query: 288 ILLS--GVPPFWAETEKGIFDAILKGGV-----DFESE---PWLLI----SDSAKDLVRK 333
++LS G P + + + I V + + PW I S A DL+ +
Sbjct: 223 LILSVLGSPS------EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQ 276
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
ML DP++RIT + L+HP++ + + D+P
Sbjct: 277 MLQFDPEERITVEQALQHPFLAQYHDPDDEP 307
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 9e-18
Identities = 82/289 (28%), Positives = 124/289 (42%), Gaps = 48/289 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSIL---KRKLVNKQDREDIKREIQIMQHLSGQQN 156
+LG G G TG A K + K + R+ I RE+QIM
Sbjct: 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSV-----RKQILRELQIMHECRSPY- 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVN------VVH 209
IV F GA+ + ++ + ME G L D+I + G + + A+V VH
Sbjct: 65 IVSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH 123
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----VGSAYYVA 265
+MHRD+KP N L+ + +K DFG+S G++ I VG++ Y++
Sbjct: 124 R-----IMHRDIKPSNILV---NSRGQIKLCDFGVS-----GELINSIADTFVGTSTYMS 170
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------GIFDAILKGGVDFE 316
PE ++ Y + DVWS G+ + L G PF GI D +L+ V E
Sbjct: 171 PERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQ-E 228
Query: 317 SEPWLLISD---SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362
P L SD +D V L++DP +R T ++ P + AS+
Sbjct: 229 PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRASN 277
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 85.7 bits (212), Expect = 9e-18
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 165 EDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCRAIVNVVHHCHFMGVMHRD 220
E+ + LV++ + G+L +I ++ + E A L ++ VHH H ++HRD
Sbjct: 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRD 168
Query: 221 LKPENFLL-SNKDGGAMLKATDFGLSVFID---EGKVYRDIVGSAYYVAPEVLRRS-YGK 275
+K N LL SN ++K DFG S V R G+ YYVAPE+ RR Y K
Sbjct: 169 IKSANILLCSN----GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSK 224
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD-FESEPWLLISDSAKDLVRKM 334
+ D++S GV+LY LL+ PF E + + L G D IS +++V +
Sbjct: 225 KADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPS----ISPEMQEIVTAL 280
Query: 335 LIQDPKKRITSAEVLEHP 352
L DPK+R +S+++L P
Sbjct: 281 LSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 82.3 bits (203), Expect = 2e-17
Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 13/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G+G +G L + G Y K L + ++++R+ ++E Q++ L
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKK-LNLRNASRRERKAAEQEAQLLSQLK-HP 59
Query: 156 NIVEFRGAYEDRQS-VHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
NIV +R ++E +++VM C GG+L+ K+ Q E I + + H
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH 119
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL-R 270
++HRDLK +N L+ + ++K D G++ V ++ + ++G+ YY++PE+
Sbjct: 120 EKHILHRDLKTQNVFLTRTN---IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN 176
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ Y + DVW+ G +Y + + F A+ + I++G + + + S +L
Sbjct: 177 KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDY---SPELGEL 233
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ML + P+KR + +L P++
Sbjct: 234 IATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 2e-17
Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 68/298 (22%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQNI 157
+G G +G+ Y + TG A K I +L + + E + REI +++ L+ NI
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKI---RL--ETEDEGVPSTAIREISLLKELN-HPNI 60
Query: 158 VEFRGAYEDRQSVHLV-----------MELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
V ++LV M+ L +I Y L + I
Sbjct: 61 VRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQ------LLQGIA- 113
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVA 265
+CH V+HRDLKP+N LL +++G LK DFGL+ F + Y V + +Y A
Sbjct: 114 ---YCHSHRVLHRDLKPQN-LLIDREGA--LKLADFGLARAFGVPVRTYTHEVVTLWYRA 167
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------- 310
PE+L R Y +D+WS G I +++ P F ++E D + +
Sbjct: 168 PEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE---IDQLFRIFRTLGTPDEDVW 224
Query: 311 GGV----DFES-------EPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
GV D++ + + + DL+ KML+ DP KRI++ L+HP+
Sbjct: 225 PGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 2e-17
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 39/291 (13%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
E+GRG FG +G A K I R V++++++ + ++ ++ S IV+F
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRI--RSTVDEKEQKRLLMDLDVVMRSSDCPYIVKF 68
Query: 161 RGAYEDRQSVHLVMELCSGG-ELFDKII---AQGHYTEKAAAALCRAIVNVVHHC-HFMG 215
GA + MEL + F K + + E+ + A V +++ +
Sbjct: 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL----R 270
++HRD+KP N LL D +K DFG+S +D RD G Y+APE + R
Sbjct: 129 IIHRDVKPSNILL---DRNGNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPSAR 184
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPF--WAETEKGIFDA----------ILKGGVDFESE 318
Y DVWS G+ LY + +G P+ W +FD IL + E
Sbjct: 185 DGYDVRSDVWSLGITLYEVATGKFPYPKW----NSVFDQLTQVVKGDPPILSNSEERE-- 238
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAV 369
S S + + LI+D KR E+LEHP++++ E + + + V
Sbjct: 239 ----FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD-YEERNVDVAAYV 284
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 78/268 (29%), Positives = 126/268 (47%), Gaps = 21/268 (7%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
ELGRG +G+ TG A K I R VN Q+++ + ++ I V F
Sbjct: 8 ELGRGAYGVVDKMRHVPTGTIMAVKRI--RATVNSQEQKRLLMDLDISMRSVDCPYTVTF 65
Query: 161 RGAYEDRQSVHLVMEL--CSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHF-MGV 216
GA V + ME+ S + + K+ +G E + +IV + + H + V
Sbjct: 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV 125
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL-----RR 271
+HRD+KP N L+ N++G +K DFG+S ++ + G Y+APE + ++
Sbjct: 126 IHRDVKPSNVLI-NRNG--QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 182
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL---LISDSAK 328
Y + DVWS G+ + L +G P+ ++ K F LK V+ E P L S +
Sbjct: 183 GYDVKSDVWSLGITMIELATGRFPY--DSWKTPFQQ-LKQVVE-EPSPQLPAEKFSPEFQ 238
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
D V K L ++ K+R E+L+HP+
Sbjct: 239 DFVNKCLKKNYKERPNYPELLQHPFFEL 266
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 3e-17
Identities = 84/301 (27%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-QDREDIKREIQIMQHLS--GQQN 156
+ +G G FG+ + T+ G A K K+ N Q+ KR + ++ L N
Sbjct: 6 RPIGYGAFGVVWSVTDPRDGKRVALK-----KMPNVFQNLVSCKRVFRELKMLCFFKHDN 60
Query: 157 IVEFRGAYEDRQSVHL--------VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
++ A + Q H+ V EL +L I++ + I+ +
Sbjct: 61 VL---SALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGL 116
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF--IDEGKVYRDIVGSAYYVAP 266
+ H G++HRD+KP N L+++ +LK DFGL+ DE K V + YY AP
Sbjct: 117 KYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEEPDESKHMTQEVVTQYYRAP 173
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLS---------------------GVPPFWAETE-- 301
E+L R Y +D+WS G I LL G P A
Sbjct: 174 EILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233
Query: 302 KGIFDAILKGGVDFESEP--WLLISDS---AKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+G IL+G S P + L S + A L+ +ML+ DP KRI++A+ L HP++ E
Sbjct: 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293
Query: 357 G 357
G
Sbjct: 294 G 294
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 3e-17
Identities = 78/312 (25%), Positives = 131/312 (41%), Gaps = 42/312 (13%)
Query: 59 PQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENST 118
P P P SS++S LE + + +G G G Y T
Sbjct: 46 PLPPPSSSSSSSSSSSASGSAPSAAKSLSELERVNR-------IGSGAGGTVYKVIHRPT 98
Query: 119 GNSYACKSILKRKLVNKQD--REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176
G YA K I N +D R I REI+I++ ++ N+V+ ++ + +++E
Sbjct: 99 GRLYALKVIYG----NHEDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVLLEF 153
Query: 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236
GG L IA E+ A + R I++ + + H ++HRD+KP N L+ +
Sbjct: 154 MDGGSLEGTHIAD----EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKN 206
Query: 237 LKATDFGLSVFIDEG-KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYIL 289
+K DFG+S + + VG+ Y++PE + G D+WS GV +
Sbjct: 207 VKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEF 266
Query: 290 LSGVPPF-------WAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKR 342
G PF WA + AI + E S + + L ++P KR
Sbjct: 267 YLGRFPFGVGRQGDWA----SLMCAIC---MSQPPEAPATASREFRHFISCCLQREPAKR 319
Query: 343 ITSAEVLEHPWM 354
++ ++L+HP++
Sbjct: 320 WSAMQLLQHPFI 331
|
Length = 353 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 82.8 bits (204), Expect = 4e-17
Identities = 86/307 (28%), Positives = 133/307 (43%), Gaps = 59/307 (19%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K +G G GI + G + A K L R N+ + RE+ +++ ++ +
Sbjct: 23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKK-LSRPFQNQTHAKRAYRELVLLKCVN-HK 80
Query: 156 NIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTE---KAAAALCRAIVN 206
NI+ + E+ Q V+LVMEL D + Q + E + + L ++
Sbjct: 81 NIISLLNVFTPQKSLEEFQDVYLVMEL------MDANLCQVIHMELDHERMSYLLYQMLC 134
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
+ H H G++HRDLKP N ++ + LK DFGL+ + V + YY AP
Sbjct: 135 GIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTACTNFMMTPYVVTRYYRAP 191
Query: 267 EV-LRRSYGKEIDVWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILK- 310
EV L Y + +D+WS G I+ L+ G F W + T F L+
Sbjct: 192 EVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251
Query: 311 ------------GGVDFES--EPWLLISDS---------AKDLVRKMLIQDPKKRITSAE 347
G+ FE W+ S+S A+DL+ KML+ DP KRI+ E
Sbjct: 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311
Query: 348 VLEHPWM 354
L HP++
Sbjct: 312 ALRHPYI 318
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 6e-17
Identities = 80/293 (27%), Positives = 125/293 (42%), Gaps = 50/293 (17%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG--QQN 156
E+G G +G Y + +G+ A KS+ ++ +D + RE+ +++ L N
Sbjct: 7 EIGVGAYGTVYKARDPHSGHFVALKSV---RVQTNEDGLPLSTVREVALLKRLEAFDHPN 63
Query: 157 IVEFR----GAYEDRQS-VHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
IV + DR++ V LV E DK+ G E L R + +
Sbjct: 64 IVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKD-LMRQFLRGLD 122
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H ++HRDLKPEN L+++ G +K DFGL+ +V + +Y APEVL
Sbjct: 123 FLHANCIVHRDLKPENILVTS---GGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVL 179
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLL-- 322
+S Y +D+WS G I + P F +E IFD I G+ E + W
Sbjct: 180 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI---GLPPEDD-WPRDV 235
Query: 323 ---------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
I +S L+ +ML +P KRI++ L+HP+
Sbjct: 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 2e-16
Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 46/288 (15%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQN 156
++G G +G + T A LKR ++ D E + REI +++ L +N
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVA----LKRVRLDDDD-EGVPSSALREICLLKELK-HKN 60
Query: 157 IVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
IV + + LV E C + FD G + + ++ + CH
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSH 118
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RR 271
V+HRDLKP+N LL NK+G LK DFGL+ F + Y V + +Y P+VL +
Sbjct: 119 NVLHRDLKPQN-LLINKNG--ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 175
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETE-----KGIFDAI-------------LKGGV 313
Y ID+WSAG I L + P + + K IF + L
Sbjct: 176 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235
Query: 314 DFESEP----WLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
+ P + + + + +DL++ +L+ +P +RI++ E L+HP+
Sbjct: 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 2e-16
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 72/302 (23%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK---------REIQIMQH 150
+++G G +G+ Y TG A K I R D + REI +++
Sbjct: 6 EKIGEGTYGVVYKARNKLTGEVVALKKI----------RLDTETEGVPSTAIREISLLKE 55
Query: 151 LSGQQNIVEFRGAYEDRQSVHLV-----------MELCSGGELFDKIIAQGHYTEKAAAA 199
L+ NIV+ ++LV M+ + +I Y +
Sbjct: 56 LN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKS--YLFQ---- 108
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIV 258
++ + CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V
Sbjct: 109 ----LLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEV 161
Query: 259 GSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFD 306
+ +Y APE+L + Y +D+WS G I +++ F ++E G D
Sbjct: 162 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 221
Query: 307 AILKGGV----DFESE--PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
++ GV D++ W + + +DL+ +ML DP KRI++ L H
Sbjct: 222 EVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281
Query: 352 PW 353
P+
Sbjct: 282 PF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 3e-16
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 80
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 81 LLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 137
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 138 AGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ E L+HP++
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI 314
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 4e-16
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 55/301 (18%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQI---MQHLS 152
+++G G +G+ Y + T + A K I +L +Q+ E + REI + MQH
Sbjct: 8 EKIGEGTYGVVYKARDRVTNETIALKKI---RL--EQEDEGVPSTAIREISLLKEMQH-- 60
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE--KAAAALCRAIVNVVHH 210
NIV + + ++LV E +L + + + + + I+ + +
Sbjct: 61 --GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAY 117
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL 269
CH V+HRDLKP+N L+ + LK DFGL+ F + + V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLIDRRTNA--LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL 175
Query: 270 --RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-------------GGV- 313
R Y +D+WS G I +++ P F ++E D + K GV
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE---IDELFKIFRILGTPNEETWPGVT 232
Query: 314 ---DFESE--PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359
D++S W + + DL+ KML DP KRIT+ LEH + ++ G+
Sbjct: 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292
Query: 360 A 360
A
Sbjct: 293 A 293
|
Length = 294 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 79.3 bits (195), Expect = 4e-16
Identities = 79/316 (25%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 66
Query: 145 IQIMQHLS-----GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA 199
+++++H+ G ++ + E+ V+LV L G + I+ T+
Sbjct: 67 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 124
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 125 LIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYVA 179
Query: 260 SAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ +
Sbjct: 180 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239
Query: 318 E--------------------PWLLISD-------SAKDLVRKMLIQDPKKRITSAEVLE 350
E P + ++ A DL+ KML+ D KRIT+A+ L
Sbjct: 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299
Query: 351 HPWMREGGEASDKPIG 366
H + + + D+P+
Sbjct: 300 HAYFAQYHDPDDEPVA 315
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 9e-16
Identities = 79/313 (25%), Positives = 129/313 (41%), Gaps = 67/313 (21%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG 153
Y + +LG G FG Y + TG A K IL + N++D I REI+I++ L
Sbjct: 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKIL---MHNEKDGFPITALREIKILKKLK- 65
Query: 154 QQNIVEF--------RGAYEDRQSVHLVM-----ELCSGGELFDKIIAQGHYTEKAAAAL 200
N+V + R SV++V +L G L + + TE
Sbjct: 66 HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLENPSV---KLTESQIKCY 120
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV------- 253
++ +++ H ++HRD+K N L+ N+ +LK DFGL+ D
Sbjct: 121 MLQLLEGINYLHENHILHRDIKAANILIDNQ---GILKIADFGLARPYDGPPPNPKGGGG 177
Query: 254 -----YRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----K 302
Y ++V + +Y PE+L R Y +D+W G + + + P +++
Sbjct: 178 GGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237
Query: 303 GIFDAI----------------LKGGVDFESEPWLLISDSAK------DLVRKMLIQDPK 340
IF +G F + P L K DL+ K+L DP
Sbjct: 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPY 297
Query: 341 KRITSAEVLEHPW 353
KR+T+++ LEHP+
Sbjct: 298 KRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 1e-15
Identities = 80/313 (25%), Positives = 133/313 (42%), Gaps = 44/313 (14%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K + ++ Y K++G G +G + TG A K L R ++ + RE++
Sbjct: 8 KTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKK-LYRPFQSELFAKRAYRELR 66
Query: 147 IMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL 200
+++H+ +N++ + + +LVM G K++ +E L
Sbjct: 67 LLKHMK-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFL 123
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ + + H G++HRDLKP N L N+D LK DFGL+ D V +
Sbjct: 124 VYQMLKGLKYIHAAGIIHRDLKPGN-LAVNED--CELKILDFGLARQTDSEMT--GYVVT 178
Query: 261 AYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-GGVDFES 317
+Y APEV+ Y + +D+WS G I+ +L+G P F I+K G +
Sbjct: 179 RWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238
Query: 318 EPWLLISDSAKDLVR--------------------------KMLIQDPKKRITSAEVLEH 351
L S+ AK+ V+ KML+ D + RIT+AE L H
Sbjct: 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298
Query: 352 PWMREGGEASDKP 364
P+ E + D+
Sbjct: 299 PYFEEFHDPEDET 311
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 2e-15
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
L+ F D D GTI+ +ELK L LG LSE E+ +++ D DG+G ID+ EF+
Sbjct: 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 80/314 (25%), Positives = 130/314 (41%), Gaps = 47/314 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + + +G+G +G+ + TG A K I + D I REI++++ L
Sbjct: 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-NDVFEHVSDATRILREIKLLRLLR-HP 59
Query: 156 NIVEFRG-----AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+IVE + + + + +++V EL +L I A T + ++ + +
Sbjct: 60 DIVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKY 118
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKV--YRDIVGSAYYVAP 266
H V HRDLKP+N +L+N D LK DFGL+ F D + D V + +Y AP
Sbjct: 119 IHTANVFHRDLKPKN-ILANAD--CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 175
Query: 267 EVLRRSYGK---EIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL-------------- 309
E+ + K ID+WS G I +L+G P F + D I
Sbjct: 176 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRV 235
Query: 310 --------------KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
K V F S+ + A L+ ++L DPK R T+ E L P+ +
Sbjct: 236 RNEKARRYLSSMRKKQPVPF-SQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294
Query: 356 EGGEASDKPIGSAV 369
+ +P +
Sbjct: 295 GLAKVEREPSAQPI 308
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 2e-15
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 93 RQFYTLGKELGRGQFG-ITYLC---TENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
+++ + LG G FG ++ C + TG A K+ LKR+ +Q+ K+EI I+
Sbjct: 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKT-LKRE-CGQQNTSGWKKEINIL 60
Query: 149 QHLSGQQNIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
+ L +NIV+++G ++ + + L+ME G L D Y K L + ++
Sbjct: 61 KTLY-HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------YLPKHKLNLAQLLLF 112
Query: 207 VVHHCHFMGVMH------RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY----RD 256
C M +H RDL N LL N ++K DFGL+ + EG Y D
Sbjct: 113 AQQICEGMAYLHSQHYIHRDLAARNVLLDNDR---LVKIGDFGLAKAVPEGHEYYRVRED 169
Query: 257 IVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLS 291
++ A E L+ SY DVWS GV LY LL+
Sbjct: 170 GDSPVFWYAVECLKENKFSYAS--DVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 85/316 (26%), Positives = 139/316 (43%), Gaps = 47/316 (14%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
+ K + ++ + YT K++G G +G + TG A K L R ++ + RE
Sbjct: 6 VNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKK-LSRPFQSEIFAKRAYRE 64
Query: 145 IQIMQHLSGQQNIVEFRG------AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+ +++H+ +N++ + ++ Q +LVM KI+ +E
Sbjct: 65 LTLLKHMQ-HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTD--LQKIMGH-PLSEDKVQ 120
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI 257
L ++ + + H G++HRDLKP N L N+D LK DFGL+ D E Y
Sbjct: 121 YLVYQMLCGLKYIHSAGIIHRDLKPGN-LAVNED--CELKILDFGLARHADAEMTGY--- 174
Query: 258 VGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----G 311
V + +Y APEV+ Y + +D+WS G I+ +L+G F + ILK
Sbjct: 175 VVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 234
Query: 312 GVDF-------------ESEP----------WLLISDSAKDLVRKMLIQDPKKRITSAEV 348
G +F +S P + S A DL+ KML D KR+T+ E
Sbjct: 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA 294
Query: 349 LEHPWMREGGEASDKP 364
LEHP+ +A ++
Sbjct: 295 LEHPYFDSFRDADEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 78.8 bits (194), Expect = 2e-15
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + K + RG FG YL + + YA K + K ++NK ++ E + LS
Sbjct: 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-LSKSP 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
IV + + +V+LVME GG++ + G++ E+ A + + + H G
Sbjct: 65 FIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
++HRDLKP+N L+SN+ +K TDFGLS
Sbjct: 125 IIHRDLKPDNMLISNE---GHIKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 87/318 (27%), Positives = 130/318 (40%), Gaps = 86/318 (27%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + TG + A K L R N + RE+ +M+ L +NI+
Sbjct: 22 KPIGSGAQGIVCAAYDTVTGQNVAIKK-LSRPFQNVTHAKRAYRELVLMK-LVNHKNIIG 79
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI-VNVVH--- 209
+ E+ Q V+LVMEL A LC+ I +++ H
Sbjct: 80 LLNVFTPQKSLEEFQDVYLVMELMD-------------------ANLCQVIQMDLDHERM 120
Query: 210 ------------HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
H H G++HRDLKP N ++ + LK DFGL+ +
Sbjct: 121 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPY 177
Query: 258 VGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPF--------WAE------TEK 302
V + YY APEV L Y + +D+WS G I+ ++ G F W + T
Sbjct: 178 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237
Query: 303 GIFDAILKGGVD--FESEP-------------WLLISDS----------AKDLVRKMLIQ 337
F + L+ V E+ P L DS A+DL+ KML+
Sbjct: 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVI 297
Query: 338 DPKKRITSAEVLEHPWMR 355
DP+KRI+ + L+HP++
Sbjct: 298 DPEKRISVDDALQHPYIN 315
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 3e-15
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 15/243 (6%)
Query: 118 TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF--RGAYEDRQSVHLVME 175
TG+ A K + + R +RE + L NIV G + V E
Sbjct: 2 TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLY-HPNIVALLDSGEAPPGL-LFAVFE 59
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
G L + + A G L +++ + H G++HRDLKP+N ++S
Sbjct: 60 YVPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRP 119
Query: 236 MLKATDFGLSVF------IDEGKVYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVIL 286
K DFG+ D + R +++G+ Y APE LR D+++ G+I
Sbjct: 120 HAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIF 179
Query: 287 YILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA 346
L+G + I L VD PW+ ++RK L +DP++R SA
Sbjct: 180 LECLTGQRVVQGASVAEILYQQL-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASA 237
Query: 347 EVL 349
L
Sbjct: 238 PAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 7e-15
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 44/315 (13%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + A K L R + RE
Sbjct: 6 LNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKK-LSRPFQSLIHARRTYRE 64
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G + I+ +++
Sbjct: 65 LRLLKHMK-HENVIGLLDVFTPATSIENFNEVYLVTNLM--GADLNNIVKCQKLSDEHVQ 121
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L ++ + + H G++HRDLKP N + N+D L+ DFGL+ D+ V
Sbjct: 122 FLIYQLLRGLKYIHSAGIIHRDLKPSN-VAVNED--CELRILDFGLARQADDEMT--GYV 176
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPF----WAETEKGIFDAILKGG 312
+ +Y APE++ Y + +D+WS G I+ LL G F + + K I + +
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236
Query: 313 VDF-------------ESEPWLLISDSAK----------DLVRKMLIQDPKKRITSAEVL 349
+ +S P + D K DL+ KML+ D KRI+++E L
Sbjct: 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL 296
Query: 350 EHPWMREGGEASDKP 364
HP+ + + D+P
Sbjct: 297 AHPYFSQYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 2e-14
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK--QDREDIKREIQIMQHLSGQ 154
TL +E+G GQFG+ +L + K + K + + ED E Q+M LS
Sbjct: 7 TLVQEIGSGQFGLVWL-------GYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLS-H 58
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHF 213
+V+ G +R + LV E G L D + AQ G ++++ +C + + +
Sbjct: 59 PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLES 118
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---APEVLR 270
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + V +PEV
Sbjct: 119 SNVIHRDLAARNCLVGEN---QVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFS 174
Query: 271 RS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
S Y + DVWS GV+++ + S G P+ + + + I G
Sbjct: 175 FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG 217
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 2e-14
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 2e-14
Identities = 78/302 (25%), Positives = 128/302 (42%), Gaps = 63/302 (20%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-REIQIMQHLSGQQNIVE 159
+LG G + Y T N A K I +L +++ RE+ +++ L NIV
Sbjct: 13 KLGEGTYATVYKGRSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK-HANIVT 68
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV------------ 207
+S+ LV E DK + Q Y + C +N+
Sbjct: 69 LHDIIHTEKSLTLVFEY------LDKDLKQ--YLDD-----CGNSINMHNVKLFLFQLLR 115
Query: 208 -VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVA 265
+++CH V+HRDLKP+N L++ + LK DFGL+ K Y + V + +Y
Sbjct: 116 GLNYCHRRKVLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYSNEVVTLWYRP 172
Query: 266 PEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GGVDFESEPWL 321
P++L S Y +ID+W G I Y + +G P F T + I + G E+ P +
Sbjct: 173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232
Query: 322 LISDSAK------------------------DLVRKMLIQDPKKRITSAEVLEHPWMREG 357
L ++ K +L+ K+L + +KRI++ E ++HP+
Sbjct: 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292
Query: 358 GE 359
GE
Sbjct: 293 GE 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 3e-14
Identities = 75/279 (26%), Positives = 113/279 (40%), Gaps = 58/279 (20%)
Query: 102 LGRGQFGITYLCT-----ENSTGNS-YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
LG G FG Y T +G A K++ RK Q++++ +E +M + +
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTL--RKGATDQEKKEFLKEAHLMSNFN-HP 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA-----------LCRAI 204
NIV+ G + +++MEL GG+L Y A L
Sbjct: 60 NIVKLLGVCLLNEPQYIIMELMEGGDLL-------SYLRDARVERFGPPLLTLKELLDIC 112
Query: 205 VNVVHHCHF---MGVMHRDLKPENFLLSNKDGGA--MLKATDFGLSVFIDEGKVYRDIVG 259
++V C + M +HRDL N L+S K A ++K DFGL+ RDI
Sbjct: 113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA---------RDIYK 163
Query: 260 SAYY------------VAPEVLRRS-YGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
S YY +APE L + + DVWS GV+++ IL G P+ A + +
Sbjct: 164 SDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL 223
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT 344
+ GG + D L+ QDP +R T
Sbjct: 224 QHVTAGG---RLQKPENCPDKIYQLMTNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 3e-14
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQ 149
R+ TLG+ +G GQFG Y S N + A K+ + + RE +E IM+
Sbjct: 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTC--KNCTSPSVREKFLQEAYIMR 62
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA------------A 197
+IV+ G + V +VMEL GEL Y + +
Sbjct: 63 QFD-HPHIVKLIGVITE-NPVWIVMELAPLGEL-------RSYLQVNKYSLDLASLILYS 113
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
L A+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+
Sbjct: 114 YQLSTALA----YLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKAS 166
Query: 258 VGS--AYYVAPEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF-WAETEKGI 304
G ++APE + R + DVW GV ++ IL+ GV PF + I
Sbjct: 167 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI 218
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 3e-14
Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 50/288 (17%)
Query: 89 LEDIRQFY---TLGKELG--RGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR 143
L ++ QF + K+L G+FG + T + K I K K N
Sbjct: 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKII-KAKNFN--------- 55
Query: 144 EIQIMQH--LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALC 201
I+ M H + N ++ + + L+M+ G+LFD + +G +E +
Sbjct: 56 AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKII 115
Query: 202 RAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
R +V ++ H ++H D+K EN L L D+GL I Y G+
Sbjct: 116 RQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYL--CDYGLCKIIGTPSCYD---GTL 170
Query: 262 YYVAPE-VLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
Y +PE + +Y D W+ GV+ Y LL+G PF K D E +
Sbjct: 171 DYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPF-------------KEDEDEELDLE 217
Query: 321 LL-------------ISDSAKDLVRKMLIQDPKKRITS-AEVLEHPWM 354
L +S +A D V+ ML + R+T+ E+++HP++
Sbjct: 218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265
|
Length = 267 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 5e-14
Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 38/246 (15%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TL + LG G FG Y ++ A K++ + ++QD D E I
Sbjct: 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTL--PESCSEQDESDFLMEALI 62
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRA 203
M + QNIV G +R +++EL +GG+L + + L
Sbjct: 63 MSKFN-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFC 121
Query: 204 IVNVVHHCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
+V C ++ +HRD+ N LL+ K G + K DFG++ RDI +
Sbjct: 122 ARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRA 172
Query: 261 AYY------------VAPEV-LRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFD 306
+YY + PE L + + DVWS GV+L+ + S G P+ T + + +
Sbjct: 173 SYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232
Query: 307 AILKGG 312
+ GG
Sbjct: 233 FVTGGG 238
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 7e-14
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 100 KELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG LC +++TG A K K + + D +REI+I++ L
Sbjct: 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVK---KLQHSTAEHLRDFEREIEILKSLQ-HD 65
Query: 156 NIVEFRG-AYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKA-----AAALCRAIVNVV 208
NIV+++G Y R+++ LVME G L D + + A+ +C+ +
Sbjct: 66 NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGM---- 121
Query: 209 HHCHFMGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSA 261
++G +HRDL N L+ ++ +K DFGL+ + + K Y +
Sbjct: 122 ---EYLGSKRYVHRDLATRNILVESE---NRVKIGDFGLTKVLPQDKEYYKVREPGESPI 175
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLS 291
++ APE L S + DVWS GV+LY L +
Sbjct: 176 FWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 45/181 (24%)
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL----SVFIDEGKVYRDIVGSAYYVA 265
+CH V+HRDLKP+N L+S + LK DFGL SV K Y + V + +Y
Sbjct: 118 YCHQRRVLHRDLKPQNLLISER---GELKLADFGLARAKSV---PSKTYSNEVVTLWYRP 171
Query: 266 PEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------- 310
P+VL S Y +D+W G I Y + +G P F T+ + D + K
Sbjct: 172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD--VEDQLHKIFRVLGTPTEETW 229
Query: 311 GGV----DFESE--------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
GV +F+ P L ++L K L +PKKRI++AE ++HP
Sbjct: 230 PGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP 289
Query: 353 W 353
+
Sbjct: 290 Y 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 2e-13
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 47/265 (17%)
Query: 100 KELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
+ +GRG FG + L +N+ +C+ L L K +E +I++ S N
Sbjct: 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAK-----FLQEARILKQYS-HPN 54
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG---------HYTEKAAAALCRAIVNV 207
IV G +Q +++VMEL GG+ + +G E AAA +
Sbjct: 55 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYL---E 111
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG----SAYY 263
HC +HRDL N L++ K+ +LK +DFG+S ++G VY G +
Sbjct: 112 SKHC-----IHRDLAARNCLVTEKN---VLKISDFGMSREEEDG-VYASTGGMKQIPVKW 162
Query: 264 VAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE L Y E DVWS G++L+ S G P+ + + +AI +G L
Sbjct: 163 TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR-------L 215
Query: 322 LISDSAKDLVRKMLIQ----DPKKR 342
+ D V +++ + DP +R
Sbjct: 216 PCPELCPDAVYRLMERCWEYDPGQR 240
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 5e-13
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 479 QYFDKDNSGYITRDELETAMKDYGIGD-----EASIKEIISEVDTDNDGRINYEEFCTMM 533
+ DKD GYI +EL +K G+ E I+ +E+D D DGRI++EEF M
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 5e-13
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 23/285 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG G G Y T A K I V Q + I E++I+ I+ F
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQ--KQIMSELEILYKCDSPY-IIGFY 65
Query: 162 GAYEDRQSVHLVMELCSGGEL--FDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
GA+ + + E GG L + KI E + A+V + + + ++HR
Sbjct: 66 GAFFVENRISICTEFMDGGSLDVYRKI------PEHVLGRIAVAVVKGLTYLWSLKILHR 119
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
D+KP N L++ + +K DFG+S + + + VG+ Y+APE + YG D
Sbjct: 120 DVKPSNMLVNTR---GQVKLCDFGVSTQL-VNSIAKTYVGTNAYMAPERISGEQYGIHSD 175
Query: 279 VWSAGVILYILLSGVPPF-WAETEKGIFDAI--LKGGVDFESEPWL---LISDSAKDLVR 332
VWS G+ L G P+ + +G + L+ VD E P L S+ +
Sbjct: 176 VWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD-EDPPVLPVGQFSEKFVHFIT 234
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377
+ + + PK+R +++HP++ + + + + + V +++ R
Sbjct: 235 QCMRKQPKERPAPENLMDHPFIVQYNDGNAEVVSMWVCRALEERR 279
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 5e-13
Identities = 77/303 (25%), Positives = 122/303 (40%), Gaps = 60/303 (19%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-REIQIMQH 150
+ + L K LG G + + T N A K I +L +++ RE+ ++++
Sbjct: 4 LETYVKLDK-LGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKN 59
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV--- 207
L NIV + + LV E D + Q Y + + V +
Sbjct: 60 LK-HANIVTLHDIIHTERCLTLVFEY------LDSDLKQ--YLDNCGNLMSMHNVKIFMF 110
Query: 208 -----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL----SVFIDEGKVYRDIV 258
+ +CH ++HRDLKP+N L++ K LK DFGL SV K Y + V
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLINEK---GELKLADFGLARAKSV---PTKTYSNEV 164
Query: 259 GSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------ 310
+ +Y P+VL S Y ID+W G ILY + +G P F T K I +
Sbjct: 165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPT 224
Query: 311 ----GGVDFESE----------PWLLISDSAK------DLVRKMLIQDPKKRITSAEVLE 350
G+ E LI+ + + DL+ +L+ + K RI++ L
Sbjct: 225 EETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284
Query: 351 HPW 353
H +
Sbjct: 285 HSY 287
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 6e-13
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 42/273 (15%)
Query: 100 KELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
K+LG G FG+ +++G A K + KL + D D +E IM L +N
Sbjct: 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMD--DFLKEAAIMHSLD-HEN 57
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFD--KIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
++ G + +V EL G L D + A GH+ I N + +
Sbjct: 58 LIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---------- 264
+HRDL N LL++ D +K DFGL + + + +YV
Sbjct: 117 RFIHRDLAARNILLASDD---KVKIGDFGLMRALPQNE--------DHYVMEEHLKVPFA 165
Query: 265 --APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320
APE LR R++ DVW GV L+ + + G P+ + I I K G E
Sbjct: 166 WCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPE- 224
Query: 321 LLISDSAKDLVRKML---IQDPKKRITSAEVLE 350
+D+ ML +P R T A + E
Sbjct: 225 ----ACPQDIYNVMLQCWAHNPADRPTFAALRE 253
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 9e-13
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G I+ RKL++ + R I RE+Q++ H
Sbjct: 12 ELGAGNGGVVFKVSHKPSG------LIMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC-HFMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 125 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHY 179
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 180 SVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 9e-13
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
++F ++LG G FG LC ++TG A KS+ + D+K+EI+I+
Sbjct: 3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEIL 60
Query: 149 QHLSGQQNIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++L +NIV+++G + + L+ME G L + + K L + +
Sbjct: 61 RNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRN-----KNKINLKQQLKY 114
Query: 207 VVHHCHFMGVM------HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR----D 256
V C M + HRDL N L+ ++ +K DFGL+ I+ K Y D
Sbjct: 115 AVQICKGMDYLGSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDKEYYTVKDD 171
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS 291
+ ++ APE L +S + DVWS GV LY LL+
Sbjct: 172 LDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 97 TLGKELGRGQFGIT--YLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHL 151
L +G+ + +L T A +K+ ++ +ED+K EI + L
Sbjct: 1 ELLTLIGKCFEDLMIVHLAKHKPTNTLVA----VKKINLDSCSKEDLKLLQQEIITSRQL 56
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYT----EKAAAALCRAIVNV 207
NI+ + ++ +++V L + G D + + H+ E A A + + ++N
Sbjct: 57 Q-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNA 113
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA------ 261
+ + H G +HR +K + LLS DG +L + +S I GK R +
Sbjct: 114 LDYIHSKGFIHRSVKASHILLS-GDGKVVLSGLRYSVS-MIKHGKRQRVVHDFPKSSVKN 171
Query: 262 -YYVAPEVLRRS---YGKEIDVWSAGVILYILLSGVPPF 296
+++PEVL+++ Y ++ D++S G+ L +G PF
Sbjct: 172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPF 210
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 70/275 (25%), Positives = 109/275 (39%), Gaps = 39/275 (14%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
+++ LG +G+G+FG L G A K LK Q E +
Sbjct: 4 NSKEL----KLGATIGKGEFGDVMLGD--YRGQKVAVKC-LKDDSTAAQAFLA---EASV 53
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIV 205
M L N+V+ G +++V E + G L D + ++G T +
Sbjct: 54 MTTLR-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVC 112
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL----SVFIDEGKVYRDIVGSA 261
+ + +HRDL N L+S D A K +DFGL S D GK+
Sbjct: 113 EGMEYLEEKNFVHRDLAARNVLVSE-DLVA--KVSDFGLAKEASQGQDSGKL------PV 163
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEP 319
+ APE LR + + DVWS G++L+ + S G P+ K + + KG + E
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG---YRMEA 220
Query: 320 WLLISDSAKDLVRKMLIQ----DPKKRITSAEVLE 350
+ V K++ DP KR T ++ E
Sbjct: 221 ----PEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 2e-12
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 54/245 (22%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKRE 144
PL +R +ELG G FG Y + S+ + L + +++ ++E
Sbjct: 3 PLSAVR----FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQE 58
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
++M L NIV G Q ++ E + G+L + ++ +++ A + +
Sbjct: 59 AELMSDLQ-HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV 117
Query: 205 VNVVHHCHFMGV----------------MHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
+ + F+ + +HRDL N L+ G +K +DFGLS
Sbjct: 118 KSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE---GLTVKISDFGLS--- 171
Query: 249 DEGKVYRDIVGSAYY------------VAPEVLRRSYGK---EIDVWSAGVILYILLS-G 292
RDI + YY + PE + YGK E D+WS GV+L+ + S G
Sbjct: 172 ------RDIYSADYYRVQSKSLLPVRWMPPEAIL--YGKFTTESDIWSFGVVLWEIFSYG 223
Query: 293 VPPFW 297
+ P++
Sbjct: 224 LQPYY 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 2e-12
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD---REDIKREIQIMQ 149
R + GK LG G FG T S A + + L RE + E++IM
Sbjct: 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMS 93
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
HL +NIV GA + ++ E C G+L + + + L + V
Sbjct: 94 HLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS-YQVAK 152
Query: 210 HCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV-- 264
F+ +HRDL N LL++ G ++K DFGL+ RDI+ + YV
Sbjct: 153 GMAFLASKNCIHRDLAARNVLLTH---GKIVKICDFGLA---------RDIMNDSNYVVK 200
Query: 265 ----------APE-VLRRSYGKEIDVWSAGVILYILLS-GVPPF 296
APE + Y E DVWS G++L+ + S G P+
Sbjct: 201 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 3e-12
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 31/266 (11%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ +L A K I + + +D E ++M LS N
Sbjct: 7 TFLKELGSGQFGVVHLGKWRGK-IDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HPN 60
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA-----AAALCRAIVNVVHHC 211
+V+ G ++ + +V E + G L + + + + +C A+ + +
Sbjct: 61 LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG 120
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDIVGSAYYV---AP 266
+HRDL N L+ + ++K +DFGL+ ++ D+ Y G+ + V P
Sbjct: 121 ----FIHRDLAARNCLVGEDN---VVKVSDFGLARYVLDDQ---YTSSQGTKFPVKWAPP 170
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
EV S + + DVWS GV+++ + S G P+ + + +++ G + L
Sbjct: 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG---YRLYRPKLAP 227
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLE 350
++ + P+ R ++L
Sbjct: 228 TEVYTIMYSCWHEKPEDRPAFKKLLS 253
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 4e-12
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ +L + A K+I + + ED E ++M LS
Sbjct: 7 TFMKELGSGQFGVVHLGKWRAQ-IKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPK 60
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ +++V E G L + + QG ++ ++C+ + + +
Sbjct: 61 LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS 120
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDIVGSAYYV---APEVLR 270
+HRDL N L+S+ ++K +DFG++ ++ DE Y G+ + V PEV
Sbjct: 121 FIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDE---YTSSSGAKFPVKWSPPEVFN 174
Query: 271 RS-YGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKG 311
S Y + DVWS GV+++ + G PF ++ + + I +G
Sbjct: 175 FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG 217
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 5e-12
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 257 IVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
I+G+ Y+APE+L + +G +D W+ GV L+ L+G+PPF ET + +F IL + +
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPW 599
Query: 316 -ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
E E L S +A++ + +L DP KR E+ +HP
Sbjct: 600 PEGEEKL--SVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 5e-12
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-REIQIMQHLSGQQNIV 158
++LG G + + T N A K I +L +++ RE+ +++ L NIV
Sbjct: 12 EKLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKDLK-HANIV 67
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV--------VHH 210
+S+ LV E DK + Q Y + + V + + +
Sbjct: 68 TLHDIVHTDKSLTLVFEY------LDKDLKQ--YMDDCGNIMSMHNVKIFLYQILRGLAY 119
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL 269
CH V+HRDLKP+N L++ + LK DFGL+ K Y + V + +Y P+VL
Sbjct: 120 CHRRKVLHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVL 176
Query: 270 RRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----------GGVDFES 317
S Y +ID+W G I + + SG P F T + I + G+
Sbjct: 177 LGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236
Query: 318 E----------PWLLISDSAK------DLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
E P LI+ + + +L+ K L + KKRI++ E ++H + R G
Sbjct: 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 5e-12
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG +G G FG+ Y T A K +L QD + RE+ IM++L+
Sbjct: 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVL-------QDPQYKNRELLIMKNLN-HI 119
Query: 156 NIVEFRGAY--------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA--------- 198
NI+ + Y E +++VME + K + HY A
Sbjct: 120 NIIFLKDYYYTECFKKNEKNIFLNVVMEFIP--QTVHKYMK--HYARNNHALPLFLVKLY 175
Query: 199 --ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
LCRA+ + H F + HRDLKP+N L+ LK DFG + + G+
Sbjct: 176 SYQLCRALAYI--HSKF--ICHRDLKPQNLLIDPNT--HTLKLCDFGSAKNLLAGQRSVS 229
Query: 257 IVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPF 296
+ S +Y APE++ + Y ID+WS G I+ ++ G P F
Sbjct: 230 YICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271
|
Length = 440 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 7e-12
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ +G I+ RKL++ + R I RE+Q++ H
Sbjct: 12 ELGAGNGGVVTKVQHKPSG------LIMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE-----KAAAALCRAIVNVVHHC 211
IV F GA+ + + ME GG L D+++ + K + A+ R + +
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH 123
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR 270
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+
Sbjct: 124 Q---IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ 175
Query: 271 RS-YGKEIDVWSAGVILYILLSG---VPPFWAETEKGIF 305
+ Y + D+WS G+ L L G +PP A+ + IF
Sbjct: 176 GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF 214
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 8e-12
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G+G FG Y A K+ R + + +E +I++ NIV+
Sbjct: 1 EKIGKGNFGDVYKGVLK-GNTEVAVKTC--RSTLPPDLKRKFLQEAEILKQYD-HPNIVK 56
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL--------CRAIVNVVHHC 211
G +Q +++VMEL GG L + K L + +
Sbjct: 57 LIGVCVQKQPIYIVMELVPGGSLLT-------FLRKKKNRLTVKKLLQMSLDAAAGMEYL 109
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY----YVAPE 267
+HRDL N L+ + +LK +DFG+S +EG +Y G + APE
Sbjct: 110 ESKNCIHRDLAARNCLVGENN---VLKISDFGMSR-EEEGGIYTVSDGLKQIPIKWTAPE 165
Query: 268 VLRRSYGK---EIDVWSAGVILYILLS-GVPPF 296
L YG+ E DVWS G++L+ S G P+
Sbjct: 166 ALN--YGRYTSESDVWSYGILLWETFSLGDTPY 196
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 1e-11
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 44/181 (24%)
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAP 266
+H H ++HRDLKP+N L+S LK DFGL+ + Y V + +Y P
Sbjct: 119 IHGQH---ILHRDLKPQNLLISYL---GELKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172
Query: 267 EVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GGVDFESEPW 320
+VL + Y +D+W AG I +L G P F ++ +F+ + K GV E + W
Sbjct: 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTE-DTW 229
Query: 321 LLISD----------------------------SAKDLVRKMLIQDPKKRITSAEVLEHP 352
+S A+DL +ML+ PK RI++ + L HP
Sbjct: 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP 289
Query: 353 W 353
+
Sbjct: 290 Y 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 1e-11
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+G G+FG G +I LK KQ R D E IM NI+
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQFD-HPNIIH 69
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVM 217
G + V ++ E G L D + Q G +T + R I + + M +
Sbjct: 70 LEGVVTKSRPVMIITEFMENGAL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYV 128
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAY---YVAPEVLR- 270
HRDL N L+++ + K +DFGLS F+++ Y +G + APE +
Sbjct: 129 HRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185
Query: 271 RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308
R + DVWS G++++ ++S G P+W + + + +AI
Sbjct: 186 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ + A K I + + ++ E ++M LS +
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMKLS-HEK 60
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA-AALCRAIVNVVHHCHFMG 215
+V+ G ++ +++V E S G L + + G + + +C+ + + +
Sbjct: 61 LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ 120
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDIVGSAYYV---APEVLR 270
+HRDL N L+ + G +K +DFGLS ++ DE Y VGS + V PEVL
Sbjct: 121 FIHRDLAARNCLV-DDQG--CVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLL 174
Query: 271 RS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
S + + DVW+ GV+++ + S G P+ + + +G
Sbjct: 175 YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG 217
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 3e-11
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQ 154
+ K +G G+FG G +I LK KQ R D E IM
Sbjct: 7 KIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQ-RRDFLSEASIMGQFD-H 64
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCH 212
NI+ G + V +V E G L D + + G +T + R I + + +
Sbjct: 65 PNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQLVGMLRGIASGMKYLS 123
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---------- 262
MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 124 DMGYVHRDLAARNILVNSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPIR 174
Query: 263 YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ APE + R + DVWS G++++ ++S G P+W + + + AI +G
Sbjct: 175 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG 225
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 4e-11
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 43/296 (14%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE---DIKREIQIMQH 150
Q Y E+G G +G + + G + LKR V + RE+ +++H
Sbjct: 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA---LKRVRVQTGEEGMPLSTIREVAVLRH 57
Query: 151 LSG--QQNIVEFRG----AYEDRQS-VHLVMELCSGG--ELFDKIIAQGHYTEKAAAALC 201
L N+V + DR++ + LV E DK+ G TE +
Sbjct: 58 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 117
Query: 202 RAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
+ ++ + H V+HRDLKP+N L+++ +K DFGL+ +V +
Sbjct: 118 Q-LLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTL 173
Query: 262 YYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAI-LKGGVDF 315
+Y APEV L+ SY +D+WS G I + P F ++ I D I L G D+
Sbjct: 174 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233
Query: 316 ESEPWLL------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
+ L I + KDL+ K L +P KRI++ L HP+
Sbjct: 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 6e-11
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
K +G G+FG + G +I LK KQ R+D E IM S NI
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ-RQDFLSEASIMGQFS-HHNI 68
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMG 215
+ G + ++ E G L DK + G ++ + R I + + M
Sbjct: 69 IRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAY---YVAPEVLR- 270
+HRDL N L+++ K +DFGLS V D+ + G + APE +
Sbjct: 128 YVHRDLAARNILVNSN---LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY 184
Query: 271 RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
R + DVWS G++++ ++S G P+W + + AI G
Sbjct: 185 RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 6e-11
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R+ L +ELG G FG +L C S ++ K R+D +RE +++ +
Sbjct: 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN 63
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-------------------- 190
L ++IV+F G D + +V E G+L + A G
Sbjct: 64 LQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122
Query: 191 HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
A+ + +V + HF+ HRDL N L+ ++K DFG+S
Sbjct: 123 SQMLHIASQIASGMVYLASQ-HFV---HRDLATRNCLVGA---NLLVKIGDFGMS----- 170
Query: 251 GKVYRDIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPPF 296
RD+ + YY + PE ++ R + E DVWS GVIL+ I G P+
Sbjct: 171 ----RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 226
Query: 297 WAETEKGIFDAILKGGV 313
+ + + + I +G V
Sbjct: 227 FQLSNTEVIECITQGRV 243
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 8e-11
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R+ L ELG G FG +L C ++ K ++ R+D +RE +++
Sbjct: 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTV 63
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD---------KIIAQ------GHYTEK 195
L Q+IV F G + + + +V E G+L KI+A G T
Sbjct: 64 LQ-HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR 255
A+ I + + + + +HRDL N L+ G ++K DFG+S R
Sbjct: 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ---GLVVKIGDFGMS---------R 170
Query: 256 DIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPPFWAETE 301
DI + YY + PE +L R + E D+WS GV+L+ I G P++ +
Sbjct: 171 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230
Query: 302 KGIFDAILKG 311
+ I +G
Sbjct: 231 TEAIECITQG 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 66/271 (24%), Positives = 101/271 (37%), Gaps = 45/271 (16%)
Query: 100 KELGRGQFGIT---YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
KELG G FG ++ A K++ + +++ RE +M L
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH--IAAGKKEFLREASVMAQLD-HPC 57
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI---VNVVHHCHF 213
IV G + + + LVMEL G L + + L + + + HF
Sbjct: 58 IVRLIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY---------- 263
+ HRDL N LL N+ K +DFG+S + GS YY
Sbjct: 117 V---HRDLAARNVLLVNRH---QAKISDFGMS------RALG--AGSDYYRATTAGRWPL 162
Query: 264 --VAPEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFES 317
APE + +YGK + DVWS GV L+ S G P+ + A+L+ G
Sbjct: 163 KWYAPECI--NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI-AMLESGERLPR 219
Query: 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEV 348
++ P+ R T +E+
Sbjct: 220 PE--ECPQEIYSIMLSCWKYRPEDRPTFSEL 248
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 17/225 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
T+ K +G G+FG G A K+ LK +KQ R D E IM
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKT-LKAGSSDKQ-RLDFLTEASIMGQFD- 63
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHC 211
NI+ G + V ++ E G L DK + + G +T + R I + + +
Sbjct: 64 HPNIIRLEGVVTKSRPVMIITEYMENGSL-DKFLRENDGKFTVGQLVGMLRGIASGMKYL 122
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG---SAYYVAPEV 268
M +HRDL N L+++ + K +DFGLS +++ + G + APE
Sbjct: 123 SEMNYVHRDLAARNILVNSN---LVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEA 179
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ R + DVWS G++++ ++S G P+W + + + A+ G
Sbjct: 180 IAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 9e-10
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRK--LVNKQDREDIKREIQIMQHLSGQQ---- 155
LG+G FG + K LK K + K +ED+ +E++I + LS +
Sbjct: 3 LGKGNFGEVF-------------KGTLKDKTPVAVKTCKEDLPQELKI-KFLSEARILKQ 48
Query: 156 ----NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NIV+ G RQ +++VMEL GG+ + + E L + ++
Sbjct: 49 YDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL--RKKKDELKTKQLVKFALDAAAGM 106
Query: 212 HFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-----RDIVGSAYY 263
++ +HRDL N L+ + +LK +DFG+S D+G +Y + I +
Sbjct: 107 AYLESKNCIHRDLAARNCLVGENN---VLKISDFGMSRQEDDG-IYSSSGLKQI--PIKW 160
Query: 264 VAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
APE L Y E DVWS G++L+ S GV P+ T + + + KG
Sbjct: 161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 1e-09
Identities = 69/289 (23%), Positives = 111/289 (38%), Gaps = 40/289 (13%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
Q Y + + +G+G G YL + A K I + N ++ RE +I L
Sbjct: 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI- 60
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFD--------KIIAQGHYTEKAAAALCR--- 202
IV D V+ M G L + +++ + + A
Sbjct: 61 HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID------------- 249
I + + H GV+HRDLKP+N LL G ++ D+G ++F
Sbjct: 121 KICATIEYVHSKGVLHRDLKPDNILLG-LFGEVVI--LDWGAAIFKKLEEEDLLDIDVDE 177
Query: 250 EGKVYRD------IVGSAYYVAPEVLRRSYGKE-IDVWSAGVILYILLSGVPPFWAETEK 302
Y IVG+ Y+APE L E D+++ GVILY +L+ P+ + +
Sbjct: 178 RNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237
Query: 303 GIFDAILKGGVDFESE--PWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
I + + E P+ I + K L DP +R +S + L
Sbjct: 238 KI---SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283
|
Length = 932 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 1e-09
Identities = 73/289 (25%), Positives = 117/289 (40%), Gaps = 52/289 (17%)
Query: 97 TLGKELGRGQFG----ITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
TLGK LG G FG + +N S +LK ++D D+ E+++M+ +
Sbjct: 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIG 73
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+NI+ G +++V+E + G L D + A+ E A+ R +
Sbjct: 74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKD 133
Query: 213 FMG----------------VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
+ +HRDL N L++ ++K DFGL+ RD
Sbjct: 134 LVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE---DHVMKIADFGLA---------RD 181
Query: 257 IVGSAYY------------VAPEVL-RRSYGKEIDVWSAGVILY--ILLSGVPPFWAETE 301
I YY +APE L R Y + DVWS GV+L+ L G P E
Sbjct: 182 IHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241
Query: 302 KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
+ +F +LK G + E + L+R + P +R T +++E
Sbjct: 242 E-LFK-LLKEG--YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 2e-09
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 409 MDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA----ADVDGNGTIDYIEFISA 461
+D D G I EEL+ L LG KL++ EV++L++A D DG+G I + EF+ A
Sbjct: 3 LDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 2e-09
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 486 SGYITRDELETAMKDYGIG---DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
G ITR+EL+ A+ GI +E I + E DTD DG+I++EEFC +++
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDI--LFREFDTDGDGKISFEEFCVLLQR 52
|
Length = 53 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 2e-09
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
Q TLG+ +G G+FG TG A K+I + V Q + + + H
Sbjct: 6 QKLTLGEIIGEGEFGAVL--QGEYTGQKVAVKNI--KCDVTAQAFLEETAVMTKLHH--- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+N+V G +++VMEL S G L + + +G +A ++ + + +
Sbjct: 59 -KNLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAEG 112
Query: 214 M------GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY----Y 263
M ++HRDL N L+S +DG A K +DFGL+ +V V ++ +
Sbjct: 113 MEYLESKKLVHRDLAARNILVS-EDGVA--KVSDFGLA------RVGSMGVDNSKLPVKW 163
Query: 264 VAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE L+ + + + DVWS GV+L+ + S G P+ + K + + + KG + EP
Sbjct: 164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG---YRMEPPE 220
Query: 322 LISDSAKDLVRKMLIQDPKKR 342
L+ +PKKR
Sbjct: 221 GCPADVYVLMTSCWETEPKKR 241
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-09
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 382 LKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQL 441
L MA K + + SEEEIK F D D +G I+ EL+ + LG KL++ EV ++
Sbjct: 70 LTLMARK-MKDTDSEEEIK---EAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 442 MDAADVDGNGTIDYIEFISATMHR 465
+ ADVDG+G I+Y EF+ M +
Sbjct: 126 IREADVDGDGQINYEEFVKMMMSK 149
|
Length = 149 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 4e-09
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R L +ELG G FG +L C ++ K + R+D RE +++ +
Sbjct: 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 63
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-------------HYTEKAA 197
L ++IV+F G + + +V E G+L + A G T+
Sbjct: 64 LQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
+ + I + + +HRDL N L+ ++K DFG+S RD+
Sbjct: 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMS---------RDV 170
Query: 258 VGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKG 303
+ YY + PE ++ R + E DVWS GV+L+ I G P++ +
Sbjct: 171 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230
Query: 304 IFDAILKGGV 313
+ + I +G V
Sbjct: 231 VIECITQGRV 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 6e-09
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 28/267 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G G FG G + ++ ++ D D E++++ L NI+
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 162 GAYEDRQSVHLVMELCSGGELFDKI-----------IAQGHYTEKAAAA--LCRAIVNVV 208
GA E+R +++ +E G L D + A+ H T + L + +V
Sbjct: 70 GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129
Query: 209 HHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYY 263
++ +HRDL N L+ K DFGLS E + +G +
Sbjct: 130 TGMQYLSEKQFIHRDLAARNVLVGEN---LASKIADFGLSR--GEEVYVKKTMGRLPVRW 184
Query: 264 VAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321
+A E L S Y + DVWS GV+L+ ++S G P+ T +++ + +G + E
Sbjct: 185 MAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRMEKPR 241
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEV 348
D +L+R+ P +R A++
Sbjct: 242 NCDDEVYELMRQCWRDRPYERPPFAQI 268
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 7e-09
Identities = 24/48 (50%), Positives = 27/48 (56%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFIS 460
+ G IT EELK LA LG LSE EV L D DG+G I + EF
Sbjct: 1 EKGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCV 48
|
Length = 53 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 2e-08
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 30/269 (11%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G G FG G ++ +K D D E++++ L NI+
Sbjct: 15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74
Query: 162 GAYEDRQSVHLVMELCSGGELFDKI-------------IAQGHYTEKAAAALCRAIVNVV 208
GA E R ++L +E G L D + IA + ++ L +V
Sbjct: 75 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134
Query: 209 HHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RDIVGS--AY 262
++ +HRDL N L+ + K DFGLS +VY + +G
Sbjct: 135 RGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLS---RGQEVYVKKTMGRLPVR 188
Query: 263 YVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320
++A E L S Y DVWS GV+L+ ++S G P+ T +++ + +G + E
Sbjct: 189 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKP 245
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVL 349
L D DL+R+ + P +R + A++L
Sbjct: 246 LNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 197 AAALC--RAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
AL + I+ + + H ++HRD+K EN +++ D + D G + F +
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCI---GDLGAAQFPVVAPAF 213
Query: 255 RDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS 291
+ G+ APEVL R Y + D+WSAG++L+ +L+
Sbjct: 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251
|
Length = 357 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P +R Y + L G G ++CT++ G+ K I+K K REI I
Sbjct: 86 PASVVRMQYNILSSLTPGSEGEVFVCTKH--GDEQRKKVIVKAVTGGK----TPGREIDI 139
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
++ +S + I+ AY + +V +VM +LF + G + A + R ++
Sbjct: 140 LKTIS-HRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEA 197
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG----LSVFIDEGKVYRDIVGSAYY 263
+ + H G++HRD+K EN L ++ A+L DFG L D + Y G+
Sbjct: 198 LAYLHGRGIIHRDVKTENIFL-DEPENAVLG--DFGAACKLDAHPDTPQCY-GWSGTLET 253
Query: 264 VAPEVLR-RSYGKEIDVWSAGVILY 287
+PE+L Y + D+WSAG++L+
Sbjct: 254 NSPELLALDPYCAKTDIWSAGLVLF 278
|
Length = 392 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 3e-08
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R+ L K+LG GQFG ++ T N GN+ LK ++ E E QIM+ L
Sbjct: 5 RESLQLIKKLGNGQFGEVWMGTWN--GNTKVAVKTLKPGTMSP---ESFLEEAQIMKKLR 59
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII-AQGHYTE-KAAAALCRAIVNVVHH 210
+V+ A + +++V E S G L D + +G + + + + +
Sbjct: 60 -HDKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY 117
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPE 267
M +HRDL+ N L+ + G + K DFGL+ I++ + Y G+ + + APE
Sbjct: 118 IERMNYIHRDLRSANILVGD---GLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPE 173
Query: 268 VLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
YG+ + DVWS G++L L++ G P+ + + + + +G
Sbjct: 174 AAL--YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG 219
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 4e-08
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
EEE L+ F D D G I+ EL+ L LG +LS+ EV++L+ D DG+G ID
Sbjct: 90 KEEE---LREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEID 146
Query: 455 YIEFISATMH 464
Y EF
Sbjct: 147 YEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R TLGK LG G FG + + +LK +K D D+ E++
Sbjct: 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDK-DLSDLVSEME 69
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL---------------FDKI-IAQG 190
+M+ + +NI+ GA +++++E S G L FD + +
Sbjct: 70 MMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEE 129
Query: 191 HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
T K + + + + +HRDL N L++ + ++K DFGL+ +
Sbjct: 130 QLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN---VMKIADFGLARDVHN 186
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+L+ I G P+
Sbjct: 187 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 4e-08
Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 42/252 (16%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYL-----CTENSTGNSYACKSILKRKLVNKQDREDIK 142
P E I TL +ELG+G FG+ Y + A K++ + + ++R +
Sbjct: 4 PREKI----TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFL 57
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL----------------FDKI 186
E +M+ + ++V G Q +VMEL + G+L
Sbjct: 58 NEASVMKEFN-CHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPP 116
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
Q A A A + HRDL N +++ +K DFG++
Sbjct: 117 TLQKFIQMAAEIADGMAYLAAKKFV------HRDLAARNCMVAEDL---TVKIGDFGMTR 167
Query: 247 FIDEGKVYRDIVGSAYYV---APEVLRRS-YGKEIDVWSAGVILY-ILLSGVPPFWAETE 301
I E YR V APE L+ + + DVWS GV+L+ + P+ +
Sbjct: 168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227
Query: 302 KGIFDAILKGGV 313
+ + ++ GG
Sbjct: 228 EEVLKFVIDGGH 239
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 4e-08
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 49/228 (21%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQ 149
R L +ELG G FG +L C N ++ K D R+D +RE +++
Sbjct: 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLT 63
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAIVN 206
+ +NIV+F G + +V E G+L + + G + + + + ++
Sbjct: 64 NF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122
Query: 207 VVHHC--------------HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
+ HF+ HRDL N L+ ++K DFG+S
Sbjct: 123 QLLQIAVQIASGMVYLASQHFV---HRDLATRNCLVGYD---LVVKIGDFGMS------- 169
Query: 253 VYRDIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY 287
RD+ + YY + PE ++ R + E DVWS GV+L+
Sbjct: 170 --RDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 5e-08
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 443 DAADVDGNGTIDYIEFISA----TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAM 498
D DG+G ID E + E +E + F DKD G I+ +E AM
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 5e-08
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 50/206 (24%)
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG-AMLKATDFGLS-VFIDEGKVYRD 256
+L I++ +H+ H V+HRDLKP N L+ + +K D G + +F K D
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171
Query: 257 ---IVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE---------- 301
+V + +Y APE+L R Y K ID+W+ G I LL+ P F E
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 231
Query: 302 ---KGIFDAI-LKGGVDFES-----EPWLLISDSAKD----------------------- 329
IF+ + D+E E L+ D ++
Sbjct: 232 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF 291
Query: 330 -LVRKMLIQDPKKRITSAEVLEHPWM 354
L++K+L DP KRITS + ++ P+
Sbjct: 292 HLLQKLLTMDPIKRITSEQAMQDPYF 317
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 8e-08
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 73
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + +
Sbjct: 74 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ ++
Sbjct: 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDVNNI 190
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 191 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 8e-08
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENS-------TGNSYACKSILK-----RKLVNKQDRED 140
RQ L ++LG GQFG +LC + + +L R V K R D
Sbjct: 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARND 63
Query: 141 IKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA- 199
+EI+IM L NI+ G + ++ E G+L ++ ++Q A
Sbjct: 64 FLKEIKIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDL-NQFLSQREIESTFTHAN 121
Query: 200 --LCRAIVNVVH----------HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247
+I N+++ + + +HRDL N L+ N +K DFG+S
Sbjct: 122 NIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH---YTIKIADFGMSRN 178
Query: 248 IDEGKVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS 291
+ G YR I G A ++A E +L + DVW+ GV L+ + +
Sbjct: 179 LYSGDYYR-IQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 9e-08
Identities = 71/298 (23%), Positives = 119/298 (39%), Gaps = 56/298 (18%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQ 155
++LG G + Y G S ++ K++ Q+ E RE +++ L
Sbjct: 11 EKLGEGSYATVY------KGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK-HA 63
Query: 156 NIVEFRGAYEDRQSVHLVME-----LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
NIV ++++ LV E LC + DK G + ++ + +
Sbjct: 64 NIVLLHDIIHTKETLTLVFEYVHTDLC---QYMDK--HPGGLHPENVKLFLFQLLRGLSY 118
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL 269
H ++HRDLKP+N L+S+ LK DFGL+ Y + V + +Y P+VL
Sbjct: 119 IHQRYILHRDLKPQNLLISDT---GELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVL 175
Query: 270 RRS--YGKEIDVWSAGVILYILLSGVPPFWAETE-----KGIFDAILKGGVD-------- 314
S Y +D+W G I ++ GV F + + IF + D
Sbjct: 176 LGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235
Query: 315 --FESEPWLLIS--------------DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
F+ E + L S + A+DL K+L PK R+++ L H + +
Sbjct: 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG-AMLKATDFGLS-VFIDEGKVYRD 256
+L I++ +H+ H V+HRDLKP N L+ + +K D G + +F K D
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171
Query: 257 ---IVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVP-------------PFWA 298
+V + +Y APE+L R Y K ID+W+ G I LL+ P PF
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHH 231
Query: 299 ETEKGIFDAI-LKGGVDFE------SEPWL-------------LISDSAKD--------- 329
+ IF + D+E P L LI K
Sbjct: 232 DQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVF 291
Query: 330 -LVRKMLIQDPKKRITSAEVLEHPWM 354
L++K+L DP KRITS + L+ P+
Sbjct: 292 LLLQKLLTMDPTKRITSEQALQDPYF 317
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 100 KELGRGQFGIT---YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
ELG G FG + S + A K ILK + ++++ RE +MQ L
Sbjct: 1 GELGSGNFGTVKKGMYKMKKSE-KTVAVK-ILKNDNNDPALKDELLREANVMQQLDNPY- 57
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGV 216
IV G E +S LVMEL G L + H TEK L + + +
Sbjct: 58 IVRMIGICEA-ESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY----VAPEVLR-R 271
+HRDL N LL + K +DFGLS + + Y + APE +
Sbjct: 117 VHRDLAARNVLLVTQH---YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173
Query: 272 SYGKEIDVWSAGVILYILLS-GVPPF 296
+ + DVWS GV+++ S G P+
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-07
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR---EDIKREIQIMQHLSG 153
T+ +LG GQ+G Y + A K++ K+D E+ +E +M+ +
Sbjct: 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-------KEDTMEVEEFLKEAAVMKEIK- 60
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA--IVNVVHHC 211
N+V+ G +++ E + G L D + A L A I + + +
Sbjct: 61 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 120
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEV 268
+HRDL N L+ ++K DFGLS + G Y G+ + + APE
Sbjct: 121 EKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPES 176
Query: 269 LR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
L + + DVW+ GV+L+ I G+ P+
Sbjct: 177 LAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQIMQ 149
R+ L ++LG GQFG ++ T N T A K++ K E +E QIM+
Sbjct: 5 RESLKLERKLGAGQFGEVWMGTWNGTTK-VAVKTL-------KPGTMSPEAFLQEAQIMK 56
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-------------------IAQG 190
L +V+ + + +++V E S G L D + IA+G
Sbjct: 57 KLR-HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEG 115
Query: 191 -HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
Y E +HRDL N L+ + K DFGL+ I
Sbjct: 116 MAYLES------------------RNYIHRDLAARNILVGE---NLVCKIADFGLARLI- 153
Query: 250 EGKVYRDIVGSAY---YVAPEVLRRSYGK---EIDVWSAGVILY 287
E Y G+ + + APE YG+ + DVWS G++L
Sbjct: 154 EDDEYTAREGAKFPIKWTAPEAAN--YGRFTIKSDVWSFGILLT 195
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 135 KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE 194
K R+++ RE +IM L IV G E +++ LVME+ SGG L +
Sbjct: 36 KSVRDEMMREAEIMHQLD-NPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSG------ 87
Query: 195 KAAAALCRAIVNVVHHCHFMGV--------MHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
K +V ++H MG+ +HRDL N LL N+ K +DFGLS
Sbjct: 88 KKDEITVSNVVELMHQVS-MGMKYLEGKNFVHRDLAARNVLLVNQH---YAKISDFGLSK 143
Query: 247 FID-EGKVYRDIVGSAY---YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPF 296
+ + Y+ + + APE + R + DVWS G+ ++ S G P+
Sbjct: 144 ALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF---IDEGKVYR 255
A+ R+++ + + H ++HRD+K EN + N G L DFG + F I+ K Y
Sbjct: 186 AIERSVLRAIQYLHENRIIHRDIKAENIFI-NHPGDVCLG--DFGAACFPVDINANKYY- 241
Query: 256 DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSG 292
G+ APE+L R YG +D+WSAG++L+ + +
Sbjct: 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279
|
Length = 391 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
L + +G+G+FG L + GN A K I N + E +M L N
Sbjct: 9 KLLQTIGKGEFGDVML--GDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQLR-HSN 60
Query: 157 IVEFRGA-YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM- 214
+V+ G E++ +++V E + G L D + ++G + L + ++V ++
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE 119
Query: 215 --GVMHRDLKPENFLLSNKDGGAMLKATDFGL----SVFIDEGKVYRDIVGSAYYVAPEV 268
+HRDL N L+S + + K +DFGL S D GK+ + APE
Sbjct: 120 ANNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGKL------PVKWTAPEA 170
Query: 269 LR-RSYGKEIDVWSAGVILYILLS 291
LR + + + DVWS G++L+ + S
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
L + T ++ K + K +++ I N+V SV
Sbjct: 11 LVMDTRTQQTFILKGLRKSSEYSRERLTIIPH---------CVPNMVCLHKYIVSEDSVF 61
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
LV++ GG+L+ I + E+ +V + H G++ RDL P N LL
Sbjct: 62 LVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL--- 118
Query: 232 DGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKE-IDVWSAGVILYILL 290
D ++ T F +++ + V Y APEV S E D WS G IL+ LL
Sbjct: 119 DDRGHIQLTYFSRWSEVED-SCDGEAV-ENMYCAPEVGGISEETEACDWWSLGAILFELL 176
Query: 291 SG 292
+G
Sbjct: 177 TG 178
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID---EGKVY 254
A+ R +++ + + H G++HRD+K EN L++ + + DFG + F +
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICL---GDFGAACFARGSWSTPFH 319
Query: 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILY 287
I G+ APEVL Y +D+WSAG++++
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 45.8 bits (110), Expect = 4e-07
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+KE D D DG+I++EEF ++++
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 6e-07
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R L ++LG GQFG + N+T A K+ LK D +D E QIM+ L
Sbjct: 5 RTSIQLLRKLGAGQFGEVWEGLWNNT-TPVAVKT-LK---PGTMDPKDFLAEAQIMKKLR 59
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFD--KIIAQGHYTEKAAAALCRAIVNVVHH 210
+++ + +++V EL G L + + A + + + + +
Sbjct: 60 -HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAY 118
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPE 267
+HRDL N L+ + K DFGL+ I E +Y G+ + + APE
Sbjct: 119 LEAQNYIHRDLAARNVLVGE---NNICKVADFGLARVIKE-DIYEAREGAKFPIKWTAPE 174
Query: 268 VLRRS-YGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKG 311
+ + + DVWS G++L I+ G P+ T + + +G
Sbjct: 175 AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG 220
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 8e-07
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG + E + +LK K D D+ E++
Sbjct: 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK-DLSDLISEME 75
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ E+
Sbjct: 76 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEE 135
Query: 196 --AAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
+ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 136 QLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 192
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+L+ I G P+
Sbjct: 193 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.5 bits (120), Expect = 8e-07
Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 28/267 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G G FG G ++ +K D D E++++ L NI+
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 162 GAYEDRQSVHLVMELCSGGELFDKI-----------IAQGHYTEKAAAA--LCRAIVNVV 208
GA E R ++L +E G L D + A + T ++ L +V
Sbjct: 63 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122
Query: 209 HHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYY 263
++ +HRDL N L+ K DFGLS + + +G +
Sbjct: 123 RGMDYLSQKQFIHRDLAARNILVGENYVA---KIADFGLSR--GQEVYVKKTMGRLPVRW 177
Query: 264 VAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321
+A E L S Y DVWS GV+L+ ++S G P+ T +++ + +G + E L
Sbjct: 178 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPL 234
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEV 348
D DL+R+ + P +R + A++
Sbjct: 235 NCDDEVYDLMRQCWREKPYERPSFAQI 261
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 44.7 bits (107), Expect = 9e-07
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+KE E D D DG+I++EEF +++
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 1e-06
Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 45/238 (18%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENS--------------TGNSYACKSILKRKLVNKQDR 138
R ++LG GQFG +LC + G + R NK R
Sbjct: 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR 63
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA- 197
D +E++I+ L NI+ G D + ++ E G+L ++ ++ H +K
Sbjct: 64 NDFLKEVKILSRLK-DPNIIRLLGVCVDEDPLCMITEYMENGDL-NQFLSSHHLDDKEEN 121
Query: 198 ----------------AALCRAIVNVVHHCHFMGVM---HRDLKPENFLLSNKDGGAMLK 238
++L + + ++ + HRDL N L+ +K
Sbjct: 122 GNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVG---ENLTIK 178
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS 291
DFG+S + G YR I G A ++A E +L + DVW+ GV L+ +L
Sbjct: 179 IADFGMSRNLYAGDYYR-IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-06
Identities = 73/301 (24%), Positives = 110/301 (36%), Gaps = 52/301 (17%)
Query: 19 RSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPV 78
S SH+ Q + V PP P K T P
Sbjct: 66 TDSGRTKSHEGAATTKQAT-----TTPTTNVEVAPP------------PKKKKVTYALPN 108
Query: 79 QKPE-----TVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV 133
Q E VLG+ ++ Q + + LG G FG + A K + + V
Sbjct: 109 QSREEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIV---RNV 165
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFR------GAYEDRQSVHLVMELCSGGE-LFDKI 186
K R D K EIQ M+ + +Q R Y ++ H+ + + G L D I
Sbjct: 166 PKYTR-DAKIEIQFMEKV--RQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWI 222
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGG----------- 234
+ G ++ + A + + + H + +MH DLKPEN L+ D
Sbjct: 223 MKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282
Query: 235 --AMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLS 291
++ D G DE IV + +Y +PEV L + D+WS G I+Y L +
Sbjct: 283 DPCRVRICDLGGCC--DERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYT 340
Query: 292 G 292
G
Sbjct: 341 G 341
|
Length = 467 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-06
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464
+F ++D D G I+ +E + L + S L + + Q+ D AD D +G +D EF A MH
Sbjct: 4 IFRSLDPDGDGLISGDEARPFLGK--SGLPRSVLAQIWDLADTDKDGKLDKEEFAIA-MH 60
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 29/232 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNS--YACKSILKRKLVNKQDREDIKREIQIMQH 150
R+ +TL ++LG G FG + E N A K ILK + KQ D ++E+Q ++
Sbjct: 5 REEFTLERKLGSGYFGEVW---EGLWKNRVRVAIK-ILKSDDLLKQQ--DFQKEVQALKR 58
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELF-------DKIIAQGHYTEKAAAALCRA 203
L + I F V+++ EL G L +++ + A
Sbjct: 59 LRHKHLISLFAVCSVGE-PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQ----- 112
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY--RDIVGSA 261
+ + + +HRDL N L+ + K DFGL+ I E VY D
Sbjct: 113 VAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKE-DVYLSSDKKIPY 168
Query: 262 YYVAPEVL-RRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ APE ++ + DVWS G++LY + + G P+ ++D I G
Sbjct: 169 KWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG 220
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (120), Expect = 1e-06
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 195 KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
K A+ + ++ V + H ++HRD+K EN L N DG +L DFG ++ ++ +
Sbjct: 267 KQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL-NCDGKIVLG--DFGTAMPFEKEREA 323
Query: 255 RDI--VGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLS 291
D VG+ +PE+L Y + D+WS G+IL +LS
Sbjct: 324 FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 380 NKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-LGSKLSETEV 438
N+L K+ L+ + SE EI +F +D T+ + E T ++ L E E+
Sbjct: 40 NELGKI-LRSLGFNPSEAEIN---KLFEEIDAGN-ETVDFPEFLTVMSVKLKRGDKEEEL 94
Query: 439 KQLMDAADVDGNGTIDYIEFI-SATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
++ D D +G I E RL DE + K + +D+D G I +E +
Sbjct: 95 REAFKLFDKDHDGYISIGELRRVLKSLGERL-SDEEVEKLLKEYDEDGDGEIDYEEFKKL 153
Query: 498 MKDYGI 503
+KD
Sbjct: 154 IKDSPT 159
|
Length = 160 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-06
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ F+ D D G I+ DE + G+ + + +I DTD DG+++ EEF M
Sbjct: 3 QIFRSLDPDGDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 31/231 (13%)
Query: 93 RQFYTLGKELGRGQFGITY------LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG + +LK +K D D+ E++
Sbjct: 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK-DLADLISEME 69
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL---------------FDKI-IAQG 190
+M+ + +NI+ G +++++E + G L FD + +
Sbjct: 70 LMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEE 129
Query: 191 HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
+ K + + + + +HRDL N L++ + ++K DFGL+ + +
Sbjct: 130 QLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN---VMKIADFGLARGVHD 186
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS G++++ I G P+
Sbjct: 187 IDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P E +R L +LG+G FG ++ T N T K +K E +E QI
Sbjct: 4 PRESLR----LDVKLGQGCFGEVWMGTWNGT-----TKVAIKTLKPGTMMPEAFLQEAQI 54
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAI 204
M+ L + + + A + +++V E G L D + +G + + I
Sbjct: 55 MKKLRHDKLVPLY--AVVSEEPIYIVTEFMGKGSLLD-FLKEGDGKYLKLPQLVDMAAQI 111
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY-- 262
+ + + M +HRDL+ N L+ + + K DFGL+ I++ + Y G+ +
Sbjct: 112 ADGMAYIERMNYIHRDLRAANILVGDN---LVCKIADFGLARLIEDNE-YTARQGAKFPI 167
Query: 263 -YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ APE L + + DVWS G++L L++ G P+ + + + + +G
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG 219
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 24/215 (11%)
Query: 100 KELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
LGRG+FG +L E K++ K K N Q + +RE+ + + LS
Sbjct: 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQ--SEFRRELDMFRKLS-H 67
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGEL--FDKIIAQGHYTEK-------AAAALCRAIV 205
+N+V G + + ++++E G+L F + K ALC I
Sbjct: 68 KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIA 127
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYRDIVGSAYY 263
+ H +HRDL N L+S++ +K + LS V+ E R+ + +
Sbjct: 128 LGMDHLSNARFVHRDLAARNCLVSSQR---EVKVSLLSLSKDVYNSEYYKLRNALIPLRW 184
Query: 264 VAPEVLRRS-YGKEIDVWSAGVILY-ILLSGVPPF 296
+APE ++ + + DVWS GV+++ + G PF
Sbjct: 185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPF 219
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 3e-06
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 17/226 (7%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R+ L K+LG GQFG ++ N++ A K+ LK ++ Q + ++ +QH
Sbjct: 5 RESIKLVKKLGAGQFGEVWMGYYNNS-TKVAVKT-LKPGTMSVQAFLEEANLMKTLQH-- 60
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHH 210
+V + ++++ E + G L D + + G I + +
Sbjct: 61 --DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY 118
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPE 267
+HRDL+ N L+S M K DFGL+ I++ + Y G+ + + APE
Sbjct: 119 IERKNYIHRDLRAANVLVSES---LMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 174
Query: 268 VLRR-SYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKG 311
+ S+ + DVWS G++LY I+ G P+ + + A+ +G
Sbjct: 175 AINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG 220
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 4e-06
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYR-DIVGSAYYVAPE-VLRRS 272
+HRDL N LLS + ++K DFGL+ ++ D V + D ++APE + R
Sbjct: 201 IHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 257
Query: 273 YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + DVWS GV+L+ + S G P+ F LK G + + + ++
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY-----TTPEMY 312
Query: 332 RKMLI---QDPKKRITSAEVLEH 351
+ ML +P +R T +E++EH
Sbjct: 313 QTMLDCWHGEPSQRPTFSELVEH 335
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P E +R L +LG+G FG ++ T N T + +K E +E Q+
Sbjct: 4 PRESLR----LEVKLGQGCFGEVWMGTWNGT-----TRVAIKTLKPGTMSPEAFLQEAQV 54
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE----KAAAALCRA 203
M+ L ++ + + A + +++V E S G L D + +G + +
Sbjct: 55 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQ 110
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY- 262
I + + + M +HRDL+ N L+ + K DFGL+ I++ + Y G+ +
Sbjct: 111 IASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNE-YTARQGAKFP 166
Query: 263 --YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ APE L + + DVWS G++L L + G P+ + + D + +G
Sbjct: 167 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 219
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 4e-06
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 26/266 (9%)
Query: 96 YTLGKELGRGQFGI---TYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
+TLG+ LG+G+FG L +E+ + A K +LK + + D E+ RE M+
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVK-MLKADIFSSSDIEEFLREAACMKEFD 59
Query: 153 GQQNI----VEFRGAYEDRQSVHLV-MELCSGGELFDKIIAQGHYTEK---AAAALCRAI 204
I V R + R + +V + G+L ++ E L R +
Sbjct: 60 HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM 119
Query: 205 VNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
+++ ++ +HRDL N +L + + DFGLS I G YR S
Sbjct: 120 IDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQGCASK 176
Query: 262 Y---YVAPEVLRRS-YGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKGGVDFE 316
++A E L + Y DVW+ GV ++ I+ G P+ I++ ++KG +
Sbjct: 177 LPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RLK 235
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKR 342
P L + +L+ + +PK R
Sbjct: 236 QPPDCL--EDVYELMCQCWSPEPKCR 259
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-06
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYG 502
L +AF+ FDKD GYI+ +EL A++ G
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 8e-06
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 13/141 (9%)
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYR--DIVGSAYYVAPEVL 269
M ++HRDL N L++ G +K +DFGLS V+ ++ V R + ++A E L
Sbjct: 146 MKLVHRDLAARNVLVAE---GRKMKISDFGLSRDVYEEDSYVKRSKGRI-PVKWMAIESL 201
Query: 270 -RRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
Y + DVWS GV+L+ +++ G P+ + +F+ +LK G E S+
Sbjct: 202 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN-LLKTGYRMERPE--NCSEEM 258
Query: 328 KDLVRKMLIQDPKKRITSAEV 348
+L+ Q+P KR T A++
Sbjct: 259 YNLMLTCWKQEPDKRPTFADI 279
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 8e-06
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 32/247 (12%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK--RKLVNKQDREDIKREI 145
PL +R +ELG FG Y G +A +K + + N Q + ++E
Sbjct: 3 PLSAVR----FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEA 58
Query: 146 QIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+M L NIV G Q V ++ E + G+L + +I + +++ ++ V
Sbjct: 59 SLMAELH-HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTV 117
Query: 206 -NVVHHCHFMGV----------------MHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
+ + H F+ + +H+DL N L+ + +K +D GLS I
Sbjct: 118 KSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ---LHVKISDLGLSREI 174
Query: 249 DEGKVYR---DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
YR + ++ PE ++ + + D+WS GV+L+ + S G+ P++ + +
Sbjct: 175 YSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE 234
Query: 304 IFDAILK 310
+ + + K
Sbjct: 235 VIEMVRK 241
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 169 SVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227
+V LV +L G L D + + + C I + + + ++HRDL N L
Sbjct: 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVL 141
Query: 228 LSNKDGGAMLKATDFGLSVF--IDEGKVYRD--IVGSAYYVAPEVLRRSYGKEIDVWSAG 283
+ + + +K TDFGL+ IDE + + D V + +L R + + DVWS G
Sbjct: 142 VKSPN---HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYG 198
Query: 284 VILYILLS-GVPPFWAETEKGIFDAILKG 311
V ++ L++ G P+ + I D + KG
Sbjct: 199 VTVWELMTFGAKPYDGIPAREIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 2e-05
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 384 KMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLA 427
K ALK + E LSEEEI M +D D G I +EE +A
Sbjct: 23 KAALKSLGEGLSEEEID---EMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 2e-05
Identities = 51/244 (20%), Positives = 103/244 (42%), Gaps = 50/244 (20%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD---REDIKREIQIMQHLSGQQN 156
+ELG +FG Y T +++ + L +K + RE+ K E + L N
Sbjct: 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ-HPN 69
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG- 215
IV G Q + ++ CS +L + ++ + +++ + + + + + F+
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 216 ---------------VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
V+H+DL N L+ +K L+V I + ++R++ +
Sbjct: 130 VTQIAAGMEFLSSHHVVHKDLATRNVLVFDK------------LNVKISDLGLFREVYAA 177
Query: 261 AYY------------VAPEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGI 304
YY ++PE + YGK + D+WS GV+L+ + S G+ P+ + + +
Sbjct: 178 DYYKLMGNSLLPIRWMSPEAI--MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 235
Query: 305 FDAI 308
+ I
Sbjct: 236 IEMI 239
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 93 RQFYTLGKELGRGQFGITYLC-------------TENSTGNS---YACKSILKRKLVNKQ 136
R+ T ++LG GQFG +LC + + +GN A K + R+ NK
Sbjct: 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKML--REDANKN 61
Query: 137 DREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
R D +EI+IM L NI+ + ++ E G+L ++ +++ E A
Sbjct: 62 ARNDFLKEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDL-NQFLSRHEPQEAA 119
Query: 197 AAA------------LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244
A + I + + + + +HRDL N L+ +K DFG+
Sbjct: 120 EKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN---YTIKIADFGM 176
Query: 245 SVFIDEGKVYRDIVGSAYYVAP-------EVLRRSYGKEIDVWSAGVILYILLS 291
S + G YR I G A V P +L + DVW+ GV L+ +L+
Sbjct: 177 SRNLYSGDYYR-IQGRA--VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF-RGAYEDRQSVHLVMELCSGGELFDK 185
+LK +++ D +RE+ I+Q L+ + V + E +L+ME G L +
Sbjct: 25 VLKIN-PSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV 83
Query: 186 IIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244
+ E+ A L + +H + + H DL P N L+ + ++ D+
Sbjct: 84 SEEEKEDIAEQLAELLAK-----LHQLPLLVLCHGDLHPGNILVDDGKILGII---DWEY 135
Query: 245 SVFIDE 250
+ +
Sbjct: 136 AGYGPP 141
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 39/231 (16%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENST---------GNSYACKSIL-----KRKLVNKQDR 138
RQ ++LG GQFG +LC + N A +L R + R
Sbjct: 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAR 63
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL---------FDKIIAQ 189
ED +E++I+ LS NI G + ++ME G+L +A
Sbjct: 64 EDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122
Query: 190 GHYTEKAAAAL--CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247
+ + L I + + + + +HRDL N L+ +K DFG+S
Sbjct: 123 NSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK---NYTIKIADFGMSRN 179
Query: 248 IDEGKVYRDIVGSAYYVAP-------EVLRRSYGKEIDVWSAGVILYILLS 291
+ YR + G A P VL + + DVW+ GV L+ +L+
Sbjct: 180 LYSSDYYR-VQGRA--PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 24/146 (16%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYRDIVGSAY----YVAPE-VL 269
+HRDL N LLS + ++K DFGL+ ++ D V + GSA ++APE +
Sbjct: 196 IHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRK---GSARLPLKWMAPESIF 249
Query: 270 RRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
+ Y + DVWS GV+L+ + S G P+ F LK G + ++A
Sbjct: 250 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA------PENAT 303
Query: 329 DLVRKMLIQ----DPKKRITSAEVLE 350
+ ++++ DPK+R T + ++E
Sbjct: 304 PEIYRIMLACWQGDPKERPTFSALVE 329
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 26/94 (27%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------ 264
+HRDL N LLS + ++K DFGL+ RDI YV
Sbjct: 195 IHRDLAARNILLSENN---VVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWM 242
Query: 265 APE-VLRRSYGKEIDVWSAGVILYILLS-GVPPF 296
APE + + Y + DVWS GV+L+ + S G P+
Sbjct: 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 276
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-05
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 478 FQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR--- 534
F+ DK+ G +T + + + G+ + +I + D DNDG ++ +EF M
Sbjct: 16 FRSLDKNQDGTVTGAQAKPILLKSGLPQTL-LAKIWNLADIDNDGELDKDEFALAMHLIY 74
Query: 535 ---SGTPQPAKL 543
+G P PA L
Sbjct: 75 RKLNGYPIPASL 86
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 39.7 bits (94), Expect = 6e-05
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARL 429
LK F D D G I++EE K L +L
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 6e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A+S E+ + +F ++D ++ GT+T + K L + S L +T + ++ + AD+D +G
Sbjct: 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK--SGLPQTLLAKIWNLADIDNDGE 60
Query: 453 IDYIEFISATMH 464
+D EF A MH
Sbjct: 61 LDKDEFALA-MH 71
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 6e-05
Identities = 60/280 (21%), Positives = 122/280 (43%), Gaps = 29/280 (10%)
Query: 90 EDIRQFYTLGKELGRGQFGITYL-----CTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
E R+ T+ +ELG+G FG+ Y ++ A K++ + + ++R + E
Sbjct: 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNE 59
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA----------QGHYTE 194
+M+ + ++V G Q ++MEL + G+L + + Q +
Sbjct: 60 ASVMKEFNC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSL 118
Query: 195 KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
K + I + + + + +HRDL N +++ +K DFG++ I E Y
Sbjct: 119 KKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYY 175
Query: 255 R---DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAIL 309
R + +++PE L+ + DVWS GV+L+ I P+ + + + ++
Sbjct: 176 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM 235
Query: 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
+GG+ + + D +L+R +PK R + E++
Sbjct: 236 EGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEII 272
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 8e-05
Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 24/167 (14%)
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
E+ A+C + + H +L DG +LK G F +
Sbjct: 16 EEEIWAVCLQCLGALRELH-------RQAKSGNILLTWDG--LLKL--DGSVAFKTPEQ- 63
Query: 254 YRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKG 311
Y++APEV+ +SY ++ D++S G+ LY L P+ E E I + +L G
Sbjct: 64 --SRPDP-YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG 120
Query: 312 ------GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
E + S +D +R + P++R + L H
Sbjct: 121 MPADDPRDRSNLEGVSA-ARSFEDFMRLCASRLPQRREAANHYLAHC 166
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 8e-05
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE--------- 267
+HRDL N L+ ++K DFGLS R+I + YY A E
Sbjct: 152 VHRDLATRNCLVG---ENMVVKIADFGLS---------RNIYSADYYKASENDAIPIRWM 199
Query: 268 ----VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313
+ Y E DVW+ GV+L+ + S G+ P++ + + + G V
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNV 250
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 9e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKD 500
L +AF+ FDKD G I+ +E + +K
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 21/226 (9%)
Query: 99 GKELGRGQFGITY--LCTENSTGNSY--ACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
K LG G FG Y + A K + + + + ++I E +M +
Sbjct: 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASV-DH 68
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL---CRAIVNVVHHC 211
++V G Q V L+ +L G L D + + H + L C I + +
Sbjct: 69 PHVVRLLGICLSSQ-VQLITQLMPLGCLLDYV--RNHKDNIGSQYLLNWCVQIAKGMSYL 125
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYRDIVGSA--YYVAPE- 267
++HRDL N L+ +K TDFGL+ +D K Y G ++A E
Sbjct: 126 EEKRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALES 182
Query: 268 VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+L R Y + DVWS GV ++ L++ G P+ I D + KG
Sbjct: 183 ILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE 228
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R+ L K+LG GQFG ++ T N K +K E E +M+ L
Sbjct: 5 RESLKLEKKLGAGQFGEVWMATYNK-----HTKVAVKTMKPGSMSVEAFLAEANVMKTL- 58
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL--CRAIVNVVHH 210
Q + + A ++ ++++ E + G L D + + + + I +
Sbjct: 59 -QHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 117
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAML--KATDFGLSVFIDEGKVYRDIVGSAY---YVA 265
+HRDL+ N L+S A L K DFGL+ I++ + Y G+ + + A
Sbjct: 118 IEQRNYIHRDLRAANILVS-----ASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTA 171
Query: 266 PEVLRR-SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
PE + S+ + DVWS G++L +++ G P+ + + A+ +G
Sbjct: 172 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 219
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|238131 cd00213, S-100, S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/62 (20%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 479 QYFDKD-NSGYITRDEL----ETAMKDY--GIGDEASIKEIISEVDTDNDGRINYEEFCT 531
+Y K+ + +++ EL ET + ++ D ++ +I+ ++D + DG+++++EF
Sbjct: 16 KYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLV 75
Query: 532 MM 533
++
Sbjct: 76 LI 77
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents the interaction site of S100 proteins with their target proteins. There is experimental evidence showing that many S100 proteins have multiple binding partners with diverse mode of interaction with different targets. In addition to S100 proteins (such as S100A1,-3,-4,-6,-7,-10,-11,and -13), this group includes the ''fused'' gene family, a group of calcium binding S100-related proteins. The ''fused'' gene family includes multifunctional epidermal differentiation proteins - profilaggrin, trichohyalin, repetin, hornerin, and cornulin; functionally these proteins are associated with keratin intermediate filaments and partially crosslinked to the cell envelope. These ''fused'' gene proteins contain N-terminal sequence with two Ca-binding EF-hands motif, which may be associated with calcium signaling in epidermal cells and autoprocessing in a calcium-dependent manner. In contrast to S100 proteins, "fused" gene family proteins contain an extraordinary high number of almost perfect peptide repeats with regular array of polar and charged residues similar to many known cell envelope proteins. Length = 88 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R LG+ LG G FG T + +S + + + L +++ + E++IM
Sbjct: 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMS 95
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-----YTEKA 196
HL NIV GA ++++ E C G+L D + H Y +K
Sbjct: 96 HLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKN 147
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------ 264
+HRDL N LL++ G + K DFGL+ RDI + YV
Sbjct: 236 IHRDLAARNILLTH---GRITKICDFGLA---------RDIRNDSNYVVKGNARLPVKWM 283
Query: 265 APE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
APE + Y E DVWS G++L+ + S G P+ F ++K G S P
Sbjct: 284 APESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS-PECA 342
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350
S+ D+++ DP KR T ++++
Sbjct: 343 PSE-MYDIMKSCWDADPLKRPTFKQIVQ 369
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 49/297 (16%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR--------KLVNK----QDRED 140
R+ TL +ELG+G FG+ Y GN+ + I+K K VN+ ++R +
Sbjct: 5 REKITLLRELGQGSFGMVY------EGNA---RDIIKGEAETRVAVKTVNESASLRERIE 55
Query: 141 IKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE------ 194
E +M+ + ++V G Q +VMEL + G+L + + E
Sbjct: 56 FLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 114
Query: 195 ----KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
+ + I + + + + +HRDL N ++++ +K DFG++ I E
Sbjct: 115 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF---TVKIGDFGMTRDIYE 171
Query: 251 GKVYRDI---VGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
YR + ++APE L+ + D+WS GV+L+ + S P+ + + +
Sbjct: 172 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE------HPWMRE 356
++ GG + + + DL+R +PK R T E++ HP E
Sbjct: 232 KFVMDGGYLDQPDN---CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 37.4 bits (88), Expect = 5e-04
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARL 429
LK F D D G I +EE K L L
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRD--IVGSAYYVAPEVLRR 271
++HRDL N L+ +K TDFGL+ + DE + + + V + +L R
Sbjct: 130 LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR 186
Query: 272 SYGKEIDVWSAGVILYILLS-GVPPF 296
Y + DVWS GV ++ L++ G P+
Sbjct: 187 IYTHQSDVWSYGVTVWELMTFGSKPY 212
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 7e-04
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
GK LG G FG T G + + L + +RE + E++I+ HL
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH 101
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFD 184
+NIV GA V ++ E C G+L +
Sbjct: 102 KNIVNLLGACTHGGPVLVITEYCCYGDLLN 131
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 8e-04
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLG 430
L+ F D D G I+ EEL+ L LG
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 9e-04
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 384 KMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL 429
K AL ++ +LSEEE+ +F DTD G I++EE L RL
Sbjct: 11 KRALALLGISLSEEEVD---ILFREFDTDGDGKISFEEFCVLLQRL 53
|
Length = 53 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 35.8 bits (84), Expect = 0.001
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 476 KAFQYFDKDNSGYITRDELETAMK 499
+AF+ FDKD G I +E + +K
Sbjct: 4 EAFRLFDKDGDGKIDFEEFKDLLK 27
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.5 bits (83), Expect = 0.002
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 437 EVKQLMDAADVDGNGTIDYIEFISATMH 464
E+K+ D DG+G I + EF
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 26/94 (27%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------ 264
+HRD+ N LL++ G + K DFGL+ RDI+ + YV
Sbjct: 234 IHRDVAARNVLLTD---GRVAKICDFGLA---------RDIMNDSNYVVKGNARLPVKWM 281
Query: 265 APE-VLRRSYGKEIDVWSAGVILYILLS-GVPPF 296
APE + Y + DVWS G++L+ + S G P+
Sbjct: 282 APESIFDCVYTVQSDVWSYGILLWEIFSLGKSPY 315
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 28/275 (10%)
Query: 97 TLGKELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
LGK LG G+FG L ++ + A K++ K + + E+ E M+
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD- 59
Query: 154 QQNIVEFRGA---YEDRQSVH---LVMELCSGGELFDKIIAQ--GHYTEK-AAAALCRAI 204
N+++ G Q + +++ G+L ++ G EK L + +
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM 119
Query: 205 VNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
V++ ++ +HRDL N +L + DFGLS I G YR +
Sbjct: 120 VDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADFGLSKKIYSGDYYRQGRIAK 176
Query: 262 Y---YVAPEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKGGVDFE 316
++A E L R Y + DVW+ GV ++ I G P+ I+D L+ G +
Sbjct: 177 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYD-YLRHGNRLK 235
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
L D DL+ DPK R T ++ E
Sbjct: 236 QPEDCL--DELYDLMYSCWRADPKDRPTFTKLREV 268
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 169 SVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227
S+ LV +L G L D + + + C I +++ ++HR+L N L
Sbjct: 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNIL 141
Query: 228 LSNKDGGAMLKATDFGLSVFI---DEGKVYRDIVGSAYYVAPE-VLRRSYGKEIDVWSAG 283
L + ++++ DFG++ + D+ Y + ++A E +L Y + DVWS G
Sbjct: 142 LKSD---SIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYG 198
Query: 284 VILYILLS-GVPPFWAETEKGIFDAILKG 311
V ++ ++S G P+ + D + KG
Sbjct: 199 VTVWEMMSYGAEPYAGMRPHEVPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 28/96 (29%)
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY------------- 263
+HRDL N +L D +K DFGL+ RDI YY
Sbjct: 120 VHRDLAARNCML---DESFTVKVADFGLA---------RDIYDKEYYSVHNHTGAKLPVK 167
Query: 264 -VAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPF 296
+A E L+ + + + DVWS GV+L+ L++ G PP+
Sbjct: 168 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 54/224 (24%), Positives = 89/224 (39%), Gaps = 41/224 (18%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK--QDREDIKREIQIMQHLSGQQNI 157
KE+G G FG L NS + ++K V+ Q++ E Q + L N+
Sbjct: 1 KEIGNGWFGKVILGEVNSGYTP--AQVVVKELRVSASVQEQMKFLEEAQPYRSLQ-HSNL 57
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA---------IVNVV 208
++ G + LVME C G+L + + KA I +
Sbjct: 58 LQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSC----RKAELMTPDPTTLQRMACEIALGL 113
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-------VFIDEGKVYRDIVGSA 261
H H +H DL N LL+ +K D+GLS ++ +++ +
Sbjct: 114 LHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPL---- 166
Query: 262 YYVAPEVLRRSYG--------KEIDVWSAGVILYILLS-GVPPF 296
++APE++ +G KE +VWS GV ++ L G P+
Sbjct: 167 RWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPY 210
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 544 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.98 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.94 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.93 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.93 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.91 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.89 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.87 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.86 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.84 | |
| PTZ00183 | 158 | centrin; Provisional | 99.84 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.83 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.83 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.82 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.81 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.81 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.78 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.77 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.77 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.75 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.74 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.7 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.68 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.67 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.64 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.58 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.57 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.51 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.48 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.47 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.46 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.45 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.44 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.43 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.4 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.39 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.35 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.34 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.31 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.29 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.27 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.23 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.19 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.16 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.14 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.13 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.11 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.09 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.06 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.06 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 99.05 | |
| PTZ00183 | 158 | centrin; Provisional | 99.05 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.05 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.03 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.02 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.01 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 99.0 | |
| PTZ00184 | 149 | calmodulin; Provisional | 98.99 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 98.99 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.97 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.96 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.96 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.95 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.94 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.93 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.93 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.93 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.88 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.87 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.84 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.84 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.83 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.81 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.76 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.75 | |
| KOG4251 | 362 | consensus Calcium binding protein [General functio | 98.73 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.72 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.71 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 98.71 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.71 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-62 Score=458.94 Aligned_cols=268 Identities=39% Similarity=0.683 Sum_probs=247.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChh----cHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ----DREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~----~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+.+..... ....+.+|+++|++|. |||||+++++|+.
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeeec
Confidence 3677899999999999999999999999999999999887654422 2334679999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
....||||||++||.|.+.+..++.+.+...+.+++|++.|+.|||++||+||||||+|||+..+..+..+||+|||+|+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999888788899999999999
Q ss_pred cccCCCceecccCCccccCcccccc----cCCCcchHHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHhCCccCCCCccc
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLRR----SYGKEIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILKGGVDFESEPWL 321 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 321 (544)
...+.....+.||||.|.|||++.. .+..++||||+||+||-+++|.+||.+..... +.+.|.++.+.+.++.|.
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~ 407 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD 407 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh
Confidence 9998888899999999999999853 25568999999999999999999998876655 889999999999999999
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
.++++.++||.+||..||++|||++|+|+||||+..+.
T Consensus 408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 408 RISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 99999999999999999999999999999999987653
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-57 Score=450.57 Aligned_cols=264 Identities=35% Similarity=0.585 Sum_probs=246.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
.+|..++.||+|||+.||.+++..+|..||+|++.+.........+.+.+||++.+.|. |||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 56999999999999999999999999999999999887777888899999999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-C
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-K 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~ 252 (544)
+|+|+.++|..++++++.++|.+++.+++||+.||.|||+++|+|||||..|+|| +.+.+|||+|||+|..+... .
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999999999999999999999999999999999999999999999 66678999999999988744 5
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
...+.||||.|.|||++. ..++..+||||+||+||-|++|++||....-.+.+..|....+.+|. .++.++++||
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI 249 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLI 249 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHH
Confidence 667899999999999986 56999999999999999999999999999999999999999888776 5899999999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccCCCCCCCcc
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~ 365 (544)
.+||++||.+|||++++|.|+||+.+..+...|.
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp~ 283 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLDHPFFKSGFTPARLPS 283 (592)
T ss_pred HHHhcCCcccCCCHHHHhcCHhhhCCCcCCCCCc
Confidence 9999999999999999999999988777665543
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-58 Score=405.04 Aligned_cols=300 Identities=37% Similarity=0.717 Sum_probs=272.6
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.+.|.+.+.||+|.|+.||++.+..+|+.+|+|++.-.++. ....+.+.+|+.+-+.|+ |||||++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~-~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc-cccHHHHHHHHHHHHhcC-CCcEeehhhhhccccee
Confidence 3566799999999999999999999999999999988665554 347789999999999998 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||+|++.|++|..-+..+.-+++..+-.+++||+++|.|||.+||||||+||.|+|+...+...-+||+|||+|..+..
T Consensus 86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 99999999999988887777789999999999999999999999999999999999998877778899999999999987
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
+......+|||.|||||+++ .+|+..+|||+.||+||-|+.|.+||++.+...+++.|..+.+.++.+.|..+++++++
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS 245 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence 66667789999999999997 56999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAE 392 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 392 (544)
||++||..||++|.|+.|.|+|||+.+......+--...+...|++|++..+++-.++..+..
T Consensus 246 LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~s 308 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVIA 308 (355)
T ss_pred HHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987644333333567788999999999999998876653
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-56 Score=420.17 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=226.0
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eEEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-SVHLVM 174 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~lv~ 174 (544)
.+.+..||+|..|+||+|+|+.|+..+|+|++... .......++.+|+++++.+. ||+||.+||+|..++ .++|+|
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEeeh
Confidence 56678899999999999999999999999999432 35667789999999999995 999999999999998 599999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||+||+|.+++...+++++..+..++.+|++||.|||. ++||||||||+|||+ +..+.|||||||.+..+.+. .
T Consensus 158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS-~ 233 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS-I 233 (364)
T ss_pred hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh-h
Confidence 999999999999998999999999999999999999995 999999999999999 45568999999999988776 5
Q ss_pred eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCC-----ChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 254 YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAE-----TEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
..+++||..|||||.+.+ .|+.++||||||++++||++|+.||... ...+++..|+.+..+-.+ ...+|+++
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP--~~~fS~ef 311 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLP--EGEFSPEF 311 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCC--cccCCHHH
Confidence 578899999999999975 6999999999999999999999999774 445677777775332222 12489999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
++||..||++||.+||++.|||+|||+++...
T Consensus 312 ~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 312 RSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 99999999999999999999999999997644
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-54 Score=428.50 Aligned_cols=322 Identities=60% Similarity=1.004 Sum_probs=294.4
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
...+...|.+++.||+|.||.||+|+++.+|..+|+|++.+.........+.+.+|+.+|+++.+|||||.++++|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 45567789999999999999999999999999999999988877666677899999999999998999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-CccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~-~~~vkl~Dfg~a~~ 247 (544)
.+++|||+|.||.|.+.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+..... .+.+|++|||++..
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999999887 4999999999999999999999999999999999999976644 45899999999999
Q ss_pred ccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
...+......+||+.|+|||++. ..|+..+||||+||++|.|++|..||++.+..+....+..+.+.+..++|..++..
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISES 268 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHH
Confidence 88866777899999999999998 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHh
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMF 406 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F 406 (544)
+++||+.||..||.+|+|+.++|+|||++........+....+..++.++..++.+...........++ +..++.+|
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 345 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKEMF 345 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHHH
Confidence 999999999999999999999999999998766666666667777788888888888887777777666 77888899
Q ss_pred cccCCCCC
Q 009091 407 ANMDTDKS 414 (544)
Q Consensus 407 ~~~D~~~~ 414 (544)
..+|.+++
T Consensus 346 ~~~~~~~~ 353 (382)
T KOG0032|consen 346 KLMDTDNN 353 (382)
T ss_pred Hhhccccc
Confidence 99998777
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-54 Score=409.60 Aligned_cols=263 Identities=36% Similarity=0.616 Sum_probs=239.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|.+.+.||+|+||+||+|+++.++..||||.+.+.+. .....+.+..|+.+|+.+. |||||.++++++.++.+|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999977654 4566788899999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCC---ccEEEeecCCcccccC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG---AMLKATDFGLSVFIDE 250 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~---~~vkl~Dfg~a~~~~~ 250 (544)
||||.||+|.+++...+.+++..++.++.||+.||.+||+++||||||||+||||+..... ..+||+|||+|+.+.+
T Consensus 88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~ 167 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP 167 (429)
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence 9999999999999999999999999999999999999999999999999999999875332 6899999999999998
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
+....+.||+|.|||||+++ ..|+.|+|+||+|++||+|++|+.||...+..+++..+.++....+..+ ..++..+.+
T Consensus 168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~~~~ 246 (429)
T KOG0595|consen 168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNPLRE 246 (429)
T ss_pred hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCchhh
Confidence 88888899999999999995 7899999999999999999999999999999999988777655444433 346777889
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
++...|..+|.+|.+..+-+.|+++...+.
T Consensus 247 Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~ 276 (429)
T KOG0595|consen 247 LLISLLQRNPKDRISFEDFFDHPFLAANPQ 276 (429)
T ss_pred hhhHHHhcCccccCchHHhhhhhhcccCcc
Confidence 999999999999999999999999987653
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-54 Score=408.06 Aligned_cols=257 Identities=35% Similarity=0.656 Sum_probs=236.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||.++.+.+++.+|+|++.+.........+...+|..+|.+++ ||+||.++..|++.+.+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEEE
Confidence 44999999999999999999999999999999999988887778889999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc-ccCCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF-IDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~-~~~~~ 252 (544)
+||+.||.|...|.+.+.+++..++.++.+|+.||.|||+.|||||||||+|||| +..++|+|+|||+++. ...+.
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999 6667899999999995 44555
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
...++|||+.|||||++. ..|+..+|+||||+++|||++|.+||.+.+....++.|.++....+.. .++.+++++|
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~---~ls~~ardll 257 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG---YLSEEARDLL 257 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc---cCCHHHHHHH
Confidence 667789999999999875 679999999999999999999999999999999999999887443332 4799999999
Q ss_pred HHhcccCcCCCC----ChhhhhCCCccccC
Q 009091 332 RKMLIQDPKKRI----TSAEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rp----s~~ell~hp~f~~~ 357 (544)
+++|..||.+|. .+.+|-+||||+..
T Consensus 258 ~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 258 KKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 999999999996 68899999999764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-54 Score=419.94 Aligned_cols=256 Identities=35% Similarity=0.620 Sum_probs=236.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|..++.||+|+|++|++|+++.+++.||||++.+.....+...+.+.+|-..|.+|.+||.|++|+..|.+...+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 39999999999999999999999999999999988877777777888999999999988999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc-
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV- 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~- 253 (544)
||+++|+|.++|.+.+.+++..++.++.||+.||+|||++|||||||||+|||| +.++++||+|||.|+.+.....
T Consensus 154 e~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChhhcc
Confidence 999999999999999999999999999999999999999999999999999999 7778999999999987753211
Q ss_pred -------------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 254 -------------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 254 -------------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
..+++||..|.+||+|. +..+..+|||+|||+||+|+.|.+||.+.++--+++.|+.-.+.++.
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~-- 308 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE-- 308 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC--
Confidence 13589999999999997 45789999999999999999999999999999999999998888776
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..++.+++||+++|..||.+|+|+.+|.+||||...
T Consensus 309 --~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 309 --GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred --CCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 478999999999999999999999999999999753
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=386.04 Aligned_cols=253 Identities=35% Similarity=0.640 Sum_probs=237.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|...+.||.|+||+|.+++++.+|..+|+|++.+.........+...+|..+|+.+. ||+++++++.|.+.+.+||||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEEE
Confidence 4888999999999999999999999999999998888777777888999999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
||++||.|..++++.+++++..++.++.||+.||+|||+++|++|||||+|||| +.++.+||+|||+|+.+... .
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r--T 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR--T 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc--E
Confidence 999999999999999999999999999999999999999999999999999999 66779999999999988764 6
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
.+.||||.|+|||++. .+|+.++|.|||||++|||+.|.+||+..+...+++.|+.+.+.+|. .+++++++||++
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdLl~~ 274 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDLLKK 274 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHHHHH
Confidence 7889999999999886 67999999999999999999999999999999999999999998886 479999999999
Q ss_pred hcccCcCCCC-----ChhhhhCCCccccC
Q 009091 334 MLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+|+.|-.+|. -..+|.+||||++.
T Consensus 275 LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 275 LLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred HHhhhhHhhhcCcCCCccccccCcccccc
Confidence 9999999993 56789999999853
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-53 Score=420.95 Aligned_cols=257 Identities=38% Similarity=0.634 Sum_probs=239.6
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++++-||.|+.|.|-+|++..||+.+|||++.+...........+.+||.+|+-+. ||||++++++|+...++|+|+|
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEEEEE
Confidence 999999999999999999999999999999998775555556678999999999998 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCcee
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR 255 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~ 255 (544)
|++||.|++++..++++++.+++.+++||+.|+.|||..+|+||||||+|+|| +....|||+|||+|..-.++....
T Consensus 93 yv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGKLLE 169 (786)
T ss_pred ecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999 444569999999999888888888
Q ss_pred cccCCccccCccccccc--CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 256 DIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 256 ~~~gt~~y~aPE~~~~~--~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
+.||+|+|.|||++.+. -+.++||||+|||||.|+||+.||.+.+...++..+.+|.+..+. .++.++++||++
T Consensus 170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs----~Is~eaQdLLr~ 245 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS----NISSEAQDLLRR 245 (786)
T ss_pred ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC----cCCHHHHHHHHH
Confidence 99999999999998754 488999999999999999999999999999999999999988774 589999999999
Q ss_pred hcccCcCCCCChhhhhCCCccccCCCC
Q 009091 334 MLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
||..||++|.|.+||++|||+......
T Consensus 246 ml~VDp~~RiT~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 246 MLDVDPSTRITTEEILKHPFLSGYTSL 272 (786)
T ss_pred HhccCccccccHHHHhhCchhhcCCCC
Confidence 999999999999999999999876543
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-52 Score=412.93 Aligned_cols=259 Identities=42% Similarity=0.715 Sum_probs=232.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh--hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK--QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
....|.+++.||+|+||+|++|.+..++..||+|++.+...... ...+.+.+|+.+++++..||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 44569999999999999999999999999999997765432211 2455677899999999889999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc-
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI- 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~- 248 (544)
++||||||.||+|++++...+++.+..++.+++||+.|++|||++||+||||||+|||++.+. .++||+|||++...
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~--~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE--GNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC--CCEEEeccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999995432 68999999999988
Q ss_pred cCCCceecccCCccccCcccccc-c-C-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCC-C
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLRR-S-Y-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI-S 324 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~~-~-~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~ 324 (544)
.......+.+||+.|+|||++.+ . | +.++||||+||+||.|++|..||.......++..|.++.+.++.. + +
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~----~~S 248 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSY----LLS 248 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCC----cCC
Confidence 46667788999999999999975 3 5 588999999999999999999999988888998988887776653 4 9
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+++++||++||..||.+|+|+.+++.||||+.
T Consensus 249 ~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 249 PEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 99999999999999999999999999999997
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-53 Score=384.92 Aligned_cols=256 Identities=27% Similarity=0.557 Sum_probs=220.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|..+.++|+|+||+||+|+++.||+.||||++..+. ..+...+-..+||++|+.|. |+|+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 35888889999999999999999999999999996543 23344556689999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CC
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~ 251 (544)
+|||+. ++.+.|.. ...++...+..+++|++.|+.|||++++|||||||+||||+.. +.+||||||+|+.+. ++
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~---gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN---GVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC---CcEEeccchhhHhhcCCc
Confidence 999976 66666655 4669999999999999999999999999999999999999554 589999999999987 67
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC------------------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------------------ 311 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~------------------ 311 (544)
..++.++.|.+|+|||++.+ .|+.++||||+||++.||++|.+.|.+.++-+.+..|.+.
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 77888999999999998865 6999999999999999999999999999887766555431
Q ss_pred -CccCCCC--------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 312 -GVDFESE--------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 312 -~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
+..++.+ ..+.++..+.+|++.||..||.+|++.+++|.||||.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 1122222 1234677899999999999999999999999999993
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-52 Score=404.02 Aligned_cols=259 Identities=32% Similarity=0.580 Sum_probs=233.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.++..||+||||.||+|+.+.||..+|+|++.++........+.++.|-.+|.... +|.||+++..|.+..++|||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeEEE
Confidence 45899999999999999999999999999999999988888888889999999999965 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC---
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE--- 250 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~--- 250 (544)
|||++||++..+|...+.+++..++.++.+++.|++.||+.|+|||||||+|+|| +..++|||+|||++..+..
T Consensus 220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999 6777999999999853311
Q ss_pred -------------------C--Cc----e--------------------ecccCCccccCccccc-ccCCCcchHHHHHH
Q 009091 251 -------------------G--KV----Y--------------------RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGV 284 (544)
Q Consensus 251 -------------------~--~~----~--------------------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~ 284 (544)
. .. . ...+|||.|||||++. ..|+..+|+|||||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence 0 00 0 0247999999999986 56999999999999
Q ss_pred HHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC---hhhhhCCCccccC
Q 009091 285 ILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMREG 357 (544)
Q Consensus 285 ~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 357 (544)
|+||||.|.+||.+.+..+....|..-...+..+....++++++|||.+||. ||.+|.- ++||-+||||+..
T Consensus 377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 9999999999999999999999998877666666666789999999999999 9999986 8899999999864
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-51 Score=393.38 Aligned_cols=263 Identities=29% Similarity=0.438 Sum_probs=224.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~ 170 (544)
.+.|..+++||+|.||.||+|++..+|..||+|++...... +.......+||.+|++|. ||||+++.+...+. +.+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCceE
Confidence 45588899999999999999999999999999999765432 334556679999999997 99999999988776 789
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||+|||+. +|.-++... -.|++.+++.+++||+.||+|||.+||+|||||.+|||| +.++.+||+|||+|+.+.
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeecc
Confidence 999999987 887777663 369999999999999999999999999999999999999 666789999999999765
Q ss_pred CC--CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc----
Q 009091 250 EG--KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL---- 321 (544)
Q Consensus 250 ~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~---- 321 (544)
.. ..++..+-|.+|+|||++.+ .|+.++|+||.||||.||++|++.|.+.++-+.+..|.+-........|.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 43 34567789999999998864 59999999999999999999999999999998888887643332222222
Q ss_pred ---------------------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 322 ---------------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 322 ---------------------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
.++..+.+|+..||..||.+|.||.++|+|+||+..+.+-
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~ 410 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPC 410 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCC
Confidence 3577899999999999999999999999999996655443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-52 Score=401.55 Aligned_cols=263 Identities=29% Similarity=0.454 Sum_probs=225.9
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-e
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-S 169 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~ 169 (544)
.+.++|.+.++||.|+||.||+|+.+.++..||||.+++.- ...++ -.-.||+..|++|..||||+++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf-~s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKF-YSWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhh-ccHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 45678999999999999999999999999999999885533 23222 234589999999988999999999998877 9
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
+++|||||+ .+|+++++.+ +.+++..++.|+.||+.||+|+|++|++|||+||+|||+.. ...|||+|||+|+.+
T Consensus 85 L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~---~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG---NDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc---cceeEeccccccccc
Confidence 999999995 5999999876 45999999999999999999999999999999999999953 447999999999999
Q ss_pred cCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc-------
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP------- 319 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~------- 319 (544)
.....++.++.|.+|+|||++. +.|+.+.||||+|||++|+++-++.|.+.++.+.+..|+.-........
T Consensus 161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 9988899999999999999874 5699999999999999999999999999988877766654211111110
Q ss_pred -------------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 320 -------------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 320 -------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
...++.++.++|.+||.+||.+||||.++|+||||+....
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 1236889999999999999999999999999999987543
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-52 Score=373.76 Aligned_cols=294 Identities=33% Similarity=0.603 Sum_probs=255.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
-..|.-.+.||+|..++|-++.++.+|..+|+|++....... ....+.-.+|+.+|+++.+||+|+.+.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 344777789999999999999999999999999996543221 223455678999999999999999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..+++|+|+|+.|.|.++|...-.+++...+.|++||++|+.|||.++||||||||+|||+ +.+.+|||+|||+|..
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFACQ 172 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceeec
Confidence 9999999999999999999998899999999999999999999999999999999999999 5667899999999999
Q ss_pred ccCCCceecccCCccccCccccc-------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLR-------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
+..+......||||+|+|||.+. ..|+..+|+|++||++|-|+.|.+|||.....-++..|+.+.+.+..+.|
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence 99999889999999999999874 24888999999999999999999999998888899999999999999999
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCC----cccHHHHHHHHHHHhhhHHHHHHHHH
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK----PIGSAVLSRMKQFRAMNKLKKMALKV 389 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~----~~~~~~~~~l~~~~~~~~l~~~~~~~ 389 (544)
..++...++||++||+.||.+|.|++|+|+||||........+ ..-...+.+...+++.++++-.++..
T Consensus 253 adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP~~~~~~~k~qt~~~aRkrFk~ail~v 325 (411)
T KOG0599|consen 253 ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSPVVEVELVKDQTSERARKRFKVAILTV 325 (411)
T ss_pred hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCCCcchhhhhhhhhHHhhhheeeeeehH
Confidence 9999999999999999999999999999999999543222221 11233445556677777776665543
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-52 Score=372.79 Aligned_cols=244 Identities=29% Similarity=0.538 Sum_probs=213.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEE-EEEeCCe-EEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG-AYEDRQS-VHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~-~~~~~~~-~~l 172 (544)
.|++.++||+|+||+||++.+..+|..+|.|.+.-. ......++.+..|+.+|+.|. |||||++++ .+..++. ++|
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhhHH
Confidence 499999999999999999999999999999998633 345566788999999999997 999999998 4444444 899
Q ss_pred EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH--cC--CEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 173 VMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHF--MG--VMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~--~~--ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
|||||.+|+|...++. .+.+++..+|.++.|++.||.+||. .+ |+||||||.||+| +.++.|||+|||+
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfGL 174 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFGL 174 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccchh
Confidence 9999999999988864 4569999999999999999999999 56 9999999999999 4556899999999
Q ss_pred cccccCCC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 245 SVFIDEGK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 245 a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
++.+.... ...+.+|||.||+||++. .+|+.++||||+||++|||+.-..||++.+--.+-..|..+.++ +-|-..
T Consensus 175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~--~~p~~~ 252 (375)
T KOG0591|consen 175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP--PLPDEH 252 (375)
T ss_pred HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC--CCcHHH
Confidence 99887643 345689999999999986 57999999999999999999999999999888888888887553 222246
Q ss_pred CCHHHHHHHHHhcccCcCCCCCh
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITS 345 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~ 345 (544)
+|..+..+|..|+..||..||+.
T Consensus 253 YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred hhhHHHHHHHHHccCCcccCCCc
Confidence 89999999999999999999997
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-50 Score=400.35 Aligned_cols=257 Identities=30% Similarity=0.534 Sum_probs=236.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.++||+|+||+|++|..+.++..+|||++++.......+.+....|..++....+||.++.++..|....++|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 35599999999999999999999999999999999999888889999999999999988889999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~ 251 (544)
||||+.||++.. +...+.+++..++.|+..|+.||.|||++||||||||.+|||| +.++.+||+|||+++..- .+
T Consensus 447 vmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~g 522 (694)
T KOG0694|consen 447 VMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQG 522 (694)
T ss_pred EEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCCCC
Confidence 999999999533 4445789999999999999999999999999999999999999 666789999999999754 56
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
....++||||.|||||++. ..|+.++|+|||||+||||+.|..||.+.++++++++|+...+.+|. .++.++.++
T Consensus 523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~i 598 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIAI 598 (694)
T ss_pred CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHHH
Confidence 6778899999999999987 56999999999999999999999999999999999999998777765 589999999
Q ss_pred HHHhcccCcCCCCCh-----hhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rps~-----~ell~hp~f~~~ 357 (544)
++++|.+||++|.-+ .+|..||||++-
T Consensus 599 l~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 599 MRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred HHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 999999999999975 688999999864
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-50 Score=360.39 Aligned_cols=262 Identities=30% Similarity=0.486 Sum_probs=223.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
.+|...+.||+|.||.||+|++..+|+.||||++.......... -...+||..|+.++ |+||+.++++|...+.+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~-~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGIN-RTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCcc-HHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 46888899999999999999999999999999997765443333 35679999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
+||++. +|...++.. ..++...++.++.++++||+|||++.|+||||||.|+|++ .++.+||+|||+|+.+....
T Consensus 80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCCC
Confidence 999975 899888765 4589999999999999999999999999999999999994 45589999999999887544
Q ss_pred ce-ecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc--------
Q 009091 253 VY-RDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL-------- 321 (544)
Q Consensus 253 ~~-~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-------- 321 (544)
.. ...+-|.+|+|||++. ..|+..+||||.||++.||+-|.+-|.+.++-+.+..|.+.-.......|+
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 33 3347899999999885 459999999999999999999999999999988888777643322222222
Q ss_pred ----------------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 322 ----------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 322 ----------------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
..+.++.||+..||..||.+|+++.|+|+|+||+..+.+.
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt 291 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPT 291 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCC
Confidence 2467889999999999999999999999999999865543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-51 Score=398.22 Aligned_cols=255 Identities=32% Similarity=0.556 Sum_probs=232.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||+|+||+||+|+.+.+.+.||+|.+.+... .+.+...+.+|+++++.|+ ||||+.++++|+...++|+|+
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEEe
Confidence 58888999999999999999999999999999977553 4556778999999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-c
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-V 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~ 253 (544)
|||.| +|..+|...+.++++.++.++.+++.||.|||+++|+|||+||.|||+ +..+.+|+||||+|+....+. .
T Consensus 81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCcee
Confidence 99977 999999999999999999999999999999999999999999999999 667789999999999876543 4
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....|||.|||||++. ++|+..+|+|||||++|||++|++||+..+...+.+.|......++. ..+..++.|+.
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~----~~S~~f~nfl~ 232 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS----TASSSFVNFLQ 232 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc----cccHHHHHHHH
Confidence 45678999999999886 56999999999999999999999999999998999999887655444 57999999999
Q ss_pred HhcccCcCCCCChhhhhCCCccccCCC
Q 009091 333 KMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
.+|.+||.+|.|..+++.|||.++...
T Consensus 233 gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 233 GLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred HHhhcChhhcccHHHHhcChHHhhhhh
Confidence 999999999999999999999987543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-50 Score=398.00 Aligned_cols=255 Identities=33% Similarity=0.559 Sum_probs=222.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
..+|..-.+||+|+.|.||.|....++..||||.+.... ....+-+.+|+.+|+.++ |+|||.+++.|...+.+|+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhcc-chHHHHHHHHhcccceeEE
Confidence 467888899999999999999999999999999996654 344567889999999998 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++||+|.+.+... .++|..++.++++++.||+|||.+||+|||||.+|||++. ++.+||+|||++..+....
T Consensus 348 VMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~---~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM---DGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred EEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc---CCcEEEeeeeeeecccccc
Confidence 99999999998877654 5999999999999999999999999999999999999954 4569999999999887654
Q ss_pred -ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh-CCccCCCCcccCCCHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-GGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~ 329 (544)
...+.+|||.|||||++. ..|+.++||||||++++||+.|.+||........+..|.. +...+. .+..+|+.+++
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk--~~~klS~~~kd 501 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLK--NPEKLSPELKD 501 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcC--CccccCHHHHH
Confidence 445789999999999985 6799999999999999999999999997766555555544 333333 33478999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|+.+||..|+.+|++|.|||+||||+..
T Consensus 502 FL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 502 FLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred HHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 9999999999999999999999999543
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-50 Score=376.39 Aligned_cols=298 Identities=32% Similarity=0.529 Sum_probs=242.1
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED- 166 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 166 (544)
....+..+|...+.||.|+||.|+.|.++.+|..||||++.. .+......++..+|+.+|++++ |+||+.+.+++..
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPP 93 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHhc-CCCcceEEeecccc
Confidence 445566778888999999999999999999999999998843 3445667788999999999998 9999999998865
Q ss_pred ----CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 167 ----RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 167 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
-+.+|+|+|+| +.+|...++.+..+++.++..+++|++.||.|+|+.+|+||||||+|+|+ +.+..+|||||
T Consensus 94 ~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DF 169 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDF 169 (359)
T ss_pred cccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccc
Confidence 35799999999 55899988888889999999999999999999999999999999999999 55567999999
Q ss_pred CCcccccC---CCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh-------
Q 009091 243 GLSVFIDE---GKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------- 310 (544)
Q Consensus 243 g~a~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~------- 310 (544)
|+|+.... ....+.++.|.+|+|||++. ..|+.+.||||+||++.||++|++.|.+...-..+..|+.
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 99998864 34456788999999999874 5699999999999999999999999988765544443332
Q ss_pred ----------------CCccCCCCc----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHH
Q 009091 311 ----------------GGVDFESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVL 370 (544)
Q Consensus 311 ----------------~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~ 370 (544)
.....+..+ .+..++.+.+|+.+||..||.+|+|++|+|+||||.....+.++|......
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~~ 329 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPIF 329 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCCC
Confidence 111112111 236789999999999999999999999999999999999998888654443
Q ss_pred HHHHHHHhhhHHHHHHHHHHH
Q 009091 371 SRMKQFRAMNKLKKMALKVIA 391 (544)
Q Consensus 371 ~~l~~~~~~~~l~~~~~~~~~ 391 (544)
...+.-.+...+++.++..+.
T Consensus 330 ~~~~~~~~~~~~r~~i~~e~~ 350 (359)
T KOG0660|consen 330 DSFEHELTEEELRELIYKEIL 350 (359)
T ss_pred ccccccccHHHHHHHHHHHHH
Confidence 222222344555666555533
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-49 Score=380.68 Aligned_cols=259 Identities=34% Similarity=0.597 Sum_probs=222.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----------hhcHHHHHHHHHHHHhccCCCCeeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----------KQDREDIKREIQIMQHLSGQQNIVEFR 161 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----------~~~~~~~~~E~~~l~~l~~h~~iv~~~ 161 (544)
...|++++.||+|.||.|-+|++..+++.||||++.+..... ....+...+||.+|++|. |||||+|+
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~Li 174 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKLI 174 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEEE
Confidence 345999999999999999999999999999999997654322 122367899999999998 99999999
Q ss_pred EEEEeC--CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 162 GAYEDR--QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 162 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
++..+. +.+|||+|||..|.+...=.....+++.+++.|++.++.||+|||.+|||||||||+|+|| +.+++|||
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~VKI 251 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTVKI 251 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcEEe
Confidence 999764 5799999999988875432222238999999999999999999999999999999999999 44568999
Q ss_pred eecCCcccccCC------CceecccCCccccCcccccc---c--CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 009091 240 TDFGLSVFIDEG------KVYRDIVGSAYYVAPEVLRR---S--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI 308 (544)
Q Consensus 240 ~Dfg~a~~~~~~------~~~~~~~gt~~y~aPE~~~~---~--~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i 308 (544)
+|||.+.....+ ......+|||.|+|||+..+ . .+.+.||||+||+||.|+.|+.||.+....++++.|
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 999999866322 22334689999999998743 1 477899999999999999999999999999999999
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
......++..+ .+.+.+++||.+||.+||.+|.+..+|..|||....
T Consensus 332 vn~pL~fP~~p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 332 VNDPLEFPENP--EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hcCcccCCCcc--cccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 99888777654 578999999999999999999999999999999765
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-50 Score=383.33 Aligned_cols=257 Identities=34% Similarity=0.539 Sum_probs=213.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--eEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ--SVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~l 172 (544)
.|..++.||+|+||.||++.+..+|...|||.+.... ....+.+.+|+.+|.+|. |||||+++|...... .++|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEe
Confidence 4888999999999999999999999999999885542 122677899999999998 999999999754444 6999
Q ss_pred EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-
Q 009091 173 VMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE- 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~- 250 (544)
+|||+++|+|.+++...+ .+++..++.+.+|+++||.|||++|||||||||+|||+... ++.+||+|||++.....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLESK 171 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC--CCeEEeccCccccccccc
Confidence 999999999999999877 79999999999999999999999999999999999999542 45799999999987763
Q ss_pred ---CCceecccCCccccCcccccccC--CCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhCCccCCCCcccCCC
Q 009091 251 ---GKVYRDIVGSAYYVAPEVLRRSY--GKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 251 ---~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
........||+.|||||++.... ..++|||||||++.||+||..||... .....+-.+....... .....++
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P--~ip~~ls 249 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP--EIPDSLS 249 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC--CCCcccC
Confidence 12234578999999999997433 34999999999999999999999873 3333233333333111 2233589
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+++++||.+||..||++||||+++|+|||.+....
T Consensus 250 ~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 250 DEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 99999999999999999999999999999977543
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-50 Score=376.09 Aligned_cols=257 Identities=37% Similarity=0.658 Sum_probs=240.7
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.-+|.+.+.||.|.||.|-+|.....|+.||||.|.+.+...+++.-.+.+||++|..|. ||||+.++.+|+..+.
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDK 127 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCce
Confidence 345667999999999999999999999999999999999999888999999999999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+.|||||..+|.|++++..++.+++.+++.+++||+.|+.|||+++|+|||||.+|||| +.++++||+|||++..+.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 555679999999999999
Q ss_pred CCCceecccCCccccCccccccc-C-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLRRS-Y-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
......++||+|.|.+||++++. | ++.+|-|||||+||-|+.|..||.+.....++..|.++.+..+.. +..+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~-----PSdA 279 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET-----PSDA 279 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC-----CchH
Confidence 88899999999999999999764 4 789999999999999999999999999999999999988766543 5677
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
.-||++||-.||.+|.|++++-.|-|+.
T Consensus 280 ~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 280 SGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred HHHHHHHHhcCcccchhHHHHhhhheee
Confidence 8999999999999999999999999985
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-49 Score=374.73 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=224.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+...||.|..++||+|++..++..||||++...++... .+.+.+|+..|+.+. ||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEEe
Confidence 449999999999999999999999999999999987765433 788999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|.||.+|++.++++.. ..++|..++.|.+++++||.|||++|.||||||+.|||| +.++.|||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeeccc
Confidence 9999999999999873 459999999999999999999999999999999999999 66678999999987765432
Q ss_pred -Cce----ecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC------C
Q 009091 252 -KVY----RDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE------S 317 (544)
Q Consensus 252 -~~~----~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~------~ 317 (544)
... .+.+||++|||||++. ..|+.|+||||||++..||.+|..||........+-.-+++.++.+ .
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 111 4568999999999964 4599999999999999999999999998887776655555544322 2
Q ss_pred CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 318 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.....++..++.+|..||.+||.+||||+++|+|+||+...
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 22335677899999999999999999999999999998764
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-49 Score=363.89 Aligned_cols=265 Identities=29% Similarity=0.426 Sum_probs=222.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~ 171 (544)
+.|+.+.+|++|+||.||+|+++.|+..||+|+++..+....... .-.+||.+|.+++ |||||.+-.+... -+.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~~-H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKAR-HPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhcC-CCCeeeeEEEEeccccceee
Confidence 348899999999999999999999999999999976653333333 3458999999998 9999999888764 35799
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||||+. +|..++..-+ ++...+++.++.|++.|+.|||.+.|+|||||++|+|++ ..+.+||+|||+|+.+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGILKIADFGLAREYGS 229 (419)
T ss_pred eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcEEecccchhhhhcC
Confidence 99999976 8999888754 799999999999999999999999999999999999994 455799999999999876
Q ss_pred C-CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc-------------
Q 009091 251 G-KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD------------- 314 (544)
Q Consensus 251 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~------------- 314 (544)
. ...+..+-|.+|+|||++.+ .|+.+.|+||+|||+.||+++++.|.+.++.+.++.|.+....
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 5 34566788999999998864 5999999999999999999999999999998888877652111
Q ss_pred ------CCCCcc---------cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 315 ------FESEPW---------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 315 ------~~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
++..+. ..+++...+|+..+|..||.+|.||.+.|+|+||.+.+.+.+..
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~ 374 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPS 374 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChh
Confidence 111111 11458889999999999999999999999999999987766543
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-50 Score=354.73 Aligned_cols=255 Identities=33% Similarity=0.657 Sum_probs=234.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+++.||.|.||.||+|+.+.++..||+|++.++.........++.+|+++-.+|+ ||||++++++|-+....|++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEEE
Confidence 45999999999999999999999999999999998887766677788999999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKII--AQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||.++|+|+..|. ....+++...+.++.|++.||.|||.++|+||||||+|+|++. .+.+||+|||-+.... .
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~lkiAdfGwsV~~p-~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAP-S 176 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCCeeccCCCceeecC-C
Confidence 99999999999998 5667999999999999999999999999999999999999954 4579999999998765 3
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
....+.|||..|.+||+.. ..++..+|+|++|++.||++.|.+||......+.+..|.+..+.++. .++..++|+
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~----~is~~a~dl 252 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPS----TISGGAADL 252 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCc----ccChhHHHH
Confidence 3446789999999999987 46899999999999999999999999999999999999998877763 689999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|.+||.++|.+|.+..|++.|||+..+
T Consensus 253 I~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHhccCccccccHHHHhhhHHHHhc
Confidence 999999999999999999999998764
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=359.73 Aligned_cols=268 Identities=37% Similarity=0.661 Sum_probs=239.4
Q ss_pred cccccceec-ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 009091 91 DIRQFYTLG-KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--- 166 (544)
Q Consensus 91 ~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 166 (544)
.+.+.|++. .+||-|-.|.|..|.++.|+..+|+|++.. .....+|+++.-...+|||||.++++|+.
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 355567764 579999999999999999999999998732 34567899998888899999999998864
Q ss_pred -CCeEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 167 -RQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 167 -~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
...+.||||.++||.|++.+..++. +++.++..|++||..|+.|||+.+|.||||||+|+|.+....+..+||+|||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccc
Confidence 4568899999999999999998766 9999999999999999999999999999999999999988888999999999
Q ss_pred CcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHhCCccCCCC
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET----EKGIFDAILKGGVDFESE 318 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~----~~~~~~~i~~~~~~~~~~ 318 (544)
+|+.-.......+.+-||.|.|||+++ ..|+...|+||+||++|-|++|.+||+... ..++...|..+.+.|+.+
T Consensus 210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 999877666677889999999999997 569999999999999999999999998764 356788899999999999
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCccc
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~ 366 (544)
.|..+|+..+++|+.+|..+|.+|.|+.++++|||+.........++.
T Consensus 290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~ 337 (400)
T KOG0604|consen 290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLS 337 (400)
T ss_pred hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCch
Confidence 999999999999999999999999999999999999887665555543
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-48 Score=365.15 Aligned_cols=259 Identities=32% Similarity=0.549 Sum_probs=231.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||.|.-|+||+|....++..+|+|++.+..........+...|-+||+.+. ||.++++|+.|+.+...|+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCL 154 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEE
Confidence 356999999999999999999999999999999998877766666777888999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||+||+|..++.++ +.+++..++.++.+++.||+|||..|||+|||||+|||| ..+++|.|+||.++....-
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCC
Confidence 99999999999988765 459999999999999999999999999999999999999 5556899999998654310
Q ss_pred ---------------------------------C-C-----------------------ceecccCCccccCcccccc-c
Q 009091 251 ---------------------------------G-K-----------------------VYRDIVGSAYYVAPEVLRR-S 272 (544)
Q Consensus 251 ---------------------------------~-~-----------------------~~~~~~gt~~y~aPE~~~~-~ 272 (544)
. . ....++||-.|+|||++.+ .
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 0113579999999999975 5
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC----hhhh
Q 009091 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT----SAEV 348 (544)
Q Consensus 273 ~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~el 348 (544)
.+.++|+|+|||+||||+.|..||.+.+..+.+.+|+.....++..+ .++..++|||+++|.+||++|.. |+||
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 89999999999999999999999999999999999999888887765 67899999999999999999999 9999
Q ss_pred hCCCccccC
Q 009091 349 LEHPWMREG 357 (544)
Q Consensus 349 l~hp~f~~~ 357 (544)
-+||||+..
T Consensus 390 K~HpFF~gV 398 (459)
T KOG0610|consen 390 KRHPFFEGV 398 (459)
T ss_pred hcCccccCC
Confidence 999999864
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=378.90 Aligned_cols=245 Identities=29% Similarity=0.437 Sum_probs=211.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCe-EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNS-YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-SVHLV 173 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~-~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~lv 173 (544)
..+.+.||+|+||+||++.+. |.. ||+|++......... .+.|.+|+.+|.+|+ |||||+++|++.... .++||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 455667999999999999987 556 999999765544444 779999999999998 999999999999887 79999
Q ss_pred EeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CEeecCCCCceeeecCCCCc-cEEEeecCCccccc
Q 009091 174 MELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMG-VMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFID 249 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-ivHrDikp~Nill~~~~~~~-~vkl~Dfg~a~~~~ 249 (544)
|||+++|+|.+++.. .+.++...+..++.||+.|+.|||+.+ ||||||||+|||+ +.+. ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCccceeec
Confidence 999999999999988 578999999999999999999999999 9999999999999 4454 89999999998766
Q ss_pred CC-CceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EG-KVYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.. .......||+.|||||++.+ .|+.++||||||++||||+||+.||...........+..+......+. .+++
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~--~~~~ 273 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPK--ECPP 273 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCc--cCCH
Confidence 54 23334689999999999985 399999999999999999999999999888666666665554444332 3799
Q ss_pred HHHHHHHHhcccCcCCCCChhhhh
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell 349 (544)
.+..+|.+||..||.+||++.+++
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHH
Confidence 999999999999999999998875
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=383.64 Aligned_cols=253 Identities=32% Similarity=0.614 Sum_probs=224.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|.+.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEEE
Confidence 45999999999999999999999999999999997654434445567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEEeeccCceEcCCCc-
Confidence 99999999999999888899999999999999999999999999999999999994 45679999999998765432
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+..+...++. .++..+++||.
T Consensus 173 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~ 247 (329)
T PTZ00263 173 -FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN----WFDGRARDLVK 247 (329)
T ss_pred -ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC----CCCHHHHHHHH
Confidence 3457999999999886 45889999999999999999999999988877777887776554432 47899999999
Q ss_pred HhcccCcCCCCC-----hhhhhCCCcccc
Q 009091 333 KMLIQDPKKRIT-----SAEVLEHPWMRE 356 (544)
Q Consensus 333 ~~l~~dp~~Rps-----~~ell~hp~f~~ 356 (544)
+||+.||.+|++ ++++++||||+.
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 999999999997 699999999976
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=378.23 Aligned_cols=253 Identities=28% Similarity=0.543 Sum_probs=223.3
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+.+++||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEEE
Confidence 5889999999999999999999999999999986544333344567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++...... .
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~~~~~~--~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFAKKLRDR--T 155 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcchhccCC--c
Confidence 9999999999999888899999999999999999999999999999999999994 4457999999999876542 2
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
...+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+..+...++. .+++.+++||.+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~ 231 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKK 231 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHHHHHHHHH
Confidence 3457999999999886 45889999999999999999999999998888888888777655443 468899999999
Q ss_pred hcccCcCCCCC-----hhhhhCCCccccC
Q 009091 334 MLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
||..||.+||+ ++++++||||+..
T Consensus 232 ~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 232 LLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 99999999995 9999999999753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=382.11 Aligned_cols=250 Identities=31% Similarity=0.556 Sum_probs=219.1
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++++. ||||+++++++...+.+||||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654434445567789999999997 99999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~ 258 (544)
++|.+++...+.+++..++.++.||+.||+|||+.||+||||||+|||++ .++.+||+|||++.... ........+
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCcccccCCCccccee
Confidence 99999999888899999999999999999999999999999999999994 45579999999987542 223334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|||++|..||...........+..+...++. .+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~ 232 (323)
T cd05571 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHccC
Confidence 999999999986 45899999999999999999999999988877777777766554432 5789999999999999
Q ss_pred CcCCCC-----ChhhhhCCCccccC
Q 009091 338 DPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
||.+|| ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999 89999999999763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-49 Score=377.75 Aligned_cols=273 Identities=27% Similarity=0.447 Sum_probs=229.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|+..+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|+.+|..+. ++||.++|+.+..+..++|+|
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHHH
Confidence 3777899999999999999999999999999996544 3455678899999999998 899999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
|||.||++.+.+...+.+.+..+..++++++.||.|||..+.+|||||+.|||+... +.+||+|||++.+.......
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES---GDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc---CcEEEEecceeeeeechhhc
Confidence 999999999999988888999999999999999999999999999999999999654 57999999999988765433
Q ss_pred -ecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 255 -RDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 255 -~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.+++|||.|||||++.+ .|+.++||||||++.+||++|.+|+........+-.|-+..++. ....+++.+++||.
T Consensus 168 r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~---L~~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 168 RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPR---LDGDFSPPFKEFVE 244 (467)
T ss_pred cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCc---cccccCHHHHHHHH
Confidence 67899999999999975 79999999999999999999999998766643333333322211 11257899999999
Q ss_pred HhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhh
Q 009091 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAM 379 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~ 379 (544)
.||++||+.||+|.+||+|+|++.. ........++.+.++++..
T Consensus 245 ~CL~k~P~~RpsA~~LLKh~FIk~a---~k~s~L~~~i~r~~~~~~~ 288 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLKHKFIKRA---KKTSELKELIDRYKRWRVK 288 (467)
T ss_pred HHhhcCcccCcCHHHHhhhHHHHhc---CCchHHHHHHHHHHHHhhc
Confidence 9999999999999999999999873 2222234455555555544
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-47 Score=372.45 Aligned_cols=258 Identities=28% Similarity=0.490 Sum_probs=215.1
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||+|+||.||+|.+..++..||+|.+.+...........+.+|+.+++++. |+||+.+++++...+.+++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEEE
Confidence 778899999999999999999999999999986654433344456789999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|+++|+|..++... ..+++..+..++.|++.||+|||+.||+||||||+|||++ .++.+||+|||++........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeCCCcEEcCCCCe
Confidence 99999998887643 3589999999999999999999999999999999999994 445799999999987655444
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....||+.|+|||++. ..++.++|||||||++|+|++|+.||...........+..............+++++.+||+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 237 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR 237 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 45568999999999886 56899999999999999999999999876543322222221111112222357899999999
Q ss_pred HhcccCcCCCCC-----hhhhhCCCccccC
Q 009091 333 KMLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
+||+.||.+||+ ++++++||||...
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 999999999997 8999999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-47 Score=383.96 Aligned_cols=258 Identities=29% Similarity=0.490 Sum_probs=219.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++.++. |+||+++++.+.+...+||||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEEE
Confidence 4889999999999999999999999999999997654433445567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcccccccccc
Confidence 9999999999999888999999999999999999999999999999999999994 45579999999987543210
Q ss_pred ----------------------------------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCC
Q 009091 253 ----------------------------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFW 297 (544)
Q Consensus 253 ----------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~ 297 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 012357999999999885 568999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcC---CCCChhhhhCCCccccC
Q 009091 298 AETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPK---KRITSAEVLEHPWMREG 357 (544)
Q Consensus 298 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~---~Rps~~ell~hp~f~~~ 357 (544)
+......+..+.........++...++++++++|.+|+. +|. .||++++|++||||+..
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 238 SETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 888888787777644333334444578999999998765 444 56899999999999764
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=377.59 Aligned_cols=256 Identities=24% Similarity=0.389 Sum_probs=207.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|.+.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.+. |+||+++++++...+.+++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEEEE
Confidence 44888899999999999999999999999999985432 2344567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||+++++|... ....+..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEcccccceecccccc
Confidence 999999998642 3467788899999999999999999999999999999994 44579999999998764322
Q ss_pred ceecccCCccccCcccccc------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 253 VYRDIVGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
......||..|+|||++.. ..+.++|||||||++|||++|+.||...........+..............++.+
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASRE 303 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHH
Confidence 2234679999999998742 2356899999999999999999999744332222221111111122222357899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+++||.+||..||++|||+.|+|+||||.....
T Consensus 304 l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 304 FRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 999999999999999999999999999987643
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-47 Score=379.27 Aligned_cols=257 Identities=30% Similarity=0.499 Sum_probs=222.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.++..+. ||||+++++++...+.+||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEEE
Confidence 4899999999999999999999999999999997654333345567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++..... ..
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a~~~~~--~~ 155 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLTDFGLSKGIVT--YA 155 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEEeCcCCccccc--cc
Confidence 9999999999998888899999999999999999999999999999999999994 455799999999986544 23
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc----cCCCHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW----LLISDSAKD 329 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~ 329 (544)
....||+.|+|||++. ..++.++|||||||++|||++|..||......+....+.........+.. ..+++++.+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 235 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD 235 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence 4567999999999886 46899999999999999999999999988777776666543322222221 256899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
||.+||..+|.+||++.++++||||+..
T Consensus 236 li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 236 LITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred HHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 9999999999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-47 Score=384.11 Aligned_cols=258 Identities=28% Similarity=0.541 Sum_probs=222.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||+||+|.+..+++.||||++.+...........+.+|+.+++.+. ||||+++++++...+.+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEEE
Confidence 4899999999999999999999999999999997654333445567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccccc
Confidence 999999999999988889999999999999999999999999999999999999 445679999999987543211
Q ss_pred -------------------------------------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCC
Q 009091 253 -------------------------------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVP 294 (544)
Q Consensus 253 -------------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~ 294 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 001246999999999875 568999999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC---hhhhhCCCccccC
Q 009091 295 PFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMREG 357 (544)
Q Consensus 295 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 357 (544)
||...........+......+..+....+++++++||.+||. +|.+|++ +.++++||||+..
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 999888777777776554444444444679999999999997 9999998 9999999999864
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=383.86 Aligned_cols=259 Identities=29% Similarity=0.482 Sum_probs=219.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+++.||+|+||+||+|.+..++..||+|++.+...........+.+|+.+++++. ||||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEE
Confidence 4889999999999999999999999999999997655444455677899999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC---
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG--- 251 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~--- 251 (544)
||++||+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++ ..+.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCccccccccc
Confidence 9999999999999888899999999999999999999999999999999999994 4557999999997532100
Q ss_pred ---------------------------------------------CceecccCCccccCccccc-ccCCCcchHHHHHHH
Q 009091 252 ---------------------------------------------KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285 (544)
Q Consensus 252 ---------------------------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~ 285 (544)
......+||+.|+|||++. ..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0012357999999999885 558999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhc--ccCcCCCCChhhhhCCCccccC
Q 009091 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML--IQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 286 l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l--~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+|||++|..||...........+.........+....+++++.+||.+|+ ..++..|++++++++||||++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999999999887776666555543333344444568999999999955 5566669999999999999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=377.63 Aligned_cols=253 Identities=30% Similarity=0.566 Sum_probs=222.1
Q ss_pred ccceecceecccCCeEEEEEEECCCC-CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+.|.+.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.+. ||||+++++++...+.+++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEEE
Confidence 45999999999999999999876554 689999987654444445667889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+++|+|.+++...+.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCC-
Confidence 99999999999999988899999999999999999999999999999999999999 44568999999999876442
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
....+||+.|+|||++. ..++.++|||||||++|||++|..||...........+..+...++. .+++.+.++|
T Consensus 185 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li 259 (340)
T PTZ00426 185 -TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----FLDNNCKHLM 259 (340)
T ss_pred -cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHH
Confidence 23568999999999986 45889999999999999999999999988887777887776554432 4688999999
Q ss_pred HHhcccCcCCCC-----ChhhhhCCCcccc
Q 009091 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356 (544)
Q Consensus 332 ~~~l~~dp~~Rp-----s~~ell~hp~f~~ 356 (544)
++||+.||.+|+ +++++++||||..
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 999999999995 8999999999975
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=373.99 Aligned_cols=248 Identities=29% Similarity=0.551 Sum_probs=217.2
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++++. ||||+++++++...+..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999999999999999987654444455667889999999997 9999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceecccCC
Q 009091 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGS 260 (544)
Q Consensus 182 L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~gt 260 (544)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+||
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999888889999999999999999999999999999999999999 4455799999999875432 2233456799
Q ss_pred ccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCc
Q 009091 261 AYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 261 ~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 339 (544)
+.|+|||++. ..++.++|||||||++|+|++|..||...........+......++. .+++.+.+||.+||..||
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dp 232 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD----GFDRDAKDLLIGLLSRDP 232 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC----cCCHHHHHHHHHHcCCCH
Confidence 9999999886 45899999999999999999999999988888888877776554432 578999999999999999
Q ss_pred CCCC---ChhhhhCCCccccC
Q 009091 340 KKRI---TSAEVLEHPWMREG 357 (544)
Q Consensus 340 ~~Rp---s~~ell~hp~f~~~ 357 (544)
.+|| ++.++|.||||...
T Consensus 233 ~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 233 TRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHcCCCCCHHHHHcCCCcCCC
Confidence 9997 57899999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=373.70 Aligned_cols=251 Identities=30% Similarity=0.534 Sum_probs=218.4
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||+||+|.++.+++.||+|++.+...........+..|+.++..+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999987654333444566778999998886799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~ 258 (544)
|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.... .........
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCeecCcCCCcccccc
Confidence 99999998888899999999999999999999999999999999999994 45579999999987643 222334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|+.||...........+..+...++. .+++++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~~L~~ 233 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLSQDAVDILKAFMTK 233 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHccc
Confidence 999999999886 45889999999999999999999999998888888888776544332 4789999999999999
Q ss_pred CcCCCCCh------hhhhCCCccccC
Q 009091 338 DPKKRITS------AEVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rps~------~ell~hp~f~~~ 357 (544)
||.+||++ +++++||||+..
T Consensus 234 dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 234 NPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 99999998 899999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-47 Score=365.19 Aligned_cols=263 Identities=35% Similarity=0.599 Sum_probs=237.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+..-|.+.+.||+|.|+.|-+|++--+|..||||++.+.+.. ......+.+|+..|+.++ |||||++|++......+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTKly 93 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-TLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTKLY 93 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-hhhhhHHHHHHHHHHHhc-CcCeeeeeehhcccceEE
Confidence 455699999999999999999999999999999999887764 344567889999999998 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+|+-.+|+|+++|.+. ..+.+..++.++.||+.|+.|||+..||||||||+||.+.. .-+.|||+|||++..+..
T Consensus 94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE--KlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE--KLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee--ecCceEeeeccccccCCC
Confidence 999999999999999875 56999999999999999999999999999999999999864 346899999999999988
Q ss_pred CCceecccCCccccCcccccc-cCC-CcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLRR-SYG-KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~-~~~-~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
+....+.||+..|.|||++.+ .|+ +++||||||||||.|++|+.||...++.+.+-.|+..++..+. .++.+++
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~eCr 247 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSKECR 247 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhHHHH
Confidence 888889999999999998764 464 6799999999999999999999999999999999988777665 5899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
+||..||..||.+|.+.++|..|+|++-..++..
T Consensus 248 dLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~s 281 (864)
T KOG4717|consen 248 DLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLS 281 (864)
T ss_pred HHHHHHHhcCchhhccHHHHhccccccCCCCCcc
Confidence 9999999999999999999999999987765443
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=374.87 Aligned_cols=249 Identities=29% Similarity=0.554 Sum_probs=217.6
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999997654444455677889999999997 99999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
|+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..... .......+
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCccccccccc
Confidence 99999998888899999999999999999999999999999999999994 455799999999876432 22334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......++. .+++++.+||.+||.+
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~ 232 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLLSGLLIK 232 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCC----CCCHHHHHHHHHHcCC
Confidence 999999999986 56899999999999999999999999888777777776665544432 4789999999999999
Q ss_pred CcCCCC-----ChhhhhCCCcccc
Q 009091 338 DPKKRI-----TSAEVLEHPWMRE 356 (544)
Q Consensus 338 dp~~Rp-----s~~ell~hp~f~~ 356 (544)
||.+|+ ++.++++||||..
T Consensus 233 dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 999997 8999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=359.09 Aligned_cols=256 Identities=29% Similarity=0.479 Sum_probs=216.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--C---
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--Q--- 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~--- 168 (544)
-.|.-.+++|+|+||.||.|....++..||||++...+ ..-.+|+++|+.+. |||||++..+|... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~-HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLD-HPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcC-CcCeeeEEEEEEecCCCchh
Confidence 34788899999999999999999999999999885432 12347999999997 99999999888532 2
Q ss_pred eEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...+||||++. +|...++. +..++.-.++-+..||++||.|||+.||+||||||.|+|++.+. +.+||||||.
T Consensus 96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t--g~LKicDFGS 172 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT--GVLKICDFGS 172 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC--CeEEeccCCc
Confidence 45689999976 99998875 56799999999999999999999999999999999999996543 6899999999
Q ss_pred cccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC----------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG---------- 312 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~---------- 312 (544)
|+.+..+....++..|..|+|||.+- ..|+.+.||||.||++.||+-|++.|.+.+....+..|.+--
T Consensus 173 AK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 173 AKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 99998887778889999999999875 469999999999999999999999999988877766664410
Q ss_pred ----------ccCCCCcc-----cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 313 ----------VDFESEPW-----LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 313 ----------~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
..+...+| ...++++.+|+.++|.++|.+|.++.|+|.||||.+...+
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 01111121 2468899999999999999999999999999999987665
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=374.12 Aligned_cols=250 Identities=32% Similarity=0.555 Sum_probs=218.3
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..+|..||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+||||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654434445567788999999997 99999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHhccccCCCCcccccc
Confidence 99999998888899999999999999999999999999999999999994 445799999999875322 22334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. +.++.++|||||||++|+|++|..||...........+......++. .+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~ 232 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 232 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHccC
Confidence 999999999885 56899999999999999999999999988877777777666554432 5789999999999999
Q ss_pred CcCCCC-----ChhhhhCCCccccC
Q 009091 338 DPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
||.+|+ ++.++++||||.+.
T Consensus 233 dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999998 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=351.94 Aligned_cols=262 Identities=29% Similarity=0.437 Sum_probs=219.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC-eeEEEEEEEeCC----
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN-IVEFRGAYEDRQ---- 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~-iv~~~~~~~~~~---- 168 (544)
..|...++||+|+||+||+|+.+.+|+.||+|++...... +-......+|+.+|++|+ |+| |+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence 3477788899999999999999999999999999654322 223345679999999998 888 999999998766
Q ss_pred --eEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 169 --SVHLVMELCSGGELFDKIIAQG----HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 169 --~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
.+++|+||++. +|..++.... .++...++.+++||+.||+|||++||+||||||+||||+. .+.+||+||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~---~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS---SGVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC---CCcEeeecc
Confidence 89999999965 9999998755 5888999999999999999999999999999999999954 568999999
Q ss_pred CCccccc-CCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 243 GLSVFID-EGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 243 g~a~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
|+|+... +.......++|.+|+|||++.+ .|+...||||+||+++||++++..|.+.++...+..|.+.........
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9999776 4444667789999999999864 499999999999999999999999999999887777765222111111
Q ss_pred c--------------------------cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 320 W--------------------------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 320 ~--------------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
| ...++...+++.+||+.+|.+|.|++.+|.||||.+.....
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence 1 11235889999999999999999999999999999875433
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-46 Score=371.79 Aligned_cols=255 Identities=29% Similarity=0.521 Sum_probs=222.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+..|+.++..+.+|++|+.+++++...+.+|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 78899999999999999999999999999999765443444566788899999999866789999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~ 254 (544)
|++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... .....
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCCCCce
Confidence 999999999998888899999999999999999999999999999999999994 44579999999987532 22333
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
...+||+.|+|||++. ..++.++|||||||++|+|++|+.||.+......+..+......++. .+++++.++|.+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~ 234 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKG 234 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHH
Confidence 4567999999999886 45899999999999999999999999988888888888776544432 478999999999
Q ss_pred hcccCcCCCCCh-----hhhhCCCccccC
Q 009091 334 MLIQDPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rps~-----~ell~hp~f~~~ 357 (544)
||..||.+|+++ +++++||||+..
T Consensus 235 ~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 235 LLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999999987 799999999763
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=382.52 Aligned_cols=257 Identities=29% Similarity=0.534 Sum_probs=217.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+.+.||+|+||+||+|.+..++..||||++.+.........+.+.+|+.+++++. ||||+++++++.+.+.+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEEE
Confidence 4899999999999999999999999999999986644333445567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++||+|.+++...+.+++..++.++.|++.||+|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeeccccccccccccc
Confidence 9999999999998888899999999999999999999999999999999999994 45579999999986321100
Q ss_pred ----------------------------------------------ceecccCCccccCccccc-ccCCCcchHHHHHHH
Q 009091 253 ----------------------------------------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285 (544)
Q Consensus 253 ----------------------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~ 285 (544)
.....+||+.|+|||++. ..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 001246999999999885 568999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCC---CChhhhhCCCcccc
Q 009091 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKR---ITSAEVLEHPWMRE 356 (544)
Q Consensus 286 l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R---ps~~ell~hp~f~~ 356 (544)
+|||++|..||........+..+.........+....++.++++||.+||. +|.+| +++.+++.||||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 999999999998887777777666533333333334578999999999998 77765 59999999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=379.21 Aligned_cols=259 Identities=32% Similarity=0.525 Sum_probs=223.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEEEE
Confidence 46999999999999999999999999999999986544333444556788999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCCc
Confidence 999999999998765 468999999999999999999999999999999999999 445679999999998764332
Q ss_pred -ceecccCCccccCcccccc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 253 -VYRDIVGSAYYVAPEVLRR-----SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.....+||+.|+|||++.. .++.++|||||||++|||++|..||.+......+..+.........+....++.+
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 277 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQ 277 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHH
Confidence 2234679999999998753 3788999999999999999999999998888888888765544444444468999
Q ss_pred HHHHHHHhcccCcCC--CCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKK--RITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~ 357 (544)
+.+||.+||..+|.+ |++++++++||||+..
T Consensus 278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999999999998 9999999999999863
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=381.90 Aligned_cols=258 Identities=30% Similarity=0.519 Sum_probs=219.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||+|+||+||+|++..++..||+|++.+...........+.+|+.+++.+. ||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEE
Confidence 4889999999999999999999999999999986544333445567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC---
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG--- 251 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~--- 251 (544)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 44567999999997532100
Q ss_pred ---------------------------------------------CceecccCCccccCccccc-ccCCCcchHHHHHHH
Q 009091 252 ---------------------------------------------KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285 (544)
Q Consensus 252 ---------------------------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~ 285 (544)
......+||+.|+|||++. ..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 0011347999999999885 568999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC---hhhhhCCCccccC
Q 009091 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMREG 357 (544)
Q Consensus 286 l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 357 (544)
+|||++|..||...........+.........+....+++++.++|.+|+ .+|.+|++ ++++++||||+..
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99999999999988776666666654444444555568999999999976 59999998 9999999999763
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-47 Score=348.04 Aligned_cols=268 Identities=35% Similarity=0.628 Sum_probs=238.6
Q ss_pred cccccee-cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 92 IRQFYTL-GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 92 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.+.|++ .+.||+|+|+.|--|....+|..||||++.+. ....+.++.+|++++..+++|+||+.++++|+++..+
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 4556776 46899999999999999999999999999764 4677889999999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||-|.||+|...|.++..+++.++..+.++|+.||.+||.+||.||||||+|||-...+.-.-||||||.+...+..
T Consensus 152 YLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~ 231 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKL 231 (463)
T ss_pred EEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998777667799999998765432
Q ss_pred C--------CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---------------h
Q 009091 251 G--------KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAET---------------E 301 (544)
Q Consensus 251 ~--------~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~---------------~ 301 (544)
+ ....+.+|+..|||||+.. ..|+.+.|.||||||||-|+.|.+||.+.- .
T Consensus 232 ~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ 311 (463)
T KOG0607|consen 232 NNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 311 (463)
T ss_pred CCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHH
Confidence 1 2234568999999999763 248999999999999999999999996542 3
Q ss_pred HHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 302 KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 302 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
..+++.|..+.+.|+...|..+|.+.+++|+.+|..|+.+|.++.++++|||+..-...+.
T Consensus 312 ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~eka 372 (463)
T KOG0607|consen 312 NKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKA 372 (463)
T ss_pred HHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhcc
Confidence 5688999999999999999999999999999999999999999999999999986554433
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-46 Score=379.49 Aligned_cols=258 Identities=32% Similarity=0.590 Sum_probs=223.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++..+. ||||+++++++.+.+.+++||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEEE
Confidence 5899999999999999999999999999999997654434445667889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEeecCCCCccCcccCcc
Confidence 9999999999998888899999999999999999999999999999999999994 45579999999998664432
Q ss_pred ----------------------------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH
Q 009091 253 ----------------------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG 303 (544)
Q Consensus 253 ----------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~ 303 (544)
......||+.|+|||++. ..++.++|||||||++|+|++|..||.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 223457999999999886 468999999999999999999999999888777
Q ss_pred HHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC-hhhhhCCCccccC
Q 009091 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT-SAEVLEHPWMREG 357 (544)
Q Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~ell~hp~f~~~ 357 (544)
....+.........+....+++++.+||.+||. ||.+||+ ++++++||||+..
T Consensus 238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 777776622222333333479999999999998 9999999 9999999999763
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=382.19 Aligned_cols=257 Identities=28% Similarity=0.497 Sum_probs=218.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++++. |+||+++++.+..++.+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEEE
Confidence 4899999999999999999999999999999986544333344567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC---
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG--- 251 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~--- 251 (544)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEEeCCCCccccccccc
Confidence 9999999999999888899999999999999999999999999999999999994 4557999999997532100
Q ss_pred -----------------------------------------CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHH
Q 009091 252 -----------------------------------------KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYIL 289 (544)
Q Consensus 252 -----------------------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el 289 (544)
......+||+.|+|||++. ..++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0011347999999999886 4589999999999999999
Q ss_pred hhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCC---ChhhhhCCCcccc
Q 009091 290 LSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI---TSAEVLEHPWMRE 356 (544)
Q Consensus 290 ~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~ell~hp~f~~ 356 (544)
++|+.||......+....+.........+....+++++.++|.+|+ .+|.+|+ ++.++++||||+.
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 9999999988776666666554444444444568999999999977 5999999 9999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-46 Score=377.40 Aligned_cols=260 Identities=32% Similarity=0.519 Sum_probs=222.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||.||+|.+..+++.+|+|++.+...........+.+|+.+++.+. ||||+++++++..++.+|+
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEE
Confidence 456999999999999999999999999999999986544333444566788999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++||+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 121 v~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccCC
Confidence 99999999999988654 68999999999999999999999999999999999999 445679999999998764332
Q ss_pred c--eecccCCccccCcccccc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 253 V--YRDIVGSAYYVAPEVLRR-----SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 253 ~--~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
. ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||........+..+......+..+....++.
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~ 276 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISK 276 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCH
Confidence 2 235679999999998853 278899999999999999999999998888788888776554444444446799
Q ss_pred HHHHHHHHhcccCcCC--CCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKK--RITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~ 357 (544)
.++++|.+||..++.+ |+++.++++||||+..
T Consensus 277 ~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 277 HAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 9999999999866544 8999999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-46 Score=371.08 Aligned_cols=250 Identities=28% Similarity=0.525 Sum_probs=218.7
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..++..||+|++.+...........+..|..++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999997654434445566778999998876799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
++|...+...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence 9999999888889999999999999999999999999999999999999 4455799999999876432 22334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||........+..+..+...++. .++.++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV----WLSKEAVSILKAFMTK 233 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhcc
Confidence 999999999886 46899999999999999999999999998888888888776544332 4789999999999999
Q ss_pred CcCCCC-------ChhhhhCCCcccc
Q 009091 338 DPKKRI-------TSAEVLEHPWMRE 356 (544)
Q Consensus 338 dp~~Rp-------s~~ell~hp~f~~ 356 (544)
||.+|+ ++.++++||||..
T Consensus 234 dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 999999 8999999999965
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=383.63 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=206.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc-----CCCCeeEEEEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS-----GQQNIVEFRGAY 164 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~ 164 (544)
....++|++.+.||+|+||+||+|.+..++..||||++... .........|+.+++.+. +|.+|+.+++++
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 33457899999999999999999999999999999998532 122344567888887775 245688999888
Q ss_pred EeC-CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCC---------
Q 009091 165 EDR-QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDG--------- 233 (544)
Q Consensus 165 ~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~--------- 233 (544)
... +++|||||++ |++|.+++...+.+++..++.++.||+.||.|||+ .|||||||||+|||+...+.
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 754 5789999998 77999999888889999999999999999999998 59999999999999965432
Q ss_pred ----CccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 009091 234 ----GAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ----~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i 308 (544)
...+||+|||.+..... .....+||+.|+|||++. ..++.++|||||||++|||++|+.||.+....+.+..+
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM 357 (467)
T ss_pred cCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 23599999998764322 234568999999999886 46999999999999999999999999877655444333
Q ss_pred HhCCccCCC-------------------------Cc-------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 309 LKGGVDFES-------------------------EP-------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 309 ~~~~~~~~~-------------------------~~-------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
......++. .+ ....++.+.+||.+||.+||.+|||++|+|+
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 221110000 00 0011456789999999999999999999999
Q ss_pred CCccccCC
Q 009091 351 HPWMREGG 358 (544)
Q Consensus 351 hp~f~~~~ 358 (544)
||||.+..
T Consensus 438 Hp~~~~~~ 445 (467)
T PTZ00284 438 HPYVLKYY 445 (467)
T ss_pred CccccccC
Confidence 99998754
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=369.39 Aligned_cols=255 Identities=27% Similarity=0.497 Sum_probs=222.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||+|+||.||+|.+..++..||+|++.+...........+..|..++..+.+|++|+.+++++...+.+++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 78899999999999999999999999999999765443444455677888888888779999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~ 254 (544)
|+++|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..... ....
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 4455799999999975432 2233
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
...+||+.|+|||++. ..++.++|||||||++|||++|..||.+.........+......++. .++.++.++|.+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~~ 234 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKG 234 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----cCCHHHHHHHHH
Confidence 4568999999999886 56899999999999999999999999988888888888776554433 478999999999
Q ss_pred hcccCcCCCCCh-----hhhhCCCccccC
Q 009091 334 MLIQDPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rps~-----~ell~hp~f~~~ 357 (544)
||+.||.+|+++ .++++||||+..
T Consensus 235 ~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 235 LMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 999999999985 799999999763
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-46 Score=370.66 Aligned_cols=250 Identities=27% Similarity=0.490 Sum_probs=212.0
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.++..+.+||||+++++++...+.+||||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455567889999999997799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc-cCCCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~ 258 (544)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++... .........+
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccccccccCCCcccccc
Confidence 99999998888999999999999999999999999999999999999994 4457999999998753 2233334568
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---------hHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET---------EKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
||+.|+|||++. ..++.++|||||||++|+|++|+.||.... .......+.......+ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 233 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence 999999999886 458999999999999999999999996321 1223444454443333 24789999
Q ss_pred HHHHHhcccCcCCCCC------hhhhhCCCcccc
Q 009091 329 DLVRKMLIQDPKKRIT------SAEVLEHPWMRE 356 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps------~~ell~hp~f~~ 356 (544)
++|.+||+.||.+|++ ++++++||||..
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999997 689999999965
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=362.70 Aligned_cols=254 Identities=26% Similarity=0.415 Sum_probs=209.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++++. ||||+++++++...+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEE
Confidence 35999999999999999999999999999999985432 1223456778999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+++ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcceeeccCCC
Confidence 999975 8998887654 478999999999999999999999999999999999994 4457999999998765432
Q ss_pred CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc---------------
Q 009091 252 KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD--------------- 314 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~--------------- 314 (544)
.......|++.|+|||++. ..++.++|||||||++|+|++|..||.+....+.+..+......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 2223457899999999875 35899999999999999999999999887766555444321110
Q ss_pred ----CCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 ----FES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 ----~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
++. .....+++++++||.+||++||.+|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 000 0012457889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=367.33 Aligned_cols=251 Identities=30% Similarity=0.514 Sum_probs=214.8
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..++..||+|++.+.........+.+..|..++..+.+||||+++++++...+.+++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999997654333444556677888887766799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......+
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCeECCCCCCcccccc
Confidence 99999998888899999999999999999999999999999999999994 445799999999976432 22334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+......++ ..++.++.+||.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER 233 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 999999999886 4589999999999999999999999998888777777765433322 24789999999999999
Q ss_pred CcCCCCChh-hhhCCCccccC
Q 009091 338 DPKKRITSA-EVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rps~~-ell~hp~f~~~ 357 (544)
||.+||++. ++++||||...
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 234 DPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CHHHcCCChHHHHcCcccCCC
Confidence 999999875 88899999763
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=366.81 Aligned_cols=251 Identities=27% Similarity=0.473 Sum_probs=215.1
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.++.++..||+|++.+...........+..|..++..+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999997654333344556778888888776699999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
++|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..... .......+
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccCCCceeccC
Confidence 99999998888899999999999999999999999999999999999994 445799999999875322 22334568
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......++ ..++.++++||.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLFER 233 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHccC
Confidence 999999999986 4689999999999999999999999998888777777765543332 24789999999999999
Q ss_pred CcCCCCCh-hhhhCCCccccC
Q 009091 338 DPKKRITS-AEVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rps~-~ell~hp~f~~~ 357 (544)
||.+||++ +++++||||+..
T Consensus 234 dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 234 DPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CHHHcCCChHHHHcCCCcCCC
Confidence 99999998 588999999763
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-46 Score=373.18 Aligned_cols=258 Identities=29% Similarity=0.470 Sum_probs=221.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+.+.||+|+||+||+|.+..++..||+|++.+...........+.+|+.+++.+. |+||+++++++.+.+.++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEEE
Confidence 4899999999999999999999999999999997654433445567889999999886 999999999999999999999
Q ss_pred eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++ ..+.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEeccCCCCeECCCCCc
Confidence 999999999999876 6799999999999999999999999999999999999994 456799999999987654322
Q ss_pred --eecccCCccccCccccc-------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 254 --YRDIVGSAYYVAPEVLR-------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 254 --~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.....||+.|+|||++. ..++.++|||||||++|+|++|..||........+..+.........+....++
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVS 237 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCC
Confidence 22347999999999874 347889999999999999999999998888777777776543323333334578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.+.+||.+||. ||.+||+++++++||||++.
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 999999999998 99999999999999999863
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-46 Score=371.82 Aligned_cols=249 Identities=31% Similarity=0.561 Sum_probs=217.1
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+||||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444445567788999999997 99999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCceecc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI 257 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~ 257 (544)
|+|..++...+.+++..++.++.||+.||.|||+ .||+||||||+|||++ .++.+||+|||++.... ........
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEecCCCCeecCCCCcccccc
Confidence 9999999888889999999999999999999997 7999999999999994 45579999999987543 22233446
Q ss_pred cCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcc
Q 009091 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336 (544)
Q Consensus 258 ~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 336 (544)
.||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+......++. .+++++.+||.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~ 232 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLK 232 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHhh
Confidence 7999999999885 56899999999999999999999999988877777777666554432 478999999999999
Q ss_pred cCcCCCC-----ChhhhhCCCcccc
Q 009091 337 QDPKKRI-----TSAEVLEHPWMRE 356 (544)
Q Consensus 337 ~dp~~Rp-----s~~ell~hp~f~~ 356 (544)
.||.+|+ ++.++++||||..
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 9999997 8999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=367.27 Aligned_cols=251 Identities=30% Similarity=0.542 Sum_probs=218.3
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||+||+|.+..++..||+|++.+...........+.+|+.+++.+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654434445667788999999887799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~ 258 (544)
++|..++...+.+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCCeecCcCCCccccee
Confidence 99999998888899999999999999999999999999999999999994 44579999999987532 222233457
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......++ ..++..+.+||.+||..
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK 233 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence 999999999886 4689999999999999999999999998887777777766554433 24789999999999999
Q ss_pred CcCCCCCh-----hhhhCCCccccC
Q 009091 338 DPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rps~-----~ell~hp~f~~~ 357 (544)
||.+||++ .++++||||+..
T Consensus 234 dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999999 999999999763
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=374.84 Aligned_cols=258 Identities=31% Similarity=0.538 Sum_probs=219.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.++..+. ||||+++++.+...+.+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEE
Confidence 4889999999999999999999999999999987544334445667889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccccc
Confidence 999999999999988889999999999999999999999999999999999999 445679999999987542210
Q ss_pred ----------------------------------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCC
Q 009091 253 ----------------------------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFW 297 (544)
Q Consensus 253 ----------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~ 297 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 011347999999999875 568999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC---hhhhhCCCccccC
Q 009091 298 AETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMREG 357 (544)
Q Consensus 298 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 357 (544)
..........+.........++...+++++++||.+|+ .||.+|++ ++++++||||+..
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence 88877777777654333333333457899999999987 49999995 7899999999863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=370.24 Aligned_cols=255 Identities=33% Similarity=0.571 Sum_probs=212.4
Q ss_pred ceecceecccCCeEEEEEEEC---CCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 96 YTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
|++.+.||+|+||.||+|++. .++..||+|++.+.... .....+.+.+|+.+++++.+|+||+++++++...+.++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 889999999999999998864 47899999998654322 22334567889999999987999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCcccccc
Confidence 9999999999999998888899999999999999999999999999999999999994 4457999999999765332
Q ss_pred --CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHhCCccCCCCcccCC
Q 009091 252 --KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 252 --~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
......+||+.|+|||++.+ .++.++|||||||++|||++|..||..... ......+......+ ...+
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 234 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF----PSFI 234 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC----CCCC
Confidence 22234679999999999864 478899999999999999999999964322 23333333332222 2357
Q ss_pred CHHHHHHHHHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 324 SDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
++.+.++|.+||..||++|| +++++++||||+..
T Consensus 235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 89999999999999999999 78899999999763
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-45 Score=363.75 Aligned_cols=251 Identities=27% Similarity=0.473 Sum_probs=214.5
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||+||+|.+..++..||+|++.+..............|..++..+.+||||+++++++...+.+++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999987654323334456677888888765699999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
|+|..++.....+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++..... ........
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCCCceeeec
Confidence 99999998888899999999999999999999999999999999999994 445799999999875422 22334567
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......++ ..++.+++++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR 233 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence 999999999886 4689999999999999999999999998887777777665543322 24789999999999999
Q ss_pred CcCCCCChh-hhhCCCccccC
Q 009091 338 DPKKRITSA-EVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rps~~-ell~hp~f~~~ 357 (544)
||.+||++. ++++||||++.
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 234 EPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CHhhcCCChHHHHcCcccCCC
Confidence 999999996 89999999774
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=366.97 Aligned_cols=256 Identities=30% Similarity=0.510 Sum_probs=229.1
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe-EEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS-VHL 172 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~-~~l 172 (544)
+.|.+++.+|+|+||.+++++++.++..+++|.+....... ..+....+|+.+++++. |||||.+.+.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 45899999999999999999999999999999997665433 33447789999999997 9999999999998888 999
Q ss_pred EEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+||+||+|.+.+...+ .++++.+..|+.|++.|+.|||+++|+|||||+.||+++.++ .|||+|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~---~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK---KVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC---ceeecchhhhhhcCC
Confidence 999999999999998754 489999999999999999999999999999999999996544 589999999999887
Q ss_pred CC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ...+.+||+.||+||++. .+|+.++|||||||++|||++-+.+|.+.+...+...|..+...... ..++.+++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp---~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP---SMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC---ccccHHHH
Confidence 65 667889999999999997 57999999999999999999999999999999999999888743222 35799999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+|+.||..+|..||++.+||.+|.+...
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 99999999999999999999999887643
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=361.88 Aligned_cols=255 Identities=29% Similarity=0.477 Sum_probs=209.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||+|+||.||+|+++.++..||+|++..... .....+.+.+|+.+++.+. ||||+++++++...+.+++||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEEE
Confidence 58999999999999999999999999999999865432 2344567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++++++..+......+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCcccccccccc
Confidence 9999877765554456799999999999999999999999999999999999994 44579999999998764322
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc------------------
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV------------------ 313 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~------------------ 313 (544)
......|++.|+|||++. ..++.++|||||||++|+|++|+.||.+.........+.....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 223457899999999875 4689999999999999999999999987665443332221100
Q ss_pred -cCCCC---------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 314 -DFESE---------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 314 -~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
..+.. ....++.++.+||.+||++||++|||++++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00000 011367889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=371.94 Aligned_cols=260 Identities=31% Similarity=0.479 Sum_probs=220.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||.||+|.+..++..+|+|++.+...........+.+|+.+++.+. ||||+++++++...+.+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEE
Confidence 356999999999999999999999999999999986544333444556788999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 121 v~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~~~~~~ 196 (371)
T cd05622 121 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKEG 196 (371)
T ss_pred EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeEcCcCC
Confidence 9999999999998865 4589999999999999999999999999999999999994 45579999999998765322
Q ss_pred --ceecccCCccccCcccccc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 253 --VYRDIVGSAYYVAPEVLRR-----SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 253 --~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.....+||+.|+|||++.. .++.++|||||||++|||++|..||........+..+......+..+....++.
T Consensus 197 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 276 (371)
T cd05622 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK 276 (371)
T ss_pred cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCH
Confidence 2235679999999998853 278899999999999999999999998888888888876554444444456899
Q ss_pred HHHHHHHHhcccCcCC--CCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKK--RITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~ 357 (544)
.++++|.+||..++.+ |++++++++||||+..
T Consensus 277 ~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 277 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 9999999999854443 7899999999999764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-45 Score=366.33 Aligned_cols=251 Identities=27% Similarity=0.490 Sum_probs=211.5
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455667888999998886799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~ 258 (544)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... .........
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 445579999999987542 222334568
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCC---------ChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAE---------TEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||... ........+......++ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~ 233 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence 999999999886 45889999999999999999999999521 11223344444444333 24789999
Q ss_pred HHHHHhcccCcCCCCCh------hhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITS------AEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~------~ell~hp~f~~~ 357 (544)
++|.+||..||.+||++ .++++||||+..
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 99999999999999984 799999999753
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-45 Score=365.20 Aligned_cols=253 Identities=29% Similarity=0.526 Sum_probs=215.8
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHH---hccCCCCeeEEEEEEEeCCeEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ---HLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~---~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
|++.+.||+|+||.||+|.+..++..||||++.+.........+.+.+|+.++. .+. ||||+++++++...+.+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~-hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER-HPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC-CCChhceeeEEEcCCEEEE
Confidence 678899999999999999999999999999997654333444566777777664 454 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-C
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-G 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~ 251 (544)
||||++|++|...+.. +.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..... .
T Consensus 80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEEeCcccCCccCCCCC
Confidence 9999999999887754 5799999999999999999999999999999999999994 445799999999875432 2
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......+|++.|+|||++. ..++.++|||||||++|+|++|..||.+.........+..+...++. .+++.+.++
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~l 231 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSREAISI 231 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHHH
Confidence 2334568999999999886 45889999999999999999999999988888888877776554332 478999999
Q ss_pred HHHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
|.+||..||.+|| ++.++++||||+..
T Consensus 232 i~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 232 MRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 9999999999999 68999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=369.21 Aligned_cols=259 Identities=29% Similarity=0.432 Sum_probs=216.9
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCC-----CCeeEEEEEEEe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-----QNIVEFRGAYED 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~~~~~ 166 (544)
+.-+|.+.+.||+|+||.|-+|++..|+..||||+++.. .....+...|+.+|.+|..| -|||+++++|..
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 344789999999999999999999999999999998543 34556667899999999733 589999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
.+++|||+|++. .+|+++++.+ ..++...++.++.||+.||.+||+.||||+||||+||||.+.... .|||+|||.
T Consensus 260 r~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~-~vKVIDFGS 337 (586)
T KOG0667|consen 260 RNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS-RIKVIDFGS 337 (586)
T ss_pred ccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC-ceeEEeccc
Confidence 999999999994 5999999875 458999999999999999999999999999999999999876654 899999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc----------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV---------- 313 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~---------- 313 (544)
|........ +++.+..|+|||++. .+|+.+.||||||||++||++|.+.|.+.++.+.+..|..-..
T Consensus 338 Sc~~~q~vy--tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 338 SCFESQRVY--TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred ccccCCcce--eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 988766443 788999999999875 6799999999999999999999999988887766655533100
Q ss_pred ----------------------------------------cCCCC----cc----c-CCCHHHHHHHHHhcccCcCCCCC
Q 009091 314 ----------------------------------------DFESE----PW----L-LISDSAKDLVRKMLIQDPKKRIT 344 (544)
Q Consensus 314 ----------------------------------------~~~~~----~~----~-~~~~~~~~li~~~l~~dp~~Rps 344 (544)
....+ .+ . .-...+.+||++||.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 00000 00 0 11346899999999999999999
Q ss_pred hhhhhCCCccccCC
Q 009091 345 SAEVLEHPWMREGG 358 (544)
Q Consensus 345 ~~ell~hp~f~~~~ 358 (544)
+.++|+||||+...
T Consensus 496 p~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 496 PAQALNHPFLTGTS 509 (586)
T ss_pred HHHHhcCccccccc
Confidence 99999999998543
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-45 Score=364.08 Aligned_cols=255 Identities=27% Similarity=0.504 Sum_probs=221.2
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|+..+.||+|+||+||+|.+..+++.||+|++.+.........+.+..|+.++..+.+|++|+.+++++...+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 67889999999999999999999999999998765433344456678899999988878899999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-Cce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~ 254 (544)
|++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...... ...
T Consensus 82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeccccccccCCCCccc
Confidence 999999999998888899999999999999999999999999999999999994 4457999999998764322 223
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
....||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+......++. .++.++.+++.+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~~ 234 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKG 234 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHHHHHHH
Confidence 3467999999999886 45899999999999999999999999988888888888776554432 478999999999
Q ss_pred hcccCcCCCCCh-----hhhhCCCccccC
Q 009091 334 MLIQDPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rps~-----~ell~hp~f~~~ 357 (544)
||+.||.+|+++ +++++||||...
T Consensus 235 ~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 235 LMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 999999999984 689999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-45 Score=357.58 Aligned_cols=258 Identities=30% Similarity=0.511 Sum_probs=214.6
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||+|+||+||++.+..++..||+|++.............+.+|+.+++++. ||||+.+++++..++.+++|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEEe
Confidence 788899999999999999999999999999986544333333456778999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ ..+.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEeeCCCceecCCCCc
Confidence 99999999888654 4589999999999999999999999999999999999994 445799999999987654444
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....|++.|+|||++. ..++.++||||+||++|+|++|..||.+.........+..............+++.+.+||.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR 237 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence 44568999999999885 55889999999999999999999999876554333332221111112222357899999999
Q ss_pred HhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 333 KMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+||..||.+|| +++++++||||.+.
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 238 QLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 99999999999 89999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-45 Score=360.20 Aligned_cols=257 Identities=25% Similarity=0.379 Sum_probs=206.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+. ||||+++++++......++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEEE
Confidence 469999999999999999999999999999999854321 222345678999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+. ++|.+++... +.+++..++.++.|++.||.|||+.||+||||||+|||++ ..+.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKLADFGLARAKSVPS 157 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECCCCcceeccCCC
Confidence 99996 5788877654 5689999999999999999999999999999999999994 4457999999998754322
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCcc--------------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVD-------------- 314 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~-------------- 314 (544)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... ..+..+......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 22334578999999998753 4788999999999999999999999875432 222222110000
Q ss_pred CCCC--------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 315 FESE--------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 315 ~~~~--------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+... ....+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 0000 001245788999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-45 Score=363.79 Aligned_cols=250 Identities=36% Similarity=0.621 Sum_probs=214.7
Q ss_pred ceecccCCeEEEEEEEC---CCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 100 KELGRGQFGITYLCTEN---STGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+++.+. ||||+++++++..++.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 67999999999999864 47889999998654321 2233456788999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~ 254 (544)
|++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence 99999999999988889999999999999999999999999999999999999 4456799999999875432 2223
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
....||+.|+|||++. ..++.++|||||||++|||++|..||...........+..+....+. .+++.+.+||.+
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~ 233 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP----YLTPEARDLLKK 233 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHH
Confidence 3457999999999886 45889999999999999999999999988877777777776554332 478999999999
Q ss_pred hcccCcCCCC-----ChhhhhCCCccccC
Q 009091 334 MLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
||.+||.+|| +++++++||||+..
T Consensus 234 ~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 234 LLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999 89999999999763
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-45 Score=364.08 Aligned_cols=249 Identities=30% Similarity=0.552 Sum_probs=212.3
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ-IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
+.||+|+||+||+|.+..+++.||+|++.+...........+..|.. +++.+. ||||+++++++...+.+++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 46999999999999999999999999987654333333445556655 456676 9999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceecc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI 257 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~ 257 (544)
+|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCCCcccccCCCccccc
Confidence 999999998888899999999999999999999999999999999999994 455799999999875432 2233456
Q ss_pred cCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcc
Q 009091 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336 (544)
Q Consensus 258 ~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 336 (544)
+||+.|+|||++. ..++.++|||||||++|+|++|..||...........+........ ..++..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (323)
T cd05575 157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQ 232 (323)
T ss_pred cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 7999999999886 4589999999999999999999999998888788877776654433 2468999999999999
Q ss_pred cCcCCCCCh----hhhhCCCcccc
Q 009091 337 QDPKKRITS----AEVLEHPWMRE 356 (544)
Q Consensus 337 ~dp~~Rps~----~ell~hp~f~~ 356 (544)
.||.+||++ .++++||||..
T Consensus 233 ~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred cCHHhCCCCCCCHHHHHcCCCcCC
Confidence 999999998 59999999975
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-45 Score=365.93 Aligned_cols=260 Identities=28% Similarity=0.422 Sum_probs=209.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----Ce
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR-----QS 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~ 169 (544)
+|++.+.||+|+||.||+|.+..++..||||++.... ........+.+|+.++++++ ||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCce
Confidence 4899999999999999999999999999999885322 22233456889999999997 99999999987543 35
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 899999995 6899999888889999999999999999999999999999999999999 445679999999997643
Q ss_pred CCC----ceecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh------------
Q 009091 250 EGK----VYRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------ 310 (544)
Q Consensus 250 ~~~----~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~------------ 310 (544)
... ......||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.........+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 221 123457999999999875 4688999999999999999999999977654332221111
Q ss_pred ---------------CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 311 ---------------GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 311 ---------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
............+++.+.++|.+||+.||++|||++++|+||||+.....
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~ 299 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKV 299 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcc
Confidence 00000001122467889999999999999999999999999999875443
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=361.45 Aligned_cols=259 Identities=25% Similarity=0.358 Sum_probs=215.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..++..+|+|++.... .......+.+|+++++.+. ||||+++++++...+.+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEE
Confidence 356999999999999999999999999999999886432 2344567899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccccccccc
Confidence 999999999999998888899999999999999999999986 699999999999994 4457999999998766432
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc-----------------
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV----------------- 313 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~----------------- 313 (544)
......||+.|+|||++. ..++.++|||||||++|||++|+.||......++...+.....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 223457999999999886 4589999999999999999999999976554433222111000
Q ss_pred ---------------------------cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 314 ---------------------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 314 ---------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..+..+...+++++++||.+||.+||++|||+.++|+||||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 000111124678999999999999999999999999999998653
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-46 Score=359.92 Aligned_cols=261 Identities=35% Similarity=0.627 Sum_probs=236.6
Q ss_pred cccccee--cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 92 IRQFYTL--GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 92 ~~~~y~~--~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+..-|++ .+.||+|.||+||-|.++.+|+.||||+|.+.++...+ ...+.+|+++|+.+. ||.||.+...|+..+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~-HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLH-HPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcC-CCCeeEEEEeecCCce
Confidence 3444665 46899999999999999999999999999988775544 478999999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 170 VHLVMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+++|||-+.| ++.+.+.. .+++++...+.++.||+.||.|||.++|+|+||||+|||+...+.-..+||||||+|+.
T Consensus 638 vFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 638 VFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred EEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 9999999965 66666643 57899999999999999999999999999999999999998877667899999999999
Q ss_pred ccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
+.+.....+.+|||.|+|||+++ +.|+..-|+||.||++|--+.|..||.. ++++-+.|....+.++..+|..++++
T Consensus 717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~eis~~ 794 (888)
T KOG4236|consen 717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSEISPE 794 (888)
T ss_pred cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhhcCHH
Confidence 99988888899999999999996 5699999999999999999999999964 45577788889999999999999999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.+||..+|+..-.+|.|.+..|.|||++..
T Consensus 795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 9999999999999999999999999999875
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=362.51 Aligned_cols=251 Identities=26% Similarity=0.480 Sum_probs=212.1
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++.++.+||||+.+++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997655444455667889999999997799999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~ 258 (544)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCCCCceeccc
Confidence 99999998888899999999999999999999999999999999999994 44579999999987532 233344568
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET-------EKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
||+.|+|||++. ..++.++|||||||++|+|++|..||.... .......+......++ ..++..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l 233 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV 233 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 999999999885 568999999999999999999999996421 1223344444333322 2478999999
Q ss_pred HHHhcccCcCCCCCh------hhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRITS------AEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rps~------~ell~hp~f~~~ 357 (544)
|.+||..||.+|+++ +++++||||+..
T Consensus 234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999999999999985 699999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=340.58 Aligned_cols=256 Identities=31% Similarity=0.572 Sum_probs=237.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|..++.||+|.||+|-+|+.+.+++.+|+|++++...........-..|-++|+..+ ||.+..+-..|...+++|+|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEEE
Confidence 45888999999999999999999999999999999888877778888889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc-ccCCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF-IDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~-~~~~~ 252 (544)
|||..||.|.-.|.+.+.+++...+.+..+|+.||.|||+++||+||||.+|.|+ +.+++|||+|||+++. +..+.
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 6677899999999986 44566
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
...++||||.|+|||++. ..|+.++|.|.+||++|||++|+.||++.....++..|+.....++. .++++++.|+
T Consensus 324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAktLL 399 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAKTLL 399 (516)
T ss_pred eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHHHHH
Confidence 677899999999999997 56999999999999999999999999999999999999998888876 4899999999
Q ss_pred HHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 332 RKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
..+|.+||.+|. .+.|+.+|+||...
T Consensus 400 sGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 400 SGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 999999999998 47899999999753
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-45 Score=367.90 Aligned_cols=250 Identities=31% Similarity=0.554 Sum_probs=213.4
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
||+|+||+||+|++..++..||+|++.+..............|..++.++. +||||+.+++++...+.+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999986544333333445556777776654 699999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceeccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~ 258 (544)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999998888899999999999999999999999999999999999994 445799999999875432 22334567
Q ss_pred CCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcc
Q 009091 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336 (544)
Q Consensus 259 gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 336 (544)
||+.|+|||++.+ .++.++|||||||++|+|++|..||........+..+..+...++.. .+++++.+||.+||.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~li~~~L~ 234 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN---VLSDEGRQFVKGLLN 234 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc---cCCHHHHHHHHHHcC
Confidence 9999999998853 47899999999999999999999999888877777777665554432 478999999999999
Q ss_pred cCcCCCC----ChhhhhCCCccccC
Q 009091 337 QDPKKRI----TSAEVLEHPWMREG 357 (544)
Q Consensus 337 ~dp~~Rp----s~~ell~hp~f~~~ 357 (544)
.||.+|| ++.++++||||+..
T Consensus 235 ~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 235 RNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCHHHCCCCCCCHHHHhcCccccCC
Confidence 9999998 68999999999753
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=354.65 Aligned_cols=252 Identities=29% Similarity=0.479 Sum_probs=206.0
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||+|+||+||+|.+..+++.||+|.+.+.........+.+..|+.+++.+. |+||+++.+++...+.+++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 799999999999999999999999986654433344466788999999996 9999999999999999999999999999
Q ss_pred hHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-ceec
Q 009091 182 LFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VYRD 256 (544)
Q Consensus 182 L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~ 256 (544)
|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... ....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCccceecCCCCccccc
Confidence 9887743 34589999999999999999999999999999999999994 45579999999997664432 2234
Q ss_pred ccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhc
Q 009091 257 IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335 (544)
Q Consensus 257 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l 335 (544)
..||+.|+|||++. ..++.++|||||||++|+|++|+.||...........+..............+++.+.+++.+||
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL 236 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence 57999999999886 56889999999999999999999999765432222122111111111222357899999999999
Q ss_pred ccCcCCCC-----ChhhhhCCCccccC
Q 009091 336 IQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 336 ~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+.||.+|| +++++++||||+..
T Consensus 237 ~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 237 AKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred cCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 99999999 78999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=366.46 Aligned_cols=258 Identities=20% Similarity=0.366 Sum_probs=208.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
...|.+.+.||+|+||.||+|.+..+++.||+|... ...+.+|+.++++|. ||||+++++++......++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEE
Confidence 356999999999999999999999999999999642 234678999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||++. ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++......
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCccccccccc
Confidence 999995 68999998888899999999999999999999999999999999999994 4457999999999754321
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHhCC----------
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET-------EKGIFDAILKGG---------- 312 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~-------~~~~~~~i~~~~---------- 312 (544)
......+||+.|+|||++. ..++.++|||||||++|||++|..||.... ....+..+....
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 2233468999999999885 468999999999999999999998876432 111111111100
Q ss_pred ----------------cc--CCCCcc---cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 313 ----------------VD--FESEPW---LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 313 ----------------~~--~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
.. ...+.+ ..++.++.+||.+||+.||.+|||++|+|+||||++...+.+.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~~ 389 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPNP 389 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCCC
Confidence 00 000111 12466899999999999999999999999999999876554443
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=354.56 Aligned_cols=256 Identities=26% Similarity=0.374 Sum_probs=206.7
Q ss_pred ccceecceecccCCeEEEEEEECC-CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEE-----
Q 009091 94 QFYTLGKELGRGQFGITYLCTENS-TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYE----- 165 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~----- 165 (544)
++|++.+.||+|+||+||+|.+.. ++..||+|++..... .......+.+|+.+++.+. +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 359999999999999999999854 467899998864332 2223345667888887764 4999999999885
Q ss_pred eCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
....+++||||+. ++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg 155 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFG 155 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEcccc
Confidence 3456899999996 5898888753 4589999999999999999999999999999999999994 44579999999
Q ss_pred CcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC----
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE---- 318 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~---- 318 (544)
++.............||+.|+|||++. ..++.++|||||||++|||++|..||.+....+.+..+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred ceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 998765544444567999999999875 568999999999999999999999999887776666654321100000
Q ss_pred -------------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 319 -------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 319 -------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
....+++.+++||.+||+.||++|||+.++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 012467888999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=361.31 Aligned_cols=259 Identities=27% Similarity=0.488 Sum_probs=216.2
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||++++..+++.||+|++.+.........+.+.+|+.++..+. |+||+.+++++...+.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEEE
Confidence 5899999999999999999999999999999986544333445566889999999986 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEEEECCceeecCCCCC
Confidence 99999999999976 45799999999999999999999999999999999999994 455799999999876544322
Q ss_pred e--ecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC-cccCCC
Q 009091 254 Y--RDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE-PWLLIS 324 (544)
Q Consensus 254 ~--~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~ 324 (544)
. ....||+.|+|||++. +.++.++|||||||++|+|++|+.||...........+......+..+ ....++
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 237 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVS 237 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCC
Confidence 1 2346999999999885 347889999999999999999999998887777666665543222222 223478
Q ss_pred HHHHHHHHHhcccCcCC--CCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKK--RITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~ 357 (544)
+.++++|.+||..++.+ |+++.++++||||...
T Consensus 238 ~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 238 EEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 99999999998764444 8899999999999753
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-45 Score=376.02 Aligned_cols=255 Identities=25% Similarity=0.388 Sum_probs=206.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR----- 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----- 167 (544)
.++|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.+. ||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcC-CCCCcceeeeEeecccccC
Confidence 356999999999999999999999999999999884321 23457999999997 99999998876432
Q ss_pred ---CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 168 ---QSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
..+++||||+++ +|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++..+ ..+||+
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~--~~vkL~ 213 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT--HTLKLC 213 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC--Cceeee
Confidence 257799999975 77766643 45699999999999999999999999999999999999995432 369999
Q ss_pred ecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC------
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG------ 312 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~------ 312 (544)
|||+|+............||+.|+|||++.+ .++.++|||||||++|||++|.+||.+......+..+....
T Consensus 214 DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 214 DFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred ccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 9999987765544456789999999998753 58999999999999999999999998877655544443211
Q ss_pred -----------ccCCCC--------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 313 -----------VDFESE--------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 313 -----------~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..++.. .....++++++||.+||.+||.+|||+.|+|+||||....
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 001100 0113578999999999999999999999999999998654
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=361.43 Aligned_cols=249 Identities=28% Similarity=0.535 Sum_probs=212.0
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHH-HHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI-MQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~-l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
+.||+|+||+||+|.+..+|..+|+|++.+...........+..|..+ ++.+. ||||+++++++...+.+++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence 469999999999999999999999999876543333444556666654 55665 9999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceecc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI 257 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~ 257 (544)
|++|..++...+.+++..+..++.||+.||+|||+.||+||||||+|||++ .++.+||+|||++..... .......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCCcccCCCCCCCcccc
Confidence 999999998888899999999999999999999999999999999999994 445799999999875432 2233456
Q ss_pred cCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcc
Q 009091 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336 (544)
Q Consensus 258 ~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 336 (544)
+||+.|+|||++. ..++.++|||||||++|+|++|..||........+..+........ ..++..+.++|.+||.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232 (325)
T ss_pred cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhc
Confidence 7999999999886 4589999999999999999999999998887777777776544332 2478899999999999
Q ss_pred cCcCCCCChh----hhhCCCcccc
Q 009091 337 QDPKKRITSA----EVLEHPWMRE 356 (544)
Q Consensus 337 ~dp~~Rps~~----ell~hp~f~~ 356 (544)
.||.+||++. ++++||||..
T Consensus 233 ~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 233 KDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred cCHHhcCCCCCCHHHHhcCCCcCC
Confidence 9999999874 8999999975
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=356.09 Aligned_cols=244 Identities=27% Similarity=0.433 Sum_probs=210.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
++.+++++.||+|-||.||+|.+.. ...||+|.++... ...+.|.+|+++|++|+ |++||+++++|..++.+||
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~----m~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS----MSPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc----cChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEE
Confidence 4457889999999999999999874 3479999886542 34467889999999998 9999999999999889999
Q ss_pred EEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||+.|+|.++|+. ...+.....+.++.||++|++||+++++|||||-.+|||| +.+..+||+|||+|+.+.+
T Consensus 279 VtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCC
Confidence 9999999999999987 4568999999999999999999999999999999999999 5556899999999995544
Q ss_pred CCceecccC---CccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 GKVYRDIVG---SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~~~~~~~~g---t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
+.. ....| ...|.|||.+. +.++.+||||||||+||||+| |+.||.+.+..+.++.+.+| +..+.|. .+|+
T Consensus 356 ~~Y-~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G-yRlp~P~--~CP~ 431 (468)
T KOG0197|consen 356 DEY-TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG-YRLPRPE--GCPD 431 (468)
T ss_pred Cce-eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc-CcCCCCC--CCCH
Confidence 332 22222 45799999986 679999999999999999999 89999999999999887766 4455443 6899
Q ss_pred HHHHHHHHhcccCcCCCCChhhhh
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell 349 (544)
++.+++..||..+|++|||++.+.
T Consensus 432 ~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 432 EVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999999998653
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-45 Score=326.20 Aligned_cols=256 Identities=27% Similarity=0.376 Sum_probs=219.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
...+..||+|+.|.||+++.+.+|...|||.+.+. ......+++...+.++....++|+||+++|+|..+..++|.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 34556799999999999999999999999988654 3566678888999988887779999999999999999999999
Q ss_pred ccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
.|.- .+..++++ .++++|..+-.+...++.||.||.+ +||+|||+||+|||+ +..++|||||||++..+.+...
T Consensus 172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecccc
Confidence 9953 45455544 5679999999999999999999975 599999999999999 6677899999999998888777
Q ss_pred eecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.....|.+.|||||.+. ..|+-++||||||+.|+||.||..||.+. .+-+.+-.++.... ...+.....|+.++
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQ 326 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHH
Confidence 77789999999999885 34899999999999999999999999875 44566777776544 23333445899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+|+..||++|+.+||...+||+|||++.+.
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 999999999999999999999999998774
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=359.03 Aligned_cols=249 Identities=28% Similarity=0.535 Sum_probs=210.5
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ-IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
+.||+|+||+||+|.+..++..||+|++.+...........+..|.. +++.+. ||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36999999999999999999999999987544322333344455554 456675 9999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceecc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI 257 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~ 257 (544)
|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCCCCcccc
Confidence 999999998888899999999999999999999999999999999999994 445799999999875432 2233456
Q ss_pred cCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcc
Q 009091 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336 (544)
Q Consensus 258 ~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 336 (544)
+||+.|+|||++. ..++.++|||||||++|+|++|..||......+.+..+......+. ..+++.+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQ 232 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC----CCCCHHHHHHHHHHcc
Confidence 7999999999886 4588999999999999999999999998888887777766544332 3578999999999999
Q ss_pred cCcCCCCChh----hhhCCCcccc
Q 009091 337 QDPKKRITSA----EVLEHPWMRE 356 (544)
Q Consensus 337 ~dp~~Rps~~----ell~hp~f~~ 356 (544)
.||.+|+++. ++++|+||..
T Consensus 233 ~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 233 KDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred cCHHHCCCCCCCHHHHhcCcccCC
Confidence 9999999987 8999999964
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=350.66 Aligned_cols=255 Identities=31% Similarity=0.531 Sum_probs=211.8
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.++++++ |++|+.+++.+...+.+++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEEE
Confidence 677889999999999999999999999999986554333334456778999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ ....++|+|||++........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCCcc
Confidence 99999999888653 3589999999999999999999999999999999999994 445799999999976654444
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH---HHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK---GIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.....|+..|+|||++. ..++.++|||||||++|+|++|..||...... .....+.... .......+++++.+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 234 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---QEEYSEKFSPDARS 234 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---hhhcCccCCHHHHH
Confidence 34557999999999885 55899999999999999999999999865432 1222222211 11122357889999
Q ss_pred HHHHhcccCcCCCCC-----hhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
||.+||+.||.+||| ++++++||||++.
T Consensus 235 li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 235 LCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 999999999999999 8999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-44 Score=358.27 Aligned_cols=258 Identities=26% Similarity=0.467 Sum_probs=216.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||++.++.++..+|+|++.+...........+.+|+.++..+. |+||+.+++++...+.+++||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEEE
Confidence 5899999999999999999999999999999986543333334456788999999986 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++|+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEeecchheecccCCc
Confidence 99999999999987 46789999999999999999999999999999999999994 455799999999876543222
Q ss_pred --eecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc-ccCCC
Q 009091 254 --YRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP-WLLIS 324 (544)
Q Consensus 254 --~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~ 324 (544)
....+||+.|+|||++. ..++.++|||||||++|||++|+.||........+..+.........+. ...++
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s 237 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVS 237 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCC
Confidence 22357999999999874 3478899999999999999999999998887777777766543332222 23579
Q ss_pred HHHHHHHHHhcccCcCC--CCChhhhhCCCcccc
Q 009091 325 DSAKDLVRKMLIQDPKK--RITSAEVLEHPWMRE 356 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~ 356 (544)
+++++||++||..++.+ |++++++++||||..
T Consensus 238 ~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 238 EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 99999999999765554 789999999999975
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-44 Score=357.66 Aligned_cols=249 Identities=29% Similarity=0.537 Sum_probs=210.8
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ-IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
+.||+|+||.||+|++..++..||+|++.+...........+.+|.. +++.+. ||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999999999999999987654333333445556655 566776 9999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceecc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI 257 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~ 257 (544)
|++|...+.....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..... .......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCCCccCCCCCCccccc
Confidence 999999998888899999999999999999999999999999999999994 455799999999875322 2223456
Q ss_pred cCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcc
Q 009091 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336 (544)
Q Consensus 258 ~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 336 (544)
+||+.|+|||++. ..++.++|||||||++|||++|..||...........+.......+. ..+..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~ 232 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPG----GKTVAACDLLVGLLH 232 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHcc
Confidence 7999999999886 45899999999999999999999999988877777777765443332 468899999999999
Q ss_pred cCcCCCCChh----hhhCCCcccc
Q 009091 337 QDPKKRITSA----EVLEHPWMRE 356 (544)
Q Consensus 337 ~dp~~Rps~~----ell~hp~f~~ 356 (544)
.||.+|+++. ++++|+||..
T Consensus 233 ~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 233 KDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CCHhhcCCCCCCHHHHhCCCCcCC
Confidence 9999999864 9999999964
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=359.91 Aligned_cols=249 Identities=31% Similarity=0.540 Sum_probs=214.3
Q ss_pred ceecccCCeEEEEEEE---CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 100 KELGRGQFGITYLCTE---NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
+.||+|+||.||++++ ..++..||+|++.+... .......+.+|+.+++++. ||||+++++++...+.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999886 35789999999965432 2233456778999999997 99999999999999999999999
Q ss_pred cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-Ccee
Q 009091 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYR 255 (544)
Q Consensus 177 ~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~~ 255 (544)
+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCCcccCCCCCcee
Confidence 99999999998888899999999999999999999999999999999999994 4457999999998865443 2334
Q ss_pred cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHh
Q 009091 256 DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334 (544)
Q Consensus 256 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 334 (544)
...||+.|+|||++. ..++.++|||||||++|+|++|+.||...........+.......+. .+++.+.+||.+|
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~ 232 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRAL 232 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHH
Confidence 568999999999886 45889999999999999999999999988877777777766554332 4789999999999
Q ss_pred cccCcCCCCC-----hhhhhCCCccccC
Q 009091 335 LIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 335 l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
|+.||.+||+ +.+++.||||...
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 9999999999 5679999999753
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=358.11 Aligned_cols=258 Identities=26% Similarity=0.462 Sum_probs=217.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..+. |+||+.+++++...+..|+||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEE
Confidence 5899999999999999999999999999999986543333344556788999999887 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||++||+|.+++.. ...+++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccceeeccCCCc
Confidence 99999999999987 46789999999999999999999999999999999999994 445799999999987654322
Q ss_pred e--ecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC-cccCCC
Q 009091 254 Y--RDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE-PWLLIS 324 (544)
Q Consensus 254 ~--~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~ 324 (544)
. ....||+.|+|||++. +.++.++|||||||++|+|++|+.||........+..+......++.+ ....++
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~ 237 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVS 237 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCC
Confidence 2 2357999999999875 357889999999999999999999999887777777776544333222 223578
Q ss_pred HHHHHHHHHhcccCcCC--CCChhhhhCCCcccc
Q 009091 325 DSAKDLVRKMLIQDPKK--RITSAEVLEHPWMRE 356 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~ 356 (544)
++++++|.+||..++.+ |++++++++||||+.
T Consensus 238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 238 EEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred HHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 99999999999976655 568999999999975
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=346.55 Aligned_cols=249 Identities=30% Similarity=0.504 Sum_probs=205.9
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||+|+||.||++.++.+|+.||+|++.............+..|+++++++. ||||+++++++..+..+++||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999986543333333445567999999996 9999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccC
Q 009091 182 LFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259 (544)
Q Consensus 182 L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g 259 (544)
|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++ .+..++|+|||++.............|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCceeeccCC
Confidence 998886543 488899999999999999999999999999999999994 445799999999987765544445679
Q ss_pred CccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH----HHHHHHHhCCccCCCCcccCCCHHHHHHHHHh
Q 009091 260 SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK----GIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334 (544)
Q Consensus 260 t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 334 (544)
++.|+|||++. ..++.++|||||||++|+|++|..||...... .............. ...+++++++||.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~ 233 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE---HQNFTEESKDICRLF 233 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc---cccCCHHHHHHHHHH
Confidence 99999999875 45899999999999999999999999764332 22333333222221 235789999999999
Q ss_pred cccCcCCCCCh----hhhhCCCccccC
Q 009091 335 LIQDPKKRITS----AEVLEHPWMREG 357 (544)
Q Consensus 335 l~~dp~~Rps~----~ell~hp~f~~~ 357 (544)
|++||.+||++ ++++.||||+..
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcCC
Confidence 99999999999 667899999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=346.87 Aligned_cols=258 Identities=31% Similarity=0.521 Sum_probs=215.4
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|+..+.||.|+||+||+|.+..+++.+|+|.+.+...........+.+|+.++++++ |+||+.+++++..++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEEE
Confidence 677789999999999999999999999999986654433344456788999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .+..++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCCCc
Confidence 99999999888653 3599999999999999999999999999999999999994 445799999999976654433
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....|+..|+|||++. ..++.++|+|||||++|+|++|..||...........+..............++.++.+|+.
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK 237 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence 34567999999999875 56899999999999999999999999876654443333322222222222357889999999
Q ss_pred HhcccCcCCCCC-----hhhhhCCCccccC
Q 009091 333 KMLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
+||+.||.+||+ +.+++.|+||+..
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 999999999999 8899999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=354.99 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=212.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||.|+||.||+|.+..++..+|+|++.... .......+.+|+++++.+. ||||+++++++...+.+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEE
Confidence 456999999999999999999999999999999875432 2334567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcchhhhhh
Confidence 999999999999998888899999999999999999999975 799999999999994 4457999999998765432
Q ss_pred CceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH----------------------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI---------------------- 308 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i---------------------- 308 (544)
......|+..|+|||++.+ .++.++|+|||||++|+|++|+.||...........+
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence 2234579999999998864 5889999999999999999999999765443322111
Q ss_pred ----------------------HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 309 ----------------------LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 309 ----------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..... +..+...++.++++||.+||++||++|||+.+++.||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 00000 000111357889999999999999999999999999999865
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=347.61 Aligned_cols=255 Identities=27% Similarity=0.420 Sum_probs=205.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe-----C
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYED-----R 167 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~-----~ 167 (544)
+|++.+.||+|+||+||+|.+..+++.||+|.+..... .......+.+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN-EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC-CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 48899999999999999999999999999998865322 1222334567888887764 49999999998764 3
Q ss_pred CeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
..+++||||+.+ +|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcc
Confidence 468999999975 888888764 3489999999999999999999999999999999999994 4457999999999
Q ss_pred ccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc-----------
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV----------- 313 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~----------- 313 (544)
.............||..|+|||++. ..++.++|||||||++|+|++|..||.+......+..+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 8765544444567899999999875 5689999999999999999999999987766655544432100
Q ss_pred c-----CC-------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 314 D-----FE-------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 314 ~-----~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. +. ......++..+.++|.+||++||.+|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 00 00112467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=357.10 Aligned_cols=259 Identities=28% Similarity=0.451 Sum_probs=207.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 167 (544)
.+.++|++.+.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCc
Confidence 34567999999999999999999999999999999986442 23344567789999999997 99999999998644
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+|+||||+.+ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~---~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEecCCC
Confidence 357999999965 6666653 3588999999999999999999999999999999999994 455799999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh-------------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------- 310 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~------------- 310 (544)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+..
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 98665444444568899999999886 4689999999999999999999999987654332222111
Q ss_pred ---------CCccCCC----------------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 311 ---------GGVDFES----------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 311 ---------~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.....+. ......++.+++||.+||..||.+|||+.|+|+||||...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 1111000 0011236789999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=351.97 Aligned_cols=258 Identities=27% Similarity=0.410 Sum_probs=210.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||+|+||.||+|++..++..||+|.+..... ......+.+|+.++++++ ||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEE
Confidence 459999999999999999999999999999999864432 223345778999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+++ +|.+++...+ .++...++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccceecCCCc
Confidence 999975 8888876654 488999999999999999999999999999999999994 44579999999987654322
Q ss_pred -ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc----------------
Q 009091 253 -VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV---------------- 313 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~---------------- 313 (544)
......+++.|+|||++. ..++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 223457899999999875 3578999999999999999999999987766554444332110
Q ss_pred ---cCCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 314 ---DFES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 314 ---~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.++. .....+++++++||.+||..||.+|||+.|+|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0000 01124688999999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=363.47 Aligned_cols=258 Identities=26% Similarity=0.446 Sum_probs=222.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|.++-.||.|+||.||+|..+.++-..|.|+|. ..+....+.+.-||.+|..+. ||+||++++.|...+.+||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIe---tkseEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwi 106 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIE---TKSEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWI 106 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhc---ccchhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEE
Confidence 456889999999999999999999999888999883 345677888999999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE- 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~- 250 (544)
+.|||.||-...++.. .+.+++..+..+++|++.||.|||+++|||||||..|||++-+ +.|+|+|||.+.....
T Consensus 107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld---GdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD---GDIRLADFGVSAKNKST 183 (1187)
T ss_pred EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec---CcEeeecccccccchhH
Confidence 9999999998877765 5669999999999999999999999999999999999999654 4699999999765432
Q ss_pred CCceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 251 GKVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.....+++|||+|||||++. .+|++++||||||++|.||..+.+|-...+....+-.|.+...+-... ...++
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlq-PS~Ws 262 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQ-PSHWS 262 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccC-cchhh
Confidence 23345689999999999873 469999999999999999999999998887777666666554332222 23578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..|.||+++||.+||..||++++||+||||....
T Consensus 263 ~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 263 RSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred hHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 8999999999999999999999999999998653
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=368.58 Aligned_cols=253 Identities=27% Similarity=0.448 Sum_probs=216.6
Q ss_pred ccceecceecccCCeEEEEEEECCC-CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENST-GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
..|.+.+.||+|++|.||+|.+..+ +..||+|.+... .......+.+|+.+++.+. ||||+++++++...+.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEE
Confidence 3499999999999999999998877 778888876332 3344556788999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 173 VMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCceec
Confidence 9999999999987754 34689999999999999999999999999999999999994 4457999999999876
Q ss_pred cCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 249 DEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 249 ~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.... .....+||+.|+|||++. ..++.++|||||||++|+|++|..||......+.+..+..+.... ....++
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~s 296 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP---FPCPVS 296 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---CCccCC
Confidence 5432 233467999999999886 458999999999999999999999999888877777777654432 123578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+.++++|.+||..||.+||+++++|.|+|++.
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 99999999999999999999999999999865
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=345.68 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=204.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.++||+||.+.||++.... .+.||+|++.... ...+....+.+|+.+|.+|.+|.+|+++++|-..++.+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 3459999999999999999998654 4566666654332 2456678899999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||-+ .+|..+|..... ++.-.++.+..|+|.|+.++|+.||||.||||.|+|+.. +.+||+|||+|..+...
T Consensus 438 vmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk----G~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK----GRLKLIDFGIANAIQPD 512 (677)
T ss_pred Eeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe----eeEEeeeechhcccCcc
Confidence 999974 599999987655 444688999999999999999999999999999999954 47999999999987654
Q ss_pred Cc---eecccCCccccCcccccc------------cCCCcchHHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHhCCccC
Q 009091 252 KV---YRDIVGSAYYVAPEVLRR------------SYGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFDAILKGGVDF 315 (544)
Q Consensus 252 ~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~~l~el~tg~~pf~~~~-~~~~~~~i~~~~~~~ 315 (544)
.. ..+.+||+.||+||.+.. ..++++|||||||+||+|+.|+.||..-. .-.-+..|.......
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEI 592 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccc
Confidence 32 245799999999998731 15789999999999999999999996433 222233444332222
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+.+... -..++.++++.||..||.+||++.+||+|||++-
T Consensus 593 efp~~~-~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 593 EFPDIP-ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred cccCCC-CchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 222111 1234999999999999999999999999999865
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=380.47 Aligned_cols=266 Identities=30% Similarity=0.528 Sum_probs=218.2
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-- 166 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 166 (544)
.+.....|.+++.||.|+||+||+|.+..++..+|+|++..... .......+..|+.+++.|. |||||+++++|..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKA 85 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecC
Confidence 34445679999999999999999999999999999998865432 3344577889999999998 9999999998854
Q ss_pred CCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-------CCEeecCCCCceeeecC----
Q 009091 167 RQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFM-------GVMHRDLKPENFLLSNK---- 231 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~-------~ivHrDikp~Nill~~~---- 231 (544)
...+||||||+++++|.++|.. ...+++..++.|+.||+.||.|||+. +||||||||+||||...
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 4579999999999999998865 35699999999999999999999985 49999999999999642
Q ss_pred ----------CCCccEEEeecCCcccccCCCceecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCC
Q 009091 232 ----------DGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWA 298 (544)
Q Consensus 232 ----------~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~ 298 (544)
+....+||+|||++.............||+.|+|||++. ..++.++|||||||+||+|++|..||..
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 223469999999998765544445568999999999874 3488999999999999999999999976
Q ss_pred CChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 299 ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 299 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
......+...+.....+ +....+.++.+||..||..+|.+||++.++|.|||++....
T Consensus 246 ~~~~~qli~~lk~~p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 246 ANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred CCcHHHHHHHHhcCCCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence 65444333333332222 22346899999999999999999999999999999986543
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-44 Score=344.68 Aligned_cols=254 Identities=36% Similarity=0.639 Sum_probs=211.1
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++++.||+|+||+||+|.+..++..+|+|++...... ........+|+.+++++. ||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhcccccc-cccccccccccccccccccccc
Confidence 78899999999999999999999999999999664321 222233456999999996 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc-cCCCce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~~~ 254 (544)
|+++++|.+++...+.++...+..++.|++.||.+||+.||+|+||||+|||++ .++.++|+|||.+... ......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTTEESTSTTSEB
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 999999999999888899999999999999999999999999999999999994 4557999999999863 233344
Q ss_pred ecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE---KGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
....++..|+|||++. ..++.++||||||+++|+|++|..||..... ......................+..+.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD 235 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence 5568999999999986 5689999999999999999999999988732 2233333322222222211122479999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCcc
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+|.+||+.||++||++.++++||||
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHccCChhHCcCHHHHhcCCCC
Confidence 9999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=353.39 Aligned_cols=258 Identities=38% Similarity=0.615 Sum_probs=237.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|.+...||.|.|++|.+|++..++..||+|.|.+..... .....+.+|+++|+.|. |||||+++.+......+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLN-HPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcC-CcceeeeeeeeeecceeEEE
Confidence 45999999999999999999999999999999998776543 34455889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||+.+|.+++++.+.+.+.+..++.++.|++.|++|||+++|||||||++|||| +.+.++||+|||++..+..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccccc
Confidence 9999999999999999999999999999999999999999999999999999999 6667899999999999998888
Q ss_pred eecccCCccccCccccccc--CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
..+++|++.|.|||++.+. -++.+|+||+|++||-|+.|.+||.+..-.++....+.+.+..+. .++-++.++|
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dce~lL 286 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDCEDLL 286 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechhHHHH
Confidence 8899999999999999753 588999999999999999999999999888888888888877665 3688999999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
+++|-.+|.+|++.+++..|.|.......
T Consensus 287 rk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 287 RKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred HHhhccCccccCCHHHhhhhcccchhhhh
Confidence 99999999999999999999999876554
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=353.56 Aligned_cols=254 Identities=27% Similarity=0.468 Sum_probs=216.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|.-++.||+|+||.||-|++..+...||||++.-+.-.....-..+..|+.+|++|. |||++.+-|+|..+...||
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWL 103 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWL 103 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHH
Confidence 455777899999999999999999999999999884333222333456889999999998 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||||-| +-.+++.- .+++.+-.++.|+.+.+.||+|||+.+.||||||..|||++ ..+.|||+|||.|....+.
T Consensus 104 VMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 104 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchhhcCch
Confidence 9999965 77777754 46799999999999999999999999999999999999995 4468999999999876543
Q ss_pred CceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC-CccCCCCcccCCCHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG-GVDFESEPWLLISDS 326 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 326 (544)
.+++|||.|||||++. |.|+-++||||||++..||...++|+++.+....+.-|-.+ ...+.. ..+++.
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs---~eWS~~ 253 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS---NEWSDY 253 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC---chhHHH
Confidence 4689999999999873 67999999999999999999999999988776555555444 333333 356899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|+.||..||++-|.+|||++++|.|+|....
T Consensus 254 F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 254 FRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred HHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 9999999999999999999999999998754
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=368.73 Aligned_cols=258 Identities=29% Similarity=0.470 Sum_probs=218.2
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ--- 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--- 168 (544)
..++|.+.+.||+|+||+||+|.+..++..||||++..... .......+.+|+.++..+. |+||++++..+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccC
Confidence 34679999999999999999999999999999999865433 3445567889999999997 999999988765322
Q ss_pred -----eEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 169 -----SVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 169 -----~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
.+++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.||+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEE
Confidence 378999999999999988653 4589999999999999999999999999999999999995 4457999
Q ss_pred eecCCcccccCC---CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC
Q 009091 240 TDFGLSVFIDEG---KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 240 ~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
+|||+++..... ......+||+.|+|||++. ..++.++|||||||++|||++|+.||.+......+..+..+....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~ 264 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP 264 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 999999765432 2234568999999999986 458999999999999999999999999888777777776654432
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
. ...+++++.++|.+||+.||.+||++.++++|||++..
T Consensus 265 ~---~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 265 L---PPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred C---CCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 1 23578999999999999999999999999999998764
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=360.75 Aligned_cols=250 Identities=26% Similarity=0.442 Sum_probs=214.6
Q ss_pred eecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCC
Q 009091 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG 180 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 180 (544)
.||+|.||+||.|++..+...+|||.+... .....+-+..||.+.++|+ |.|||+++|.+..++.+-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 599999999999999999999999988543 3445567889999999998 999999999999999999999999999
Q ss_pred ChHHHHHH-cCCC--CHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CCceec
Q 009091 181 ELFDKIIA-QGHY--TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRD 256 (544)
Q Consensus 181 ~L~~~l~~-~~~~--~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~ 256 (544)
+|.++|+. .+++ .+..+..+.+||++||.|||++.|||||||-+|||++.. .+.+||+|||.++.+.. ++...+
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy--SGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY--SGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec--cceEEecccccchhhccCCccccc
Confidence 99999986 5777 889999999999999999999999999999999999643 46899999999998764 345567
Q ss_pred ccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 257 IVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 257 ~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
+.||..|||||++. ..|+.++|||||||++.||.||++||......... -+.-|.+...++....++.+++.||.+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-MFkVGmyKvHP~iPeelsaeak~Filr 814 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-MFKVGMYKVHPPIPEELSAEAKNFILR 814 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-hhhhcceecCCCCcHHHHHHHHHHHHH
Confidence 89999999999995 35999999999999999999999999765443211 112233333333344678999999999
Q ss_pred hcccCcCCCCChhhhhCCCccccC
Q 009091 334 MLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|+.+||.+||+|.++|.+||++.+
T Consensus 815 cFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 815 CFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HcCCCcccCccHHHhccCcccccC
Confidence 999999999999999999999876
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=355.89 Aligned_cols=255 Identities=23% Similarity=0.377 Sum_probs=205.1
Q ss_pred cccccceecceecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.+..+|.+.+.||.|+||.||+|... .++..||+|.+... ....+|+.+++++. ||||+++++++...+
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~-h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTIS-HRAIINLIHAYRWKS 159 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcC-CCCccceeeeEeeCC
Confidence 34567999999999999999999754 35678999977432 23468999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+|+|||++. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.++|+|||++...
T Consensus 160 ~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 160 TVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPENAVLGDFGAACKL 235 (392)
T ss_pred EEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEccCcccccc
Confidence 9999999995 58989887778899999999999999999999999999999999999994 4457999999999765
Q ss_pred cCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH---HHHHHHHhC----Ccc---
Q 009091 249 DEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK---GIFDAILKG----GVD--- 314 (544)
Q Consensus 249 ~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---~~~~~i~~~----~~~--- 314 (544)
.... ......||+.|+|||++. ..++.++|||||||++|||++|..||.+.... ..+..+.+. ...
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 4322 123467999999999986 45899999999999999999999999765321 122222110 000
Q ss_pred --------------------CCCCc---ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 315 --------------------FESEP---WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 315 --------------------~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+..+. ...++.++.++|.+||..||.+|||+.++|.||||++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 00000 013467889999999999999999999999999998754
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=336.92 Aligned_cols=254 Identities=28% Similarity=0.483 Sum_probs=213.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC--hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN--KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.|.+.+.||+|++|.||+|.+..++..+|+|.+....... ......+.+|+.+++++. ||||+++++++...+.+++
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEEE
Confidence 4889999999999999999999999999999886543221 223457889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|+||+++++|.+.+...+.+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|+|||++.......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceeccccc
Confidence 999999999999998888899999999999999999999999999999999999994 44579999999987654321
Q ss_pred ce----ecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 253 VY----RDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 253 ~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.. ....|+..|+|||++.+ .++.++||||||+++|+|++|+.||...........+........ ....++..+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ--LPSHVSPDA 236 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC--CCccCCHHH
Confidence 11 23568889999998864 488999999999999999999999987655554444433322222 223578999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.++|.+||..+|.+|||+.++++||||
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 237 RNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-43 Score=343.19 Aligned_cols=253 Identities=34% Similarity=0.641 Sum_probs=221.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..+++.+|+|++.+.........+.+.+|+++++++. ||||+++++++...+.+++||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEE
Confidence 5899999999999999999999999999999987654444445677889999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||+|+|||++ .++.+||+|||++...... .
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~~~~~~--~ 155 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFAKRVKGR--T 155 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCccccCCC--C
Confidence 9999999999998888899999999999999999999999999999999999994 4457999999999876554 2
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
....|++.|+|||.+. ..++.++||||||+++|+|++|..||...........+..+...++. .++..++++|.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~ 231 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLIRN 231 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc----cCCHHHHHHHHH
Confidence 3457899999999875 45788999999999999999999999887766666666655444332 468999999999
Q ss_pred hcccCcCCCC-----ChhhhhCCCccccC
Q 009091 334 MLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
||..||.+|+ +++++++||||...
T Consensus 232 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 232 LLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HccCCHHHccCcccCCHHHHHcCcccccC
Confidence 9999999999 89999999999653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-43 Score=354.96 Aligned_cols=259 Identities=27% Similarity=0.430 Sum_probs=209.3
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 167 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~ 98 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL 98 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcC-CCCccccceeecccccc
Confidence 34567999999999999999999999999999999885432 22334567789999999997 99999999987543
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+|+||||+++ +|...+.. .++...+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 99 ~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~ 172 (364)
T cd07875 99 EEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 172 (364)
T ss_pred cccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEEeCCC
Confidence 457999999965 77777643 488899999999999999999999999999999999994 445799999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc---------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD--------- 314 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~--------- 314 (544)
+.............||+.|+|||++. ..++.++|||||||++|+|++|+.||.+......+..+......
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 98765544445568999999999886 45899999999999999999999999887665554444321100
Q ss_pred -------------CC----------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 315 -------------FE----------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 315 -------------~~----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+. .......+..+++||.+||..||.+|||+.++|+||||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 00 00011134678999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=354.10 Aligned_cols=238 Identities=25% Similarity=0.439 Sum_probs=207.5
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
++-||.|+.|.||+++.. ++.||||++... -..+|+-|++|+ ||||+.|.|+|.....+|||||||+
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccc
Confidence 456999999999999966 789999976321 235788899998 9999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceeccc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 258 (544)
.|-|+..|+..+.++......|..+|+.|+.|||.+.|||||||.-||||+.++ .|||+|||.++...+......++
T Consensus 196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d---~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD---VVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc---eEEeccccchHhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999998776 69999999999887766666789
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
||..|||||+++ .+.+.|+||||||||||||+||..||.......++--+-.+...++.+ ..+++-|+-||+.||+-
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvP--stcP~GfklL~Kqcw~s 350 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVP--STCPDGFKLLLKQCWNS 350 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCc--ccCchHHHHHHHHHHhc
Confidence 999999999997 468999999999999999999999997766655444443344444433 36799999999999999
Q ss_pred CcCCCCChhhhhCCCcc
Q 009091 338 DPKKRITSAEVLEHPWM 354 (544)
Q Consensus 338 dp~~Rps~~ell~hp~f 354 (544)
.|..||++.++|.|-=+
T Consensus 351 KpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 351 KPRNRPSFRQILLHLDI 367 (904)
T ss_pred CCCCCccHHHHHHHHhh
Confidence 99999999999998443
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=354.86 Aligned_cols=259 Identities=28% Similarity=0.440 Sum_probs=207.7
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 167 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhC-CCchhceeeeeeccccc
Confidence 35577999999999999999999999999999999885432 22334567788999999997 99999999988643
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+++||||+++ +|...+.. .+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~---~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC---CCCCEEEeeCcc
Confidence 357999999965 67666643 588999999999999999999999999999999999994 445799999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC------------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------------ 311 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~------------ 311 (544)
+.............||+.|+|||++. ..++.++|||||||++|+|++|+.||.+......+..+...
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 98765544445568999999999886 45899999999999999999999999876544333222111
Q ss_pred ----------CccC----------------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 312 ----------GVDF----------------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 312 ----------~~~~----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.... ........+..+++||.+||..||.+|||+.|+|+||||...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 0000 000011235678999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=357.60 Aligned_cols=257 Identities=27% Similarity=0.438 Sum_probs=210.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----eE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-----SV 170 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~~ 170 (544)
|++++.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++.++ |+||+++++++...+ .+
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccceE
Confidence 778899999999999999999999999999885421 22334567889999999997 999999999998776 78
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|+||||+. ++|...+.....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.....
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeeccc
Confidence 99999996 5888888888889999999999999999999999999999999999999 4456899999999986543
Q ss_pred CC--ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh----------------
Q 009091 251 GK--VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK---------------- 310 (544)
Q Consensus 251 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~---------------- 310 (544)
.. ......+++.|+|||++.+ .++.++|||||||++|||++|+.||.+......+..+..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 21 2233568999999998864 478999999999999999999999987766554443322
Q ss_pred -------CCccCCC-----CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 311 -------GGVDFES-----EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 311 -------~~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.....+. ......++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 1111100 01123578899999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=335.24 Aligned_cols=252 Identities=25% Similarity=0.460 Sum_probs=214.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.++.+||+|+||.||+|.++.+|..+|+|.+.- ..+.+++.+|+.+|+++. .|+||++||.|.....+||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-----~sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-----DTDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-----cchHHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEeeh
Confidence 38889999999999999999999999999997732 456788999999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||..|++.+.++.+ +.+++.++..+++..+.||.|||...-+|||||..|||+ +.++..||+|||.|..+.+...
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhHH
Confidence 999999999999864 569999999999999999999999999999999999999 5556899999999988866432
Q ss_pred -eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC--CccCCCCcccCCCHHHHH
Q 009091 254 -YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKD 329 (544)
Q Consensus 254 -~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~ 329 (544)
..+.+|||.|||||++.. .|+.++||||||++..||..|++||..-... ..|.-- ..+........++.++.+
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---RAIFMIPT~PPPTF~KPE~WS~~F~D 261 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---RAIFMIPTKPPPTFKKPEEWSSEFND 261 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---ceeEeccCCCCCCCCChHhhhhHHHH
Confidence 245789999999999975 6999999999999999999999999654332 111111 111111112346889999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
||++||.++|++|.|+-+|++|||++...
T Consensus 262 Fi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 262 FIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred HHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 99999999999999999999999998753
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-44 Score=356.59 Aligned_cols=257 Identities=22% Similarity=0.436 Sum_probs=221.4
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeecc-ccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe--EEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRK-LVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS--VHL 172 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~l 172 (544)
.+....||+|+|-+||+|.|..+|..||.--+.... ...+...++|..|+.+|+.|. ||||++++.+|.+... +.+
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCceeee
Confidence 466788999999999999999999999975443322 234556789999999999998 9999999999987654 889
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--CCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM--GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~--~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|+|++..|+|..|+++.+.+....++.|++||++||.|||++ .|||||||++||+|+. ..+.|||+|+|+|.....
T Consensus 121 iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG--~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG--NLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC--CcCceeecchhHHHHhhc
Confidence 999999999999999999999999999999999999999986 6999999999999974 346799999999987765
Q ss_pred CCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
... ...+|||.|||||++...|+..+||||||+.++||+|+.+||.... ...+++.+..|..+-.... .-.+++++
T Consensus 199 s~a-ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~k--V~dPevr~ 275 (632)
T KOG0584|consen 199 SHA-KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSK--VKDPEVRE 275 (632)
T ss_pred ccc-ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhc--cCCHHHHH
Confidence 433 4489999999999999999999999999999999999999998764 4567788877754332222 23789999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
||.+||.. .++|+|+.|||+||||.+...
T Consensus 276 fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 276 FIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred HHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 99999999 999999999999999998643
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=347.66 Aligned_cols=249 Identities=23% Similarity=0.379 Sum_probs=205.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.....++..||+|.||+||+|.+.. .||||++..... .....+.|++|+.++++-+ |.||+-+.|+|..++. .|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AI 464 (678)
T ss_pred HHHhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-ee
Confidence 3456788999999999999999874 599999865443 3447789999999999998 9999999999998877 89
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc--
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-- 249 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-- 249 (544)
|+-+|+|.+|+.+|+.. ..+.....+.|++|++.|+.|||.++|||||||..||+| .++..|||+|||++..-.
T Consensus 465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeee
Confidence 99999999999999753 468889999999999999999999999999999999999 455689999999986432
Q ss_pred -CCCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC-CCcccCC
Q 009091 250 -EGKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE-SEPWLLI 323 (544)
Q Consensus 250 -~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 323 (544)
.........|...|||||+++ .+|+..+|||||||++|||++|..||.......++-.+-+|..... ......+
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~ 621 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNC 621 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccC
Confidence 222334457889999999985 4599999999999999999999999986555555444444422111 1223456
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.++++|+..||.+++++||.+.+||.
T Consensus 622 pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 622 PKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 789999999999999999999999876
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=342.54 Aligned_cols=256 Identities=34% Similarity=0.562 Sum_probs=223.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|+.-++||+|+||.||-++.+.||+.||+|.+.+.............+|-.+|.++. .+.||.+-.+|+..+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceEEE
Confidence 34677788999999999999999999999999987766655566667789999999997 89999999999999999999
Q ss_pred EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|..|.||+|.-.|...+ .+++..++.++.+|+.||++||+.+||+|||||+|||| |..++|+|+|.|+|..+.++
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence 99999999987776655 79999999999999999999999999999999999999 66678999999999999998
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH----HHHHHHHhCCccCCCCcccCCCHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK----GIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
......+||.+|||||++. +.|+.+.|.|||||+||||+.|+.||....+. ++-..+......++ ...|++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~----~kFS~e 416 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS----DKFSEE 416 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc----cccCHH
Confidence 8888889999999999996 45999999999999999999999999765443 33344444433333 468999
Q ss_pred HHHHHHHhcccCcCCCCC-----hhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
++++.+.+|++||.+|.- ++++-+||||+..
T Consensus 417 akslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 417 AKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 999999999999999985 5689999999874
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=352.57 Aligned_cols=263 Identities=24% Similarity=0.404 Sum_probs=210.5
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR- 167 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 167 (544)
...+.++|++.+.||.|+||+||+|.+..++..||||++.... ........+.+|+.+++++. ||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 87 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMK-HENVIGLLDVFTPAT 87 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccc
Confidence 3455678999999999999999999999999999999885432 12233456778999999997 99999999887532
Q ss_pred -----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 168 -----QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 168 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
...|+++|++ +++|.+++. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 88 ~~~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Df 162 (343)
T cd07878 88 SIENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDF 162 (343)
T ss_pred cccccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcCC
Confidence 4578999998 778887664 45799999999999999999999999999999999999994 4457999999
Q ss_pred CCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc------
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD------ 314 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~------ 314 (544)
|++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+......
T Consensus 163 g~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07878 163 GLARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVL 240 (343)
T ss_pred ccceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 999876542 234679999999998854 5889999999999999999999999876554433333221000
Q ss_pred -----------------CCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 315 -----------------FESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 315 -----------------~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
.+.. .....++.+.+||.+||..||.+|||+.++|+||||.....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 241 KKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred HhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCC
Confidence 0000 012346778999999999999999999999999999876544
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-43 Score=350.68 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=199.5
Q ss_pred cccceecceecccCCeEEEEEEE-----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTE-----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++++.||+|+||.||+|.+ ..++..||+|++.... .......+.+|+.++.++.+||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 35699999999999999999975 2345689999885432 2334567889999999996699999999988764
Q ss_pred -CeEEEEEeccCCCChHHHHHHc---------------------------------------------------------
Q 009091 168 -QSVHLVMELCSGGELFDKIIAQ--------------------------------------------------------- 189 (544)
Q Consensus 168 -~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 189 (544)
+.+++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4689999999999999998753
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc---eecccCCc
Q 009091 190 -----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSA 261 (544)
Q Consensus 190 -----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~ 261 (544)
..++...+..++.||+.||.|||++||+||||||+|||++ .+..+||+|||++........ .....+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 2367788899999999999999999999999999999994 445799999999986543221 12234667
Q ss_pred cccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCc
Q 009091 262 YYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 262 ~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 339 (544)
.|+|||++. ..++.++|||||||++|||++ |..||........+............ ...+++.+.++|.+||+.||
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp 318 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA--PENATPEIYRIMLACWQGDP 318 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHccCCh
Confidence 899999875 568999999999999999997 99999876544333333332222221 23578899999999999999
Q ss_pred CCCCChhhhhC
Q 009091 340 KKRITSAEVLE 350 (544)
Q Consensus 340 ~~Rps~~ell~ 350 (544)
.+|||+.++++
T Consensus 319 ~~RPs~~el~~ 329 (338)
T cd05102 319 KERPTFSALVE 329 (338)
T ss_pred hhCcCHHHHHH
Confidence 99999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=345.72 Aligned_cols=249 Identities=27% Similarity=0.441 Sum_probs=192.5
Q ss_pred cceecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEEEE
Q 009091 99 GKELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSVHLVM 174 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~ 174 (544)
+++||+|+||+||+|.++ .++..||+|.+.... ....+.+|+.+++++. ||||+++++++.. ...++++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999965 467899999884322 2345678999999997 9999999998854 45789999
Q ss_pred eccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC-CCCccEEEeecCC
Q 009091 175 ELCSGGELFDKIIAQ---------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK-DGGAMLKATDFGL 244 (544)
Q Consensus 175 e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~-~~~~~vkl~Dfg~ 244 (544)
||+. ++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9995 4888877532 248899999999999999999999999999999999999643 3446799999999
Q ss_pred cccccCCC----ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChH---------HHHHHHH
Q 009091 245 SVFIDEGK----VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEK---------GIFDAIL 309 (544)
Q Consensus 245 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---------~~~~~i~ 309 (544)
+....... ......||+.|+|||++.+ .++.++||||+||++|+|++|..||...... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 98764321 2234678999999998753 4899999999999999999999999643321 1111111
Q ss_pred hCCc-----------cCC-----------------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 310 KGGV-----------DFE-----------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 310 ~~~~-----------~~~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.... ..+ .......+..+.+||.+||++||.+|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1000 000 00001235678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=335.00 Aligned_cols=254 Identities=28% Similarity=0.483 Sum_probs=209.4
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR---- 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~---- 167 (544)
....|++.+.||+|+||.||+|.+..++..+|+|++... ......+.+|+.+++++.+|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC----CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 345689999999999999999999999999999988542 233457889999999996699999999998652
Q ss_pred --CeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 168 --QSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 168 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
..+++||||+++++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||+++ .+..++|+|||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Dfg 156 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFG 156 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccCC
Confidence 4689999999999999998863 3589999999999999999999999999999999999995 44579999999
Q ss_pred CcccccCC-CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC
Q 009091 244 LSVFIDEG-KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 244 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
++...... .......|+..|+|||++. ..++.++|||||||++|+|++|..||...........+..... .
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~ 234 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA--P 234 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC--C
Confidence 99865432 2223457899999999874 2478899999999999999999999976655444433333221 1
Q ss_pred CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 317 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
......++..+.+||.+||..||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 235 RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 12223568899999999999999999999999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=335.07 Aligned_cols=253 Identities=29% Similarity=0.470 Sum_probs=211.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||+|+||.||+|.+..++..||+|.+... .......+.+|+.+++.+. ||||+++++++...+.+++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEE
Confidence 4699999999999999999999999999999988543 2233456788999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||+++++|.+++...+.+++..++.++.|++.||.|||+.||+|+||||+||++. ..+.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEccCccc
Confidence 99999999999998888999999999999999999999999999999999999994 44579999999987654321
Q ss_pred ceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC-CcccCCCHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES-EPWLLISDSA 327 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~ 327 (544)
......|+..|+|||++. +.++.++|+|||||++|+|++|..||...................+. .....++..+
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSF 241 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHH
Confidence 223457999999999873 45888999999999999999999999765544433333333222111 1112467889
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
.++|.+||..||++||+++++++|||
T Consensus 242 ~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=340.95 Aligned_cols=258 Identities=25% Similarity=0.404 Sum_probs=210.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||.|+||.||+|.+..++..||+|.+.... .......+.+|+.++++++ ||||+++++++...+.+++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccc--ccCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEE
Confidence 45999999999999999999999999999999885433 2223446778999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||++ ++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchhccCCCC
Confidence 99997 5898888764 4689999999999999999999999999999999999994 44579999999987654322
Q ss_pred -ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc---------------
Q 009091 253 -VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD--------------- 314 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~--------------- 314 (544)
......+++.|+|||++.+ .++.++|||||||++|+|++|+.||...+..+....+......
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 2233467899999998753 4788999999999999999999999887765544433221100
Q ss_pred ----CCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 315 ----FES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 315 ----~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.+. .....+++.+++||.+||..||.+|||++++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 000 01124688899999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=339.89 Aligned_cols=256 Identities=26% Similarity=0.375 Sum_probs=210.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|++++++++ ||||+++++++..++.+++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEe
Confidence 4889999999999999999999999999999875321 2334567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++++|.+++...+.+++..+..++.|++.||.|||+ .+++||||||+|||++. ++.+||+|||++...... .
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~-~ 154 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDS-M 154 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec---CCcEEEccCCCccccccc-c
Confidence 999999999999888889999999999999999999997 69999999999999954 457999999998765432 2
Q ss_pred eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC-----------------
Q 009091 254 YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF----------------- 315 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~----------------- 315 (544)
.....|++.|+|||++.+ .++.++|+|||||++|+|++|..||...........+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 234678999999998754 58889999999999999999999997554333222111100000
Q ss_pred -----------------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 316 -----------------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 316 -----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+..+...++.++++||.+||..||++|||+.++++||||...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 001112367889999999999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=338.17 Aligned_cols=257 Identities=28% Similarity=0.503 Sum_probs=218.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.+. ||||+++++.+..++.+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEEE
Confidence 4888999999999999999999999999999886544333344567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++|++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||+++ ..+.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCccccCcCccc
Confidence 9999999999998888899999999999999999999999999999999999994 44579999999986421100
Q ss_pred --------------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC
Q 009091 253 --------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317 (544)
Q Consensus 253 --------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 317 (544)
......|+..|+|||.+. ..++.++|+|||||++|+|++|..||.+....+....+..+....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 011245788999999875 56899999999999999999999999988777777776665544433
Q ss_pred CcccCCCHHHHHHHHHhcccCcCCCCC---hhhhhCCCcccc
Q 009091 318 EPWLLISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMRE 356 (544)
Q Consensus 318 ~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~ 356 (544)
... .++..+.++|.+||+.||.+||+ +.++|+||||..
T Consensus 238 ~~~-~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 238 GDE-ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred ccc-cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 322 57899999999999999999998 689999999965
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=360.68 Aligned_cols=257 Identities=32% Similarity=0.471 Sum_probs=212.9
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEE-E
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA-Y 164 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~-~ 164 (544)
|...+.-.-+++|.+.|.+|||+.||+|.+...+..||+|++... .+.....+.+||.+|+.|.+|+|||.+++. .
T Consensus 29 G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~ 105 (738)
T KOG1989|consen 29 GQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSA 105 (738)
T ss_pred ceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecccc
Confidence 333333445688999999999999999999988899999988543 567788899999999999999999999993 2
Q ss_pred E---eC---CeEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCC
Q 009091 165 E---DR---QSVHLVMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 165 ~---~~---~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~ 234 (544)
. .. -.+.|.||||.||.|.+++.. ...|++.++++|+.++++|+.+||... |||||||-+||||+.+
T Consensus 106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~--- 182 (738)
T KOG1989|consen 106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD--- 182 (738)
T ss_pred ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC---
Confidence 2 11 257899999999999999985 456999999999999999999999887 9999999999999554
Q ss_pred ccEEEeecCCcccccCCC-cee---------cccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCC
Q 009091 235 AMLKATDFGLSVFIDEGK-VYR---------DIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAET 300 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~~~-~~~---------~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~ 300 (544)
+..||||||.|....... ... ...-|+.|+|||++. ...+.|+|||+|||+||-|+....||....
T Consensus 183 g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg 262 (738)
T KOG1989|consen 183 GNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG 262 (738)
T ss_pred CCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc
Confidence 479999999987543222 111 134699999999874 458999999999999999999999997654
Q ss_pred hHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 301 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. -+|+.+.+.++.. ..++..+.+||+.||+.||.+||++.+++.+-+-
T Consensus 263 ~----laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 263 K----LAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred c----eeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 4 3567777777664 4689999999999999999999999999866553
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=333.45 Aligned_cols=255 Identities=28% Similarity=0.463 Sum_probs=215.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||.|++|.||+|.+..++..+|+|++.... .......+.+|+.+++.+. |+||+++++++.....+++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEE
Confidence 5889999999999999999999999999999885432 2334567889999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-Cc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~ 253 (544)
||+++++|.+++... .+++..++.++.|++.||.|||+.+|+||||+|+||+++ .++.++|+|||++...... ..
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEcccccceeecccccc
Confidence 999999999998765 789999999999999999999999999999999999994 4557999999999877543 22
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+......... ...++..+.++|.
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 232 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE--GNKFSKPFKDFVS 232 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc--ccccCHHHHHHHH
Confidence 33457889999999876 45899999999999999999999999876655554444443221111 1127889999999
Q ss_pred HhcccCcCCCCChhhhhCCCccccCC
Q 009091 333 KMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+||..||.+|||++++++||||++..
T Consensus 233 ~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 233 LCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred HHhhCChhhCcCHHHHhhChhhcCCC
Confidence 99999999999999999999998754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=335.72 Aligned_cols=241 Identities=20% Similarity=0.218 Sum_probs=205.6
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CCeEEEEEe
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVME 175 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~~~~lv~e 175 (544)
..||+|++|.||+|.. +|+.||+|.+.+.........+.+.+|+.+|+++. ||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence 4699999999999987 58899999986544333333577889999999997 9999999999876 457899999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
|+++|+|.+++...+.++......++.+++.||.|||+. +++||||||+|||++ .++.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEcccchHhhhcccc--
Confidence 999999999999888899999999999999999999984 999999999999994 45679999999998654432
Q ss_pred ecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
....|+..|+|||++. ..++.++|||||||++|||++|..||...........+......+..+ ..+++.+.+||
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li 255 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIV 255 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHH
Confidence 2357899999999985 468999999999999999999999999888777777776554444332 24789999999
Q ss_pred HHhcccCcCCCCChhhhhC
Q 009091 332 RKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~ 350 (544)
.+||+.||.+|||+.++++
T Consensus 256 ~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 256 EACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHhcCCcccCcCHHHHHH
Confidence 9999999999999999974
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=341.33 Aligned_cols=257 Identities=32% Similarity=0.575 Sum_probs=218.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|++|.||+|.+..++..+|+|.+.+...........+.+|+++++++. |+||+++++.+......++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEE
Confidence 5899999999999999999999999999999997654433345567889999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+.|++|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE---SGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC---CCCEEEeecchhhcccccc
Confidence 999999999998764 46899999999999999999999999999999999999954 4579999999987543211
Q ss_pred ------------------------------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh
Q 009091 253 ------------------------------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE 301 (544)
Q Consensus 253 ------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~ 301 (544)
......|+..|+|||++. ..++.++||||||+++|+|++|..||.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 011346889999999875 4588899999999999999999999988877
Q ss_pred HHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC----hhhhhCCCccccC
Q 009091 302 KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT----SAEVLEHPWMREG 357 (544)
Q Consensus 302 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~f~~~ 357 (544)
...+..+......++.. ..+++.+.++|.+||..||.+||+ ++++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 238 DETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 77666666544433322 236899999999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=350.97 Aligned_cols=250 Identities=21% Similarity=0.347 Sum_probs=201.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+++|++|. |+||+++++++...+..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEE
Confidence 346999999999999999999999999999999532 123568999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||++. ++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ....+||+|||++......
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceecccc
Confidence 999995 6888888764 4699999999999999999999999999999999999994 4457999999999865432
Q ss_pred C---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC--------hHHHHHHHHhCCcc-----
Q 009091 252 K---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET--------EKGIFDAILKGGVD----- 314 (544)
Q Consensus 252 ~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~--------~~~~~~~i~~~~~~----- 314 (544)
. ......||+.|+|||++. ..++.++|||||||+||||++|..|+.... ...+...+......
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 1 122457999999999886 458999999999999999999887664322 12222222221110
Q ss_pred ----------------------CCCCcc---cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 315 ----------------------FESEPW---LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 315 ----------------------~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
...+.| ..++..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 001111 134668999999999999999999999999999974
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=331.72 Aligned_cols=250 Identities=32% Similarity=0.596 Sum_probs=214.5
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||.|++|.||+|.+..++..+|+|++.+.........+.+.+|+.+++.+. ||||+++++.+.++..+++||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 699999999999999999999999997655444455678999999999997 9999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCc
Q 009091 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261 (544)
Q Consensus 182 L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~ 261 (544)
|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++.............|++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccccccccCCc
Confidence 999998888899999999999999999999999999999999999994 44579999999998776543334457899
Q ss_pred cccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC--hHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccC
Q 009091 262 YYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET--EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338 (544)
Q Consensus 262 ~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 338 (544)
.|+|||.+. ..++.++|+||||+++|+|++|..||.... .......+..+......+ ...++++.++|.+||..|
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~ 234 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLRRN 234 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHccCC
Confidence 999999875 458899999999999999999999998776 455555555322222222 234889999999999999
Q ss_pred cCCCCC-----hhhhhCCCccccC
Q 009091 339 PKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 339 p~~Rps-----~~ell~hp~f~~~ 357 (544)
|.+||+ ++|+++||||++.
T Consensus 235 p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 235 PEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred hhhCcCCcccCHHHHhcChhhhCC
Confidence 999999 9999999999864
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=333.70 Aligned_cols=257 Identities=27% Similarity=0.453 Sum_probs=214.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||.|+||.||++.+..++..+++|.+... .....+.+.+|+.+++.+. ||||+++++++...+..++|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEE
Confidence 3488999999999999999999999999999988432 2344567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+++++|..++.. ...+++..+..++.|++.||.|||+.||+||||||+|||++. ++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~---~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc---CCCEEEccccccccccccc
Confidence 999999999888765 456899999999999999999999999999999999999944 457999999998765432
Q ss_pred CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 252 KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.......|+..|+|||++. ..++.++|||||||++|+|++|..||...........+....... ......++.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 236 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LAQPSRWSS 236 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC-CCCccccCH
Confidence 2223457899999999873 247789999999999999999999998776666555554432221 112234788
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
++.+||.+||+.||.+||++.++++||||+...
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 237 EFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 999999999999999999999999999998753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=334.82 Aligned_cols=256 Identities=27% Similarity=0.500 Sum_probs=210.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|++|.||+|.++.++..||+|++..... .....+.+.+|+.+++++. |+||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 358999999999999999999999999999998865432 2233456789999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||+++++|..++.....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccceecCCCcc
Confidence 99999988888777667799999999999999999999999999999999999994 44579999999998765433
Q ss_pred ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC------------------
Q 009091 253 VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG------------------ 312 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~------------------ 312 (544)
......++..|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 2334568889999998753 47889999999999999999999998766544333322100
Q ss_pred -ccCCCC--------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 313 -VDFESE--------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 313 -~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
...+.+ ....++..+.+||.+||++||++||++.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 000000 012467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=332.82 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=209.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+|+.+++.+. ||||+++++++...+.+++|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEE
Confidence 45999999999999999999999999999999885432 233456788999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEECcCccceeeccccc
Confidence 99999999999998888899999999999999999999999999999999999994 44579999999998664322
Q ss_pred ceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC-cccCCCHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE-PWLLISDSA 327 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 327 (544)
......|++.|+|||.+. ..++.++|+|||||++|+|++|..||...........+.......+.. ....++..+
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF 241 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHH
Confidence 223457889999999873 347889999999999999999999997554333222222222221111 112467899
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
.+||++||+.||.+|||++++|+|+|
T Consensus 242 ~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 242 HNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=373.62 Aligned_cols=257 Identities=32% Similarity=0.539 Sum_probs=227.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|.+.+.||+|+||.|.+++++.++..||.|++.+-......+..-|..|-.+|..-. .+=|+.++.+|.++.++|+
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEE
Confidence 456999999999999999999999999999999997644444455667888889988765 7889999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-C
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-G 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~ 251 (544)
||||++||+|..++.+..++|+..++.|+..|+.||+.||+.|+|||||||+|||| +..|+|||+|||.+..+.. +
T Consensus 153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~dG 229 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDADG 229 (1317)
T ss_pred EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCCC
Confidence 99999999999999998899999999999999999999999999999999999999 7777999999999988763 3
Q ss_pred Cc-eecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC--CccCCCCcccC
Q 009091 252 KV-YRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLL 322 (544)
Q Consensus 252 ~~-~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~ 322 (544)
.. ....+|||.|.+||++. +.|+..+|+||+||++|||+.|..||+..+--+.+..|+.. .+.|| ....
T Consensus 230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~~ 307 (1317)
T KOG0612|consen 230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DETD 307 (1317)
T ss_pred cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--cccc
Confidence 33 34568999999999983 45999999999999999999999999999998999999876 45554 3446
Q ss_pred CCHHHHHHHHHhcccCcCCCCC---hhhhhCCCcccc
Q 009091 323 ISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMRE 356 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~ 356 (544)
+|+++++||.+++. +|..|.. ++++-.||||..
T Consensus 308 VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 308 VSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred cCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence 99999999999887 5788888 999999999975
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=330.83 Aligned_cols=253 Identities=29% Similarity=0.486 Sum_probs=211.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh------hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK------QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~------~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+|.++..||.|++|.||+|.+..++..+|+|.+........ ...+.+.+|+.+++++. ||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 47888999999999999999998999999998865432211 12356889999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
..++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||+++ .+..++|+|||.+...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEecccCCCccc
Confidence 9999999999999999998888899999999999999999999999999999999999994 4557999999998866
Q ss_pred cCCC-------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 249 DEGK-------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 249 ~~~~-------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
.... ......|+..|+|||.+. ..++.++|+|||||++|+|++|..||...........+..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~ 233 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIP 233 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCC
Confidence 4211 112346889999999875 4588899999999999999999999987665444444333211 1112
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
..++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 3478999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=333.49 Aligned_cols=258 Identities=27% Similarity=0.450 Sum_probs=214.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||.|+||.||+|.+..++..+++|.+... .......+.+|+.+++.+. |+||+++++.+..++.+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 86 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLWI 86 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEEE
Confidence 35699999999999999999999999999999988542 3445667889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|..++.. ...+++..+..++.|++.+|.|||+.||+||||||+||+++ .++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceecccc
Confidence 9999999999887765 45689999999999999999999999999999999999994 3457999999998754332
Q ss_pred -CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 252 -KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.......+++.|+|||++. ..++.++|+|||||++|+|++|..||...........+...... .......++
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 242 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-TLSQPSKWS 242 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc-cCCCCcccC
Confidence 2223457889999999873 23688999999999999999999999876655555444433221 111223567
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.++.++|.+||..||.+||+++++++||||....
T Consensus 243 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 243 MEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 8999999999999999999999999999997654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=334.49 Aligned_cols=256 Identities=30% Similarity=0.480 Sum_probs=216.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||.|+||.||+|.+..++..+|+|++... .....+.+.+|+.+++++. ||||+++++++..++..++|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEE
Confidence 4599999999999999999999889999999988532 3445567889999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+++++|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEEEccCccchhhcccc
Confidence 9999999999988764 5699999999999999999999999999999999999994 4457999999998765432
Q ss_pred CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 252 KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.......|++.|+|||++. ..++.++|+||||+++|+|++|..||...........+........ .....++.
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQPSKWSS 236 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CCcccCCH
Confidence 2223457899999999874 2367899999999999999999999987766665555554432211 11235788
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++.++|.+||..||.+||++.++|+||||...
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 237 SFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99999999999999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=330.42 Aligned_cols=254 Identities=26% Similarity=0.435 Sum_probs=214.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++++.||.|+||+||+|.+..++..+|+|++..... ......+.+|+.+++.+. |+||+++++.+...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--chHHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEEE
Confidence 58999999999999999999988999999998854432 225677899999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 175 ELCSGGELFDKIIAQ---GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 175 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|++++++|.+++... ..+++..+..++.|++.||.|||+.||+||||+|+||+++. +..++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~---~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE---DGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC---CCCEEEcccchHHHhccC
Confidence 999999999999764 45899999999999999999999999999999999999954 457999999998766543
Q ss_pred Cce-----ecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC--cccC
Q 009091 252 KVY-----RDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE--PWLL 322 (544)
Q Consensus 252 ~~~-----~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~ 322 (544)
... ....|+..|+|||++.. .++.++|+|||||++|+|++|..||........+..+.......... .+..
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKK 235 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccccc
Confidence 221 33468999999998753 58899999999999999999999998776665555554442221111 1235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+++.+.++|.+||..||.+||++.++++||||
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 68899999999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=334.86 Aligned_cols=259 Identities=29% Similarity=0.495 Sum_probs=214.8
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
....+|++.+.||+|+||.||+|.+..++..+|+|.+.... ....+.+.+|+.+++.+. |+||+++++.+......
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 92 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEE
Confidence 34467999999999999999999999999999999886433 233467889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++.....
T Consensus 93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITP 168 (296)
T ss_pred EEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccchhccc
Confidence 999999999999998754 4689999999999999999999999999999999999994 445799999999876543
Q ss_pred CC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ......|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+...... .......++..+.
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 247 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFR 247 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC-CCCCccccCHHHH
Confidence 22 223457899999999875 45789999999999999999999999876654433333322211 1112235788999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
++|.+||..||.+||++.++++||||....
T Consensus 248 ~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 277 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (296)
T ss_pred HHHHHHCcCCcccCcCHHHHhhChhhhccC
Confidence 999999999999999999999999998753
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=342.04 Aligned_cols=255 Identities=20% Similarity=0.297 Sum_probs=203.3
Q ss_pred ecceeccc--CCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 98 LGKELGRG--QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 98 ~~~~lg~G--~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
++++||+| +|++||++.++.+|..||+|++..... .......+.+|+.+++.+. ||||+++++++..++..++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 789999999999999999999855432 2334556788999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 176 LCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 176 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++. ++.++++||+.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~---~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV---DGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec---CCcEEEcccchhhccccccc
Confidence 99999999998653 45899999999999999999999999999999999999954 4479999998654432110
Q ss_pred -------ceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC------
Q 009091 253 -------VYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE------ 316 (544)
Q Consensus 253 -------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~------ 316 (544)
......++..|+|||++.+ .++.++|||||||++|||++|..||..............+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 1112356778999999853 488999999999999999999999976554443333222211100
Q ss_pred ------------------------------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 317 ------------------------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 317 ------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+....+++.+.+||.+||+.||.+|||++++|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 00111346789999999999999999999999999999763
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=329.96 Aligned_cols=252 Identities=33% Similarity=0.535 Sum_probs=211.6
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|..++....+|+||+++++++...+.+++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999999999999986543322233344556666665555699999999999999999999999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccC
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g 259 (544)
++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||+++ ....+||+|||++..... .....|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~---~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLE---NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceeccc---cccCCC
Confidence 99999998888899999999999999999999999999999999999994 445799999999876443 224568
Q ss_pred CccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccC
Q 009091 260 SAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338 (544)
Q Consensus 260 t~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 338 (544)
+..|+|||.+.+ .++.++||||||+++|+|++|..||...........+......++......++..+.++|.+||+.|
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 235 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence 899999998754 4789999999999999999999999888777777776665554444444467899999999999999
Q ss_pred cCCCCCh---hhhhCCCccccC
Q 009091 339 PKKRITS---AEVLEHPWMREG 357 (544)
Q Consensus 339 p~~Rps~---~ell~hp~f~~~ 357 (544)
|.+||++ +|+|.||||+..
T Consensus 236 p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 236 PAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHHccCCCcHHHHHcChHhhcC
Confidence 9999955 799999999753
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-42 Score=334.08 Aligned_cols=252 Identities=33% Similarity=0.536 Sum_probs=208.3
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||+|+||+||+|.+..+++.||+|.+.+...........+.+|+.+++.+. ||||+++++++...+.+|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 689999999999999999999999986544333334556678999999997 9999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccC
Q 009091 182 LFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259 (544)
Q Consensus 182 L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g 259 (544)
|.+++.... .+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||.+.............+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcchhhhccCCccccccC
Confidence 999987765 689999999999999999999999999999999999994 445799999999877654333344578
Q ss_pred CccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccC
Q 009091 260 SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338 (544)
Q Consensus 260 t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 338 (544)
+..|+|||++. +.++.++|||||||++|+|++|+.||...........+..............+++.+.++|.+||+.|
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence 88999999875 45888999999999999999999999765442222222222222222223356899999999999999
Q ss_pred cCCCC-----ChhhhhCCCccccC
Q 009091 339 PKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 339 p~~Rp-----s~~ell~hp~f~~~ 357 (544)
|.+|| ++.+++.||||+..
T Consensus 237 p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 237 PEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred hhHccCCCcccHHHHHhChhhhcC
Confidence 99999 88889999999754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=348.07 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=198.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++.+.||+|+||.||+|.+..++..||+|+..+. ....|+.+++++. ||||+++++++...+..++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCC-CCCCcChhheEEeCCeeEEE
Confidence 3599999999999999999999999999999975321 2346899999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||++. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+. ....+||+|||++.......
T Consensus 136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEecCccccccccCc
Confidence 99995 588888765 45689999999999999999999999999999999999994 44579999999997654433
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH----------HHHHHHHhC-Cc---cCC-
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK----------GIFDAILKG-GV---DFE- 316 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~----------~~~~~i~~~-~~---~~~- 316 (544)
......||+.|+|||++. ..++.++|||||||++|||+++..|+...... ..+..+... .. .++
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 344567999999999885 56899999999999999999866555332110 011111110 00 000
Q ss_pred -------------------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 317 -------------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 317 -------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
......++..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0001235677888999999999999999999999999975
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=326.09 Aligned_cols=251 Identities=25% Similarity=0.487 Sum_probs=215.8
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||+|++|.||+|.+..++..|++|.+..... .......+.+|+.++++++ ||||+++++++...+..++|||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEEE
Confidence 7788999999999999999999999999998865432 3445677889999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|++|++|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++. +..++|+|||++........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~---~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA---YDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC---CCCEEEcccccceeccCccc
Confidence 99999999998774 56899999999999999999999999999999999999954 45799999999887654322
Q ss_pred -eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 -YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 -~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....|++.|+|||++. ..++.++|+|||||++|+|++|..||...........+..+...... ..++..+.++|
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i 233 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQLI 233 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHHH
Confidence 23457889999999875 45789999999999999999999999888776666666655432211 25788999999
Q ss_pred HHhcccCcCCCCChhhhhCCCcc
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.+||+.+|++||++.++++|||+
T Consensus 234 ~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 234 DQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHccCCcccCcCHHHHhhCCCC
Confidence 99999999999999999999995
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=330.74 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=206.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..++..||+|++.... .......+.+|+.+++++. ||||+++++++...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEE
Confidence 4788899999999999999999999999999885432 2334467889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++ .++.++|+|||++...... ..
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~-~~ 150 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNS-IA 150 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceecccc-cc
Confidence 99999988654 3578999999999999999999999999999999999994 4557999999999765432 22
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh-------HHHHHHHHhCCccCCCCcccCCCHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE-------KGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
....|+..|+|||++. ..++.++|+|||||++|+|++|..||..... ......+..... +..+...++++
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 228 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVGQFSEK 228 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCCcCCHH
Confidence 3468999999999885 4589999999999999999999999965321 122222222211 11122346889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.++|.+||+.||.+||+++++++||||....
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 99999999999999999999999999998763
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=333.00 Aligned_cols=253 Identities=28% Similarity=0.445 Sum_probs=205.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||+|++|.||+|.+..++..||+|++..... .......+.+|+.+++.+. ||||+++++++..++.+++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEEe
Confidence 7889999999999999999999999999998854321 2233467788999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 176 LCSGGELFDKIIAQ---GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 176 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|++ ++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccceeecCCCc
Confidence 997 5888887653 4589999999999999999999999999999999999994 4457999999998755322
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc---------------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD--------------- 314 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~--------------- 314 (544)
.......+++.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 12233467899999998753 4788999999999999999999999876554333222111000
Q ss_pred ----------CCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 ----------FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 ----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
........+++++.++|.+||..||.+|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0001123468899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=325.04 Aligned_cols=251 Identities=25% Similarity=0.505 Sum_probs=211.4
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-RQSVHLVM 174 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~ 174 (544)
|++.+.||.|++|.||++.+..++..+|+|.+..... .....+.+.+|+.++++++ |+||+++++.+.. ...++++|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEEe
Confidence 8899999999999999999999999999999854322 2334567889999999997 9999999988764 45689999
Q ss_pred eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 175 ELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 175 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
||+++++|.+++... ..+++..++.++.+++.||.+||+.||+||||||+||+++ ..+.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEEecccC
Confidence 999999999998763 4589999999999999999999999999999999999994 4457999999999866432
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
.......|++.|+|||++. ..++.++|+||||+++|+|++|+.||...........+..+.... ....+++.+.++
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 233 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGEL 233 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHHH
Confidence 2223457899999999875 458889999999999999999999998777666655555543321 123578999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
|.+||+.||.+||++.++++||||
T Consensus 234 i~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 234 IATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHhccCcccCCCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=334.07 Aligned_cols=263 Identities=29% Similarity=0.498 Sum_probs=216.1
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+...+|++.+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+. |+||+++++++...+..
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 91 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEE
Confidence 34567999999999999999999999999999999885432 233466889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.++|+|||++.....
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITP 167 (297)
T ss_pred EEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCccceEccC
Confidence 999999999999998864 4689999999999999999999999999999999999994 445799999999876544
Q ss_pred CCc-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GKV-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
... .....|++.|+|||.+. ..++.++|+|||||++|+|++|..||...........+...... .......++..++
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPERLSAVFR 246 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC-CCCCccccCHHHH
Confidence 322 23457889999999875 45889999999999999999999999776543332222222111 1112235688899
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
+||.+||..||.+||+++++++||||........
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence 9999999999999999999999999987654443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=333.55 Aligned_cols=258 Identities=28% Similarity=0.390 Sum_probs=211.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++++. |+||+++++.+...+.+++||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEEE
Confidence 5889999999999999999999999999999885421 2334567889999999996 999999999999999999999
Q ss_pred eccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 175 ELCSGGELFDKIIAQ---GHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 175 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+++++|..++... ..+++..+..++.|++.||.|||+ .||+||||||+||+++. +..+||+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG---NGQVKLCDFGVSGNLVA 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC---CCCEEEeecCCcccccC
Confidence 999999998888763 368999999999999999999996 59999999999999954 45799999999876543
Q ss_pred CCceecccCCccccCcccccc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 251 GKVYRDIVGSAYYVAPEVLRR-------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
. ......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+.......+......+
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd06622 156 S-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGY 234 (286)
T ss_pred C-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCccc
Confidence 2 2234568889999998742 2578999999999999999999999766554433332221111111112247
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+.++.++|.+||..+|.+||++.+++.||||.....
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 235 SDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 899999999999999999999999999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=336.39 Aligned_cols=254 Identities=26% Similarity=0.455 Sum_probs=204.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|+||.||+|.+..+|..+|+|.+..... .......+.+|+.+++++. ||||+++++++.+.+.+++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEE
Confidence 48889999999999999999999999999999865322 2223356778999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-C
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-K 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~ 252 (544)
||+++ +|.+++.. .+.+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++...... .
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCCCC
Confidence 99975 78887765 56789999999999999999999999999999999999995 4457999999998865432 2
Q ss_pred ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhCCc--------------c-
Q 009091 253 VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGV--------------D- 314 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~~~--------------~- 314 (544)
......++..|+|||++.+ .++.++|||||||++|+|++|..||... +....+..+..... .
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 2234567899999998754 3789999999999999999999986543 33333333322100 0
Q ss_pred --CCC--------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 --FES--------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 --~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
++. .....+++++++||.+||+.||.+|||+++++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000 0112468899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=331.43 Aligned_cols=250 Identities=30% Similarity=0.442 Sum_probs=200.5
Q ss_pred eecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhc--cCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL--SGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l--~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
.||+|+||.||++.+..++..+|+|.+.+.............+|..+++.+ .+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999988655433222233344555444443 248999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceeccc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 258 (544)
+++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+|||++ .+..++|+|||++........ ....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKP-HASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCcceeccccCc-cCcC
Confidence 999999998888899999999999999999999999999999999999994 445799999999876543222 2357
Q ss_pred CCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH--HHHHHHHhCCccCCCCcccCCCHHHHHHHHHh
Q 009091 259 GSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEK--GIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334 (544)
Q Consensus 259 gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 334 (544)
|+..|+|||.+. ..++.++|||||||++|+|++|..||...... ....... ..........+++++.++|.+|
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~ 233 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---LTVNVELPDSFSPELKSLLEGL 233 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---hcCCcCCccccCHHHHHHHHHH
Confidence 899999999875 34789999999999999999999999754322 1122111 1112222235789999999999
Q ss_pred cccCcCCCC-----ChhhhhCCCccccC
Q 009091 335 LIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 335 l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
|..||.+|| ++.++++||||+..
T Consensus 234 l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 234 LQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred hcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 999999999 69999999999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=331.10 Aligned_cols=252 Identities=28% Similarity=0.462 Sum_probs=216.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||.|+||.||+|.+..++..||+|++.+.........+.+.+|+++++++. ||||+++++.+......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 3889999999999999999999999999999997655444455678899999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
||+.|++|.+++.....+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++.........
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~~ 156 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLT 156 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeecccccccCCCccc
Confidence 9999999999998877899999999999999999999999999999999999994 4457999999998876554334
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE---KGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
....|+..|+|||++. ..++.++|+||||+++|+|++|..||..... ............ .....++..+.++
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV----LYPATWSTEAIDA 232 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccc----cCcccCcHHHHHH
Confidence 4567889999999886 4479999999999999999999999987764 222222221211 1223468999999
Q ss_pred HHHhcccCcCCCCCh--hhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITS--AEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~--~ell~hp~f 354 (544)
|.+||..||.+||++ .|+++||||
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcCCCC
Confidence 999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=325.05 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=216.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++++. ||||+++++.+...+.+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEE
Confidence 48899999999999999999999999999999865433 3344678899999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+++... ..+++..+..++.+++.||.|||++||+|+||+|+||+++.+ ...+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH--KMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEccCCCceecCCCc
Confidence 999999999999764 348999999999999999999999999999999999999543 2468999999998776554
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
......|+..|+|||.+. ..++.++|+||||+++|+|++|..||...........+....... ....++..+.++|
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 233 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLI 233 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHH
Confidence 444567899999999886 457889999999999999999999998877666665555443221 1124788999999
Q ss_pred HHhcccCcCCCCChhhhhCCCcc
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.+||..||.+|||+.++++||||
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=331.71 Aligned_cols=257 Identities=30% Similarity=0.518 Sum_probs=216.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
..+|++.+.||.|++|.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.+. ||||+++++++...+.+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEE
Confidence 356999999999999999999999999999999885432 234567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|+||+++++|..++.. ..+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 94 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccchhccccc
Confidence 9999999999988765 4689999999999999999999999999999999999994 44579999999988654432
Q ss_pred c-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 V-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 ~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
. .....|+..|+|||.+. ..++.++|+|||||++|+|++|..||...........+...... .......+++.+.++
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 248 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSPIFRDF 248 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCCHHHHHH
Confidence 2 23357889999999876 45889999999999999999999999887665544444433221 112233578899999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
|.+||..||.+||++.+++.||||+...
T Consensus 249 i~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 249 LNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 9999999999999999999999998654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=335.23 Aligned_cols=263 Identities=28% Similarity=0.442 Sum_probs=214.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC--hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN--KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+|.+.+.||.|++|.||+|.+..++..||+|.+....... ......+.+|+.++++++ |+||+++++++...+..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 4888899999999999999999999999999986544321 222345678999999998 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+|+||+|+|||++ .++.++|+|||++......
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeeeeccCC
Confidence 99999 889999998766 799999999999999999999999999999999999995 4457999999999876543
Q ss_pred -CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC-----------
Q 009091 252 -KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES----------- 317 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~----------- 317 (544)
.......+++.|+|||.+. ..++.++|+|||||++|+|++|..||.+......+..+.........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 2223346788999999874 35788999999999999999998888776655444444321100000
Q ss_pred -------------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 318 -------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 318 -------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
......+..+.++|.+||.+||.+|||+.++|.||||++...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 001234788999999999999999999999999999999876654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-41 Score=326.70 Aligned_cols=253 Identities=25% Similarity=0.441 Sum_probs=209.0
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc---ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV---NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
|++++.||.|+||.||+|.+. +++.+|+|.+...... .......+.+|+.+++++. |+||+++++++...+.+++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred ccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEEE
Confidence 788999999999999999864 7889999988543211 1223456889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC--
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-- 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-- 250 (544)
||||+++++|.+++.+...+++..+..++.|++.||.|||+.||+|+||+|+||++. .++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhhHhhhhcc
Confidence 999999999999998888899999999999999999999999999999999999994 445799999999876432
Q ss_pred -----CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 251 -----GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 251 -----~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
........|+..|+|||++. ..++.++|+|||||++|+|++|..||...........+.......+ .....++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP-RLPDSFS 235 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC-CCCCCCC
Confidence 11122456899999999886 4578999999999999999999999987655443333332211111 1223578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.++.++|.+||..+|.+||++.++++||||
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=330.36 Aligned_cols=271 Identities=25% Similarity=0.443 Sum_probs=220.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|+..+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++++. |+||+++++++.+.+.+++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEE
Confidence 45888899999999999999999899999999885432 2344567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||++|++|.+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||+++. +..++|+|||++........
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE---QGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC---CCCEEEcccccceeccCCcc
Confidence 999999999998864 57899999999999999999999999999999999999954 45799999999977654322
Q ss_pred -eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 -YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 -~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....++..|+|||++. ..++.++|+|||||++|+|++|..||...........+..... ......++..+.++|
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li 233 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEFI 233 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHHH
Confidence 23346888999999875 4588999999999999999999999987766555444333221 111224678899999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHH
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~ 376 (544)
.+||..+|.+||++.++++||||...... ....+..+.+++++
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~~~~~~~~~~--~~~~~~~~~~~~~~ 276 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKHKFIVKNAKK--TSYLTELIDRFKRW 276 (277)
T ss_pred HHHcccCcccCcCHHHHHhChHhhhcchh--hhHHHHHHHHHHhc
Confidence 99999999999999999999999775432 22334445555543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=330.66 Aligned_cols=253 Identities=28% Similarity=0.473 Sum_probs=207.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED------ 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------ 166 (544)
...|++.+.||.|+||.||+|.+..++..+|+|++... ......+..|+.+++++.+|+||+++++++..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 34699999999999999999999999999999987432 23345688899999999779999999998852
Q ss_pred CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...++++|||+++++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||+
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg~ 167 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGV 167 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcc
Confidence 46789999999999999988763 3488888999999999999999999999999999999995 445799999999
Q ss_pred cccccCC-CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC
Q 009091 245 SVFIDEG-KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317 (544)
Q Consensus 245 a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 317 (544)
+...... .......|++.|+|||++. ..++.++|+|||||++|+|++|..||...........+..... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~ 245 (282)
T cd06636 168 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--PK 245 (282)
T ss_pred hhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--CC
Confidence 8765432 1223457899999999874 3478899999999999999999999976654443333322211 11
Q ss_pred CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 318 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.....++..+.+||.+||..||.+||++.+||+||||
T Consensus 246 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 246 LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 1223578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=345.27 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=202.6
Q ss_pred cccceecceecccCCeEEEEEEE-----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTE-----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++++.||+|+||.||+|.+ ..++..||||++.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 34699999999999999999974 3456789999885432 2334567889999999996699999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC---------------------------------------------------------
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG--------------------------------------------------------- 190 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 190 (544)
+..++|||||+||+|.+++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999999886532
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 191 ------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 191 ------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
.+++..+..++.||+.||.|||++||+||||||+|||++. +..+||+|||++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH---GRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC---CCcEEEecCccceeccCcc
Confidence 3677888999999999999999999999999999999954 4579999999998664432
Q ss_pred ce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 253 VY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 253 ~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.. ....++..|+|||++. ..++.++|||||||++|||++ |..||.....................+ ...+.++
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 346 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSP--ECAPSEM 346 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCC--CCCCHHH
Confidence 11 1234556799999875 568999999999999999998 889997765444333333333322222 2468899
Q ss_pred HHHHHHhcccCcCCCCChhhhhCC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~h 351 (544)
++||.+||+.||++||++.++++.
T Consensus 347 ~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 347 YDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHccCChhHCcCHHHHHHH
Confidence 999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=329.23 Aligned_cols=258 Identities=26% Similarity=0.424 Sum_probs=210.1
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR-- 167 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 167 (544)
....+.|.+.+.||+|+||.||+|.+..++..+|+|++... ......+.+|+.+++++.+||||+++++++...
T Consensus 18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~----~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI----SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc----ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 34456799999999999999999999999999999988532 123456778999999996699999999998643
Q ss_pred ---CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 168 ---QSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
+.+++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+||+++. ++.+||+
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~---~~~~kl~ 170 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLV 170 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC---CCCEEEe
Confidence 468999999999999988753 356899999999999999999999999999999999999944 4569999
Q ss_pred ecCCcccccCCC-ceecccCCccccCcccccc------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc
Q 009091 241 DFGLSVFIDEGK-VYRDIVGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 241 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~ 313 (544)
|||++....... ......|+..|+|||++.. .++.++|||||||++|+|++|+.||........+..+.....
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~ 250 (291)
T cd06639 171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP 250 (291)
T ss_pred ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC
Confidence 999988654322 2234578899999998742 268899999999999999999999987665554444443322
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
... .....++..+.++|.+||+.||.+||++.++++||||+
T Consensus 251 ~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 251 PTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 111 11123567899999999999999999999999999994
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=329.82 Aligned_cols=259 Identities=27% Similarity=0.443 Sum_probs=208.8
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE--
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-- 165 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 165 (544)
......++|++.+.||+|+||.||+|.+..++..+|+|++.... .....+.+|+.+++++.+||||+++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34455677999999999999999999999999999999874321 223567889999999966999999999874
Q ss_pred ---eCCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEE
Q 009091 166 ---DRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 166 ---~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vk 238 (544)
..+.+++||||++|++|.+++.. ...+++..++.++.|++.||.|||+.+|+||||||+||+++. ++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~---~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC---CCCEE
Confidence 34678999999999999988753 345889999999999999999999999999999999999954 44699
Q ss_pred EeecCCcccccCCC-ceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC
Q 009091 239 ATDFGLSVFIDEGK-VYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311 (544)
Q Consensus 239 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~ 311 (544)
|+|||++....... ......|++.|+|||++. ..++.++|||||||++|+|++|..||...........+...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~ 244 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN 244 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc
Confidence 99999988664322 223457899999999874 34788999999999999999999999876554433333222
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.. ........++..+.++|.+||+.||.+|||+.++++|+||
T Consensus 245 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 245 PP-PTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CC-CcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 11 1111112357889999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=344.57 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=203.2
Q ss_pred cccceecceecccCCeEEEEEEECCC-----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST-----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++++.||+|+||.||+|.+... +..||+|++.... .....+.+.+|+.+++.+.+|+||+++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 45699999999999999999986543 3579999885432 2334567889999999995599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHc----------------------------------------------------------
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ---------------------------------------------------------- 189 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~---------------------------------------------------------- 189 (544)
+.+++||||+++|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999988642
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce---
Q 009091 190 ------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY--- 254 (544)
Q Consensus 190 ------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~--- 254 (544)
..++...++.++.|++.||.|||++||+||||||+|||++ .+..+||+|||++.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeec
Confidence 1367788999999999999999999999999999999995 4457999999999865433211
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....++..|+|||++. ..++.++|||||||++|+|++ |..||...........+.........+ ..+++++.++|.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~ 349 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP--DFAPPEIYSIMK 349 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCC--CCCCHHHHHHHH
Confidence 1223556799999875 568999999999999999997 999998765554444444443333222 246899999999
Q ss_pred HhcccCcCCCCChhhhhC
Q 009091 333 KMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~ 350 (544)
+||+.||.+|||+.++++
T Consensus 350 ~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 350 MCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=321.98 Aligned_cols=252 Identities=30% Similarity=0.512 Sum_probs=217.3
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||.|+||.||.+++..++..+++|.+..... .......+.+|+.+++++. |+||+++++++.+.+.++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEE
Confidence 48899999999999999999999999999998865432 2344567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++. +..+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~---~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK---AGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC---CCCEEECcCcceEEccccc
Confidence 999999999999775 45899999999999999999999999999999999999954 4579999999998764433
Q ss_pred -ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......|++.|+|||++.+ .++.++|+||||+++|+|++|..||...........+..+...... ..++.++.++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---SVYSSELISL 232 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2234578999999998754 5788999999999999999999999887777777777665443222 3578999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
|.+||.++|.+||++.++|+|||+
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=330.06 Aligned_cols=257 Identities=27% Similarity=0.458 Sum_probs=213.3
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|.+.+.||+|+||.||+|.+..++..||+|++.............+.+|+.+++.+. ||||+++++++...+..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEE
Confidence 3456999999999999999999999899999999886543333444567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+.| +|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|+|||++.....
T Consensus 92 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcceecCC
Confidence 99999974 77776654 45689999999999999999999999999999999999994 445799999999876543
Q ss_pred CCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
. ....|++.|+|||++. +.++.++||||||+++|+|++|..||...........+...... ......++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (307)
T cd06607 168 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLSSNDWSDY 242 (307)
T ss_pred C---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCC--CCCchhhCHH
Confidence 2 2456888999999873 45888999999999999999999999877665544444332211 1112246789
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.++|.+||..||.+||++.+++.||||....
T Consensus 243 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 243 FRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=355.03 Aligned_cols=263 Identities=21% Similarity=0.295 Sum_probs=194.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCC-eEEEE--------------EEeeccccChhcHHHHHHHHHHHHhccCC
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGN-SYACK--------------SILKRKLVNKQDREDIKREIQIMQHLSGQ 154 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-~~avK--------------~~~~~~~~~~~~~~~~~~E~~~l~~l~~h 154 (544)
..+.++|++++.||+|+||+||+|..+.... ..+.| .+.+...........+.+|+.+|+++. |
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-H 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-C
Confidence 3456789999999999999999987653222 22222 111111112233456789999999997 9
Q ss_pred CCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 155 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
|||+++++++...+..|+|+|++. ++|..++... .......++.++.||+.||.|||++||+||||||+|||++
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN 301 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 999999999999999999999995 5777776542 2234667888999999999999999999999999999994
Q ss_pred cCCCCccEEEeecCCcccccCCCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---hHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET---EKG 303 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~---~~~ 303 (544)
.++.+||+|||++..+..... ....+||..|+|||++. ..++.++|||||||++|||++|..++.... ...
T Consensus 302 ---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 302 ---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred ---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 445799999999987654322 23467999999999986 458999999999999999999886554322 111
Q ss_pred HHHHHHhCC----ccCCCC------------------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 304 IFDAILKGG----VDFESE------------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 304 ~~~~i~~~~----~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
.+..+.... ..++.. ....++..+.++|.+||++||.+|||+.|+|.||||.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 121111100 000000 0113566788999999999999999999999999997
Q ss_pred cC
Q 009091 356 EG 357 (544)
Q Consensus 356 ~~ 357 (544)
..
T Consensus 459 ~~ 460 (501)
T PHA03210 459 AE 460 (501)
T ss_pred cC
Confidence 65
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=324.31 Aligned_cols=253 Identities=30% Similarity=0.489 Sum_probs=213.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||.|+||.||+|.+..++..+++|++.... ....+.+.+|+.+++++. ||||+++++++...+.++++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEEE
Confidence 45999999999999999999999899999999986432 235678899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhhhhhh
Confidence 9999999999998776 7899999999999999999999999999999999999995 44579999999988765422
Q ss_pred -ceecccCCccccCccccc-c---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC-CcccCCCHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-R---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES-EPWLLISDS 326 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 326 (544)
......|+..|+|||.+. . .++.++|+||||+++|+|++|..||...........+......... .....++.+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPV 235 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHH
Confidence 223457889999999875 3 5788999999999999999999999877655544444433222111 111235778
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
+.++|.+||..+|.+|||+.+++.|+|
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 236 FHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=326.25 Aligned_cols=248 Identities=24% Similarity=0.414 Sum_probs=199.7
Q ss_pred ccceeccee--cccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 94 QFYTLGKEL--GRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 94 ~~y~~~~~l--g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.|.+.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.....+.+||||+++++.+...+.++
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 346666665 99999999999999999999999885432211 13333333446999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++.....+++..++.++.|++.||.|||+.|++||||||+||++...+ ..++|+|||++......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK--DRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC--CeEEEecCccceecCCC
Confidence 9999999999999998888899999999999999999999999999999999999995433 26999999998766432
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHH-HHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF-DAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
....|+..|+|||++. ..++.++|+||||+++|+|++|..||......... ..+... .....+....+++.+.+
T Consensus 164 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (267)
T PHA03390 164 ---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR-QQKKLPFIKNVSKNAND 239 (267)
T ss_pred ---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh-hcccCCcccccCHHHHH
Confidence 2346899999999886 46889999999999999999999999865443321 111111 12222233368999999
Q ss_pred HHHHhcccCcCCCCC-hhhhhCCCccc
Q 009091 330 LVRKMLIQDPKKRIT-SAEVLEHPWMR 355 (544)
Q Consensus 330 li~~~l~~dp~~Rps-~~ell~hp~f~ 355 (544)
||.+||+.||.+||+ ++++|+||||+
T Consensus 240 li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 240 FVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred HHHHHhccChhhCCchHHHHhcCCccc
Confidence 999999999999996 59999999996
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=324.77 Aligned_cols=254 Identities=28% Similarity=0.487 Sum_probs=207.3
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC--hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN--KQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~ 170 (544)
.|++.+.||+|+||.||+|.+..++..||+|.+....... ......+.+|+.++++++ ||||+++++++.. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEE
Confidence 3888999999999999999999999999999886543211 233456889999999997 9999999998865 4678
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++++||+++++|.+++...+.+++..++.++.|++.||.|||+.+|+||||||+||+++ .+..+||+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCCCcccccc
Confidence 99999999999999998888899999999999999999999999999999999999994 445799999999876532
Q ss_pred C----CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 G----KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~----~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
. .......|+..|+|||.+. ..++.++|+|||||++|+|++|+.||...........+....... .....+++
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP--QLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC--CCchhcCH
Confidence 1 1122346889999999885 458899999999999999999999998765544443333222111 11124678
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
.++++| +||..+|.+||+++++++||||+
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 889999 67778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=326.57 Aligned_cols=256 Identities=24% Similarity=0.460 Sum_probs=210.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-------hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-------KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
+|.+.+.||.|+||.||+|.+..++..+|+|.+....... ....+.+.+|+.+++.++ ||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 4888999999999999999999899999999885432111 112356788999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+..++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||++. .++.++|+|||++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeecccccc
Confidence 99999999999999999998888899999999999999999999999999999999999994 455799999999876
Q ss_pred ccCCC---ceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc--cCCCCc
Q 009091 248 IDEGK---VYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV--DFESEP 319 (544)
Q Consensus 248 ~~~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~--~~~~~~ 319 (544)
..... ......|+..|+|||++.. .++.++|+||||+++|+|++|..||...........+..... .++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV 237 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccc
Confidence 54321 1223468899999998753 378899999999999999999999976554443333322221 222222
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
...++..+.++|.+||.+||.+||+++++|+||||
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 23568999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-41 Score=324.06 Aligned_cols=255 Identities=27% Similarity=0.483 Sum_probs=213.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|+||.||+|.+..+++.|++|.+..... .......+.+|+.+++++. |+||+++++.+...+.+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEE
Confidence 48899999999999999999998999999999865432 2345678899999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc-
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV- 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~- 253 (544)
||+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||+++. .+.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~---~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEcccccccccCCCCCc
Confidence 99999999999988777999999999999999999999999999999999999954 45799999999887654322
Q ss_pred ----eecccCCccccCcccccc-c---CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 254 ----YRDIVGSAYYVAPEVLRR-S---YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 254 ----~~~~~gt~~y~aPE~~~~-~---~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.....++..|+|||++.+ . ++.++||||||+++|+|++|..||.....................+.+..++.
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSP 235 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCH
Confidence 113467889999998853 2 78899999999999999999999976543332222222222223334445689
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.+.++|.+||+.+|.+||++.+++.|||+
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-42 Score=323.66 Aligned_cols=264 Identities=30% Similarity=0.442 Sum_probs=212.8
Q ss_pred CCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCC-C----CeeEEE
Q 009091 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-Q----NIVEFR 161 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~----~iv~~~ 161 (544)
...+.+..+|.+...+|+|.||.|-.+++..++..||||+++.- ...++...-|+++|+++..+ | -+|.+.
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 34456688999999999999999999999999999999988421 33456667899999999522 2 378888
Q ss_pred EEEEeCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC-------
Q 009091 162 GAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD------- 232 (544)
Q Consensus 162 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~------- 232 (544)
+||+..++.|||+|.+ |.|+.+++..++ +++...++.+++||++++.+||+.+++|.||||+|||+.+.+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEecc
Confidence 8999999999999999 779999998754 589999999999999999999999999999999999995422
Q ss_pred ----------CCccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh
Q 009091 233 ----------GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE 301 (544)
Q Consensus 233 ----------~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~ 301 (544)
....|+|+|||.|....+.. ...+.|..|+|||++. -+|+.++||||+||||+|++||...|+....
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 13469999999998766644 5678999999999875 5799999999999999999999999988775
Q ss_pred HH---HHHHHHh------------------CCccCCCCcc------------------c---CCCHHHHHHHHHhcccCc
Q 009091 302 KG---IFDAILK------------------GGVDFESEPW------------------L---LISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 302 ~~---~~~~i~~------------------~~~~~~~~~~------------------~---~~~~~~~~li~~~l~~dp 339 (544)
.+ +++.|+. +...++.... . .....+.|||++||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 54 2332221 1111110000 0 012357899999999999
Q ss_pred CCCCChhhhhCCCccccC
Q 009091 340 KKRITSAEVLEHPWMREG 357 (544)
Q Consensus 340 ~~Rps~~ell~hp~f~~~ 357 (544)
.+|+|+.|+|.||||+..
T Consensus 395 ~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 395 ARRITLREALSHPFFARL 412 (415)
T ss_pred cccccHHHHhcCHHhhcC
Confidence 999999999999999865
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=327.44 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=210.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC---hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN---KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
|+.++.||+|+||.||++.+..++..+|+|++....... ......+.+|+.++++++ |+||+++++++...+.+++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEEE
Confidence 788899999999999999999999999999886433211 123567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+++++|.+++...+.+++..+..++.||+.||.|||++|++|+||+|+||+++..+ ..+||+|||.+.......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~--~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG--QRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEEccccccccccccc
Confidence 999999999999998888899999999999999999999999999999999999995432 369999999987664321
Q ss_pred -----ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC-ccCCCCcccCCCH
Q 009091 253 -----VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG-VDFESEPWLLISD 325 (544)
Q Consensus 253 -----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~ 325 (544)
......|+..|+|||.+. ..++.++|+||||+++|+|++|..||...........+.... ..........+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSP 238 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCH
Confidence 112346889999999875 458899999999999999999999996544322222221110 0111112234688
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
.+.++|.+||..||.+||++.++++||||+
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=322.63 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=213.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccc--cChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL--VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+|+..+.||+|++|.||+|.+..++..|++|.+..... ......+.+.+|+.+++.+. |+||+++++++.....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 47788999999999999999998999999998865332 12334567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
++||+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+||+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccceeccccc
Confidence 999999999999998887899999999999999999999999999999999999994 44579999999988765444
Q ss_pred ceecccCCccccCccccc-cc-CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~-~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......|+..|+|||.+. .. ++.++|+||||+++|+|++|..||...........+...... ......+++.+.++
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 234 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL--PPIPDHLSDEAKDF 234 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC--CCcCCCcCHHHHHH
Confidence 334567899999999875 33 789999999999999999999999776644444333321111 11123568999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
|.+||+.+|.+||++.+++.|||+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=323.63 Aligned_cols=254 Identities=27% Similarity=0.487 Sum_probs=208.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc--ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV--NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~ 170 (544)
.|++++.||+|+||.||++.+..++..||+|.+...... .....+.+.+|+.+++++. ||||+++++++.+. ..+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCceE
Confidence 489999999999999999999999999999987543211 1233567889999999997 99999999988763 568
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+++|||+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||||+|||++ .++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCcccccccc
Confidence 89999999999999998877899999999999999999999999999999999999994 445799999999876532
Q ss_pred C----CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 G----KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~----~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
. .......|+..|+|||++. ..++.++|+|||||++|+|++|+.||...........+....... .....++.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 236 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP--VLPPHVSD 236 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC--CCchhhCH
Confidence 1 1122356889999999875 458899999999999999999999998765544444433222111 11224678
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
.+.++|.+||. +|++||+++++++|||+.
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 89999999995 999999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=322.76 Aligned_cols=252 Identities=27% Similarity=0.545 Sum_probs=215.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++++. ||||+++++++...+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEE
Confidence 48899999999999999999999999999999865432 2334567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+.+.... .+++..+..++.|++.||.|||++|++|+||+|+|||++. +..++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~---~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---DGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEEeeccceeecCcch
Confidence 9999999999887643 5789999999999999999999999999999999999944 4579999999997664432
Q ss_pred c-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 V-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 ~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
. .....|++.|+|||++. ..++.++|+|||||++|+|++|..||...........+..+..... ...++.++.++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 232 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNL 232 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC---cccCCHHHHHH
Confidence 2 22346889999999875 4578899999999999999999999988877777777666543221 23568899999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
|.+||+.+|.+||++.++++||||
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=323.61 Aligned_cols=251 Identities=26% Similarity=0.462 Sum_probs=210.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||.|+||.||+|.+..++..+++|.+.... ..+.+.+|+.+++++. |+||+++++++.....+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEE
Confidence 45899999999999999999999889999999885432 2678899999999996 99999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
+||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcccCc
Confidence 999999999999876 45689999999999999999999999999999999999995 44579999999998765433
Q ss_pred -ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......|+..|+|||++. ..++.++||||||+++|+|++|+.||...........+...... .......++..+.++
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 232 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TLSDPEKWSPEFNDF 232 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CCCchhhcCHHHHHH
Confidence 223456889999999875 45888999999999999999999999876554443333222111 111122467899999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
|.+||+.||.+|||+.++|.||||
T Consensus 233 i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 233 VKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=335.45 Aligned_cols=249 Identities=27% Similarity=0.445 Sum_probs=190.9
Q ss_pred cceecccCCeEEEEEEECC--CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCCeEEEEE
Q 009091 99 GKELGRGQFGITYLCTENS--TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE--DRQSVHLVM 174 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--~~~~~~lv~ 174 (544)
+.+||+|+||+||+|.+.. ++..||+|.+.... ....+.+|+.+++++. ||||+++++++. ....+++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEE
Confidence 4689999999999999654 56789999875322 2345778999999997 999999999885 356789999
Q ss_pred eccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC-CCCccEEEeecCC
Q 009091 175 ELCSGGELFDKIIAQ---------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK-DGGAMLKATDFGL 244 (544)
Q Consensus 175 e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~-~~~~~vkl~Dfg~ 244 (544)
||+.+ +|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+..+ +..+.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99965 787777531 247889999999999999999999999999999999999543 2446899999999
Q ss_pred cccccCCC----ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChH---------HHHHHHH
Q 009091 245 SVFIDEGK----VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEK---------GIFDAIL 309 (544)
Q Consensus 245 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---------~~~~~i~ 309 (544)
++...... ......||+.|+|||++.+ .++.++|||||||++|||+||..||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 98764322 1234578999999998853 4789999999999999999999999653321 1111111
Q ss_pred hCCc--------------c------------CC--------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 310 KGGV--------------D------------FE--------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 310 ~~~~--------------~------------~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.... . .. .......+..+.+||.+||..||.+|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0000 0 00 00001235678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=329.28 Aligned_cols=255 Identities=30% Similarity=0.507 Sum_probs=210.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|++|.||+|.+..++..||+|++..... .......+.+|+.+++++. ||||+++++++.....+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 48899999999999999999999999999999865432 2334567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
||+ +++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++. .+.++|+|||++.......
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~---~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC---CCcEEEeeeeecccccCCCC
Confidence 999 9999998865 456899999999999999999999999999999999999954 4579999999988765432
Q ss_pred -ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc---------------
Q 009091 253 -VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD--------------- 314 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~--------------- 314 (544)
......|+..|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2334578999999998753 4689999999999999999998888776665554444321100
Q ss_pred ----CCCC-------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 315 ----FESE-------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 315 ----~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
++.. .....+..+.++|.+||..||.+|||++++|+||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0000 0124578899999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-41 Score=331.97 Aligned_cols=263 Identities=28% Similarity=0.420 Sum_probs=212.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~ 171 (544)
+.|++.+.||+|+||.||+|.+..++..||+|++...... ......+.+|+.++++++ |+||+++++++... +.++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeEE
Confidence 4599999999999999999999999999999988654321 122234568999999997 99999999998754 5689
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.|++||||||+||+++ ..+.+||+|||++.....
T Consensus 85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceeeecCC
Confidence 99999965 88888876 36689999999999999999999999999999999999994 445799999999987654
Q ss_pred C-CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc--------------
Q 009091 251 G-KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV-------------- 313 (544)
Q Consensus 251 ~-~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~-------------- 313 (544)
. .......+++.|+|||++. ..++.++|||||||++|+|++|..||.+.+....+..+.....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 3 2223345678899999875 3478999999999999999999999988877766655543211
Q ss_pred -----cCCCCc-------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 314 -----DFESEP-------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 314 -----~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
.....+ ....++.+.+||.+||.+||++|||+.++|+||||+....+-.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~ 301 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCE 301 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCC
Confidence 111111 1125788999999999999999999999999999998766543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=330.07 Aligned_cols=257 Identities=30% Similarity=0.416 Sum_probs=206.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe-----
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS----- 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~----- 169 (544)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ........+.+|+.+++.+.+||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 5889999999999999999999999999999875432 2222345678899999999878999999999876655
Q ss_pred EEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 170 VHLVMELCSGGELFDKIIAQ-----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
.|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.. ...+||+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~--~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ--KGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC--CCeEEEeeccc
Confidence 8999999986 888887653 347999999999999999999999999999999999999542 45799999999
Q ss_pred cccccCC-CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC-----
Q 009091 245 SVFIDEG-KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE----- 316 (544)
Q Consensus 245 a~~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~----- 316 (544)
+...... .......+++.|+|||++. ..++.++||||||+++|+|++|..||.+.+.......+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 8765332 2222346788999999875 3478999999999999999999999987766554433332100000
Q ss_pred -------------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 317 -------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 317 -------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
......++.++.+||.+||.+||.+||++.++|.||||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 000124688999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=324.76 Aligned_cols=256 Identities=30% Similarity=0.543 Sum_probs=230.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|..+..||.|+||.|.+|..+.+...+|||++++.......+.+--..|-++|......|.++.++.+|..-+++|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 34888999999999999999999999999999998877666666666667888887776789999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc-ccCCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF-IDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~-~~~~~ 252 (544)
|||+.||+|--.+..-+++-+..+..++.+|+-||-+||++||++||||.+|||| +.+++|||+|||+++. +..+.
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCc
Confidence 9999999998888888999999999999999999999999999999999999999 6677899999999986 34555
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
...+++|||.|+|||++. .+|+.++|+||+||+||||+.|.+||.+..+.+++.+|......++. .+|.++.+++
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~ic 581 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVAIC 581 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHHHH
Confidence 667899999999999886 78999999999999999999999999999999999999998877765 4799999999
Q ss_pred HHhcccCcCCCCCh-----hhhhCCCcccc
Q 009091 332 RKMLIQDPKKRITS-----AEVLEHPWMRE 356 (544)
Q Consensus 332 ~~~l~~dp~~Rps~-----~ell~hp~f~~ 356 (544)
+..|.+.|.+|.-+ .+|-.||||+.
T Consensus 582 kg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 582 KGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred HHHhhcCCccccCCCCccccchhhCcchhh
Confidence 99999999999865 57889999974
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=328.94 Aligned_cols=252 Identities=30% Similarity=0.487 Sum_probs=205.2
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSVHLV 173 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv 173 (544)
|++.+.||+|+||.||+|.+..++..+|+|++..... .. ......+|+.++.++.+|+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6778899999999999999999999999998854321 11 2233457999999997799999999999887 899999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+++ +|.+.+... ..+++..++.++.|++.||.|||+.||+||||+|+||+++. +.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD----DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC----CCeEEEecccccccccCC
Confidence 999975 888887764 56899999999999999999999999999999999999954 579999999998765544
Q ss_pred ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC----------------cc
Q 009091 253 VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG----------------VD 314 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~----------------~~ 314 (544)
......++..|+|||++. +.++.++|||||||++|||++|..||.+.+..+.+..+.... ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 444557899999999764 347889999999999999999999998776555444332210 00
Q ss_pred CCCC---------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 FESE---------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 ~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+..+ ....++..+.++|.+||.+||.+||+++++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0000 012467899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=340.80 Aligned_cols=247 Identities=35% Similarity=0.545 Sum_probs=213.3
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.+.|.+...+|.|+|+.|-.+.+..+++..++|++.+.. ....+|+.++....+||||+++.+.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4566888899999999999999999999999999996542 223467888888888999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+|||++.|+-|.+.+.....+. ..+..|+.+|+.|+.|||++|||||||||+|||+. +..+.++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchh
Confidence 9999999999988887766665 78888999999999999999999999999999995 24457999999999887654
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
..+.+-|..|.|||++. ..|+.++||||||++||+|++|..||...... ++...+..+.+. ..+|+++++
T Consensus 470 --~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~AKd 541 (612)
T KOG0603|consen 470 --CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDEAKD 541 (612)
T ss_pred --hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHHHHH
Confidence 34556788999999986 56999999999999999999999999877665 555555544333 468999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
||.+||+.||.+|+++.+++.||||.+
T Consensus 542 Ll~~LL~~dP~~Rl~~~~i~~h~w~~~ 568 (612)
T KOG0603|consen 542 LLQQLLQVDPALRLGADEIGAHPWFLS 568 (612)
T ss_pred HHHHhccCChhhCcChhhhccCcchhc
Confidence 999999999999999999999999933
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=353.86 Aligned_cols=246 Identities=24% Similarity=0.416 Sum_probs=215.0
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
...+..+.||+|+||+||+|... .....||||.++... +.+...+|.+|++++..|+ |||||+++|+|..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQ-HPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEccCC
Confidence 34567789999999999999853 345679999885543 4457789999999999998 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQG--------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~ 234 (544)
.+|+|+|||..|+|.++|+... .++..+.+.|+.||+.|+.||-++.+|||||-.+|+|| +.+
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---ccc
Confidence 9999999999999999997632 27788999999999999999999999999999999999 667
Q ss_pred ccEEEeecCCcccccCCCceecc---cCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHH
Q 009091 235 AMLKATDFGLSVFIDEGKVYRDI---VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAIL 309 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~ 309 (544)
..|||+|||+++.+...+.+... .-..+|||||.+. +.|+.+|||||+||+|||+++ |+.||++.+..+.++.+.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~ 719 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR 719 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence 79999999999988766554322 2356899999765 889999999999999999999 999999999999999999
Q ss_pred hCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhh
Q 009091 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEV 348 (544)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 348 (544)
.+.. ++.+ ..+|.++++|+..||+.+|++||++.||
T Consensus 720 ~g~l-L~~P--e~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 720 AGQL-LSCP--ENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred cCCc-ccCC--CCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 8877 4444 4789999999999999999999999997
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=326.08 Aligned_cols=254 Identities=30% Similarity=0.468 Sum_probs=209.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ---- 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 168 (544)
.++|++.+.||+|++|.||+|.+..+++.+++|++.... ...+.+.+|+.+++++.+|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 467999999999999999999999899999999885432 234678899999999966999999999997544
Q ss_pred --eEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 169 --SVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 169 --~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
.+++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~---~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK---NAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc---CCeEEECCC
Confidence 58999999999999998865 346899999999999999999999999999999999999954 457999999
Q ss_pred CCcccccCC-CceecccCCccccCcccccc------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC
Q 009091 243 GLSVFIDEG-KVYRDIVGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 243 g~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
|++...... .......|+..|+|||++.. .++.++|||||||++|+|++|..||...........+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 237 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPT 237 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCC
Confidence 998765432 22234568999999998742 36789999999999999999999998765555554444432211
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
......++..+++||.+||..||++|||+.++++|||+
T Consensus 238 -~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 238 -LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred -CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 11112367899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=332.33 Aligned_cols=261 Identities=29% Similarity=0.556 Sum_probs=215.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..+.|.....||+|+||.||++.+..++..||||.+... .....+.+.+|+.+++.+. |+||+++++.+...+..+
T Consensus 20 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 20 PREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELW 95 (292)
T ss_pred hHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEE
Confidence 345567678899999999999999999999999987432 2334567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++......
T Consensus 96 lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~---~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 96 VVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred EEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---CCCEEEccCcchhhcccc
Confidence 99999999999887754 56899999999999999999999999999999999999944 457999999998765332
Q ss_pred C-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 K-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
. ......|+..|+|||.+. ..++.++|+||||+++|||++|..||........+..+... ..........++..+.+
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 250 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-LPPRVKDSHKVSSVLRG 250 (292)
T ss_pred cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCccccccccCHHHHH
Confidence 2 223457899999999875 46889999999999999999999999877665555444332 11122222346889999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
+|.+||..||.+|||++++++||||.....++
T Consensus 251 li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 251 FLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred HHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 99999999999999999999999999876554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=325.38 Aligned_cols=249 Identities=29% Similarity=0.456 Sum_probs=200.2
Q ss_pred eecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhc--cCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL--SGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l--~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
.||+|+||.||+|.+..+++.||+|.+.+...........+..|..+++.+ .+||+|+.+++++...+.+++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998764433222222334444443332 248999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceeccc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 258 (544)
|++|..++...+.+++..++.++.|++.||.|||+.+|+||||||+||+++ .+..+||+|||++....... .....
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~~-~~~~~ 156 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKK-PHASV 156 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCccC-CcCcC
Confidence 999999998888899999999999999999999999999999999999994 44579999999987654322 23457
Q ss_pred CCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETE---KGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 259 gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
|+..|+|||++.+ .++.++||||+||++|+|++|..||..... .............. ...++..+.++|.+
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~s~~~~~li~~ 232 (278)
T cd05606 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL----PDSFSPELRSLLEG 232 (278)
T ss_pred CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCC----CCcCCHHHHHHHHH
Confidence 9999999999853 488999999999999999999999976632 22222222211111 22468999999999
Q ss_pred hcccCcCCCC-----ChhhhhCCCccccC
Q 009091 334 MLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 334 ~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
||..+|.+|| ++.++++||||+..
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 9999999999 99999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=330.42 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=199.7
Q ss_pred cccceecceecccCCeEEEEEEECC----------------CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS----------------TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~ 156 (544)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++.+++ |||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~n 80 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLK-DPN 80 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-CCC
Confidence 3569999999999999999998642 34479999885432 2334567889999999997 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcC-------------------CCCHHHHHHHHHHHHHHHHHHHHcCCE
Q 009091 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-------------------HYTEKAAAALCRAIVNVVHHCHFMGVM 217 (544)
Q Consensus 157 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~~~~~ql~~~l~~lH~~~iv 217 (544)
|+++++++...+..++||||+++++|.+++.... .++...+..++.||+.||.|||+.||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999886532 356778899999999999999999999
Q ss_pred eecCCCCceeeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh--
Q 009091 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-- 291 (544)
Q Consensus 218 HrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-- 291 (544)
||||||+|||++ .++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++
T Consensus 161 H~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 161 HRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred ccCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999994 445799999999986644322 12345678899999875 568999999999999999986
Q ss_pred CCCCCCCCChHHHHHHHHh----CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 292 GVPPFWAETEKGIFDAILK----GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 292 g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
+..||...........+.. ............++..+.+||.+||+.||.+|||+.+|.
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 6678877666555443321 111111111224688999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=331.72 Aligned_cols=255 Identities=27% Similarity=0.482 Sum_probs=208.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..++..||+|++.+... .....+.+.+|+++++.+. ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEEE
Confidence 58899999999999999999998999999998865432 2234566789999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-Cc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~ 253 (544)
||+++++|..+......+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.++|+|||++...... ..
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEEEeeeeeeeccCCccc
Confidence 9999988888776666799999999999999999999999999999999999994 4557999999998875433 22
Q ss_pred eecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC-------------------
Q 009091 254 YRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG------------------- 312 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~------------------- 312 (544)
.....++..|+|||++.+ .++.++||||||+++|+|++|..||...........+....
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence 234568899999998753 47889999999999999999999997665433332222100
Q ss_pred ccCCC--------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 313 VDFES--------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 313 ~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
...+. .....++..+.+|+.+||..+|.+||++.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00000 0122467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=327.08 Aligned_cols=256 Identities=25% Similarity=0.330 Sum_probs=205.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+..+|..||+|++..... ......+..|+.++.+..+||||+++++++...+..++||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 48899999999999999999999999999998865322 2233456667776555556999999999999999999999
Q ss_pred eccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 175 ELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 175 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
||++ ++|.+++.. ...+++..++.++.|++.||.|||++ +++||||||+|||++ .+..+||+|||++....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecccccccc
Confidence 9996 588777754 24589999999999999999999997 999999999999994 44579999999998765
Q ss_pred CCCceecccCCccccCccccc-----ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR-----RSYGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~~l~el~tg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
.........|+..|+|||++. ..++.++|+|||||++|+|++|..||.... ....+..+..+... ..+...+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 233 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP--QLPAEKF 233 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC--CCCcccc
Confidence 433333457889999999874 346889999999999999999999996532 22233333332111 1112247
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.++.++|.+||..+|.+||++.++++||||....
T Consensus 234 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 234 SPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 89999999999999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=326.82 Aligned_cols=254 Identities=28% Similarity=0.436 Sum_probs=211.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||.|+||.||+|.+..+++.+|+|.+.... .......+.+|+++++++. ||||+++++.+...+.+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 4778899999999999999999999999999886543 2345567889999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++. ++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~---~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS---RGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC---CCCEEEeecccchhhHHHH
Confidence 999999999999876 779999999999999999999999 99999999999999954 4579999999987654322
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-----hHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET-----EKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.. ...|+..|+|||.+. ..++.++||||||+++|+|++|..||.... .......+..... +..+...+++.
T Consensus 156 ~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 232 (265)
T cd06605 156 AK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP--PRLPSGKFSPD 232 (265)
T ss_pred hh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC--CCCChhhcCHH
Confidence 21 267889999999875 458899999999999999999999997542 2223333333211 11111127889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.++|.+||..||.+|||+.+++.||||+..
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 9999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=324.32 Aligned_cols=256 Identities=28% Similarity=0.501 Sum_probs=212.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~l 172 (544)
.|++.+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.+++.+. .||||+++++++......++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4788899999999999999999999999999885432 2344567889999999986 59999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+++++|.+++.. +.+++..++.++.|++.||.|||+.||+|+||+|+||+++. .+.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN---TGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC---CCCEEEccCCceeecCCCc
Confidence 9999999999998865 47899999999999999999999999999999999999954 4579999999998765432
Q ss_pred -ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||...........+.... .+......++.++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 233 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLLRE 233 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHHHH
Confidence 2234578999999998753 46889999999999999999999998765544433332221 111111236889999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+|.+||..||.+||++.+++.||||++..
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 99999999999999999999999998754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=323.45 Aligned_cols=248 Identities=17% Similarity=0.287 Sum_probs=205.2
Q ss_pred ccceecceecccCCeEEEEEEEC---CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
..|++.+.||+|+||.||+|+++ ..+..||+|.+.... .......+.+|+.+++++. ||||+++++++...+..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCc
Confidence 45899999999999999999865 346689999885432 2333467889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+++++|.+++... ..+++..++.++.|++.||+|||++|++||||||+|||++ .+..+|++|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCccccccc
Confidence 9999999999999998774 5689999999999999999999999999999999999994 45579999999876543
Q ss_pred CCCcee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGKVYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
...... ...++..|+|||++. ..++.++|||||||++||+++ |..||...........+..+. ..+ ....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 235 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-RLP--APRNCPN 235 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCC--CCCCCCH
Confidence 222111 224567899999875 568999999999999999775 999999888777777665542 222 2235789
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.+++.+||+.+|.+||++++|++
T Consensus 236 ~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 236 LLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHH
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=329.12 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=206.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++.++.+|+||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 36677889999999999999999999999998864332 2445678899999999977999999999999999999999
Q ss_pred eccCCCChHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 175 ELCSGGELFDKII-----AQGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 175 e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||+.+ +|.++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++. +..+||+|||++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR---NGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc---CCcEEEeecchhHHh
Confidence 99864 6554332 235699999999999999999999974 9999999999999954 457999999999876
Q ss_pred cCCCceecccCCccccCcccccc----cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCC-ccCCCCcccC
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLRR----SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG-VDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~ 322 (544)
..........|+..|+|||++.. .++.++|||||||++|+|++|+.||...... .....+..+. .......+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEERE 238 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCc
Confidence 54433344578999999998863 4889999999999999999999999765421 1222222221 1112222234
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
++.++.+||.+||+.||.+|||++++++||||....
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 239 FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 788999999999999999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=320.78 Aligned_cols=252 Identities=29% Similarity=0.506 Sum_probs=213.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~l 172 (544)
.|++.+.||.|+||.||+|.+..++..+|+|++..... .....+.+.+|+.+++.++ |+||+++++++.. ...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 38889999999999999999999999999998865432 3445677889999999997 9999999997753 457899
Q ss_pred EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-----HcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 173 VMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCH-----FMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH-----~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
+|||+++++|.+++.. ...+++..++.++.||+.||.||| +.+|+|+||||+||+++. ++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~---~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA---NNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec---CCCEEEeccc
Confidence 9999999999999876 356899999999999999999999 899999999999999954 4579999999
Q ss_pred CcccccCCCc-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 244 LSVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 244 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
++........ .....|++.|+|||++. ..++.++|+||||+++|+|++|..||...........+..+..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~ 232 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRI---PY 232 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCC---cc
Confidence 9987755432 34567899999999886 4578899999999999999999999988776666666655433211 22
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.++..+.+++.+||..+|.+||++.++++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 568899999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=325.85 Aligned_cols=259 Identities=26% Similarity=0.358 Sum_probs=214.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||++.+..++..||+|++.... .......+.+|+++++.++ ||||+++++++...+.+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEE
Confidence 45899999999999999999999999999999885432 2334577889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+++++|.+++...+.++...+..++.+++.||.|||+ .+++||||||+||++. .++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCcccchhhh-
Confidence 9999999999998888889999999999999999999997 6999999999999994 4457999999998754332
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-----------HHHHHHHhCCccCCCCcc
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-----------GIFDAILKGGVDFESEPW 320 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~ 320 (544)
......|+..|+|||++. +.++.++|||||||++|+|++|..||...... .....+..... +..+.
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 235 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--PRLPS 235 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--CCCCc
Confidence 123457899999999874 56889999999999999999999999765431 22223322211 11111
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
..++.++.+||.+||.+||.+|||+.++++|+||.+...+.
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~~ 276 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRAS 276 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccccc
Confidence 23678999999999999999999999999999997765443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=328.33 Aligned_cols=255 Identities=29% Similarity=0.450 Sum_probs=207.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~ 171 (544)
+.|++.+.||.|+||.||+|.+..++..+|+|.+...... ......+.+|+.+++++. ||||+++++++... +.+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 3589999999999999999999999999999998654322 223345678999999998 99999999998877 8999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+|+||||+|||++ .++.+||+|||++.....
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCceeeccC
Confidence 99999975 9998887644 489999999999999999999999999999999999994 445799999999887654
Q ss_pred C-CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc-------------
Q 009091 251 G-KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD------------- 314 (544)
Q Consensus 251 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~------------- 314 (544)
. .......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+......
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 22334567889999998753 3688999999999999999999999877665544443221100
Q ss_pred ------CC-------CCcccC--CCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 ------FE-------SEPWLL--ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 ------~~-------~~~~~~--~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.. ...... +++.+.++|.+||+.||++|||+.|+|.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00 000111 47889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=372.60 Aligned_cols=261 Identities=26% Similarity=0.440 Sum_probs=220.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.-+|.-+..||.|.||.||.|.+..+|...|+|.+...... ....+.+.+|..++..+. |||+|+++|+-...+.+
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhcc-CccccccCceeecHHHH
Confidence 3456688888999999999999999999999999988654332 444567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+|.||||+||+|.+.+...+..++...+.+..|++.|+.|||++|||||||||.||+| +.++.||++|||.|+.+.+
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecC
Confidence 9999999999999999888778888899999999999999999999999999999999 4455899999999998765
Q ss_pred CC-----ceecccCCccccCcccccc----cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 251 GK-----VYRDIVGSAYYVAPEVLRR----SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 251 ~~-----~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
.. .....+||+.|||||++.+ ....+.||||||||+.||+||+.||.....+-.+...+..+-..+.|.
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~-- 1464 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPE-- 1464 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCch--
Confidence 42 2245789999999999853 467899999999999999999999987665543333232222223332
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.++.+.++||.+||..||++|+++.|||+|.|-+...
T Consensus 1465 ~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1465 RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccc
Confidence 3899999999999999999999999999999987653
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=323.34 Aligned_cols=255 Identities=31% Similarity=0.560 Sum_probs=213.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|...+.||+|++|.||++.+..++..+++|++... .....+.+.+|+.+++.+. ||||+++++++...+..++++|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEEe
Confidence 55557899999999999999989999999987432 2334556889999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-ce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~ 254 (544)
|++|++|.+++.. +.++...+..++.|++.||.|||++||+||||+|+||+++ .++.++|+|||.+....... ..
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccchhhccCCccc
Confidence 9999999998877 6789999999999999999999999999999999999994 44579999999887654322 22
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
....|++.|+|||.+. ..++.++|+|||||++|+|++|..||...........+........ .....++..+.++|.+
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 251 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKL-KNLHKVSPRLRSFLDR 251 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCC-cccccCCHHHHHHHHH
Confidence 3456899999999886 4588999999999999999999999987766666655554422211 1122368899999999
Q ss_pred hcccCcCCCCChhhhhCCCccccCCC
Q 009091 334 MLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
||+.+|.+||++.++++||||++...
T Consensus 252 ~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 252 MLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HcccChhhCcCHHHHccCcccccCCC
Confidence 99999999999999999999988654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=336.46 Aligned_cols=267 Identities=30% Similarity=0.441 Sum_probs=213.5
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR---- 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~---- 167 (544)
+..+|.+.+.||+|+||+||+|.+..++..||||.+.... ........+.+|+.+++.+. |+||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcC-CCCccchHHheecccccc
Confidence 3457999999999999999999999999999999886432 22333456778999999997 99999999987643
Q ss_pred -CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 -QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
..+++|+||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+|||++ .++.+||+|||++.
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~ 156 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLAR 156 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcccc
Confidence 35899999995 68999988888899999999999999999999999999999999999994 44579999999998
Q ss_pred cccCC-CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC------------
Q 009091 247 FIDEG-KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------------ 311 (544)
Q Consensus 247 ~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~------------ 311 (544)
..... .......|+..|+|||++. ..++.++|||||||++|+|++|..||.+.........+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 76443 2233457889999999875 35889999999999999999999999765433222221110
Q ss_pred -----------CccCCC----CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 312 -----------GVDFES----EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 312 -----------~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
...... .....+++++.++|.+||+.||++|||++++|+||||.....+...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~ 304 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEP 304 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCc
Confidence 000000 01235788999999999999999999999999999998766555443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=327.79 Aligned_cols=255 Identities=29% Similarity=0.493 Sum_probs=209.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+.+|+++++++. |+||+++++++...+.+++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence 5899999999999999999999999999999885432 23344577899999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
||++++.+..+......+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeecccccCCCccc
Confidence 9999877766666666799999999999999999999999999999999999994 45679999999998765433
Q ss_pred ceecccCCccccCccccc-c-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc-----------------
Q 009091 253 VYRDIVGSAYYVAPEVLR-R-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV----------------- 313 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~----------------- 313 (544)
......++..|+|||++. . .++.++|+||||+++|+|++|..||.+......+..+.....
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence 334567889999999875 3 578999999999999999999999987655433322211000
Q ss_pred --cCCC---------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 314 --DFES---------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 314 --~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.++. .....++.++.+||.+||..+|.+||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 0011247889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=313.04 Aligned_cols=266 Identities=29% Similarity=0.429 Sum_probs=208.0
Q ss_pred ccccceecceecccCCeEEEEEEECCCCC----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGN----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED- 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 166 (544)
....|++...||+|.||.||+|..+.++. .+|+|.+..++... -.....-+|+.+++.|+ ||||+.+..++..
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELK-HPNVISLVKVFLSH 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhc-CCcchhHHHHHhcc
Confidence 34569999999999999999997654433 78999886543221 22245568999999998 9999999998876
Q ss_pred CCeEEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC-CCccEEEe
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ-----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKAT 240 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~-~~~~vkl~ 240 (544)
+..+++++||.+. +|...++-. +.++...++.|+.||+.|++|||++-|+||||||.|||+..++ ..+.|||+
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence 7899999999987 888888542 4589999999999999999999999999999999999996543 34789999
Q ss_pred ecCCcccccCCC----ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---------HHHH
Q 009091 241 DFGLSVFIDEGK----VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE---------KGIF 305 (544)
Q Consensus 241 Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~---------~~~~ 305 (544)
|||+++.+.+.- .....+-|.+|+|||++. ..|+.+.||||+||++.||+|-.+.|.+... -..+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 999999876532 223457799999999875 4699999999999999999999988865422 1233
Q ss_pred HHHHhCCccCCCCcc---------------------------------cCCCHHHHHHHHHhcccCcCCCCChhhhhCCC
Q 009091 306 DAILKGGVDFESEPW---------------------------------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352 (544)
Q Consensus 306 ~~i~~~~~~~~~~~~---------------------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 352 (544)
..|+.-........| ..-++...+|+.+||+.||.+|.|+++.|+|+
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 344331111111111 01245588999999999999999999999999
Q ss_pred ccccCCCC
Q 009091 353 WMREGGEA 360 (544)
Q Consensus 353 ~f~~~~~~ 360 (544)
||.+...+
T Consensus 339 yF~~d~lp 346 (438)
T KOG0666|consen 339 YFTEDPLP 346 (438)
T ss_pred ccccCCCC
Confidence 99998655
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=326.21 Aligned_cols=248 Identities=21% Similarity=0.325 Sum_probs=207.6
Q ss_pred cceecceecccCCeEEEEEEECCCC-----CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTG-----NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++.++. ||||+++++++...+.
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQP 82 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCCc
Confidence 4889999999999999999976554 679999875332 2344567889999999997 9999999999999899
Q ss_pred EEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 170 VHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
.+++|||+++++|.+++... ..++...+..++.|++.||.|||++||+||||||+||+++ .
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~---~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG---E 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---C
Confidence 99999999999999999764 4578889999999999999999999999999999999995 4
Q ss_pred CccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 009091 234 GAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i 308 (544)
++.++|+|||++....... ......+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....+....+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 4579999999997654322 122345688899999875 568999999999999999998 99999988877777766
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..+.... ....+++++.+|+.+||+.||.+||++.+++++
T Consensus 240 ~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 240 RSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6543322 123578999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=334.31 Aligned_cols=295 Identities=24% Similarity=0.390 Sum_probs=226.4
Q ss_pred CCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
.+.+.+.++|++.+.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++++. ||||+++++++..
T Consensus 8 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 85 (343)
T cd07880 8 KTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMK-HENVIGLLDVFTP 85 (343)
T ss_pred hhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCccceeeeecC
Confidence 345667788999999999999999999999999999999885432 22334456889999999997 9999999998875
Q ss_pred CC------eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 167 RQ------SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 167 ~~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.. .+++||||+ +++|.+++. ...+++..++.++.|++.||.|||+.||+||||||+||+++ .++.++|+
T Consensus 86 ~~~~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~ 160 (343)
T cd07880 86 DLSLDRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKIL 160 (343)
T ss_pred CccccccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEe
Confidence 43 468999999 778887765 45799999999999999999999999999999999999994 44579999
Q ss_pred ecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC---
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF--- 315 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~--- 315 (544)
|||++...... .....+++.|+|||++.+ .++.++|+|||||++|+|++|..||...........+.......
T Consensus 161 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 161 DFGLARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238 (343)
T ss_pred ecccccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 99999865432 234567899999998753 47889999999999999999999998766544443332211100
Q ss_pred --------------------CC----CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHH
Q 009091 316 --------------------ES----EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLS 371 (544)
Q Consensus 316 --------------------~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~ 371 (544)
.. ..+..+++.+.++|.+||..||.+|||+.++++||||+........+....+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~~ 318 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPYDD 318 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCCCccc
Confidence 00 011346788999999999999999999999999999987644433332223333
Q ss_pred HHH-HHHhhhHHHHHHHHHH
Q 009091 372 RMK-QFRAMNKLKKMALKVI 390 (544)
Q Consensus 372 ~l~-~~~~~~~l~~~~~~~~ 390 (544)
.+. ..+++.+++.+....+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~ 338 (343)
T cd07880 319 SFDEVDQSLEEWKRLTFTEI 338 (343)
T ss_pred cHHhhccchHHHHHHHHHHH
Confidence 332 2445556665555444
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=334.83 Aligned_cols=266 Identities=30% Similarity=0.459 Sum_probs=209.4
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR---- 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~---- 167 (544)
+.++|++.+.||+|+||.||+|.+..++..||+|++... ........+.+|+.+++++. |+||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 346799999999999999999999999999999988532 12334456788999999998 99999999876543
Q ss_pred -CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 -QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
...++|+||+.+ +|.+.+. ...+++..++.++.|++.||.|||+.||+||||||+|||+ +..+.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence 358999999965 8877764 4579999999999999999999999999999999999999 445579999999987
Q ss_pred cccCCC----ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC--------
Q 009091 247 FIDEGK----VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG-------- 312 (544)
Q Consensus 247 ~~~~~~----~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~-------- 312 (544)
...... ......|++.|+|||.+. ..++.++|||||||++|+|++|+.||.+.........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 654322 112357899999999864 358899999999999999999999997654433222221100
Q ss_pred --------------ccCC-CC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcc
Q 009091 313 --------------VDFE-SE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365 (544)
Q Consensus 313 --------------~~~~-~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~ 365 (544)
.... .. ....+++++.++|.+||+.||.+|||+.++++||||+....+.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~ 306 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPV 306 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCccc
Confidence 0000 00 01245788999999999999999999999999999988766554443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=321.09 Aligned_cols=251 Identities=25% Similarity=0.474 Sum_probs=207.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||.||+|++..++..||+|.+.............+.+|+.+++.+. ||||+++++++...+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEEE
Confidence 35899999999999999999999999999999886544334455567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 174 MELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||+++++|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+||+++. ++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~---~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC---CCCEEECccccceecc
Confidence 999999999988753 344899999999999999999999999999999999999944 4579999999988765
Q ss_pred CCCc-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGKV-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.... .....|++.|+|||.+. ..++.++|+||||+++|+|++|..||..... ......+.... .+..+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSE 235 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCH
Confidence 4322 22356889999999875 4588899999999999999999999976532 23333333322 22222235678
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.++|.+||..+|.+||++.++++
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHH
Confidence 9999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=336.16 Aligned_cols=258 Identities=28% Similarity=0.462 Sum_probs=207.2
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 167 (544)
.+.++|++.+.||+|+||.||+|.+..++..||+|.+.+.. ........+.+|+.+++++. |+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 90 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSL 90 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCc
Confidence 35677999999999999999999999999999999885432 22334456778999999997 99999999988643
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...|+||||+.+ +|.+.+... +++..+..++.|++.||+|||+.||+||||||+|||++ .++.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCcc
Confidence 357999999964 888877644 89999999999999999999999999999999999994 455799999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC------------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------------ 311 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~------------ 311 (544)
+.............|++.|+|||++. ..++.++|||||||++|+|++|+.||...........+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 98765544334557899999999875 56899999999999999999999999876544333332211
Q ss_pred ----------CccCCCC-----------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 312 ----------GVDFESE-----------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 312 ----------~~~~~~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
....... .....++.++++|.+||+.||++|||+.++|.||||+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 0000000 01124567899999999999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=327.54 Aligned_cols=254 Identities=28% Similarity=0.442 Sum_probs=211.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|+..+.||+|+||.||+|.+..++..||+|.+.... .....+.+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEEE
Confidence 45888899999999999999999899999999875432 2334567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||+++++|.+++.. +.+++..+..++.|++.||.|||++|++|+||+|+||++.. ++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~---~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE---QGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC---CCCEEEccccccccccCcch
Confidence 999999999988754 56899999999999999999999999999999999999954 45799999999976654322
Q ss_pred -eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 -YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 -~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....|+..|+|||.+. ..++.++|+|||||++|+|++|..||...........+...... .....++..+.++|
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li 233 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKEFV 233 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHHHH
Confidence 22346888999999886 45788999999999999999999999766554444433332211 11124678899999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccC
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+||..+|.+||++.++++||||...
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 234 EACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHccCCcccCcCHHHHHHhHHHHHH
Confidence 99999999999999999999999764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=324.68 Aligned_cols=254 Identities=28% Similarity=0.435 Sum_probs=202.1
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|++|.||+|.++.++..||+|.+..... ......+.+|+.+++.+. |+||+++++++...+..++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEE
Confidence 459999999999999999999998999999999865332 122234668999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+.+ +|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAKSVPS 157 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECccccccccCCCC
Confidence 999975 899888764 4689999999999999999999999999999999999994 4457999999998754322
Q ss_pred CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHhCCcc--------------
Q 009091 252 KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFDAILKGGVD-------------- 314 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~-~~~~~~~i~~~~~~-------------- 314 (544)
.......++..|+|||++. ..++.++||||||+++|+|++|..||.... .......+.+....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 1122335788999999875 347899999999999999999999997654 22222222110000
Q ss_pred -------CCC-----CcccCCC--HHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 -------FES-----EPWLLIS--DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 -------~~~-----~~~~~~~--~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
... .....++ ..+.++|.+||+.||.+|||+.++|.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000 0001233 788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=325.94 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=205.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||.|++|.||+|.+..++..||||++.... ........+.+|++++++++ ||||+++++++...+..++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccc-cccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEee
Confidence 788999999999999999999999999999885432 22333457889999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-C
Q 009091 176 LCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-K 252 (544)
Q Consensus 176 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~ 252 (544)
|+. ++|..++.. ...+++..++.++.|++.||+|||+.|++||||+|+||+++ .++.+||+|||++...... .
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeeccchhhcccCcc
Confidence 996 588888865 34689999999999999999999999999999999999994 4457999999998765432 1
Q ss_pred ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc----------------
Q 009091 253 VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD---------------- 314 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~---------------- 314 (544)
......+++.|+|||++.+ .++.++|||||||++|+|+||+.||...........+......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 2233457889999998753 3688999999999999999999999876654433332221000
Q ss_pred --CCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 --FES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 --~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
++. .....++++++++|.+||+.||.+|||++++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 0012467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=322.42 Aligned_cols=249 Identities=35% Similarity=0.618 Sum_probs=213.9
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||.|+||.||+|.+..++..+++|++...........+.+.+|+.+++++. ||||+++++.+......|++|||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999999999999986554333455677889999999997 9999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC---------
Q 009091 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--------- 252 (544)
Q Consensus 182 L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~--------- 252 (544)
|.+++...+.+++..+..++.||+.||.|||+.|++|+||+|+||+++. +..++|+|||++.......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS---NGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC---CCCEEEEecccchhcccCcccccccccc
Confidence 9999988788999999999999999999999999999999999999954 4579999999987653321
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
......++..|+|||.+. ..++.++|+||||+++|+|++|..||...........+..+...++. ...++..+.++|
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i 234 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE--DVEVSDEAIDLI 234 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc--cccCCHHHHHHH
Confidence 223356888999999875 45888999999999999999999999888877777777665443322 223589999999
Q ss_pred HHhcccCcCCCCCh---hhhhCCCcccc
Q 009091 332 RKMLIQDPKKRITS---AEVLEHPWMRE 356 (544)
Q Consensus 332 ~~~l~~dp~~Rps~---~ell~hp~f~~ 356 (544)
.+||+.+|.+|||+ .++|+||||++
T Consensus 235 ~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 99999999999999 99999999975
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=304.89 Aligned_cols=251 Identities=25% Similarity=0.371 Sum_probs=205.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----- 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----- 166 (544)
-..+|++.+.||+|||+-||++....++..||+|++... ..++.+...+|++..+++. ||||++++++...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDG 94 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccC
Confidence 357899999999999999999999999999999999654 3566788899999999997 9999998887643
Q ss_pred CCeEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCCccEEEe
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
....||++.|...|+|.+.+... ..+++..+..|+.+|++||.+||+.. ++||||||.|||++. .+.++|.
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~---~~~~vl~ 171 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD---SGLPVLM 171 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC---CCceEEE
Confidence 34599999999999999988652 35899999999999999999999998 999999999999965 4579999
Q ss_pred ecCCcccccCCCce----------ecccCCccccCcccccc----cCCCcchHHHHHHHHHHHhhCCCCCCCCChHH--H
Q 009091 241 DFGLSVFIDEGKVY----------RDIVGSAYYVAPEVLRR----SYGKEIDVWSAGVILYILLSGVPPFWAETEKG--I 304 (544)
Q Consensus 241 Dfg~a~~~~~~~~~----------~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~--~ 304 (544)
|||.+....-.-.. ..-..|..|+|||++.- ..+.++|||||||+||.|+.|.-||...-..+ +
T Consensus 172 D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 172 DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 99998765321110 11357899999999852 36899999999999999999999995432211 1
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.-++..+.+.++... .+|+.+.++|+.||+.||.+||++.+++.+
T Consensus 252 aLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 252 ALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 122334455555443 489999999999999999999999999864
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=325.43 Aligned_cols=256 Identities=32% Similarity=0.576 Sum_probs=211.5
Q ss_pred ceecceecccCCeEEEEEEEC---CCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 96 YTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
|++.+.||.|+||.||+|.+. .+|..||+|++...... .....+.+.+|+.+++++.+|+||+.+++++..+..++
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 788999999999999999874 47899999998654322 12334677889999999987999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+|||++ .++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccceecccc
Confidence 9999999999999999888899999999999999999999999999999999999994 4457999999999865432
Q ss_pred C--ceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHhCCccCCCCcccC
Q 009091 252 K--VYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 252 ~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~ 322 (544)
. ......|+..|+|||.+.. .++.++||||||+++|+|++|..||..... ......+......+ ...
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 234 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----PQE 234 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC----Ccc
Confidence 2 2224568999999998753 467899999999999999999999964332 23333333332222 234
Q ss_pred CCHHHHHHHHHhcccCcCCCC-----ChhhhhCCCccccCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMREGG 358 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~ 358 (544)
+++.+.+++.+||+.||.+|| ++++++.||||.+..
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 788999999999999999997 889999999998753
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=322.48 Aligned_cols=256 Identities=27% Similarity=0.449 Sum_probs=212.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|...+.||+|+||+||+|.+..++..|++|++.............+.+|+.+++.++ |||++++++++.+....|+
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEE
Confidence 445777888999999999999999999999999986544333444567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+. ++|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||+|+||++. .++.+||+|||++.....
T Consensus 99 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 99 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSP- 173 (313)
T ss_pred EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCcccCC-
Confidence 999996 477777765 45689999999999999999999999999999999999994 445799999999864332
Q ss_pred CceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.....|+..|+|||++. +.++.++|||||||++|+|++|..||...........+...... ......++..+
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 249 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLQSNEWTDSF 249 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC--CCCccccCHHH
Confidence 23457899999999873 45888999999999999999999999877665555544433221 11223467889
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
++||.+||+.+|.+||++.+++.||||....
T Consensus 250 ~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 250 RGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9999999999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=321.33 Aligned_cols=254 Identities=26% Similarity=0.439 Sum_probs=212.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+-|++.+.||.|+||.||+|.+..++..+|+|.+.... .......+.+|+.++.++. ||||+++++++..++.+++|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEE
Confidence 44888899999999999999999899999999875432 2234567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||+++++|.+++.. ..++...+..++.|++.|+.|||+.|++|+||+|+||+++ .++.++|+|||++........
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccceecccchh
Confidence 999999999988764 5689999999999999999999999999999999999994 445799999999876644321
Q ss_pred -eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 -YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 -~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....|+..|+|||.+. ..++.++|+|||||++|+|++|..||...........+...... .....++.++.++|
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i 233 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEFV 233 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHHH
Confidence 22356888999999875 45788999999999999999999999876655555544333221 11124688999999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccC
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+||..+|.+||++.++++||||.+.
T Consensus 234 ~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 234 EACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHccCChhhCcCHHHHHhCHHHhhh
Confidence 99999999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=355.67 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=203.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.++||+|+||.||+|.+..+++.||+|++...........+++.+|+.+++++. ||||+++++++...+..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEE
Confidence 46999999999999999999999999999999986543333444567899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 174 MELCSGGELFDKIIAQ-----------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-----------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
|||++|++|.+++... ..++...+..++.||+.||.|||+.||+||||||+|||++ ..+.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCCEEEEec
Confidence 9999999999988642 2245667889999999999999999999999999999994 4457999999
Q ss_pred CCcccccCC-------------------CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH
Q 009091 243 GLSVFIDEG-------------------KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302 (544)
Q Consensus 243 g~a~~~~~~-------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~ 302 (544)
|++...... ......+||+.|+|||++. ..++.++|||||||++|||++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 999865210 0011247999999999876 46899999999999999999999999775544
Q ss_pred HHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 303 GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 303 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
......... .+....+...+++.+.+++.+||..||++|++..+.+.+
T Consensus 238 ki~~~~~i~-~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 238 KISYRDVIL-SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhhhhcc-ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 332221111 111112334678999999999999999999887665543
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=319.28 Aligned_cols=255 Identities=29% Similarity=0.470 Sum_probs=215.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||.|++|.||+|.+..++..|++|++..... ......+.+|+..+.++. |+||+++++++...+.+++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 47889999999999999999999999999998855432 144677899999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++++|.+++.....+++..+..++.|++.||.|||+ .|++||||+|+||+++ .++.++|+|||++........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCccceecccCCC
Confidence 999999999999888889999999999999999999999 9999999999999994 455799999999987654332
Q ss_pred e-ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 254 Y-RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET---EKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 254 ~-~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
. ....++..|+|||.+. ..++.++|+||||+++|+|++|..||.... .......+...... .. +...++..+.
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~ 233 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP-SL-PAEEFSPEFR 233 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC-CC-CcccCCHHHH
Confidence 2 2457889999999875 457889999999999999999999997763 33444444433221 11 1112788999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++|.+||..+|++||++.++++||||+..
T Consensus 234 ~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 234 DFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 99999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=336.55 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=202.9
Q ss_pred cccccceecceecccCCeEEEEEEECCC-----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENST-----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.-.+.|++++.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.+++++..||||+++++++.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3456799999999999999999987433 3469999885432 23445678999999999966999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHc--------------------------------------------------------
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQ-------------------------------------------------------- 189 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~-------------------------------------------------------- 189 (544)
..+.+|||||||++|+|.+++...
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 999999999999999999888642
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 190 ----------------------------------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 190 ----------------------------------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
..+++..+..++.|++.||.|||+.+|+||||||+|||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~ 271 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence 1367778889999999999999999999999999999995
Q ss_pred cCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
. +..+||+|||++........ .....+++.|+|||++. ..++.++|||||||++|+|++ |..||........
T Consensus 272 ~---~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 272 Q---GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred C---CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 4 45799999999986543221 12335678899999875 568999999999999999997 9999977654433
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
............. ...++..+.++|.+||+.||++||++.++.+
T Consensus 349 ~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 349 FYNKIKSGYRMAK--PDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHhcCCCCCC--CccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 3333333333222 2357889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=311.45 Aligned_cols=262 Identities=23% Similarity=0.296 Sum_probs=216.8
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
.+-+..||.|+||+|++..++.+|+..|||+|.... ...+..++..|.+...+-.++||||+++|++..++..||.||
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 344567999999999999999999999999996554 345667889999988888889999999999999999999999
Q ss_pred ccCCCChHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 176 LCSGGELFDKII-----AQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 176 ~~~~~~L~~~l~-----~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+|. .+|..+.+ ....+++..+..|....+.||+||-. ..||||||||+|||+ +..+.|||||||++..+.
T Consensus 144 LMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHH
Confidence 995 46644332 35679999999999999999999975 589999999999999 666789999999998876
Q ss_pred CCCceecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHhCCccCCCCcc--cCC
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPW--LLI 323 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~--~~~ 323 (544)
+.-..+.-+|...|||||.+. ..|+-++|+||||++|||+.||..||.+-.. -+.+..+..+.++...... ..+
T Consensus 220 ~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~ 299 (361)
T KOG1006|consen 220 DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHY 299 (361)
T ss_pred HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccccccc
Confidence 654445568999999999884 3499999999999999999999999976543 3445555666554433322 247
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 363 (544)
+..+..+|..||.+|-+.||...+|+++||++.+......
T Consensus 300 s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~~ 339 (361)
T KOG1006|consen 300 SFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGPD 339 (361)
T ss_pred CHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCCc
Confidence 8899999999999999999999999999999877554443
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=318.72 Aligned_cols=250 Identities=27% Similarity=0.444 Sum_probs=202.0
Q ss_pred ecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 98 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
....||+|+||.||+|.+..++..||+|.+... .....+.+.+|+.++++++ |+||+++++++..++..++|+||+
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecC
Confidence 345799999999999999999999999987543 2344567889999999997 999999999999999999999999
Q ss_pred CCCChHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-c
Q 009091 178 SGGELFDKIIAQ-GHY--TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-V 253 (544)
Q Consensus 178 ~~~~L~~~l~~~-~~~--~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~ 253 (544)
++++|.+++... ..+ ++..+..++.||+.||.|||+.||+||||||+||+++.. ...++|+|||++....... .
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY--SGVVKISDFGTSKRLAGINPC 165 (268)
T ss_pred CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCeEEEecchhheecccCCCc
Confidence 999999998764 445 788899999999999999999999999999999999542 2479999999987654322 2
Q ss_pred eecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
.....|++.|+|||.+.. .++.++|+||||+++|+|++|..||............. ............+++++.++
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 244 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-GMFKIHPEIPESLSAEAKNF 244 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-hhhccCCCCCcccCHHHHHH
Confidence 233468899999998753 37889999999999999999999997643322111100 00011111123578899999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+.+||+.+|.+|||+.+++.||||
T Consensus 245 i~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 245 ILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=321.64 Aligned_cols=252 Identities=26% Similarity=0.377 Sum_probs=208.4
Q ss_pred ccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.|.+.+.||+|++|.||+|.+.. ++..||+|.+... ........+.+|+.+++++. |+||+++++++...+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFN-HQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCC
Confidence 458999999999999999999876 6788999977432 22334466889999999997 999999999999989
Q ss_pred eEEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 169 SVHLVMELCSGGELFDKIIAQG-------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
..++||||++|++|.+++...+ .+++..+..++.||+.||.|||+++++||||||+|||++..+....+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999997653 478899999999999999999999999999999999997655556799999
Q ss_pred cCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCC
Q 009091 242 FGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 242 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
||++......... ....++..|+|||++. ..++.++|||||||++|+|++ |..||...........+..... ..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~~ 241 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR-LD 241 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-CC
Confidence 9999876432211 1223356799999875 568999999999999999997 9999988777776665554322 11
Q ss_pred CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 317 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
....++..+.+++.+||+.||.+||++.++++|
T Consensus 242 --~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 242 --PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 123578999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=335.37 Aligned_cols=250 Identities=25% Similarity=0.387 Sum_probs=212.6
Q ss_pred cceecceecccCCeEEEEEEECCCCC---e-EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGN---S-YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~---~-~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.-.+.++||+|+||.||+|..+..+. . ||+|..............++.+|+++|+.+. |||||+++|+......+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEPL 236 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCcc
Confidence 34567899999999999999765432 3 8999876434345667788999999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+||||+|.||+|.++|...+. ++..+...++.+.+.||+|||+++++||||-.+|+|++. ...+||+|||+++...
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~---~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK---KGVVKISDFGLSRAGS 313 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC---CCeEEeCccccccCCc
Confidence 999999999999999999774 999999999999999999999999999999999999954 3468999999988664
Q ss_pred CCCcee-cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 250 EGKVYR-DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 250 ~~~~~~-~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
...... ..--...|+|||.+. +.|+.++|||||||++||+++ |..||.+.........|..+.+..+.+. ..+.+
T Consensus 314 ~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~--~~p~~ 391 (474)
T KOG0194|consen 314 QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS--KTPKE 391 (474)
T ss_pred ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC--CCHHH
Confidence 221111 112356899999986 569999999999999999999 8899999999999999977766666554 56889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..++.+||..||++||++.++.+
T Consensus 392 ~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 392 LAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHhccCChhhccCHHHHHH
Confidence 999999999999999999998753
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=327.50 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=201.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCe--EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNS--YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.|++.+.||+|+||.||+|.+..++.. +|+|.+.. .........+.+|+.++.++.+|+||+++++++...+.+++
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 488999999999999999998877765 46665532 22334456788999999999669999999999999999999
Q ss_pred EEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCcc
Q 009091 173 VMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~ 236 (544)
||||+++++|.+++...+ .+++..++.++.|++.||+|||++||+||||||+|||++ .+..
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CCCc
Confidence 999999999999997543 478899999999999999999999999999999999994 4457
Q ss_pred EEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCcc
Q 009091 237 LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVD 314 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~ 314 (544)
+||+|||++.............++..|+|||.+. ..++.++|||||||++|+|+| |..||......+....+... ..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~ 241 (303)
T cd05088 163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YR 241 (303)
T ss_pred EEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC-Cc
Confidence 9999999986432211111223466799999875 457899999999999999998 99999877766666554332 11
Q ss_pred CCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
. .....+++.+.+||.+||+.+|.+||+++++|.+
T Consensus 242 ~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 242 L--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred C--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 1223468899999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=326.87 Aligned_cols=258 Identities=29% Similarity=0.549 Sum_probs=214.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|.....||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.+++.+. ||||+++++.+..++..++|
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEE
Confidence 34666678999999999999999899999999885432 234567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||+++++|..++.. ..+++..++.++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++.......
T Consensus 97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhHhhcccccc
Confidence 999999999887654 5689999999999999999999999999999999999994 44579999999987654322
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
......|+..|+|||++. ..++.++|||||||++|+|++|..||...........+...... .......++..+.++|
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i 251 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVLRDFL 251 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHHHHHH
Confidence 223457899999999886 46889999999999999999999999877665555554433221 1222335688999999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
.+||+.+|.+||++.++++||||.+...+
T Consensus 252 ~~~l~~~P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 252 ERMLTREPQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred HHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence 99999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=324.97 Aligned_cols=253 Identities=34% Similarity=0.606 Sum_probs=218.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+.+.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++++.+|+||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 48899999999999999999999999999999876544344455778899999999977999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc-
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV- 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~- 253 (544)
||+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++........
T Consensus 82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccccccCCcccc
Confidence 9999999999999888899999999999999999999999999999999999994 445799999999886543221
Q ss_pred --------------------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC
Q 009091 254 --------------------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG 312 (544)
Q Consensus 254 --------------------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~ 312 (544)
.....|+..|+|||++. ..++.++|+||||++++++++|..||........+..+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 238 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC
Confidence 12346788999999875 457889999999999999999999998877666666665443
Q ss_pred ccCCCCcccCCCHHHHHHHHHhcccCcCCCCCh----hhhhCCCcc
Q 009091 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITS----AEVLEHPWM 354 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~hp~f 354 (544)
..++ ..+++.+.++|.+||+.||.+||++ +++++||||
T Consensus 239 ~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 239 YSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 3333 2468899999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=324.08 Aligned_cols=260 Identities=26% Similarity=0.422 Sum_probs=209.1
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||.|++|+||+|.+..+++.||+|.+..... .......+.+|+++++++. ||||+++++++.....+++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEE
Confidence 358999999999999999999999999999998854322 2233456788999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||++ ++|.+.+..... +++..++.++.||+.||.|||++||+||||+|+||+++..+ ..+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~--~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC--CEEEEcccccccccCCC
Confidence 99996 488887765443 57888999999999999999999999999999999996433 46999999999765332
Q ss_pred -CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC-------------
Q 009091 252 -KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF------------- 315 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~------------- 315 (544)
.......|++.|+|||++.+ .++.++|||||||++|+|++|..||......+.+..+.......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 22234467889999998753 47889999999999999999999998776655444432210000
Q ss_pred --------CCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 316 --------ESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 316 --------~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
... ....+++++.++|.+||+.||.+||++.++++||||....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 000 0124678899999999999999999999999999998754
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=316.56 Aligned_cols=248 Identities=29% Similarity=0.487 Sum_probs=210.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||.|+||.||++.+..++..+|+|.+.... .....+.+.+|+.+++.+. |+||+++++.+...+.+++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 3888999999999999999999999999999885432 2334567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcEEEcccCcceeecccc
Confidence 999999999988653 3589999999999999999999999999999999999994 44579999999987664322
Q ss_pred -ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......|++.|+|||++. ..++.++|+||||+++|+|++|..||...........+..+..... ...++..+.++
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 231 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL---PSHYSYELRSL 231 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC---CcccCHHHHHH
Confidence 223467899999999886 4588999999999999999999999988777666666655543321 12468899999
Q ss_pred HHHhcccCcCCCCChhhhhCC
Q 009091 331 VRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~h 351 (544)
|.+||+.||.+||++.+++.-
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=326.90 Aligned_cols=256 Identities=27% Similarity=0.416 Sum_probs=201.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ---- 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 168 (544)
-++|++.+.||+|+||.||+|.+..++..||+|.+..... .......+.+|+.+++++. ||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCC-CCCccceEEEEeccccccc
Confidence 3459999999999999999999999999999998854332 2222345668999999997 999999999886543
Q ss_pred ----eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 169 ----SVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 169 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
..++||||+.+ +|.+.+.... .+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg 164 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFG 164 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCcEEECcCC
Confidence 46999999964 8888776643 689999999999999999999999999999999999994 44579999999
Q ss_pred CcccccCCC-----ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC-
Q 009091 244 LSVFIDEGK-----VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF- 315 (544)
Q Consensus 244 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~- 315 (544)
++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|..||...........+..-....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 997654321 1123467889999998754 36889999999999999999999998766544333222211000
Q ss_pred ------------------CCCc---------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 316 ------------------ESEP---------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 316 ------------------~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+... ....++.+.+||.+||..||.+|||++++|+||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 0000 01135678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=322.98 Aligned_cols=254 Identities=26% Similarity=0.408 Sum_probs=200.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+. |+||+++++++..++..|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999854321 222345678999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+. ++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccccccCCCC
Confidence 99996 577776654 35678889999999999999999999999999999999994 4457999999998764332
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCC--------------cc
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--------------VD 314 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~--------------~~ 314 (544)
.......+++.|+|||++.+ .++.++|||||||++|+|++|..||...... +.+..+.... ..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 12233467899999998853 4788999999999999999999999765432 2222211100 00
Q ss_pred C-----CC--C-----cc--cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 F-----ES--E-----PW--LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 ~-----~~--~-----~~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. .. + .+ ...+..+.+++.+||..||.+|||+.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0 00 0 00 1135688999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=282.53 Aligned_cols=257 Identities=26% Similarity=0.460 Sum_probs=213.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.-.++||+|.||+||+|++..++..||+|++..... .+.......+|+-+++.|. |.|||+++++...+..+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 46677899999999999999999999999999865432 2333466789999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||. .+|..+... ++.+..+.++.++.|+++||.+||++++.|||+||.|.|| +.++.+||+|||+++.+.-+-
T Consensus 81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCceE
Confidence 9995 488888766 5679999999999999999999999999999999999999 555689999999999776432
Q ss_pred ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCccc--------
Q 009091 253 VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL-------- 321 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-------- 321 (544)
..+..+-|.+|++|.++-+ -|+.+.|+||-||++.|+.. |++.|.+....+.+..|.+.......+.|+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 4455678999999999854 49999999999999999998 566677777777777776532222222221
Q ss_pred -----------------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 322 -----------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 322 -----------------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.++..-++++.++|.-+|.+|.++++.|+||||...
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 234457899999999999999999999999999764
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=321.73 Aligned_cols=256 Identities=27% Similarity=0.436 Sum_probs=213.6
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
....|...+.||+|+||.||++.+..++..+|+|++.............+.+|+++++++. |||++++++++......+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEE
Confidence 3445888999999999999999999999999999886543333444567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+.| +|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||++. .++.+||+|||++.....
T Consensus 102 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 102 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASIASP 177 (317)
T ss_pred EEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCccccCC
Confidence 99999975 77777654 45689999999999999999999999999999999999994 445799999999875443
Q ss_pred CCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
. ....|++.|+|||.+. +.++.++|+|||||++|+|++|..||...........+....... .....+++.
T Consensus 178 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 252 (317)
T cd06635 178 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--LQSNEWSDY 252 (317)
T ss_pred c---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--CCCccccHH
Confidence 2 2457889999999863 458889999999999999999999998876666555555543322 122346889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++++|.+||+.+|.+||++.++++|+|+...
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 9999999999999999999999999999654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=322.40 Aligned_cols=253 Identities=26% Similarity=0.454 Sum_probs=206.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||.|++|.||+|.+..++..||+|++.... .......+.+|+.+++++. |+||+++++++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDA--EEGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccc--cccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEE
Confidence 3888999999999999999999999999999886532 1223456778999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 175 ELCSGGELFDKIIAQ---GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 175 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||+++ +|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecchhhhhcCC
Confidence 99985 888887654 3589999999999999999999999999999999999994 4457999999999765432
Q ss_pred -CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC-------------
Q 009091 252 -KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF------------- 315 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~------------- 315 (544)
.......++..|++||++.+ .++.++|||||||++|+|++|..||.+....+....+.......
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 12233467889999998753 46889999999999999999999998776655544433211000
Q ss_pred -CC--C---------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 316 -ES--E---------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 316 -~~--~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.. + ....++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00 0 011357889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=317.63 Aligned_cols=253 Identities=27% Similarity=0.507 Sum_probs=213.3
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||+|+||.||+|.++.++..+|+|.+..... .....+.+.+|+.+++.++ |+||+++++.+...+..++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEE
Confidence 48889999999999999999999999999998865432 2234567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+|+|+||||+||+++.++ ..+||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG--MVAKLGDFGIARQLNDSM 156 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC--CeEEecccccchhccCCc
Confidence 9999999999987643 478999999999999999999999999999999999995432 357999999987765432
Q ss_pred -ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......|++.|+|||++. ..++.++|+||||+++|+|++|..||...........+..+..... ...++..+.++
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 233 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPI---SPNFSRDLRSL 233 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCC---CCCCCHHHHHH
Confidence 223346899999999875 4588999999999999999999999987766665555554433211 12468899999
Q ss_pred HHHhcccCcCCCCChhhhhCCCcc
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f 354 (544)
|.+||..+|++|||+.++++||||
T Consensus 234 i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 234 ISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhccChhhCcCHHHHhhCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=332.25 Aligned_cols=266 Identities=27% Similarity=0.424 Sum_probs=210.6
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR---- 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~---- 167 (544)
+..+|.+.+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++ ||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcC-CCcchhhHhhhccccccc
Confidence 3467999999999999999999999999999999885433 244567889999999997 99999998776543
Q ss_pred ----------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 168 ----------QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 168 ----------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
...++||||++ ++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+||+++..+ ..+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~--~~~ 154 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED--LVL 154 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC--ceE
Confidence 35789999997 488887753 5689999999999999999999999999999999999996433 468
Q ss_pred EEeecCCcccccCCCc----eecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC
Q 009091 238 KATDFGLSVFIDEGKV----YRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~ 311 (544)
||+|||++........ .....|+..|+|||++. ..++.++|||||||++|+|++|..||.+.........+...
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999876543211 12236788999999764 35788999999999999999999999877655444433221
Q ss_pred Cc----------------------cCCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcc
Q 009091 312 GV----------------------DFESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365 (544)
Q Consensus 312 ~~----------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~ 365 (544)
.. ..... ....++.++.+||.+||+.||.+|||+.++|.||||+....+.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~ 314 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPV 314 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccccC
Confidence 10 00000 01246788999999999999999999999999999987655544443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=322.02 Aligned_cols=248 Identities=23% Similarity=0.391 Sum_probs=208.0
Q ss_pred ccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+.+|+++++++. |+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQ-HENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcC-CCCchheeeEEecCC
Confidence 458899999999999999998743 46789999885432 2334578899999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQG--------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~ 234 (544)
..++||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+|||++ .+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---YD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---CC
Confidence 9999999999999999997642 378889999999999999999999999999999999994 44
Q ss_pred ccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHH
Q 009091 235 AMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAIL 309 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~ 309 (544)
+.+||+|||++........ .....+++.|+|||++. +.++.++|||||||++|+|++ |..||...........+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 6899999999976533221 12335678899999875 568999999999999999998 999998888877777777
Q ss_pred hCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+...... ..++..+.++|.+||+.||.+||++.|+++
T Consensus 239 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 239 QGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 65443222 357899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=324.22 Aligned_cols=260 Identities=30% Similarity=0.499 Sum_probs=214.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|.+.+.||+|+||.||++.+..++..||+|.+... .....+.+.+|+.+++++. ||||+++++.+...+..++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 35699999999999999999999889999999987432 2233567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|+||+++++|.+++.. ..++...+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~---~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC---CCCEEEccCcceecccccc
Confidence 9999999999998865 35889999999999999999999999999999999999944 4579999999887654332
Q ss_pred -ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......|++.|+|||.+. +.++.++|+|||||++|+|++|..||...........+..... ........++..++++
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 248 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRDF 248 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCCCCccccCHHHHHH
Confidence 223356889999999875 5588999999999999999999999987655443333322211 1122233467889999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
|.+||..+|.+||++.+++.||||+......
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~ 279 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQHPFLKIAKPLS 279 (293)
T ss_pred HHHHccCChhhCcCHHHHhcCHHHhcCcccc
Confidence 9999999999999999999999998765433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=333.29 Aligned_cols=266 Identities=27% Similarity=0.416 Sum_probs=213.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~ 168 (544)
.++|.+.+.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++++. ||||+++++++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-DVPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-ccccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCc
Confidence 467999999999999999999999999999999886432 22334567788999999997 9999999988753 35
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+++||||+. ++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++...
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEecccccceee
Confidence 7899999995 58999988778899999999999999999999999999999999999994 4567999999998765
Q ss_pred cCCC-----ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC----------
Q 009091 249 DEGK-----VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG---------- 311 (544)
Q Consensus 249 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~---------- 311 (544)
.... ......|+..|+|||.+.+ .++.++|||||||++|+|++|+.||.+......+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 4321 1124578999999998753 4889999999999999999999999776543322221110
Q ss_pred -------------CccCCCCc----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 312 -------------GVDFESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 312 -------------~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
.......+ ...+++++.++|.+||+.||.+||++.+++.||||.....+...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~ 307 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEP 307 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcccc
Confidence 00000000 124688999999999999999999999999999998776655443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=319.99 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=204.9
Q ss_pred ccccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+. ||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 3467999999999999999999864 235679999874322 2234556889999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCcc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG----------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~ 236 (544)
.+..++||||+++++|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||++ .++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCC
Confidence 999999999999999999987532 246778899999999999999999999999999999995 4567
Q ss_pred EEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhC
Q 009091 237 LKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~ 311 (544)
++|+|||++......... ....+++.|+|||++. +.++.++|||||||++|||++ |..||.+.........+...
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG 237 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998765433221 1234577899999876 568999999999999999999 78999887777767666554
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..... ...+++.+.++|.+||+.||.+|||+.+++++
T Consensus 238 ~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 238 GLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43221 23568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=322.25 Aligned_cols=253 Identities=27% Similarity=0.438 Sum_probs=206.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||.|++|.||+|.+..+|..||+|++..... .......+.+|+.+++++. ||||+++++++...+..+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 5678899999999999999999999999998865432 2233456788999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-C
Q 009091 176 LCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-K 252 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~ 252 (544)
|++ ++|.+++.... .+++..+..++.|++.||.|||+++++||||+|+||+++. ++.++|+|||++...... .
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCcEEEeecccccccCCCcc
Confidence 995 68999887765 6899999999999999999999999999999999999954 457999999999765422 1
Q ss_pred ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc-----------------
Q 009091 253 VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV----------------- 313 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~----------------- 313 (544)
......++..|+|||++.+ .++.++||||||+++|+|++|..||........+..+.+...
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2233467889999998753 468899999999999999999999987665443333322100
Q ss_pred --------cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 314 --------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 314 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.........++..+.++|.+||+.||.+|||+++++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00011123467899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=328.62 Aligned_cols=264 Identities=27% Similarity=0.394 Sum_probs=211.3
Q ss_pred ccccce-ecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChh-----------cHHHHHHHHHHHHhccCCCCeeE
Q 009091 92 IRQFYT-LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ-----------DREDIKREIQIMQHLSGQQNIVE 159 (544)
Q Consensus 92 ~~~~y~-~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~h~~iv~ 159 (544)
+.++|. +.+.||.|+||+||+|.+..++..||+|++......... ....+.+|+.+++.+. |+||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Ccceee
Confidence 345565 567899999999999999999999999988654322100 1124678999999997 999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 160 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
+++++...+..++||||+. ++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||++. ..+.++|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~~kl 160 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGICKI 160 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCCEEE
Confidence 9999999999999999996 59999998888899999999999999999999999999999999999994 4457999
Q ss_pred eecCCcccccCC---------------CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChH
Q 009091 240 TDFGLSVFIDEG---------------KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEK 302 (544)
Q Consensus 240 ~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~ 302 (544)
+|||++...... .......+++.|+|||.+.+ .++.++|+|||||++|+|++|..||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999998765411 11122356888999998854 3688999999999999999999999887766
Q ss_pred HHHHHHHhCCccCCCC------------------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 303 GIFDAILKGGVDFESE------------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 303 ~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.+..+.......... .....+..+.++|.+||+.+|.+|||++++|.||||+...
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6555443311100000 0123478899999999999999999999999999998765
Q ss_pred CC
Q 009091 359 EA 360 (544)
Q Consensus 359 ~~ 360 (544)
..
T Consensus 321 ~~ 322 (335)
T PTZ00024 321 LP 322 (335)
T ss_pred CC
Confidence 43
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=354.53 Aligned_cols=248 Identities=26% Similarity=0.425 Sum_probs=213.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCC-----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN-----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
....+.+.||+|+||.||.|....-.. .||+|.+.+ ..+.+....|.+|..+|+++. |||||+++|++.+.+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--~~~~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--LSSEQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDSG 768 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--cCCHHHHHHHHHHHHHHhcCC-CcceeeEEEeecCCC
Confidence 346778899999999999998764433 388887754 345777889999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
..+|++|||+||+|..+|++. ..++......++.+|+.|+.||+++++|||||..+|+|| +....|||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEcc
Confidence 999999999999999999875 348899999999999999999999999999999999999 4557899999
Q ss_pred cCCcccccCCCceecc---cCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCC
Q 009091 242 FGLSVFIDEGKVYRDI---VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~---~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
||+|+.+.....++.. .-...|||||.+. +.++.++|||||||+|||++| |..||.+....+++..++.+. +++
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~ 924 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLD 924 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccC
Confidence 9999976554443321 2235899999986 779999999999999999999 889999998888888777776 444
Q ss_pred CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 317 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+ ..+++.+.++|..||+.+|++||++..|++
T Consensus 925 ~P--~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 925 PP--SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CC--CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 43 478999999999999999999999999987
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=328.00 Aligned_cols=258 Identities=30% Similarity=0.458 Sum_probs=202.6
Q ss_pred cceecceecccCCeEEEEEEECC--CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENS--TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~ 170 (544)
+|.+.+.||+|+||.||+|.+.. ++..||+|.+...........+.+.+|+.+++.+. ||||+++++++... ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 48889999999999999999988 89999999987643222334466788999999997 99999999999887 889
Q ss_pred EEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC-CCCccEEEeecCC
Q 009091 171 HLVMELCSGGELFDKIIAQ-----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK-DGGAMLKATDFGL 244 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~-~~~~~vkl~Dfg~ 244 (544)
++||||+++ +|.+.+... ..+++..++.++.|++.||.|||+.+|+||||||+|||++.+ +..+.+||+|||+
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999975 777766432 258999999999999999999999999999999999999541 1257899999999
Q ss_pred cccccCCCc----eecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHH---------HHHHHH
Q 009091 245 SVFIDEGKV----YRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKG---------IFDAIL 309 (544)
Q Consensus 245 a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~---------~~~~i~ 309 (544)
+........ .....++..|+|||++.+ .++.++|||||||++|+|++|..||....... .+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 886543221 223568899999998753 47899999999999999999999997543321 111110
Q ss_pred h------------------------CC--ccCCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 310 K------------------------GG--VDFES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 310 ~------------------------~~--~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. .. ..+.. ..+...+..+.++|.+||+.||++|||+.++++||||
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 0 00 00000 0001456789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=319.67 Aligned_cols=256 Identities=29% Similarity=0.487 Sum_probs=206.3
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~l 172 (544)
.|...+.||.|++|.||+|.+..++..+|+|.+.... .......+.+|+++++++. ||||+++++++.. .+.+++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEEE
Confidence 4788899999999999999999999999999886432 2244567899999999997 9999999998864 447899
Q ss_pred EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 173 VMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||++.. +..++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR---KGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec---CCeEEEeeccccccc
Confidence 9999999999887653 345899999999999999999999999999999999999954 457999999998765
Q ss_pred cCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-----hHHHHHHHHhCCc-cCCCCcc-
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET-----EKGIFDAILKGGV-DFESEPW- 320 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~-----~~~~~~~i~~~~~-~~~~~~~- 320 (544)
..... ....++..|+|||.+. ..++.++|||||||++|+|++|..||.... ..+....+..... .......
T Consensus 156 ~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd06621 156 VNSLA-GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234 (287)
T ss_pred ccccc-ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence 43221 2446788999999875 568999999999999999999999997652 2233333332111 1111111
Q ss_pred -cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 321 -LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 321 -~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..+++.+.++|.+||..||.+|||+.|++.||||+..
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 2346789999999999999999999999999999654
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=313.88 Aligned_cols=253 Identities=28% Similarity=0.491 Sum_probs=209.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccc--cChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL--VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~ 170 (544)
.|++.+.||+|+||.||+|.+..++..||+|.+..... ........+.+|+.+++++. |+||+++++++.+. +.+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCEE
Confidence 48999999999999999999999999999998743211 12334567889999999997 99999999998753 568
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+++|||+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcccccccccc
Confidence 89999999999999998877899999999999999999999999999999999999994 445799999999986532
Q ss_pred C----CceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 G----KVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
. .......|+..|+|||++.+ .++.++|+|||||++|+|++|+.||...........+...... ......+++
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~ 236 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK--PMLPDGVSD 236 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC--CCCCcccCH
Confidence 1 11234568999999998864 5789999999999999999999999876655544444332211 112235789
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.+.++|.+||. +|..||++.+++.|||.
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999999999 57999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=322.42 Aligned_cols=250 Identities=23% Similarity=0.310 Sum_probs=202.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCC--eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN--SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.|++.+.||+|+||.||+|.+..++. .+++|.+.. .......+.+.+|+.++.++.+||||+++++++...+.++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE--FASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc--cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 358999999999999999999877665 467776642 1233445678899999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 172 LVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
+||||+++++|.+++.... .+++..++.++.|++.||+|||++||+||||||+|||++ .+.
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---ENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CCC
Confidence 9999999999999997532 478899999999999999999999999999999999994 445
Q ss_pred cEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCc
Q 009091 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~ 313 (544)
.+||+|||++..............+..|+|||++. ..++.++|||||||++|||++ |..||...........+..+..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 79999999986433211111122345799999875 458999999999999999997 9999988877776666654421
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
. +....++..+.+||.+||..||.+||+++++++.
T Consensus 237 -~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 237 -M--EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred -C--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 1223578999999999999999999999998643
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=320.39 Aligned_cols=253 Identities=30% Similarity=0.467 Sum_probs=208.0
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSVHLV 173 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv 173 (544)
|.+.+.||.|+||.||+|.+..++..+|+|++.... ........+.+|+.+++.+. |+||+++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 677889999999999999999999999999997543 22334456788999999998 99999999999887 899999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+++ +|.+++... ..+++..++.++.||+.||+|||+.|++|+||+|+|||++ .++.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEccccceeeccCCC
Confidence 999975 888888765 5799999999999999999999999999999999999994 45679999999998765432
Q ss_pred --ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc---------
Q 009091 253 --VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP--------- 319 (544)
Q Consensus 253 --~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~--------- 319 (544)
......++..|+|||.+.+ .++.++||||||+++|+|++|..||...........+...........
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 2233467889999997653 478999999999999999999999988776655554433211100000
Q ss_pred -----------------ccC-CCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 320 -----------------WLL-ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 320 -----------------~~~-~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
... ++..+.++|.+||..+|.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 011 37889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=320.30 Aligned_cols=246 Identities=24% Similarity=0.393 Sum_probs=205.4
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
..|.+.+.||+|+||.||++.+. .++..+|+|.+... .....+.+.+|+.+++++. ||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Confidence 45899999999999999999853 34567899987432 2344567899999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 169 SVHLVMELCSGGELFDKIIAQG-------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
.+++||||+++++|.+++...+ .+++..+..++.|++.||+|||++|++||||||+|||++ .++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cCC
Confidence 9999999999999999997543 389999999999999999999999999999999999994 445
Q ss_pred cEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHh
Q 009091 236 MLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILK 310 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~ 310 (544)
.+||+|||++........ .....++..|+|||++. ..++.++|||||||++|+|++ |..||...........+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 799999999986543221 12234577899999886 558899999999999999998 9999988877777777766
Q ss_pred CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 311 GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
+..... ...++.++.+|+.+||+.||.+|||+.+++
T Consensus 238 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~ 273 (288)
T cd05093 238 GRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIH 273 (288)
T ss_pred CCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 543221 124788999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=332.05 Aligned_cols=267 Identities=28% Similarity=0.461 Sum_probs=215.0
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
...+.++|.+.+.||+|++|.||+|.+..++..||+|++.... ........+.+|+.+++.+. ||||+++++++...+
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 87 (343)
T cd07851 10 VWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPAS 87 (343)
T ss_pred eecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhccc
Confidence 3445677999999999999999999999999999999885432 12233456778999999997 999999988776554
Q ss_pred e------EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 169 S------VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 169 ~------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
. .++|+||+ +++|.+++.. ..+++..++.++.|++.||.|||+.||+||||||+||+++. ++.++|+||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~---~~~~kL~df 162 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDF 162 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEccc
Confidence 4 89999999 6699888765 57999999999999999999999999999999999999954 457999999
Q ss_pred CCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC----
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE---- 316 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~---- 316 (544)
|++...... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||.+......+..+.......+
T Consensus 163 g~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 163 GLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 999876443 234578899999998753 578899999999999999999999987766555444433211000
Q ss_pred -------------------C----CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 317 -------------------S----EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 317 -------------------~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
. .....+++.+.++|.+||+.||.+|||+.+|++||||.+...+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~ 311 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP 311 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence 0 00123588999999999999999999999999999998876555444
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=329.99 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=200.6
Q ss_pred cccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED- 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 166 (544)
.++|++.+.||+|+||.||+|.+. .+++.||+|++.... .....+.+.+|+.++.++.+|+||+++++++..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 357999999999999999999753 345789999885432 223345678899999999669999999998764
Q ss_pred CCeEEEEEeccCCCChHHHHHHc---------------------------------------------------------
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ--------------------------------------------------------- 189 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 189 (544)
...++++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 46788999999999999988642
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc---eecccCCcc
Q 009091 190 ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAY 262 (544)
Q Consensus 190 ----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~ 262 (544)
..++...+..++.|++.||.|||++||+||||||+|||+.. +..+||+|||++..+..... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~---~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE---NNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC---CCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 25788899999999999999999999999999999999953 45799999999987643221 123356678
Q ss_pred ccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcC
Q 009091 263 YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPK 340 (544)
Q Consensus 263 y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 340 (544)
|+|||++. ..++.++|||||||++|||++ |..||.+....+.+............+ ..+++++.+++.+||+.+|.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAP--EYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCC--ccCCHHHHHHHHHHccCChh
Confidence 99999775 568999999999999999998 999997754444333333332222222 24688999999999999999
Q ss_pred CCCChhhhhCC
Q 009091 341 KRITSAEVLEH 351 (544)
Q Consensus 341 ~Rps~~ell~h 351 (544)
+||++.++++|
T Consensus 319 ~RPs~~ell~~ 329 (337)
T cd05054 319 DRPTFSELVEI 329 (337)
T ss_pred hCcCHHHHHHH
Confidence 99999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=318.42 Aligned_cols=250 Identities=26% Similarity=0.487 Sum_probs=207.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|++|.||+|.+..++..+|||.+.............+.+|+.+++.+. |+||+++++++..++..+++|
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEEEE
Confidence 4889999999999999999999999999999886654444455678889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 175 ELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 175 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+++++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcchhhhcccc
Confidence 99999999998864 34589999999999999999999999999999999999994 445799999999876643
Q ss_pred CCc-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH--HHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKV-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK--GIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .....|+..|+|||.+. ..++.++|+||||+++|+|++|..||.+.... .....+.... .+..+...+++.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYSEE 236 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCCCcccccHH
Confidence 322 23457899999999885 45888999999999999999999999765432 2333333222 222233457889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.++|.+||..||.+|||+.++++
T Consensus 237 ~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 237 LRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHhcCCCcccCCCHHHHHH
Confidence 999999999999999999997753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=312.67 Aligned_cols=252 Identities=30% Similarity=0.558 Sum_probs=216.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||.|+||.||++.+..++..+|+|++..... .......+.+|+++++.+. |+|++++++.+...+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 48889999999999999999999999999999855332 2345667889999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 175 ELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 175 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+++++|.+++... ..+++..+..++.+++.||.|||+.|++|+||+|+||+++. +..++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~---~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS---NGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC---CCcEEECCccceeeccc
Confidence 999999999999774 67999999999999999999999999999999999999954 45799999999987654
Q ss_pred CC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ......|++.|+|||.+. ..++.++|+||+|+++|+|++|..||.................... ...++..+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 232 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELR 232 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHH
Confidence 43 233457899999999875 4588999999999999999999999988776666666655432221 125789999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
++|.+||..+|.+|||+.++|+||||
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=346.99 Aligned_cols=252 Identities=29% Similarity=0.460 Sum_probs=203.0
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--------
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-------- 166 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-------- 166 (544)
.|...+.||+||||.||+|+++-+|+.||||+|.... .......+.+|+.+|.+|. |||||+++..|.+
T Consensus 480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCccccc
Confidence 3677889999999999999999999999999996543 4455677899999999997 9999999876500
Q ss_pred ----------------------------------------------------------------------C---------
Q 009091 167 ----------------------------------------------------------------------R--------- 167 (544)
Q Consensus 167 ----------------------------------------------------------------------~--------- 167 (544)
+
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred --------------------------------CeEEEEEeccCCCChHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHc
Q 009091 168 --------------------------------QSVHLVMELCSGGELFDKIIAQGHY-TEKAAAALCRAIVNVVHHCHFM 214 (544)
Q Consensus 168 --------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~ql~~~l~~lH~~ 214 (544)
..+||-||||+..+|.+++.++... .....+.++++|++||.|+|+.
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 1368999999987777777665444 4778999999999999999999
Q ss_pred CCEeecCCCCceeeecCCCCccEEEeecCCccccc-------------------CCCceecccCCccccCcccccc----
Q 009091 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-------------------EGKVYRDIVGSAYYVAPEVLRR---- 271 (544)
Q Consensus 215 ~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~---- 271 (544)
|||||||||.||+|+ ....|||+|||+|.... +....+..+||..|+|||++.+
T Consensus 717 giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred ceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 999999999999995 44579999999998721 0112345789999999999852
Q ss_pred cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 272 ~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.|+.|+||||||||++||+. ||....++ ..+..+.++.++.+..-+..--+.-..+|++||++||++||||.|||+
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 59999999999999999996 67665544 355666666665552223333456688999999999999999999999
Q ss_pred CCccc
Q 009091 351 HPWMR 355 (544)
Q Consensus 351 hp~f~ 355 (544)
+.||-
T Consensus 871 s~llp 875 (1351)
T KOG1035|consen 871 SELLP 875 (1351)
T ss_pred ccCCC
Confidence 99985
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=313.34 Aligned_cols=244 Identities=25% Similarity=0.415 Sum_probs=203.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||++..+. +..+|+|.+... ....+.+.+|+.+++++. ||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEG----AMSEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEecc-CceEEEEecccC----CccHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEEE
Confidence 48889999999999999998764 567999987532 223457889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccCCCce
Confidence 999999999998753 4689999999999999999999999999999999999994 455799999999886543322
Q ss_pred ee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 254 YR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 254 ~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.. ...++..|+|||++. ..++.++|+||||+++|+|++ |+.||...........+..+...... ...+..+.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~ 232 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVYE 232 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHHH
Confidence 11 224556899999886 568899999999999999999 89999888777777777665432211 245788999
Q ss_pred HHHHhcccCcCCCCChhhhhC
Q 009091 330 LVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~ 350 (544)
++.+||+.||.+||+++++++
T Consensus 233 li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=318.87 Aligned_cols=255 Identities=24% Similarity=0.354 Sum_probs=206.7
Q ss_pred cccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++++. ||||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFT-CHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCC
Confidence 4679999999999999999987642 34579999874322 2233456788999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG----------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
+..++||||+++|+|.+++.... .++...+..++.|++.||.|||++||+||||||+|||++ .+..+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcE
Confidence 99999999999999999997532 245678889999999999999999999999999999995 44579
Q ss_pred EEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCC
Q 009091 238 KATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~ 312 (544)
+|+|||+++....... .....++..|+|||.+. +.++.++|+|||||++|||++ |..||.+....+....+..+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 238 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876543221 11234567899999875 568999999999999999998 788998877777766665543
Q ss_pred ccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC------CCcccc
Q 009091 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE------HPWMRE 356 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~------hp~f~~ 356 (544)
.... ...+++.+.+++.+||+.||.+|||+.++++ ||||..
T Consensus 239 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 239 YLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 3211 1246789999999999999999999999986 899864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=352.81 Aligned_cols=149 Identities=30% Similarity=0.461 Sum_probs=135.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||.|+||+||+|.+..+++.||||++.............+..|+.++..+. ||||+++++++...+.+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999997655444555677889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
|||+.|++|.+++...+.+++..++.++.||+.||.|||.+||+||||||+|||+. .++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCc
Confidence 99999999999998888899999999999999999999999999999999999994 44579999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=326.13 Aligned_cols=265 Identities=31% Similarity=0.426 Sum_probs=209.6
Q ss_pred cceecceecccCCeEEEEEEECCC--CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 009091 95 FYTLGKELGRGQFGITYLCTENST--GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQ 168 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~ 168 (544)
+|++.+.||+|+||.||+|.+..+ +..||+|++.... ........+.+|+.+++++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 388899999999999999999888 8899999885322 2223355678899999999779999999987542 24
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+++++||+. ++|.+.+.....+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCceec
Confidence 6789999985 68999998888899999999999999999999999999999999999994 4457999999999865
Q ss_pred cCCCc-----eecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc--------
Q 009091 249 DEGKV-----YRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV-------- 313 (544)
Q Consensus 249 ~~~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~-------- 313 (544)
..... .....|++.|+|||++.+ .++.++|||||||++|+|++|..||........+..+.....
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 43211 223578999999998753 578999999999999999999999977654433332221100
Q ss_pred ---------------cCCC----CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 314 ---------------DFES----EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 314 ---------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
..+. .....++..+.+||.+||+.||.+|||+.+++.||||.+-..+...+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~ 305 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEP 305 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccc
Confidence 0000 11123578899999999999999999999999999998776544433
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=326.06 Aligned_cols=257 Identities=23% Similarity=0.313 Sum_probs=201.9
Q ss_pred cCCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
....+...++.|.-...||+|+||.||+|.... +..||||++..... .. ..+|.+|+.++.+++ |||+|+++|||
T Consensus 66 s~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~--~~-~~eF~~Ei~~ls~l~-H~Nlv~LlGyC 140 (361)
T KOG1187|consen 66 SYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSG--QG-EREFLNEVEILSRLR-HPNLVKLLGYC 140 (361)
T ss_pred eHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCC--cc-hhHHHHHHHHHhcCC-CcCcccEEEEE
Confidence 334455566778888999999999999999764 48999997744321 11 445999999999998 99999999999
Q ss_pred EeCC-eEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CCEeecCCCCceeeecCCCCccEE
Q 009091 165 EDRQ-SVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFM---GVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 165 ~~~~-~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---~ivHrDikp~Nill~~~~~~~~vk 238 (544)
.+.+ ..+||+||+++|+|.+.|.... .+++.....|+.+++.||+|||.. .|||||||++|||| |.++..|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aK 217 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAK 217 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEE
Confidence 9988 5999999999999999998765 799999999999999999999985 49999999999999 7778999
Q ss_pred EeecCCcccccC-CCceecc-cCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---hHHHHH----HH
Q 009091 239 ATDFGLSVFIDE-GKVYRDI-VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET---EKGIFD----AI 308 (544)
Q Consensus 239 l~Dfg~a~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~---~~~~~~----~i 308 (544)
|+|||+|+.... ....... .||..|+|||.+. +..+.++|||||||+|+||+||+.|..... ...+.. .+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999976654 3333333 8999999999885 679999999999999999999998876432 111121 12
Q ss_pred HhCCccCCCCcc---cCCC-----HHHHHHHHHhcccCcCCCCChhhhh
Q 009091 309 LKGGVDFESEPW---LLIS-----DSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 309 ~~~~~~~~~~~~---~~~~-----~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
..+......++. ..++ ..+..+..+|++.+|..||++.+++
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 222121111111 1222 2355777899999999999999864
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=320.37 Aligned_cols=258 Identities=29% Similarity=0.374 Sum_probs=209.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||+|+||.||+|.+..++..||||.+.+.. .......+..|+.++.++.+|+||+++++++......++|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 45899999999999999999999889999999986532 1233456677888787777799999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+. ++|.+++.. ...+++..+..++.|++.||.|||+ .||+||||+|+||+++ .++.+||+|||++......
T Consensus 93 ~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEEECccccchhccCC
Confidence 99985 477776655 4568999999999999999999997 5999999999999994 4557999999999876544
Q ss_pred CceecccCCccccCcccccc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHhCCccCCCCcccCCCH
Q 009091 252 KVYRDIVGSAYYVAPEVLRR-----SYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.......++..|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+.+..+....... .+....++.
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 247 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-LPPNEGFSP 247 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC-CCCCCCCCH
Confidence 33344568889999998753 378899999999999999999999976433 23344444332211 122224788
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
++.+||.+||..||.+||++.+++.||||....
T Consensus 248 ~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 248 DFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 999999999999999999999999999998653
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=317.80 Aligned_cols=257 Identities=32% Similarity=0.551 Sum_probs=216.5
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..+.|.+.+.||+|++|.||+|.+..++..+++|++..... ..+.+.+|+.+++.+. |+||+++++++...+..+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCK-HPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEEE
Confidence 45568999999999999999999998899999999854321 4567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+|+||+++++|.+++.... .++...+..++.|++.||.|||+.||+|+||+|+||+++ .++.++|+|||++.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhhhcc
Confidence 9999999999999998876 899999999999999999999999999999999999995 445799999999876543
Q ss_pred CC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ......++..|+|||.+. ..++.++|+|||||++|+|++|..||...........+...... .......++..++
T Consensus 169 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 247 (286)
T cd06614 169 EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLKNPEKWSPEFK 247 (286)
T ss_pred chhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCcchhhCCHHHH
Confidence 21 222346788999999875 45889999999999999999999999877665554444433221 1122234788999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++|.+||+.+|.+||++.++++|+||+..
T Consensus 248 ~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 248 DFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 99999999999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=329.52 Aligned_cols=263 Identities=32% Similarity=0.456 Sum_probs=216.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----e
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-----S 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~ 169 (544)
+|++.+.||.|++|.||+|.+..++..+|+|++.... ......+.+.+|+.+++.+. |+||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccc
Confidence 4889999999999999999999889999999885432 22344567889999999997 999999999987765 7
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+|+||||++ ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~---~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS---NCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEcccCceEeec
Confidence 899999997 489998888778999999999999999999999999999999999999944 4679999999998765
Q ss_pred CCC----ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC-----
Q 009091 250 EGK----VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE----- 318 (544)
Q Consensus 250 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~----- 318 (544)
... ......+++.|+|||++.+ .++.++|+||||+++|+|++|..||........+..+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 542 2334578899999998853 58899999999999999999999998877665555444321110000
Q ss_pred ----------------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCC
Q 009091 319 ----------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363 (544)
Q Consensus 319 ----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 363 (544)
....++..+.++|.+||++||.+||++++++.||||+....+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 301 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE 301 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence 012357889999999999999999999999999999877665443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=310.81 Aligned_cols=253 Identities=33% Similarity=0.555 Sum_probs=213.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~l 172 (544)
+|++.+.||+|++|.||+|.+..++..+++|++..... .....+.+.+|+.+++++. |+||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 37888999999999999999998999999998865432 2345678899999999998 99999999999988 89999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
++||+++++|.+++.....+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||.+.......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CCCEEEcccccEEeccccc
Confidence 9999999999999988888999999999999999999999999999999999999954 4579999999998776544
Q ss_pred c---eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 253 V---YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 253 ~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
. .....++..|+|||.+.. .++.++||||||+++|+|++|..||..... ......+...... ......++..+
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 233 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP--PEIPEHLSEEA 233 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCC--cCCCcccCHHH
Confidence 2 344678999999998864 489999999999999999999999977652 2222222211111 11223458899
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.++|.+||..||.+||++.+++.||||
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=309.51 Aligned_cols=250 Identities=32% Similarity=0.566 Sum_probs=211.4
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||+|++|.||++.+..++..+++|++..... .....+.+|+.+++.+. |+||+++++.+...+..++++|
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEe
Confidence 7788999999999999999998999999998854322 35678889999999998 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce
Q 009091 176 LCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~ 254 (544)
|+++++|.+++... ..+++..+..++.|++.||.+||..|++||||+|+||+++. ++.++|+|||.+.........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~~~ 154 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLSDTKAR 154 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc---CCeEEEeeccccccccccccc
Confidence 99999999998776 57999999999999999999999999999999999999954 457999999999877654323
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
....|+..|+|||.+. ..++.++|+||||+++|+|++|..||...........+....... ......++..+.++|.+
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPG-LRNPEKWSDEFKDFLKK 233 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCC-cCcccccCHHHHHHHHH
Confidence 4567899999999876 447889999999999999999999998775444433333322111 11122348899999999
Q ss_pred hcccCcCCCCChhhhhCCCc
Q 009091 334 MLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~hp~ 353 (544)
||+.||++|||+.++|+|||
T Consensus 234 ~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HccCChhhCCCHHHHhcCCC
Confidence 99999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=309.87 Aligned_cols=252 Identities=29% Similarity=0.520 Sum_probs=214.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|.+.+.||+|++|.||++.+..++..|++|.+..... .....+.+.+|+++++++. |+||+++++++...+.++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEE
Confidence 38889999999999999999998999999999865432 2345678899999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc-
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV- 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~- 253 (544)
||+++++|.+++.....+++..++.++.|++.||.|||+.||+||||+|+||+++. ++.++|+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK---DGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC---CCCEEEeccccceecCCCccc
Confidence 99999999999988888999999999999999999999999999999999999954 45799999999987654332
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....|+..|+|||.+. ..++.++|+||||+++|+|++|..||...........+...... .....+++.+.++|.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~ 232 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHP---PLPEGISPELKDFLM 232 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCC---CCCCCCCHHHHHHHH
Confidence 23456889999999875 34788999999999999999999999876654444333322221 122357899999999
Q ss_pred HhcccCcCCCCChhhhhCCCcc
Q 009091 333 KMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f 354 (544)
+||..+|++|||+.+++.||||
T Consensus 233 ~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=327.72 Aligned_cols=254 Identities=18% Similarity=0.273 Sum_probs=199.8
Q ss_pred ceeccc--CCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 100 KELGRG--QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 100 ~~lg~G--~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
..||.| +||+||+|.+..+++.||+|++..... .....+.+.+|+.+++.+. ||||+++++++..++..++||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecc
Confidence 456666 999999999999999999998864432 2334577889999999997 999999999999999999999999
Q ss_pred CCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc--
Q 009091 178 SGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-- 253 (544)
Q Consensus 178 ~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~-- 253 (544)
.+++|.+++... ..+++..+..++.|++.||+|||+.||+||||||+|||+.. ++.++++||+.+........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~---~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG---DGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC---CCcEEEechHHHhhhhccCccc
Confidence 999999988764 35899999999999999999999999999999999999954 45799999986543221100
Q ss_pred ------eecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC---------
Q 009091 254 ------YRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF--------- 315 (544)
Q Consensus 254 ------~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~--------- 315 (544)
.....++..|+|||++.+ .++.++|||||||++|+|++|..||...................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 011235667999999854 37899999999999999999999997765444333322211100
Q ss_pred ----------------------------------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 316 ----------------------------------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 316 ----------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..+....+++.+.+||++||+.||.+|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 0011123567899999999999999999999999999997653
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=317.50 Aligned_cols=254 Identities=29% Similarity=0.428 Sum_probs=206.4
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCe----
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYEDRQS---- 169 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~---- 169 (544)
|++.+.||+|+||.||+|.++.++..+|+|++..... .......+.+|+.+++++. .|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999998899999999864332 2222345667888888775 49999999999987776
Q ss_pred -EEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 170 -VHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 170 -~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
++++|||+.+ +|.+++.... .+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.+||+|||++.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~---~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---DGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc---CCCEEEeccCcce
Confidence 9999999975 8988887643 4899999999999999999999999999999999999954 4679999999998
Q ss_pred cccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc-----CC----
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD-----FE---- 316 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~-----~~---- 316 (544)
............++..|+|||++. ..++.++|+|||||++|+|++|..||......+....+...... ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 765544434456889999999875 45889999999999999999999999887776665555431100 00
Q ss_pred -------C-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 317 -------S-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 317 -------~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. .....+++.+.++|.+||+.||.+||++.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0 0011346788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=319.40 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=204.8
Q ss_pred ccceecceecccCCeEEEEEEECCCC----------------CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTG----------------NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNI 157 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----------------~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i 157 (544)
++|++.+.||+|+||.||+|.+...+ ..||+|.+.... .....+.+.+|++++++++ ||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLS-DPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcC-CCCE
Confidence 56999999999999999999876543 457999875432 2345677889999999997 9999
Q ss_pred eEEEEEEEeCCeEEEEEeccCCCChHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCce
Q 009091 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-----------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENF 226 (544)
Q Consensus 158 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Ni 226 (544)
+++++++..++..+++|||+++++|.+++.... .+++..++.++.|++.||.|||+.||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999997765 689999999999999999999999999999999999
Q ss_pred eeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh--CCCCCCCCC
Q 009091 227 LLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS--GVPPFWAET 300 (544)
Q Consensus 227 ll~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t--g~~pf~~~~ 300 (544)
+++. .+.++|+|||++........ .....+++.|+|||.+. +.++.++|||||||++|||++ +..||....
T Consensus 162 li~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 162 LVGK---NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred eecC---CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 9954 46799999999876543321 22345677899999875 468999999999999999998 778887766
Q ss_pred hHHHHHHHHhC----CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 301 EKGIFDAILKG----GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 301 ~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
....+..+... ......+....++.++.++|.+||+.||.+|||+.+|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 239 DQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 66665554432 111111122346789999999999999999999999954
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=323.79 Aligned_cols=248 Identities=22% Similarity=0.298 Sum_probs=201.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCe----EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNS----YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..|++.+.||+|+||.||+|.+..++.. ||+|++... ........+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-C
Confidence 3599999999999999999998766654 888887432 22344567889999999997 99999999998764 5
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++|+||+++|+|.+++... ..++...+..++.||+.||+|||+.||+||||||+|||++ .+..+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEccccccccc
Confidence 67999999999999999874 4588999999999999999999999999999999999994 4457999999999876
Q ss_pred cCCCcee---cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 249 DEGKVYR---DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 249 ~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
....... ...++..|+|||++. ..++.++|||||||++|||++ |..||.+......... .......+.+ ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~ 236 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LEKGERLPQP--PIC 236 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HhCCCCCCCC--CCC
Confidence 5432211 223466899999875 568999999999999999998 9999987766554433 3333333322 246
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+..+.+++.+||..||.+||++.+++.+
T Consensus 237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 237 TIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=311.98 Aligned_cols=242 Identities=26% Similarity=0.385 Sum_probs=198.6
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|.+..++..+|+|.+... ........+.+|+++++.+. ||||+++++++.....+++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccC
Confidence 4699999999999999999999999987532 23444567889999999997 99999999999999999999999999
Q ss_pred CChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCcee---
Q 009091 180 GELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--- 255 (544)
Q Consensus 180 ~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~--- 255 (544)
++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++..........
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccccccCC
Confidence 99999987644 589999999999999999999999999999999999994 44579999999987654321111
Q ss_pred cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 256 DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 256 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
...++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+.... ... ....++..+.+++.+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~ 231 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-RLP--CPELCPDAVYRLMER 231 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-CCC--CcccCCHHHHHHHHH
Confidence 112345699999875 568899999999999999998 889997766655555544432 112 223568899999999
Q ss_pred hcccCcCCCCChhhhhC
Q 009091 334 MLIQDPKKRITSAEVLE 350 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~ 350 (544)
||..||++|||+.++++
T Consensus 232 ~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 232 CWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=312.13 Aligned_cols=245 Identities=38% Similarity=0.691 Sum_probs=212.8
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||.|+||.||++.+..++..+|+|++.+...........+.+|+.+++++. |+||+++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999999889999999987665444445678899999999998 9999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-CceecccCC
Q 009091 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYRDIVGS 260 (544)
Q Consensus 182 L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~gt 260 (544)
|.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++...... .......|+
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA---DGHIKLTDFGLAKELSSEGSRTNTFCGT 156 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC---CCcEEEeecCcceecccCCCcccCCcCC
Confidence 9999988888999999999999999999999999999999999999954 457999999998876543 233456788
Q ss_pred ccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCc
Q 009091 261 AYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 261 ~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 339 (544)
..|+|||.+. ..++.++|+||||+++|+|++|..||...........+......++. .++..+.++|.+||..||
T Consensus 157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~i~~~l~~~p 232 (250)
T cd05123 157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE----FLSPEARDLISGLLQKDP 232 (250)
T ss_pred ccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHhcCCH
Confidence 9999999875 44788999999999999999999999877766666666654333322 458899999999999999
Q ss_pred CCCCCh---hhhhCCCcc
Q 009091 340 KKRITS---AEVLEHPWM 354 (544)
Q Consensus 340 ~~Rps~---~ell~hp~f 354 (544)
.+||++ +++++||||
T Consensus 233 ~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 233 TKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred hhCCCcccHHHHHhCCCC
Confidence 999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=313.10 Aligned_cols=245 Identities=22% Similarity=0.340 Sum_probs=205.4
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|.+.+.||+|+||.||+|.+..++..+|+|++... ......+.+|+.+++++. |+||+++++++...+.+++||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEEE
Confidence 488889999999999999999999999999987532 233567889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+|||++ .++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCccccccccce
Confidence 999999999998764 3588999999999999999999999999999999999994 44579999999998765432
Q ss_pred cee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 253 VYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 253 ~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
... ...++..|+|||.+. ..++.++|||||||++|||++ |..||.+....+....+..+ ... .....++.++.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~ 235 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRM--ERPEGCPPKVY 235 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCC--CCCCCCCHHHH
Confidence 211 123456799999875 568899999999999999998 99999887766666665443 221 22235789999
Q ss_pred HHHHHhcccCcCCCCChhhhhC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~ 350 (544)
++|.+||+.||++||++.++++
T Consensus 236 ~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 236 ELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHccCCcccCCCHHHHHH
Confidence 9999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=318.46 Aligned_cols=255 Identities=26% Similarity=0.442 Sum_probs=211.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
...|...+.||+|+||.||+|.+..++..+|+|.+.............+.+|+.+++.+. |+|++++++++......++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEE
Confidence 345888899999999999999999999999999886433333344566788999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+. ++|.+.+.. ...+++..+..++.|++.||.|||+.+++||||+|+|||++. ++.++|+|||++......
T Consensus 93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---PGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC---CCcEEECCcccceeecCc
Confidence 999996 578777654 456899999999999999999999999999999999999944 457999999998765432
Q ss_pred CceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
....|++.|+|||.+. +.++.++|||||||++|+|++|..||...........+..+... ......++..+
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 243 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--ALQSGHWSEYF 243 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCC--CcCcccccHHH
Confidence 2356889999999863 35788999999999999999999999876555444444433222 11123578899
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+||.+||..+|.+||++.++++|||+...
T Consensus 244 ~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 999999999999999999999999999875
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=318.50 Aligned_cols=256 Identities=30% Similarity=0.552 Sum_probs=211.9
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.....||+|+||.||++....++..||+|++... .......+.+|+.+++.+. |+||+++++.+...+..++|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEe
Confidence 44456799999999999999999999999987432 2334567889999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-ce
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VY 254 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~ 254 (544)
|+++++|.+++. .+.+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++....... ..
T Consensus 98 ~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~~~ 173 (292)
T cd06657 98 FLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRR 173 (292)
T ss_pred cCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccccc
Confidence 999999988764 45689999999999999999999999999999999999994 44579999999987654322 22
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
....|++.|+|||.+. ..++.++|+||+|+++|+|++|..||...........+.... +........+++.+.++|.+
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~ 252 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPKLKNLHKVSPSLKGFLDR 252 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-CcccCCcccCCHHHHHHHHH
Confidence 3457899999999875 457899999999999999999999998766655544443322 11121223568899999999
Q ss_pred hcccCcCCCCChhhhhCCCccccCCCC
Q 009091 334 MLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
||+.||.+||++.++++||||.+...+
T Consensus 253 ~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 253 LLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred HHhCCcccCcCHHHHhcChHHhccCCC
Confidence 999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=316.81 Aligned_cols=248 Identities=21% Similarity=0.304 Sum_probs=203.6
Q ss_pred cceecceecccCCeEEEEEEEC----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTEN----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.|++.+.||+|+||+||+|... .++..+|+|.+... ........+.+|+.+++++. ||||+++++++......
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCce
Confidence 4888999999999999999853 45678999988532 22344567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 171 HLVMELCSGGELFDKIIAQ-----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++ .
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~---~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG---E 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---C
Confidence 9999999999999998532 2367888999999999999999999999999999999995 4
Q ss_pred CccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 009091 234 GAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i 308 (544)
...+||+|||++....... ......++..|+|||++. +.++.++|+|||||++|||++ |..||.+.........+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 4579999999998654322 122345667899999875 568999999999999999998 99999887766666655
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
...... + ....+++.+.++|.+||+.||.+||++.+++++
T Consensus 240 ~~~~~~-~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 240 RKRQLL-P--CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HcCCcC-C--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 543321 1 223578999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=311.49 Aligned_cols=241 Identities=27% Similarity=0.326 Sum_probs=198.9
Q ss_pred eecccCCeEEEEEEE--CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 101 ELGRGQFGITYLCTE--NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
.||+|+||.||+|.+ ..++..+|+|++.... ......+.+.+|+.+++.+. ||||+++++++. ....++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999965 4567899999875332 23445677889999999997 999999999875 456789999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce----
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY---- 254 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---- 254 (544)
+++|.+++.....+++..+..++.|++.||.|||++||+||||||.|||+. .+..+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCCCCeeeec
Confidence 999999998888899999999999999999999999999999999999994 4457999999999876443221
Q ss_pred ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 255 RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 255 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....++..|+|||.+. ..++.++|||||||++|||++ |..||...........+..+.. ... ...+++++.++|.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~~~--~~~~~~~l~~li~ 232 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-MEC--PQRCPPEMYDLMK 232 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-CCC--CCCCCHHHHHHHH
Confidence 1223457899999886 458889999999999999998 9999988777777666655432 222 2357899999999
Q ss_pred HhcccCcCCCCChhhhhC
Q 009091 333 KMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~ 350 (544)
+||+.||.+||++++|..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 233 LCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHhccCchhCcCHHHHHH
Confidence 999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=318.95 Aligned_cols=251 Identities=26% Similarity=0.386 Sum_probs=204.4
Q ss_pred cccceecceecccCCeEEEEEEE-----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTE-----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|.+.+.||+|+||.||+|.+ ..++..+|+|.+.... .....+.+.+|+.+++++.+||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 45699999999999999999975 2345579999875432 2334567889999999995599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
+.+++||||+++++|.+++.... .+++..+..++.|++.||.|||+++|+|+||||+|||++ .+..++|+|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCccc
Confidence 99999999999999999987643 389999999999999999999999999999999999994 4457999999999
Q ss_pred ccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 246 VFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 246 ~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||..................... .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~ 266 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQ--P 266 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCC--C
Confidence 86543221 11234577899999875 568999999999999999998 99999877655544444443332222 2
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...++.+.+++.+||.++|++|||+.++++
T Consensus 267 ~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 267 EHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 346889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=326.47 Aligned_cols=266 Identities=32% Similarity=0.470 Sum_probs=211.1
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--C
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--Q 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~ 168 (544)
.+.++|.+.+.||+|+||.||+|.+..++..+|+|++.+.. ........+.+|+.+++++.+||||+++++++... .
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 35677999999999999999999999899999999885432 22333456778999999994499999999988643 4
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+++||||++ ++|..++... .+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSL 157 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhcc
Confidence 6899999997 4898888665 78889999999999999999999999999999999999 45568999999999865
Q ss_pred cCCC------ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc-------
Q 009091 249 DEGK------VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV------- 313 (544)
Q Consensus 249 ~~~~------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~------- 313 (544)
.... ......|+..|+|||++. ..++.++||||||+++|+|++|+.||.+.........+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 4322 223356899999999874 3578899999999999999999999976654443332221110
Q ss_pred --------------------cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 314 --------------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 314 --------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
.........++.++.++|.+||+.||.+|||+.++++||||........
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~ 306 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSD 306 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCC
Confidence 0001111236889999999999999999999999999999987654433
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=311.90 Aligned_cols=251 Identities=25% Similarity=0.490 Sum_probs=207.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||.||+|.+..++..||+|.+...........+.+.+|+.+++++. |+||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 45999999999999999999999999999999886544444455678899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 174 MELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||+++++|..++.. ...+++..+..++.+++.||.|||+.||+||||+|+||+++. ++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~---~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA---TGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC---CCcEEEeccceeeecc
Confidence 999999999998864 244899999999999999999999999999999999999954 4579999999987654
Q ss_pred CCC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
... ......|++.|+|||.+. ..++.++|+|||||++|+|++|..||..... ......+..+.. +..+...++.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSE 235 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCH
Confidence 322 223457889999999875 4588999999999999999999999965432 223333333322 2222235788
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.++|.+||..+|++|||+.+|++
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=310.95 Aligned_cols=246 Identities=22% Similarity=0.360 Sum_probs=204.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||++.+.. +..+|+|.+.... ...+.+.+|+.+++++. ||||+++++++.....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS----MSEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc----ccHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEE
Confidence 348899999999999999998764 4569999875332 23467889999999997 99999999999988899999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+.+++|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+|||++ .++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecCCCc
Confidence 9999999999998764 4689999999999999999999999999999999999994 44579999999987654432
Q ss_pred cee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 253 VYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 253 ~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
... ...++..|+|||++. ..++.++|||||||++|+|++ |..||...........+..+...... ...+..++
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKVY 231 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHHH
Confidence 211 223567899999886 568899999999999999998 99999887777777776655332221 24688999
Q ss_pred HHHHHhcccCcCCCCChhhhhCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++.+||..||.+||++.+++.+
T Consensus 232 ~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 232 AIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHcCCCcccCCCHHHHHHh
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=328.98 Aligned_cols=255 Identities=31% Similarity=0.550 Sum_probs=234.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
.+++..||-||||.|-++..+.....+|+|++++.........+.+..|-.+|..++ .|.||++|..|.+..++|++||
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhHH
Confidence 556678999999999999887666679999998888777777888999999999998 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCcee
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR 255 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~ 255 (544)
-|-||.|...|+.++.+.+..++.++.-+++|++|||++|||+|||||+|.|| +.++.+||.|||+|+.+..+...+
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~KTw 577 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRKTW 577 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCcee
Confidence 99999999999999999999999999999999999999999999999999999 667799999999999999999999
Q ss_pred cccCCccccCcccc-cccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHh
Q 009091 256 DIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334 (544)
Q Consensus 256 ~~~gt~~y~aPE~~-~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 334 (544)
++||||.|.|||++ +...+.++|.||||+++|||++|.+||.+......+..|+++.-.+..| ..++..+.+||+++
T Consensus 578 TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Lik~L 655 (732)
T KOG0614|consen 578 TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLIKKL 655 (732)
T ss_pred eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHHHHH
Confidence 99999999999975 5779999999999999999999999999999999999999986555444 46889999999999
Q ss_pred cccCcCCCCC-----hhhhhCCCcccc
Q 009091 335 LIQDPKKRIT-----SAEVLEHPWMRE 356 (544)
Q Consensus 335 l~~dp~~Rps-----~~ell~hp~f~~ 356 (544)
...+|.+|.- +.+|-+|.||..
T Consensus 656 Cr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 656 CRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred HhcCcHhhhccccCChHHHHhhhhhhc
Confidence 9999999987 789999999964
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=314.52 Aligned_cols=245 Identities=30% Similarity=0.468 Sum_probs=198.6
Q ss_pred eecceecccCCeEEEEEEEC----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 97 TLGKELGRGQFGITYLCTEN----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.+.||.|+||.||+|... ..+..|+||.+.. .......+.+.+|++.+++++ ||||+++++++...+..++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~--~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP--SSSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST--TSSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc--ccccccceeeeeccccccccc-ccccccccccccccccccc
Confidence 35678999999999999987 4466799998843 223445788999999999995 9999999999998888999
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||+++|+|.+++... ..++...+..++.|++.||.|||+++|+|+||+++|||++. ++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~---~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS---NGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET---TTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 99999999999999986 67999999999999999999999999999999999999954 45899999999987733
Q ss_pred CCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 GKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.... ....+...|+|||.+. ..++.++||||||+++|||++ |..||...........+..+.. .. ....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 232 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-LP--IPDNCPK 232 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE-TT--SBTTSBH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ce--eccchhH
Confidence 2221 2235677899999986 458999999999999999999 7899988877777777755433 22 2235789
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.++|..||..||.+|||+.++++
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999999999999999999999874
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=325.67 Aligned_cols=269 Identities=26% Similarity=0.432 Sum_probs=213.3
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.+..+.++|.+.+.||+|+||.||+|.+..++..||+|++.+... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~ 88 (345)
T cd07877 11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPA 88 (345)
T ss_pred HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcC-CCcccceeeeeeec
Confidence 345567889999999999999999999999999999998864321 2233456788999999997 99999999987543
Q ss_pred ------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 168 ------QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 168 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
...+++++++ +++|.+++.. ..+++..++.++.|++.||.|||+.||+||||||+||+++ .++.+||+|
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~d 163 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILD 163 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEec
Confidence 3478888887 7799877654 4699999999999999999999999999999999999995 445799999
Q ss_pred cCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc------
Q 009091 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV------ 313 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~------ 313 (544)
||++...... .....|+..|+|||++.+ .++.++|||||||++|+|++|+.||........+..+.....
T Consensus 164 fg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T cd07877 164 FGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 241 (345)
T ss_pred cccccccccc--ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998765432 234578899999998754 578899999999999999999999976655444333322110
Q ss_pred -----------------cCCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcc
Q 009091 314 -----------------DFESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365 (544)
Q Consensus 314 -----------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~ 365 (544)
..+.. .....++++.++|.+||..||.+||++.++++||||++...+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~ 314 (345)
T cd07877 242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 314 (345)
T ss_pred HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCcccc
Confidence 00000 01135788999999999999999999999999999998766555543
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=312.02 Aligned_cols=249 Identities=23% Similarity=0.403 Sum_probs=206.3
Q ss_pred ccceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.|++.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|+.+++.+. ||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCce
Confidence 4589999999999999999998644 4579999875432 2334567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+++++|.+++... +.++...+..++.|++.||.|||+++|+||||||+|||++ .+..++|+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchhhccc
Confidence 9999999999999998764 4689999999999999999999999999999999999994 44579999999998764
Q ss_pred CC-Ccee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 250 EG-KVYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 250 ~~-~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.. .... ...++..|+|||.+. ..++.++||||||+++|+|++ |..||...........+..... . +....++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 234 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR-L--PPPMDCP 234 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-C--CCCCCCC
Confidence 21 1111 223457899999876 568999999999999999998 9999988777777666654422 1 2223578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+.+.+++.+||+.+|.+||++.+++++
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=319.58 Aligned_cols=257 Identities=30% Similarity=0.488 Sum_probs=206.7
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ--- 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--- 168 (544)
..+.|++.+.||.|+||.||+|.++.++..||+|++..... .......+.+|+.++++++ ||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhh
Confidence 34569999999999999999999999999999998865332 2233456778999999997 999999999887654
Q ss_pred -------eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 169 -------SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 169 -------~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.+++|+||+++ +|...+... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~ 158 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLA 158 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeC
Confidence 79999999976 777777653 468999999999999999999999999999999999999 445679999
Q ss_pred ecCCcccccCCC--ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC
Q 009091 241 DFGLSVFIDEGK--VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 241 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|+.||........+..+........
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC 238 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999998764332 1223356788999998753 478899999999999999999999987665554444333111000
Q ss_pred C--------------------------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 317 S--------------------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 317 ~--------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. ..+..++..+.++|.+||..||.+||++.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0 0112468899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=317.43 Aligned_cols=253 Identities=32% Similarity=0.501 Sum_probs=206.8
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||+|++|+||+|....++..|++|++..... ........+|+..++++.+|+||+++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY--SWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc--chhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999998899999998854321 12233455799999999779999999999999999999999
Q ss_pred ccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 176 LCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|+ +++|.+.+.... .+++..+..++.|++.+|.|||++|++|+||+|+||+++ ..+.++|+|||++........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeecccceeccCCCC
Confidence 99 779999888765 789999999999999999999999999999999999994 456799999999987765444
Q ss_pred eecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC----------------
Q 009091 254 YRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF---------------- 315 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~---------------- 315 (544)
.....|+..|+|||++. ..++.++|+||||+++|+|++|..||...........+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 45567899999999874 347899999999999999999999997766544433322110000
Q ss_pred -C---------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 316 -E---------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 316 -~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
. .......+..+.++|.+||+.||.+|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0 00011236789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=318.68 Aligned_cols=255 Identities=32% Similarity=0.535 Sum_probs=207.8
Q ss_pred ceecceecccCCeEEEEEEEC---CCCCeEEEEEEeeccccC-hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 96 YTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLVN-KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
|++.+.||+|++|.||++.+. .++..||+|.+.+..... ......+.+|+.++.++.+||||+++++.+.....++
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 788899999999999999864 467889999886543221 2334567899999999987999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++.....+++..++.++.|++.||.|||+.|++||||+|+||++. .+..++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECccccccccc
Confidence 9999999999999998878899999999999999999999999999999999999994 4457999999998765433
Q ss_pred Cc--eecccCCccccCccccccc---CCCcchHHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHhCCccCCCCcccC
Q 009091 252 KV--YRDIVGSAYYVAPEVLRRS---YGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 252 ~~--~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~~l~el~tg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~ 322 (544)
.. .....|+..|+|||.+.+. .+.++|+||||+++|+|++|..||..... ......+...... ....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 234 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP----FPKT 234 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC----CCcc
Confidence 21 1234689999999987532 68899999999999999999999964322 2233333333222 2234
Q ss_pred CCHHHHHHHHHhcccCcCCCCC---hhhhhCCCccccC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMREG 357 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 357 (544)
++..+.++|.+||+.||++||| +.++|+||||+.-
T Consensus 235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 7889999999999999999998 4677999999763
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=301.12 Aligned_cols=256 Identities=27% Similarity=0.497 Sum_probs=226.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+++.||+|+|++|.+++.+.|.+.+|+|+++++-.....+.+=...|-.+...-++||.+|-++.+|..+.++++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 45899999999999999999999999999999998887777777777778888898888999999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc-ccCCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF-IDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~-~~~~~ 252 (544)
.||++||+|--.+.+++.+|+++++.+..+|+.||.|||++||++||||.+|||+ +.++.+||+|+|+++. +.+++
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCCc
Confidence 9999999998888888999999999999999999999999999999999999999 6667899999999986 45667
Q ss_pred ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCC--------CChHHHHHHHHhCCccCCCCcccCC
Q 009091 253 VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWA--------ETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~--------~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..++++|||.|.|||++++ .|+.++|.|+|||+++||+.|+.||.- .++.-+++-|+...+..+. .+
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr----sl 482 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----SL 482 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----ee
Confidence 7788999999999999985 599999999999999999999999952 2233456667776666554 36
Q ss_pred CHHHHHHHHHhcccCcCCCCC------hhhhhCCCcccc
Q 009091 324 SDSAKDLVRKMLIQDPKKRIT------SAEVLEHPWMRE 356 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps------~~ell~hp~f~~ 356 (544)
+-.+..+++..|++||.+|.. ++++-.|+||+.
T Consensus 483 svkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 777889999999999999975 578889999974
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=316.18 Aligned_cols=247 Identities=24% Similarity=0.388 Sum_probs=203.9
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.|.+.+.||+|+||.||+|.+. .++..+++|.+... .....+.+.+|+.+++++. |+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCC
Confidence 34888999999999999999854 34556888877432 2334467889999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD 232 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~ 232 (544)
..++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~--- 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG--- 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---
Confidence 9999999999999999997542 378899999999999999999999999999999999994
Q ss_pred CCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 009091 233 GGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDA 307 (544)
Q Consensus 233 ~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~ 307 (544)
.++.++|+|||++........ .....|+..|+|||.+. ..++.++|||||||++|+|++ |..||.........+.
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 455799999999976543321 12345678899999875 558899999999999999999 9999988777777766
Q ss_pred HHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 308 ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 308 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+..... ...++..+.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 238 ITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 655433221 2246889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=316.58 Aligned_cols=247 Identities=20% Similarity=0.291 Sum_probs=204.8
Q ss_pred cceecceecccCCeEEEEEEECCC-----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 95 FYTLGKELGRGQFGITYLCTENST-----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.|++.+.||.|+||.||+|.+..+ +..||+|++.... .....+.+.+|+.++..+. ||||+++++++...+.
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCCc
Confidence 488899999999999999987543 5789999885332 2334567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 170 VHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
.++++||+.+++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+. .
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---D 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---C
Confidence 99999999999999998532 2478888999999999999999999999999999999995 4
Q ss_pred CccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 009091 234 GAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i 308 (544)
+..+||+|||+++....... .....+++.|+|||++. +.++.++|||||||++|||++ |..||.+....+....+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 45799999999886543222 12335678899999874 668999999999999999998 88899887777777777
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
........ ...++..+.+|+..||+.+|.+||++.+|+.
T Consensus 240 ~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 240 RNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 66543221 2357899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=312.00 Aligned_cols=243 Identities=25% Similarity=0.351 Sum_probs=196.3
Q ss_pred ceecccCCeEEEEEEECCCCCe--EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 100 KELGRGQFGITYLCTENSTGNS--YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
+.||+|+||.||+|.+..++.. +++|.+... ......+.+.+|+.++.++.+||||+++++++...+.+++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 3589999999999999887764 577766432 223445678899999999966999999999999999999999999
Q ss_pred CCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 178 SGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 178 ~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
++++|.+++.... .++...+..++.|++.||+|||+.|++||||||+|||++ .+..+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeEEECC
Confidence 9999999987543 378899999999999999999999999999999999994 456799999
Q ss_pred cCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
||++..............+..|+|||++. ..++.++|||||||++|||++ |..||...........+..+. .. +.
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~--~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RL--EK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-CC--CC
Confidence 99986432211111223456799999875 458899999999999999997 999998777666666554432 11 12
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...++.++.+++.+||..||.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2346889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=328.59 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=203.1
Q ss_pred cccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.+.|.+++.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+|.++..||||+++++++...
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 356888999999999999999864 345689999986432 2233457889999999997799999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC---------------------------------------------------------
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG--------------------------------------------------------- 190 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 190 (544)
+.+++||||+++|+|.+++...+
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999999986532
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 191 -----------------------------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 191 -----------------------------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
.++...+..++.|++.||.|||+.+|+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 245667788999999999999999999999999999995
Q ss_pred cCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
. ...+||+|||++........ .....++..|+|||++. ..++.++|||||||++|||++ |..||......+.
T Consensus 274 ~---~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 274 E---GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred C---CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 4 45799999999986533211 12345778899999875 458899999999999999998 8999977665555
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.............+ ..++.++.+||.+||..+|.+||++++|++.
T Consensus 351 ~~~~~~~~~~~~~p--~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 351 FYNAIKRGYRMAKP--AHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHHcCCCCCCC--CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 44444433332222 3578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=317.97 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=205.9
Q ss_pred cccceecceecccCCeEEEEEEECCC-----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST-----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++++.+|+||+++++++...
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 45699999999999999999987643 3679999875432 2334466889999999995699999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~ 231 (544)
+.++++|||+++++|..++... ..+++..+..++.|++.||.|||+.||+||||||+|||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~-- 166 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT-- 166 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc--
Confidence 9999999999999999998642 3578899999999999999999999999999999999995
Q ss_pred CCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 009091 232 DGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFD 306 (544)
Q Consensus 232 ~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~ 306 (544)
.++.+||+|||++......... ....++..|+|||++. ..++.++|||||||++|||++ |..||.+........
T Consensus 167 -~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 167 -EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred -CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 4457999999999876543221 1223456799999875 568999999999999999997 999998877766666
Q ss_pred HHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 307 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.+..+.. .. ....++..+.+|+.+||..||.+|||+.+++++
T Consensus 246 ~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 246 LLKEGYR-ME--KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHcCCc-CC--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 6554422 11 122568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=312.60 Aligned_cols=248 Identities=23% Similarity=0.304 Sum_probs=201.9
Q ss_pred ceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe---
Q 009091 96 YTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS--- 169 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--- 169 (544)
|.+++.||+|+||.||+|.+..+ +..||+|++.... ........+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCcccc
Confidence 56789999999999999987653 4789999885432 23344567889999999997 9999999998865443
Q ss_pred ---EEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 170 ---VHLVMELCSGGELFDKIIAQ------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 170 ---~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.+++|||+++++|..++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .+..+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCCeEEEC
Confidence 79999999999999888542 3589999999999999999999999999999999999994 44579999
Q ss_pred ecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccC
Q 009091 241 DFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 241 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
|||+++........ ....++..|+|||.+. ..++.++|||||||++|||++ |..||.+.......+.+..+...
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 234 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL- 234 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 99999876433221 1123567899999875 558999999999999999999 88999887777777666654322
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.. ...+++.+.++|.+||+.||.+||++.+++++
T Consensus 235 ~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 235 KQ--PEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CC--CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 23578999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-39 Score=319.55 Aligned_cols=267 Identities=30% Similarity=0.479 Sum_probs=212.5
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CC
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-RQ 168 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 168 (544)
..+.++|++.+.||.|+||.||+|.+..++..||+|++.+... .....+.+.+|+.+++.+. ||||+++++++.. ..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 83 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLE 83 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCC
Confidence 3467789999999999999999999999999999998865322 2334567789999999997 9999999998865 56
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
..+++|||+ +++|..++.. ..+++..+..++.|++.||.|||+.||+||||+|+|||+. ..+.++|+|||++...
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARIQ 158 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCCCEEeCcccccccc
Confidence 789999999 5688877653 4688889999999999999999999999999999999994 4567999999998765
Q ss_pred cCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh----------------
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK---------------- 310 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~---------------- 310 (544)
... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||...........+..
T Consensus 159 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 159 DPQ--MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred CCC--cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 332 234567889999998753 588999999999999999999999976554322211111
Q ss_pred --------CCccCCCC---cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcc
Q 009091 311 --------GGVDFESE---PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365 (544)
Q Consensus 311 --------~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~ 365 (544)
.......+ ....+++.+.++|.+||+.+|.+|||+++++.||||.....+...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~ 302 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPV 302 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccC
Confidence 00000000 11246789999999999999999999999999999988776655543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=310.55 Aligned_cols=245 Identities=22% Similarity=0.354 Sum_probs=204.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.++||+|+||.||+|.+. ++..||+|.+... ....+.+.+|+.+++++. |+||+++++++...+..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPG----TMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCC----chhHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEEE
Confidence 45999999999999999999865 5677999987432 223567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+++++|.+++... ..++...+..++.|++.||.|||+.+++||||||+||+++ .++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccceecCCC
Confidence 9999999999998753 4588889999999999999999999999999999999994 4557999999999876543
Q ss_pred Cce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
... ....++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+... ... +....++.++
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~ 233 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRM--PRMENCPDEL 233 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCC--CCCCCCCHHH
Confidence 221 2234567899999875 558889999999999999998 99999887777666666544 222 2223578999
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.++|.+||..+|++||+++++++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 234 YDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=310.37 Aligned_cols=243 Identities=25% Similarity=0.401 Sum_probs=206.9
Q ss_pred ceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 100 KELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
+.||+|+||.||+|.+... +..+++|.+..... ......+.+|+.+++.+. |+||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 4699999999999999866 88999998865432 224678899999999998 99999999999999999999999
Q ss_pred cCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 177 CSGGELFDKIIAQ---------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 177 ~~~~~L~~~l~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccccccc
Confidence 9999999999875 6799999999999999999999999999999999999994 446799999999987
Q ss_pred ccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 248 IDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 248 ~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... ......++..|+|||.+. ..++.++||||||+++|+|++ |..||...........+..+.. .. ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~ 231 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR-LP--KPEY 231 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CC--CCcc
Confidence 65432 223456788999999876 468999999999999999999 6999988877777777665322 12 2235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
++.++.+++.+||..||.+|||+.+++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 68999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=301.94 Aligned_cols=262 Identities=27% Similarity=0.441 Sum_probs=211.5
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-------
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE------- 165 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~------- 165 (544)
...|.-..+||+|.||+||+|+.+.+++.||+|++........ ......+|+.+|..|. |+|++.+++.|.
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG-fpitalreikiL~~lk-Henv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG-FPITALREIKILQLLK-HENVVNLIEICRTKATPTN 93 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC-CcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcc
Confidence 3457778899999999999999999999999987654332222 2344568999999997 999999888764
Q ss_pred -eCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 166 -DRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 166 -~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
+...+|+|+.+|+. +|..+|... -+++..++..++.+++.||.|+|+..|+|||+|+.|+|| +.++.+||+|||
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFG 169 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFG 169 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccc
Confidence 23469999999976 888888665 569999999999999999999999999999999999999 566789999999
Q ss_pred CcccccCC-----CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC
Q 009091 244 LSVFIDEG-----KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 244 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
+++.++.. +.+...+-|.+|++||.+. ..|+++.|||.-||++.||+||.+.+.+.++...+..|..-.....
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99765432 2234556799999999875 4599999999999999999999999999888776665533221122
Q ss_pred CCcccC-------------------------------CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 317 SEPWLL-------------------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 317 ~~~~~~-------------------------------~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
.+.|+. -.+++.+|+.++|..||.+|+++.++|+|.||.+.+.+
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 221111 14578899999999999999999999999999987654
|
|
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=317.40 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=203.8
Q ss_pred cccceecceecccCCeEEEEEEECC-------CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS-------TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.++|.+++.||+|+||.||+|.+.. +...+|+|.+.... .......+.+|+.+++++.+||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 4569999999999999999998643 23569999885432 23345678889999999966999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
..+..++||||+++++|.+++...+ .++...++.++.|++.||+|||++|++||||||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999999999997642 378889999999999999999999999999999999994
Q ss_pred cCCCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
.++.+||+|||++......... ....+++.|+|||++. ..++.++|+|||||++|+|++ |..||........
T Consensus 175 ---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 175 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred ---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 4457999999998765432211 1123456899999875 558999999999999999998 8899987776666
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
...+..... .. ....++.++.+||.+||..+|.+|||+.+++++
T Consensus 252 ~~~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 252 FKLLKEGHR-MD--KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHcCCC-CC--CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 665544322 11 223568899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=312.02 Aligned_cols=248 Identities=23% Similarity=0.326 Sum_probs=200.2
Q ss_pred ceecceecccCCeEEEEEEECCCCC--eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC------
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGN--SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR------ 167 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~------ 167 (544)
+.+++.||+|+||.||+|.+..++. .+|+|.+.... ......+.+.+|+.+++.++ |+||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCC
Confidence 3567899999999999999887765 58999875432 23445677889999999997 99999999987432
Q ss_pred CeEEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
...+++|||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++ .+..+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc---CCCCEEECC
Confidence 3578999999999999887432 3478999999999999999999999999999999999994 445799999
Q ss_pred cCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCC
Q 009091 242 FGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 242 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
||++......... ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||...........+..+... .
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~ 234 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL-K 234 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC-C
Confidence 9999876443221 1234667899999886 558999999999999999999 88999887777766666654321 1
Q ss_pred CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 317 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
. ...++..+.++|.+||+.||.+|||+.+++++
T Consensus 235 ~--~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 Q--PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred C--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 22578899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=317.72 Aligned_cols=250 Identities=22% Similarity=0.360 Sum_probs=203.3
Q ss_pred cccceecceecccCCeEEEEEEECC-------CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS-------TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.++|.+++.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++++.+||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 4569999999999999999998632 34568999875432 23345678899999999966999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
..+.+++||||+++++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT 168 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc
Confidence 999999999999999999999763 2378888999999999999999999999999999999995
Q ss_pred cCCCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
. ++.+||+|||+++........ ....++..|+|||++. +.++.++|||||||++|+|++ |..||......+.
T Consensus 169 ~---~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 245 (314)
T cd05099 169 E---DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245 (314)
T ss_pred C---CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 4 457999999999866432211 1123456799999875 558999999999999999999 8999988777777
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+..+.. .. ....++.++.++|.+||..||.+|||+.++++
T Consensus 246 ~~~~~~~~~-~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 246 FKLLREGHR-MD--KPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHcCCC-CC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 766654422 11 12356889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=324.80 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=208.7
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR- 167 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 167 (544)
...+..+|.+.+.||+|+||.||+|.+..++..||+|++.+.. ........+.+|+.+++++. ||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 87 (342)
T cd07879 10 VWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAV 87 (342)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-ccccchhHHHHHHHHHHhcC-CCCccchhheecccc
Confidence 4455678999999999999999999999999999999886532 22333456789999999997 99999999988654
Q ss_pred -----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 168 -----QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 168 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
..+++|+||+.. +|..++ ...+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~df 161 (342)
T cd07879 88 SGDEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDF 161 (342)
T ss_pred cCCCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeC
Confidence 356999999964 776654 34689999999999999999999999999999999999994 4567999999
Q ss_pred CCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC--------
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG-------- 312 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~-------- 312 (544)
|++...... .....|++.|+|||++.+ .++.++|||||||++|||++|+.||.+......+..+....
T Consensus 162 g~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07879 162 GLARHADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV 239 (342)
T ss_pred CCCcCCCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 998765332 234567889999998753 47889999999999999999999998766544443333210
Q ss_pred ---------------ccCCCCc----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 313 ---------------VDFESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 313 ---------------~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
...+... +...+..+.+||.+||+.||.+||++++++.||||......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 0000000 12457789999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=324.54 Aligned_cols=252 Identities=26% Similarity=0.377 Sum_probs=198.7
Q ss_pred cccceecceecccCCeEEEEEEE-----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 009091 93 RQFYTLGKELGRGQFGITYLCTE-----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED- 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 166 (544)
.++|++++.||+|+||+||+|.+ ..+++.||||++.... .......+.+|+.++.++.+||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 35799999999999999999984 3467889999885432 223346788999999999779999999998765
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC--------------------------------------------------------
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG-------------------------------------------------------- 190 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------------------------- 190 (544)
...+++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 456889999999999999886531
Q ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc---eec
Q 009091 191 -----------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRD 256 (544)
Q Consensus 191 -----------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~ 256 (544)
.++...+..++.|++.||.|||++||+||||||+|||+. .+..+||+|||++........ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCC
Confidence 256777889999999999999999999999999999994 445799999999876533211 112
Q ss_pred ccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHh
Q 009091 257 IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334 (544)
Q Consensus 257 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 334 (544)
..++..|+|||++. ..++.++||||||+++|+|++ |..||.....................+ ..+++++.+++..|
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~c 318 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYTTPEMYQTMLDC 318 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC--CCCCHHHHHHHHHH
Confidence 34567899999875 568999999999999999997 999997654433333333332222222 23678999999999
Q ss_pred cccCcCCCCChhhhhCC
Q 009091 335 LIQDPKKRITSAEVLEH 351 (544)
Q Consensus 335 l~~dp~~Rps~~ell~h 351 (544)
|+.||.+|||+.+|++|
T Consensus 319 l~~~p~~Rps~~eil~~ 335 (343)
T cd05103 319 WHGEPSQRPTFSELVEH 335 (343)
T ss_pred ccCChhhCcCHHHHHHH
Confidence 99999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=312.37 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=204.8
Q ss_pred cccceecceecccCCeEEEEEEECCC-----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST-----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++.+.||+|+||.||+|.+... +..||+|.+.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCC
Confidence 35699999999999999999998644 3789999874322 2233457889999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG----------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCCE
Confidence 99999999999999999986532 367788999999999999999999999999999999994 44579
Q ss_pred EEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCC
Q 009091 238 KATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~ 312 (544)
||+|||++........ .....++..|+|||.+. +.++.++|||||||++|||++ |..||...........+..+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence 9999999876543321 12345678899999875 568999999999999999998 999998877777766665432
Q ss_pred ccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
. ... ...++..+.++|.+||+.+|++|||+.++++
T Consensus 239 ~-~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 H-LDL--PENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred C-CCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 2 111 1246899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=333.23 Aligned_cols=258 Identities=27% Similarity=0.463 Sum_probs=216.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-----eC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-----DR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~ 167 (544)
.+.|.+.+.||.|.+|.||+++.+.+++..|+|+... .....+++..|.++++.+.+|||++.++++|. .+
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~----~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP----TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC----CccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 4558999999999999999999999999999998743 23455678889999999999999999999885 35
Q ss_pred CeEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 168 QSVHLVMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
+.+|||||||.|||.-++++. ..++.+..++.|++.++.|+.|||.+.++|||||-.|||++.+ +.|||+|||++
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e---~~VKLvDFGvS 170 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN---AEVKLVDFGVS 170 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc---CcEEEeeeeee
Confidence 789999999999999998876 3568999999999999999999999999999999999999554 56999999999
Q ss_pred ccccCCC-ceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC
Q 009091 246 VFIDEGK-VYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318 (544)
Q Consensus 246 ~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 318 (544)
..++... ...+.+|||.|||||++. ..|+.++|+||||++..||.-|.+|+........+-.|-++. +....
T Consensus 171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNP-PPkLk 249 (953)
T KOG0587|consen 171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-PPKLK 249 (953)
T ss_pred eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCC-Ccccc
Confidence 9887543 334679999999999984 237889999999999999999999997766544333332221 11122
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.+...+.++.+||..||.+|..+||+..++|+|||+++..
T Consensus 250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 2345688999999999999999999999999999999654
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=308.56 Aligned_cols=251 Identities=27% Similarity=0.473 Sum_probs=214.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.+. |+||+++++++......++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 38889999999999999999999999999999865432 2344567788999999998 999999999999999999999
Q ss_pred eccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 175 ELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 175 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. ...+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~---~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA---NDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec---CCcEEEeeccchhhhcc
Confidence 99999999998866 356899999999999999999999999999999999999965 45799999999987655
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
. ......|++.|+|||.+. ..++.++|+||||+++|+|++|..||...........+..+...... ..++.++++
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP---PIYSQDLQN 231 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---hhhCHHHHH
Confidence 4 333456889999999875 45788999999999999999999999887776666665554332221 257889999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCcc
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+|.+||..+|.+||++.++++||++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999984
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=320.13 Aligned_cols=256 Identities=27% Similarity=0.410 Sum_probs=203.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR----- 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----- 167 (544)
.++|++.+.||.|+||.||+|.+..++..+|+|++..... .......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-KDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC-CCCcchhHHHHHHHHHhcC-CCCccchhhheeccccccc
Confidence 4569999999999999999999999999999998865432 2222345678999999997 99999999877443
Q ss_pred ---CeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
..+++||||+.+ +|...+.. ...+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.++|+|||
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg 160 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFG 160 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCc
Confidence 357999999965 67776654 3579999999999999999999999999999999999999 445679999999
Q ss_pred CcccccCCCc------------eecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHH
Q 009091 244 LSVFIDEGKV------------YRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL 309 (544)
Q Consensus 244 ~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~ 309 (544)
++........ .....|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9976543211 122357888999998753 47899999999999999999999998777655544443
Q ss_pred hCCccCCCC--------------------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 310 KGGVDFESE--------------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 310 ~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
......... ....+++.+.++|.+||..||.+|||+.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 211100000 012345678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=315.79 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=205.1
Q ss_pred cccceecceecccCCeEEEEEEEC-------CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN-------STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.+.|.+++.||+|+||.||+|.+. .++..+|+|.+.... .......+.+|+.+++.+.+||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 456999999999999999999752 234579999875321 23445678899999999966999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
..+..++||||+++++|.+++.... .++...+..++.|++.||.|||++||+||||||+|||++
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 9999999999999999999997642 367788899999999999999999999999999999995
Q ss_pred cCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
.++.+||+|||++........ .....+++.|+|||++. ..++.++||||||+++|+|++ |..||.+.+..+.
T Consensus 172 ---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 172 ---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred ---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 445799999999987644221 11234567899999875 458999999999999999998 8889988777777
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
...+..+... .. ...++..+.+||.+||..+|.+|||+.++++.
T Consensus 249 ~~~~~~~~~~-~~--~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 249 FKLLKEGHRM-DK--PANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHcCCcC-CC--CCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 7766544321 11 23578999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=307.14 Aligned_cols=241 Identities=24% Similarity=0.324 Sum_probs=197.9
Q ss_pred ceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 100 KELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
++||+|+||.||+|.+..++ ..+|+|.+...... ...+.+.+|+.+++.+. |+||+++++++. ....++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876544 78999988654322 34567889999999997 999999999876 4568999999
Q ss_pred cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce-e
Q 009091 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-R 255 (544)
Q Consensus 177 ~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~-~ 255 (544)
+++++|.+++.....+++..+..++.|++.||.|||..|++||||||+|||++ .++.+||+|||++......... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeecCCcccc
Confidence 99999999998888899999999999999999999999999999999999994 4457999999999866433221 1
Q ss_pred ---cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 256 ---DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 256 ---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
...++..|+|||.+. ..++.++|||||||++|+|++ |..||...........+..... . +....++..++++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~l 230 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER-L--PRPEECPQEIYSI 230 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc-C--CCCCCCCHHHHHH
Confidence 112346799999875 558999999999999999998 9999987776666666554432 1 2223578999999
Q ss_pred HHHhcccCcCCCCChhhhhC
Q 009091 331 VRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~ 350 (544)
|.+||..||.+||++.++++
T Consensus 231 i~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 231 MLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=312.42 Aligned_cols=247 Identities=23% Similarity=0.382 Sum_probs=203.8
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
++|.+.++||+|+||.||+|... .++..+|+|.+... .......+.+|+++++.+. |+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCC
Confidence 45888999999999999999743 34667889977432 2345567899999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQG---------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
..+++|||+++++|.+++...+ .+++..+..++.|++.||.|||+.||+||||||+|||++ .
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---Q 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---C
Confidence 9999999999999999987643 478899999999999999999999999999999999995 4
Q ss_pred CccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 009091 234 GAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i 308 (544)
+..+||+|||++........ .....+++.|+|||++. ..++.++|||||||++|+|++ |..||...........+
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 45799999999876543221 12234567899999875 568999999999999999998 99999887777766666
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
..+... . ....+++.+.++|.+||+.||.+||++.++++
T Consensus 238 ~~~~~~-~--~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGREL-E--RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCccC-C--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 554322 1 12357899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=307.64 Aligned_cols=245 Identities=23% Similarity=0.395 Sum_probs=202.3
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+. ++..+|+|++.+.. .....+.+|+.+++.+. ||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA----MSEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC----CCHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEEE
Confidence 3888999999999999999876 46689999875432 23456788999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++....+...
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceecccccc
Confidence 999999999998764 4689999999999999999999999999999999999994 445799999999876543221
Q ss_pred ee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 254 YR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 254 ~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.. ...++..|+|||.+. ..++.++||||||+++|+|++ |..||......+....+..+ .....+ ..++..+.+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~ 232 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRLYRP--KLAPTEVYT 232 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcCCCC--CCCCHHHHH
Confidence 11 112345799999875 568899999999999999999 89999877776666665543 222222 347899999
Q ss_pred HHHHhcccCcCCCCChhhhhCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~h 351 (544)
++.+||..+|++|||+.++++.
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHH
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=311.00 Aligned_cols=247 Identities=23% Similarity=0.306 Sum_probs=200.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCC----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+.|++.+.||+|+||+||+|.+..++. .||+|++.... .......+.+|+.+++.+. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVG-SPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC-CC
Confidence 458899999999999999999877766 47889875432 3344567889999999997 9999999999875 45
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++++||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+.. +..+||+|||+++..
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~---~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS---PNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC---CCcEEECCCCceeec
Confidence 67999999999999999764 56899999999999999999999999999999999999954 346999999999876
Q ss_pred cCCCcee---cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 249 DEGKVYR---DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 249 ~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
....... ...++..|+|||.+. ..++.++|||||||++|||++ |..||...........+..+. ..+. ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~ 236 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RLPQ--PPIC 236 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cCCC--CccC
Confidence 5332211 123467899999875 568999999999999999998 899997766655555444432 2222 2357
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+.++|.+||..||++||++.+++.
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=307.33 Aligned_cols=246 Identities=22% Similarity=0.301 Sum_probs=203.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|++|.||+|.+. ++..||+|.+.... ...+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT----MDPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc----ccHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeee
Confidence 356999999999999999999975 45789999875432 23466889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||+++++|.+++.... .++...+..++.|++.||.|||+.||+||||||+||+++. ++.+||+|||++.....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE---NNICKVADFGLARVIKE 155 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC---CCCEEECCcceEEEccC
Confidence 999999999999997654 6899999999999999999999999999999999999954 45799999999987653
Q ss_pred CCce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.... ....++..|+|||++. ..++.++||||||+++|+|++ |+.||.+.........+... ...+. ...++..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~ 232 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMPC--PPGCPKE 232 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCC--CCcCCHH
Confidence 2211 1122345799999876 458899999999999999999 99999887776666665443 22222 2356899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.+++.+||+.+|.+||++.+++.
T Consensus 233 ~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 233 LYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHhhcCcccCCCHHHHHH
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=308.00 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=200.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
.+|++.++||+|+||.||+|.+..+ ..||+|++.... ...+.+.+|+++++++. ||||+++++.+. ....++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~----~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVS-EEPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc----cCHHHHHHHHHHHHhCC-CCCcceEEEEEC-CCCcEEE
Confidence 5699999999999999999988755 469999885422 23457889999999997 999999999875 4568999
Q ss_pred EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+||+++ .++.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeecccc
Confidence 9999999999999763 3478999999999999999999999999999999999995 4457999999999766543
Q ss_pred Cce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
... ....++..|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..+. ..+. ...++..+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~l 232 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPC--PPECPESL 232 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-CCCC--ccccCHHH
Confidence 221 1234667899999875 568999999999999999999 888998777766666654432 1111 23578899
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.++|.+||++||.+||++.++++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 233 HDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=314.05 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=207.5
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||+|++|.||+|.+..++..+++|.+..... .......+.+|+.+++++. |+||+++++++..+..+++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5677899999999999999998999999998855432 2234567888999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-c
Q 009091 176 LCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-V 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~ 253 (544)
|+++ +|.+.+... ..+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||.+....... .
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecCCCccc
Confidence 9975 888887763 5789999999999999999999999999999999999994 44579999999998765543 2
Q ss_pred eecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc-----------------
Q 009091 254 YRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD----------------- 314 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~----------------- 314 (544)
.....++..|+|||.+.+ .++.++|+||||+++|+|++|+.||...+..+.+..+......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 334568889999998753 5789999999999999999999999776655444333221000
Q ss_pred --CCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 315 --FES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 315 --~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
++. ..+..++.++.++|.+||.+||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 000 0112367899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=318.96 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=204.3
Q ss_pred ccccceecceecccCCeEEEEEEECCC-------CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENST-------GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
...+|++++.||+|+||.||+|.+... +..||+|.+... ......+.+.+|+.+++++.+||||+++++++
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 345699999999999999999986432 236899977532 22344567889999999996699999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceee
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLL 228 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill 228 (544)
...+.++++|||+++++|.+++.... .++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 99999999999999999999987532 36778889999999999999999999999999999999
Q ss_pred ecCCCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHH
Q 009091 229 SNKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303 (544)
Q Consensus 229 ~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~ 303 (544)
+. +..+||+|||+++........ ....++..|+|||++. ..++.++|||||||++|||++ |..||.+....+
T Consensus 168 ~~---~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 168 TE---DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred cC---CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 54 457999999999866442211 1223456799999875 568999999999999999998 889998877777
Q ss_pred HHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
....+...... .. ...++.++.++|.+||+.+|.+||++.+++++
T Consensus 245 ~~~~~~~~~~~-~~--~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 245 LFKLLKEGHRM-DK--PANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHcCCCC-CC--CCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 77666544221 11 22468899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=312.74 Aligned_cols=247 Identities=24% Similarity=0.341 Sum_probs=200.4
Q ss_pred cceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 95 FYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+.+++.+. ||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCC
Confidence 37888999999999999998753 23568888775432 2334567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCc
Q 009091 170 VHLVMELCSGGELFDKIIAQ------------------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~N 225 (544)
.+++|||+.+++|.+++... ..++...+..++.|++.||.|||+.||+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 99999999999999988642 247788999999999999999999999999999999
Q ss_pred eeeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCC
Q 009091 226 FLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAET 300 (544)
Q Consensus 226 ill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~ 300 (544)
||+.. +..+||+|||++........ .....++..|+|||.+. ..++.++||||||+++|+|++ |..||.+..
T Consensus 158 ill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVAE---GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEcC---CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99944 45799999999976533221 12234567899999875 458999999999999999998 999998777
Q ss_pred hHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 301 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...+...+... .... ....++.++.++|.+||+.||.+||++.++++
T Consensus 235 ~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTG-YRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCC-CCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 66666555433 2222 22357899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=309.17 Aligned_cols=246 Identities=20% Similarity=0.330 Sum_probs=206.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++.+.||.|+||.||+|.+.. +..+|+|++.... ......+.+|+.+++.++ |+||+++++++.....+++|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeEEE
Confidence 459999999999999999999987 8899999885432 334567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+++++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++ .+..+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcCCc
Confidence 9999999999999763 4589999999999999999999999999999999999994 4457999999999766432
Q ss_pred Cc-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 252 KV-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 252 ~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. .....++..|+|||++. ..++.++||||||+++|+|++ |..||........+..+..+ ...+. ...+++.+.
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ 234 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMPC--PAKCPQEIY 234 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCCC--CCCCCHHHH
Confidence 21 12234567899999875 568899999999999999998 89999887777777766643 22222 235789999
Q ss_pred HHHHHhcccCcCCCCChhhhhC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~ 350 (544)
++|.+||+.||.+|||+.++++
T Consensus 235 ~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 235 KIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=318.39 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=198.7
Q ss_pred eecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
.+++.+| ++|.||++++..++..||+|++.... ......+.+.+|+.+++.++ |+||+++++++...+..+++|||
T Consensus 5 ~i~~~~~--~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 5 LIGKCFE--DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred hhhHhhc--CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEec
Confidence 3444444 44556666777789999999986542 23445678999999999997 99999999999999999999999
Q ss_pred cCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 177 CSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 177 ~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
+++++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||++. ++.+||+|||.+.......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~---~~~~kl~d~~~~~~~~~~~~~ 157 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG---DGKVVLSGLRYSVSMIKHGKR 157 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec---CCceEEecCccceeecccccc
Confidence 9999999998763 45899999999999999999999999999999999999954 4579999999887553211
Q ss_pred ------ceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC--------
Q 009091 253 ------VYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF-------- 315 (544)
Q Consensus 253 ------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~-------- 315 (544)
......++..|+|||++.. .++.++|+|||||++|+|++|..||..............+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchh
Confidence 1123457788999999854 47899999999999999999999998765443322222211100
Q ss_pred ----------------------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 316 ----------------------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 316 ----------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.......++.++.+||.+||..||++|||+.++|+||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0000112346788999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=309.50 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=197.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCe----EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNS----YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+.|++.+.||+|+||+||+|.+..++.. +++|.+... ........+..|+..+.++. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLD-HAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCC-CCCcceEEEEECC-Cc
Confidence 4588899999999999999999877774 555654221 12233456778888999997 9999999998754 55
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++++||+++|+|.+++... +.+++..+..++.|++.||.|||+.|++||||||+|||++ .+..+||+|||++...
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEcCCccceec
Confidence 78999999999999999764 5689999999999999999999999999999999999994 4567999999999865
Q ss_pred cCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 249 DEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 249 ~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
.... ......++..|+|||.+. +.++.++|||||||++|||++ |..||.+.......+.+..+. .... ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~ 236 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGE-RLAQ--PQIC 236 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cCCC--CCCC
Confidence 4322 122345677899999875 568999999999999999998 999998776655544444332 2222 2246
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+.+++.+||..||.+|||+.++++
T Consensus 237 ~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 237 TIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 788999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=305.94 Aligned_cols=240 Identities=26% Similarity=0.355 Sum_probs=195.2
Q ss_pred eecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 101 ELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.++++++ ||||+++++++. ....++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 3899999999999765 445679999885432 2344567899999999997 999999999885 457899999999
Q ss_pred CCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce-e-
Q 009091 179 GGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-R- 255 (544)
Q Consensus 179 ~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~-~- 255 (544)
+++|.+++.. ...+++..++.++.|++.||.|||++|++||||||+|||++ .+..+||+|||++......... .
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCccceec
Confidence 9999999875 45689999999999999999999999999999999999994 4457999999999765432211 1
Q ss_pred --cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 256 --DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 256 --~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
...++..|+|||++. ..++.++|||||||++|+|++ |..||...........+..+... ..+ ..+++++.++|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~li 231 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL-DCP--AECPPEMYALM 231 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-CCC--CCCCHHHHHHH
Confidence 122356899999875 568899999999999999996 99999888777766666554322 222 35689999999
Q ss_pred HHhcccCcCCCCChhhhhC
Q 009091 332 RKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~ 350 (544)
.+||..||++||++.++.+
T Consensus 232 ~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 232 KDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHcCCChhhCcCHHHHHH
Confidence 9999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=286.68 Aligned_cols=254 Identities=28% Similarity=0.521 Sum_probs=208.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~ 170 (544)
.+.|++.+++|+|.|++||.|.+..+...++||++++ -..+.+.+|+.+|+.|++||||+++++...++ ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 4569999999999999999999999999999998843 34577899999999999999999999998764 457
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
.+|+||+.+.+...+ -..++...++.++.+|+.||+|||+.||+|||+||.|+||+... ..++|+|+|+|.....
T Consensus 111 aLiFE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~--rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhHhhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh--ceeeeeecchHhhcCC
Confidence 899999987655443 34578889999999999999999999999999999999997554 3699999999999988
Q ss_pred CCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHH-------------hCCcc
Q 009091 251 GKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAIL-------------KGGVD 314 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~-------------~~~~~ 314 (544)
+....-.+.+..|.-||++. ..|+.+-|+|||||+|..|+..+.||....+ .+.+-.|. +-...
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 88777788999999999885 4689999999999999999999999865432 22221111 10111
Q ss_pred CC-----------CCcc---------cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 315 FE-----------SEPW---------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 315 ~~-----------~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++ ..+| ..+++++.||+.++|..|..+|+||.|++.||||.-.
T Consensus 266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 00 1111 1357999999999999999999999999999999754
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=308.06 Aligned_cols=248 Identities=24% Similarity=0.409 Sum_probs=204.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCC---eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++++. ||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcc
Confidence 458999999999999999999865443 68999875432 2334567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+++++|.+++... ..++...+..++.|++.||.|||+.|++||||||+|||++ .+..++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCcccccc
Confidence 9999999999999999765 4589999999999999999999999999999999999994 44579999999998765
Q ss_pred CCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..... ....++..|+|||.+. ..++.++|+|||||++|++++ |..||......+....+..+ ...+ ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~ 234 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRLP--APMDC 234 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcCC--CCCCC
Confidence 43211 1122356799999886 568999999999999999886 99999887776666666554 2222 22356
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++.+.+++.+||+.+|.+||++.++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=314.01 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=199.2
Q ss_pred ccceecceecccCCeEEEEEEECCC--------------CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENST--------------GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~--------------~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~ 159 (544)
++|++.+.||+|+||.||+|++..+ ...||+|.+.... .......+.+|+++++++. |+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLK-NPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCcCe
Confidence 5699999999999999999987543 2358999875432 2334567889999999997 999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCChHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCcee
Q 009091 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQG------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227 (544)
Q Consensus 160 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nil 227 (544)
+++++...+..++||||+++++|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999886532 3678889999999999999999999999999999999
Q ss_pred eecCCCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh--CCCCCCCCCh
Q 009091 228 LSNKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS--GVPPFWAETE 301 (544)
Q Consensus 228 l~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t--g~~pf~~~~~ 301 (544)
++ .+..+||+|||++......... ....++..|+|||++. +.++.++|||||||++|+|++ +..||.....
T Consensus 162 l~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 162 VG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred Ec---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 95 3457999999998765432211 1234567899999875 568999999999999999988 6788877666
Q ss_pred HHHHHHHHh----CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 302 KGIFDAILK----GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 302 ~~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
......+.. ............+++.+.+||.+||+.||.+||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 555444322 1111111122346889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=308.67 Aligned_cols=247 Identities=23% Similarity=0.413 Sum_probs=204.1
Q ss_pred cceecceecccCCeEEEEEEECCCCC---eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
.|++.+.||+|+||.||+|.+..++. .||+|.+.... .......+..|+.+++.+. ||||+++++++...+..+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCceE
Confidence 48899999999999999999887665 59999875431 3444577899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+++++|.+++... +.++...++.++.|++.||.|||++|++||||||+||++ +.+..+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCcccccccc
Confidence 999999999999998763 568999999999999999999999999999999999999 4455799999999876543
Q ss_pred CCcee---ccc---CCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 251 GKVYR---DIV---GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 251 ~~~~~---~~~---gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... ... ++..|+|||.+. ..++.++|||||||++|||++ |..||...........+... ... +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~--~~~~~ 235 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRL--PPPMD 235 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcC--CCccc
Confidence 22111 111 245799999886 568999999999999999886 99999887777666666433 222 22235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++..+.+++.+||..+|.+||++.+++.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 7889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=311.66 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=204.0
Q ss_pred ccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.+|++.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-HPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCC
Confidence 458999999999999999998753 57789999875432 2334567889999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCce
Q 009091 169 SVHLVMELCSGGELFDKIIAQG----------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENF 226 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~----------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Ni 226 (544)
..++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999997532 367888999999999999999999999999999999
Q ss_pred eeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCh
Q 009091 227 LLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETE 301 (544)
Q Consensus 227 ll~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~ 301 (544)
|++ .++.++|+|||++........ .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+...
T Consensus 162 l~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 162 LVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred Eec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 994 455799999999876543221 11234566799999875 568999999999999999998 8889988777
Q ss_pred HHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 302 KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 302 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+....+..+.... . ...++.++.+||.+||+.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~-~--~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 239 EEVIYYVRDGNVLS-C--PDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHhcCCCCC-C--CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 77776665544321 1 1246889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=304.23 Aligned_cols=242 Identities=25% Similarity=0.357 Sum_probs=204.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++.+.||.|+||.||+|... ++.||+|.+.... ...+.+.+|+.+++.+. |+||+++++++...+..++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDS----TAAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccch----hHHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEE
Confidence 35888999999999999999865 7899999885432 14567889999999997 99999999999989999999
Q ss_pred EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccccccccc
Confidence 99999999999998765 689999999999999999999999999999999999994 4457999999999876432
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.. ...++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+. .... ...+++.+.+
T Consensus 156 ~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 230 (256)
T cd05039 156 QD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-RMEA--PEGCPPEVYK 230 (256)
T ss_pred cc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-CCCC--ccCCCHHHHH
Confidence 22 234456799999875 568889999999999999997 999998877766666554432 2111 2346899999
Q ss_pred HHHHhcccCcCCCCChhhhhC
Q 009091 330 LVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~ 350 (544)
+|.+||..+|.+|||+.++++
T Consensus 231 li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 231 VMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=309.38 Aligned_cols=252 Identities=27% Similarity=0.472 Sum_probs=206.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc--ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV--NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+|.+.+.||+|+||.||++.+..++..+++|++...... .......+..|+.++++++ ||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 488999999999999999999887777777766443221 1223345668999999997 9999999999998899999
Q ss_pred EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 173 VMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||+|+||++.. ..++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~----~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN----NLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec----CCEeecccCceeec
Confidence 9999999999988864 356899999999999999999999999999999999999953 25999999998765
Q ss_pred cCC-CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 249 DEG-KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 249 ~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .......|++.|+|||.+. ..++.++|+||||+++|+|++|..||...........+..+..... ...++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL---PETYSRQ 232 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC---cchhcHH
Confidence 432 2223456889999999875 4578899999999999999999999977666555555544322211 2356889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+.++|.+||..||.+||++.++++||||
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=305.77 Aligned_cols=248 Identities=23% Similarity=0.380 Sum_probs=204.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCC---eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
..|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.+++++. |+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCc
Confidence 458888999999999999999876655 68999874321 2334567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+++++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||+++ .+..+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccceecc
Confidence 9999999999999998764 5689999999999999999999999999999999999994 45579999999987664
Q ss_pred CCCce--e--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKVY--R--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~~--~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..... . ....+..|+|||++. ..++.++|||||||++|||++ |..||...........+.... . .+....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~--~~~~~~~ 235 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-R--LPAPMDC 235 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-C--CCCCCCC
Confidence 32211 1 112345799999875 568899999999999999997 999998887777776665432 2 2222357
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+.+++.+||..+|.+||++.++++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=311.93 Aligned_cols=253 Identities=28% Similarity=0.485 Sum_probs=207.5
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|++.+.||+|++|.||+|.+..++..+|+|++.... ......+.+.+|+.+++++. |+||+++++++...+.+++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 567788999999999999999999999999986543 22334466778999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-c
Q 009091 176 LCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-V 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~ 253 (544)
|++ ++|.+++... ..+++..+..++.|++.||.|||+.||+||||+|+||++.. ++.++|+|||++....... .
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~---~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC---CCCEEEecCCcccccCCCccc
Confidence 997 5999999876 57999999999999999999999999999999999999944 5679999999988764432 2
Q ss_pred eecccCCccccCccccc-c-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc------------------
Q 009091 254 YRDIVGSAYYVAPEVLR-R-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV------------------ 313 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~------------------ 313 (544)
.....++..|+|||.+. . .++.++|+|||||++|+|++|..||......+.+..+.....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 23345678899999875 3 588999999999999999999999987765554444322100
Q ss_pred cCCC-------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 314 DFES-------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 314 ~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
.++. .....++..+.++|.+||..||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0000 0112347789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=311.27 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=209.1
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
..++...+.++||+|.||.|.+|.-.. +..||||.+.... ....+..|.+|+++|.+|+ ||||++++++|..++.+
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA--TKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPL 610 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCccc--chhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCch
Confidence 345667889999999999999998653 6899999886544 2344678999999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 171 HLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
++|+||+++|+|.+++.++.. +.......|+.||+.|++||.+.++|||||.++|+|+ ++++++||+|||+++.+
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCccccccc
Confidence 999999999999999988733 3455667799999999999999999999999999999 78889999999999987
Q ss_pred cCCCcee---cccCCccccCcccc-cccCCCcchHHHHHHHHHHHhh--CCCCCCCCChHHHHHHHHh---CCc-cCCCC
Q 009091 249 DEGKVYR---DIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLS--GVPPFWAETEKGIFDAILK---GGV-DFESE 318 (544)
Q Consensus 249 ~~~~~~~---~~~gt~~y~aPE~~-~~~~~~~~DiwslG~~l~el~t--g~~pf~~~~~~~~~~~i~~---~~~-~~~~~ 318 (544)
..++.+. ..+-..+|||||.+ .+.++.++|+|+||+++||+++ ...||...+++...++... ... ..-..
T Consensus 688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~ 767 (807)
T KOG1094|consen 688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLS 767 (807)
T ss_pred ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceecc
Confidence 7665443 23456799999965 6899999999999999999765 7899998888777766432 111 11111
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
....++..+.++|.+||..|..+||+++++.
T Consensus 768 ~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 768 RPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred CCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 2235788999999999999999999999983
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=308.74 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=191.2
Q ss_pred ceecccCCeEEEEEEECCCCC-------eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 100 KELGRGQFGITYLCTENSTGN-------SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~-------~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+.||+|+||.||+|.+...+. .+|+|.+... .....+.+.+|+.+++.+. ||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEE
Confidence 369999999999999865443 3777776332 2234467788999999997 9999999999999899999
Q ss_pred EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-----CccEEEeecCCcc
Q 009091 173 VMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-----GAMLKATDFGLSV 246 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~-----~~~vkl~Dfg~a~ 246 (544)
||||+++|+|..++...+ .+++..+..++.||+.||+|||+.||+||||||+|||++.++. ...++++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999997654 5899999999999999999999999999999999999975432 1348999999987
Q ss_pred cccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCC-CCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGV-PPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..... ....++..|+|||++.+ .++.++|||||||++|+|++|. .||........ ..+......++. ..
T Consensus 157 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~----~~ 228 (258)
T cd05078 157 TVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYEDRHQLPA----PK 228 (258)
T ss_pred ccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHHccccCCC----CC
Confidence 65432 23568889999999864 4788999999999999999995 55544433332 223333333222 34
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+.++.++|.+||+.||.+|||++++++.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 6789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=303.90 Aligned_cols=244 Identities=24% Similarity=0.357 Sum_probs=200.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+.... ...+.+.+|+.+++++. |+||+++++++. ....++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~----~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGT----MSPESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCC----CCHHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCcEE
Confidence 456999999999999999999876 56679999885432 23457889999999997 999999999875 456889
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++. +..++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~---~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD---GLVCKIADFGLARLIED 154 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC---CceEEeCCceeeeeccC
Confidence 99999999999998763 35899999999999999999999999999999999999954 45799999999976543
Q ss_pred CCce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.... ....++..|+|||.+. ..++.++||||||+++|+|++ |..||.+....+....+..+ ...+ .....+..
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~ 231 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMP--CPQDCPIS 231 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCC--CCCcCCHH
Confidence 2211 1234566799999875 568899999999999999999 89999887776666666543 2222 22356889
Q ss_pred HHHHHHHhcccCcCCCCChhhhh
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell 349 (544)
+.+|+.+||.+||.+|||+++++
T Consensus 232 ~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 232 LHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHH
Confidence 99999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=304.05 Aligned_cols=242 Identities=26% Similarity=0.399 Sum_probs=200.8
Q ss_pred ceecccCCeEEEEEEECC-CCC--eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 100 KELGRGQFGITYLCTENS-TGN--SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~-~~~--~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
+.||+|++|.||+|.+.. .+. .||+|.+...... ...+.+.+|+.++++++ ||||+++++.+.. ..+++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999999865 333 5899988654432 45678899999999997 9999999999988 899999999
Q ss_pred cCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc-
Q 009091 177 CSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV- 253 (544)
Q Consensus 177 ~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~- 253 (544)
+++++|.+++.... .+++..++.++.|++.||.|||++|++||||||+||+++. ++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~---~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS---DDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec---CCEEEeccccccccccccccc
Confidence 99999999998754 6899999999999999999999999999999999999954 45799999999987644211
Q ss_pred ---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 254 ---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 254 ---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.....++..|+|||.+. ..++.++|||||||++|+|++ |..||...........+.........+ ..++..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 231 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERP--EACPQDIY 231 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCC--ccCCHHHH
Confidence 11245678899999886 468999999999999999998 999998877777666665433222222 24688999
Q ss_pred HHHHHhcccCcCCCCChhhhhC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~ 350 (544)
+++.+||..+|++||++.++++
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=310.74 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=198.8
Q ss_pred cccceecceecccCCeEEEEEEECC----------------CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS----------------TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~ 156 (544)
.++|++.+.||+|+||.||+|.+.. ++..+|+|++.... .......+.+|+.+++.++ |+|
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~-~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLK-DPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCC
Confidence 3569999999999999999986432 34468999875432 2344567889999999997 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCc
Q 009091 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-----------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225 (544)
Q Consensus 157 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~N 225 (544)
|+++++++...+..++||||+++++|.+++.... .++...+..++.|++.||.|||+.||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 9999999999999999999999999999987642 35677899999999999999999999999999999
Q ss_pred eeeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCcccc-cccCCCcchHHHHHHHHHHHhh--CCCCCCCC
Q 009091 226 FLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLS--GVPPFWAE 299 (544)
Q Consensus 226 ill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~~l~el~t--g~~pf~~~ 299 (544)
||++ .++.++|+|||++........ .....++..|++||+. .+.++.++|||||||++|||++ |..||...
T Consensus 161 ili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 161 CLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9995 445799999999986543221 1123446789999975 4678999999999999999998 77899776
Q ss_pred ChHHHHHHHHh----CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 300 TEKGIFDAILK----GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 300 ~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
........... .......+....+++.+.+||.+||+.||.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 65554433211 1111111222346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=308.48 Aligned_cols=247 Identities=26% Similarity=0.381 Sum_probs=193.9
Q ss_pred cceecceecccCCeEEEEEE----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CC
Q 009091 95 FYTLGKELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQ 168 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~ 168 (544)
+|++.+.||+|+||+||++. ...++..||+|.+.... .......+.+|+.++++++ ||||+++++++.. ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGGK 81 (283)
T ss_pred hceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCc
Confidence 34899999999999998865 34567889999885432 2234567889999999997 9999999998765 34
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+++||||+++++|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++ .+..+||+|||++...
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAV 157 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeeccccccc
Confidence 689999999999999988664 599999999999999999999999999999999999994 4457999999999876
Q ss_pred cCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH--HH------------HHHHH
Q 009091 249 DEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK--GI------------FDAIL 309 (544)
Q Consensus 249 ~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~--~~------------~~~i~ 309 (544)
..... .....++..|+|||.+. ..++.++||||||+++|+|++|..||...... .. .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 54321 11234566799999875 56899999999999999999999998643221 00 01111
Q ss_pred hCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
......+ ....++.++.+++.+||+.||++|||++++++
T Consensus 238 ~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 238 ERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 1111111 12346889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=304.92 Aligned_cols=244 Identities=24% Similarity=0.343 Sum_probs=190.9
Q ss_pred ceecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 100 KELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.++++++ ||||+++++++.....+++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 36899999999999864 345678999875432 2233457888999999997 999999999999989999999999
Q ss_pred CCCChHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 178 SGGELFDKIIAQG-----HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 178 ~~~~L~~~l~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
++|+|.+++.... ..+...+..++.|++.||.|||+.|++||||||+||+++ .+..+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcc
Confidence 9999999987532 356677889999999999999999999999999999994 44579999999987544322
Q ss_pred ce---ecccCCccccCcccccc--------cCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhC-CccCCCCc
Q 009091 253 VY---RDIVGSAYYVAPEVLRR--------SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG-GVDFESEP 319 (544)
Q Consensus 253 ~~---~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~ 319 (544)
.. ....|+..|+|||++.+ .++.++||||||+++|||++ |..||............... ....+.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 11 23457888999998752 25789999999999999996 99999776655544333222 22222221
Q ss_pred c-cCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 320 W-LLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 320 ~-~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
. ...++.+.+++..|| .+|.+|||+++|+.
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1 235788999999999 68999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=302.99 Aligned_cols=244 Identities=23% Similarity=0.344 Sum_probs=199.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|.+.+.||+|++|.||+|.+..+ ..+|+|.+.... ...+.+.+|+.+++++. |+||+++++++. .+..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLR-HDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCC-CCCeeeEEEEEc-CCCcEEE
Confidence 5699999999999999999987654 468999874322 23467889999999997 999999998875 4567899
Q ss_pred EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+++++|.+++.... .++...+..++.|++.||.|||+.||+|+||||+||++ +.++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCC
Confidence 99999999999997643 47889999999999999999999999999999999999 44567999999999766433
Q ss_pred Cce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
... ....++..|+|||.+. ..++.++||||||+++|+|++ |..||.+.........+..+ ...+ .....+..+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~ 232 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRMP--CPQGCPESL 232 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC--CCcccCHHH
Confidence 211 1234567899999875 568899999999999999999 89999887777666665543 2222 123578899
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+++.+||.+||.+||+++++++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=303.47 Aligned_cols=245 Identities=22% Similarity=0.330 Sum_probs=202.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.++||+|+||.||+|... ++..||+|.+.... .....+.+|+.+++++. |+||+++++++. .+.+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS----MSPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC----CcHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCcEE
Confidence 456999999999999999999865 57889999885432 23467889999999997 999999999874 467899
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+|||+++++|.+++... ..++...+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcceeecCC
Confidence 99999999999988763 3588999999999999999999999999999999999994 445799999999976653
Q ss_pred CCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .....++..|+|||++. ..++.++||||||+++|+|++ |+.||.+.........+..+ ...+ ....++.+
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~ 231 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-YRMP--RPDNCPEE 231 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-CCCC--CCCCCCHH
Confidence 221 12234567899999885 558899999999999999999 99999887776666665443 2222 22356889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.++|.+||..+|++||++++++.
T Consensus 232 ~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 232 LYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHHHccCChhhCCCHHHHHH
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=302.56 Aligned_cols=245 Identities=27% Similarity=0.420 Sum_probs=205.8
Q ss_pred eecceecccCCeEEEEEEECCCC----CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 97 TLGKELGRGQFGITYLCTENSTG----NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
++.+.||.|+||.||+|.+..++ ..+|+|++.... .......+.+|+.+++.+. |+||+++++++...+..++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEE
Confidence 56788999999999999998766 889999885432 1225678889999999995 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+|||+++++|.+++..... +++..+..++.|++.||.+||+.|++|+||||+||+++ ....++|+|||++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCceeccc
Confidence 9999999999999976544 99999999999999999999999999999999999994 445799999999987654
Q ss_pred CCcee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKVYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
..... ...+++.|+|||.+. ..++.++||||||+++|+|++ |..||...........+........ ...++..
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPPE 232 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHH
Confidence 42222 123678999999885 558999999999999999998 7888887777777776665543222 2247899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.+++.+||..||.+|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999999999875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=327.66 Aligned_cols=201 Identities=33% Similarity=0.555 Sum_probs=179.4
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC------e
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ------S 169 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~------~ 169 (544)
|...+.||+||||.||+++++.+|+.||||.+.+.. ....++..-+|+++|++|. |+|||+++++-+... .
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCccccc
Confidence 566788999999999999999999999999986543 4556788899999999998 999999999865443 4
Q ss_pred EEEEEeccCCCChHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC-CCccEEEeecCCc
Q 009091 170 VHLVMELCSGGELFDKIIA---QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLS 245 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~-~~~~vkl~Dfg~a 245 (544)
..+|||||.||+|+..+.+ ...+++.+++.+...+..||.|||++||+||||||.||++.... +...-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 6799999999999999976 34699999999999999999999999999999999999996533 4567899999999
Q ss_pred ccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAE 299 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~ 299 (544)
+.++++....+.+||+.|++||++. +.|+..+|.|||||++|+++||..||...
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 9999988888999999999999986 67999999999999999999999999654
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-38 Score=305.73 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=203.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCC----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++++. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVD-HPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEec-Cc
Confidence 458999999999999999999876665 58888775432 2344567889999999997 9999999999887 78
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||+. .+..+||+|||++...
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCcccccc
Confidence 89999999999999998774 4689999999999999999999999999999999999994 4457999999999876
Q ss_pred cCCCceec---ccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 249 DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 249 ~~~~~~~~---~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
........ ..++..|+|||.+. ..++.++|+||||+++||+++ |..||......+....+..+.. .+.+ ...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~ 236 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-LPQP--PIC 236 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-CCCC--CCC
Confidence 53322111 22356799999875 568899999999999999998 9999988877776666654422 2222 246
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+.+++.+||..||++||++.++++
T Consensus 237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 237 TIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=302.13 Aligned_cols=241 Identities=23% Similarity=0.338 Sum_probs=198.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCeEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-DRQSVHL 172 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~l 172 (544)
+.|++.+.||+|+||.||++... +..+|+|.+.. ....+.+.+|+.+++++. |+||+++++++. ..+..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKN-----DATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCC-----CchHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEE
Confidence 35889999999999999999765 77899998742 223467889999999997 999999999764 5567899
Q ss_pred EEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCccceeccc
Confidence 999999999999987654 378999999999999999999999999999999999995 445799999999876543
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ....++..|+|||++. ..++.++|||||||++|+|++ |+.||...........+..+.. ......+++.+.
T Consensus 155 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (256)
T cd05082 155 TQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVVY 229 (256)
T ss_pred cC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHHH
Confidence 22 2334567899999876 458899999999999999997 9999987776666666544321 122235789999
Q ss_pred HHHHHhcccCcCCCCChhhhhC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~ 350 (544)
++|.+||..+|.+|||+.++++
T Consensus 230 ~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 230 DVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=305.59 Aligned_cols=250 Identities=22% Similarity=0.389 Sum_probs=205.6
Q ss_pred ccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.|++.+.||.|+||.||+|+.+. +...+++|.+.... .....+.+.+|+.++++++ |+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCC
Confidence 458899999999999999999754 34578888764321 2224567899999999997 999999999999989
Q ss_pred eEEEEEeccCCCChHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 169 SVHLVMELCSGGELFDKIIAQG---------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
..++||||+++++|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++. ++.++|
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~---~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS---QREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC---CCcEEE
Confidence 9999999999999999998765 6899999999999999999999999999999999999954 457999
Q ss_pred eecCCcccccCCC--ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccC
Q 009091 240 TDFGLSVFIDEGK--VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 240 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
+|||++....... ......++..|+|||.+. ..++.++||||||+++|+|++ |..||...........+..+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9999987543221 122345677899999875 557889999999999999998 888997776666666655444333
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.. ...++..+.++|.+||..||.+||++.+++.+
T Consensus 239 ~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 PV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 22 23578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=301.47 Aligned_cols=245 Identities=23% Similarity=0.350 Sum_probs=204.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|.+.+.||+|+||.||+|.+. ++..+|+|.+.... ...+.+.+|+.+++++. |+||+++++++......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT----MSPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc----cCHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceEE
Confidence 456999999999999999999976 45789999885432 34567889999999997 9999999999998899999
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||+++++|.+++... ..++...+..++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++.....
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceeccc
Confidence 99999999999999764 3689999999999999999999999999999999999994 445799999999876643
Q ss_pred CCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .....++..|+|||.+. ..++.++|+||||+++|+|++ |+.||.+.........+..+. ..+. ....+.+
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~ 232 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-RMPR--PPNCPEE 232 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCC--CCCCCHH
Confidence 211 11223456899999876 458899999999999999998 999998877777777665542 2222 1245889
Q ss_pred HHHHHHHhcccCcCCCCChhhhh
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell 349 (544)
+.+++.+||+.+|.+||++++++
T Consensus 233 ~~~~i~~~l~~~p~~Rp~~~~l~ 255 (261)
T cd05034 233 LYDLMLQCWDKDPEERPTFEYLQ 255 (261)
T ss_pred HHHHHHHHcccCcccCCCHHHHH
Confidence 99999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=303.65 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=190.1
Q ss_pred ceecccCCeEEEEEEECC--CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 100 KELGRGQFGITYLCTENS--TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+. |+||+++++.+.....+++||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeC
Confidence 359999999999996532 34467888664321 2334456789999999997 999999999999999999999999
Q ss_pred CCCChHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 178 SGGELFDKIIAQGH-----YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 178 ~~~~L~~~l~~~~~-----~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
++|+|.+++..... .++..+..++.||+.||.|||++||+||||||+|||++ .+..+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEeccccccccccch
Confidence 99999999976432 46778899999999999999999999999999999994 45579999999987543321
Q ss_pred c---eecccCCccccCccccc--------ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCC-ccCCCCc
Q 009091 253 V---YRDIVGSAYYVAPEVLR--------RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG-VDFESEP 319 (544)
Q Consensus 253 ~---~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~-~~~~~~~ 319 (544)
. .....++..|+|||++. ..++.++|||||||++|||++ |..||........+..+.... ...+.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 1 12234567899999863 246789999999999999999 788887776666555544332 2222221
Q ss_pred -ccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 320 -WLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 320 -~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...++..+.+++..|| .||.+|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 2256788999999999 59999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=305.31 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=202.9
Q ss_pred cccceecceecccCCeEEEEEEECC----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-C
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-R 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~ 167 (544)
.++|.+.+.||+|+||.||+|.+.. ++..|++|.+... ........+.+|+.+++++. |+||+++++++.. .
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCC
Confidence 3569999999999999999999875 3578899987432 23444677889999999996 9999999998765 5
Q ss_pred CeEEEEEeccCCCChHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ--------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
...++++||+++++|.+++... ..+++..+..++.|++.||.|||+++++||||||+||+++ .+..+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEE
Confidence 6789999999999999998763 3588999999999999999999999999999999999994 4457999
Q ss_pred eecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCcc
Q 009091 240 TDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVD 314 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~ 314 (544)
+|||+++.+...... ....++..|+|||++. ..++.++|||||||++|++++ |+.||...........+..+ ..
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~ 237 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-YR 237 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-CC
Confidence 999999865432211 1234567899999875 458999999999999999999 99999877665555444433 22
Q ss_pred CCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
... ...+++++.+++.+||..||++|||+.++++
T Consensus 238 ~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 LAQ--PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CCC--CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 222 2356899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=308.61 Aligned_cols=263 Identities=29% Similarity=0.441 Sum_probs=219.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChh----cHHHHHHHHHHHHhccCCCCeeEEEEEEE-
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ----DREDIKREIQIMQHLSGQQNIVEFRGAYE- 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~----~~~~~~~E~~~l~~l~~h~~iv~~~~~~~- 165 (544)
.+.++|-++.+||+|||+.||+|.+....+.||||+-...+..... ..+..-+|..+.+.|. ||.||++|++|.
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDyfsl 538 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDYFSL 538 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeeeeee
Confidence 3467899999999999999999999999999999987544433222 2344568999999997 999999999996
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--CCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM--GVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~--~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
+.+.+|-|+|||+|.+|.-+|+..+.+++.+++.|+.||+.||.||.+. .|||-||||.||||.+.+..+.|||+|||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 5567999999999999999999999999999999999999999999864 79999999999999888888999999999
Q ss_pred CcccccCCCc--------eecccCCccccCccccc-c----cCCCcchHHHHHHHHHHHhhCCCCCCCCC-hHHHHH--H
Q 009091 244 LSVFIDEGKV--------YRDIVGSAYYVAPEVLR-R----SYGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFD--A 307 (544)
Q Consensus 244 ~a~~~~~~~~--------~~~~~gt~~y~aPE~~~-~----~~~~~~DiwslG~~l~el~tg~~pf~~~~-~~~~~~--~ 307 (544)
+++.+..... .....||.+|++||.+. + ..+.++||||+||++|.++.|+.||...- ...+++ .
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 9998764322 23457999999999873 2 36899999999999999999999997553 333332 2
Q ss_pred HHh-CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 308 ILK-GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 308 i~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
|++ ....|+. -+.++.++++||++||++--.+|....+|-.||||.-
T Consensus 699 IlkAtEVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 699 ILKATEVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhcceeccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 332 2334443 3468999999999999999999999999999999964
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=300.48 Aligned_cols=228 Identities=23% Similarity=0.346 Sum_probs=187.1
Q ss_pred cCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCChHH
Q 009091 105 GQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD 184 (544)
Q Consensus 105 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 184 (544)
|.+|.||+|++..+++.+|+|++.+.. ...+|...+.... ||||+++++++...+..++||||++|++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999999999999999985532 1223444444444 8999999999999999999999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCcccc
Q 009091 185 KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264 (544)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~ 264 (544)
++.....+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||.+...... .....++..|+
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhccccc--cccCCcCcccc
Confidence 998877899999999999999999999999999999999999994 4457999999987665442 22345677899
Q ss_pred Cccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCC
Q 009091 265 APEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI 343 (544)
Q Consensus 265 aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 343 (544)
|||.+. ..++.++|+||+|+++|+|++|..||....... ........+ ..+++.++++|.+||+.||.+||
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------NTHTTLNIP--EWVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------ccccccCCc--ccCCHHHHHHHHHHccCCHHHhc
Confidence 999886 458899999999999999999998875432210 111111111 24788999999999999999999
Q ss_pred Ch-----hhhhCCCcc
Q 009091 344 TS-----AEVLEHPWM 354 (544)
Q Consensus 344 s~-----~ell~hp~f 354 (544)
++ +++++||||
T Consensus 222 ~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 222 GAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCCccchHHHHcCCCC
Confidence 96 999999998
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=302.06 Aligned_cols=144 Identities=23% Similarity=0.358 Sum_probs=122.0
Q ss_pred CccccCCCccccc-ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCC-----
Q 009091 81 PETVLGKPLEDIR-QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ----- 154 (544)
Q Consensus 81 ~~~~~~~~~~~~~-~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h----- 154 (544)
.++.+-+-.+.+. .+|.+.++||.|.|++||+|++..+.+.||+|+.+. .....+....||.+|++++.+
T Consensus 64 GGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS----AqhYtEaAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 64 GGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS----AQHYTEAALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred CCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh----hhHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3444444555666 899999999999999999999999999999998742 244566778999999998733
Q ss_pred --CCeeEEEEEEEe----CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCc
Q 009091 155 --QNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPEN 225 (544)
Q Consensus 155 --~~iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~N 225 (544)
..||+|++.|.. +.++|||+|++ |.+|..+|... +.++...++.|++|||.||.|||. .||||.||||+|
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN 218 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN 218 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence 369999999974 56899999999 78999999874 569999999999999999999996 599999999999
Q ss_pred eeee
Q 009091 226 FLLS 229 (544)
Q Consensus 226 ill~ 229 (544)
||+.
T Consensus 219 vLl~ 222 (590)
T KOG1290|consen 219 VLLC 222 (590)
T ss_pred eeee
Confidence 9984
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=298.17 Aligned_cols=241 Identities=25% Similarity=0.355 Sum_probs=197.3
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.||+|+||.||+|... ++..+|+|.+.... .......+.+|+.+++.+. ||||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCC
Confidence 36899999999999865 68899999875432 2333456889999999997 99999999999999999999999999
Q ss_pred CChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce--ec
Q 009091 180 GELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY--RD 256 (544)
Q Consensus 180 ~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~ 256 (544)
++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......... ..
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccceeccccccccCCC
Confidence 9999988764 4578999999999999999999999999999999999994 4457999999998765432211 11
Q ss_pred ccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHh
Q 009091 257 IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334 (544)
Q Consensus 257 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 334 (544)
..++..|+|||++. +.++.++||||||+++|+|++ |..||...........+..+. ... ....++..+.+++.+|
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~ 230 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-RMS--CPQKCPDDVYKVMQRC 230 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-CCC--CCCCCCHHHHHHHHHH
Confidence 23456799999876 558899999999999999998 999998776666655554432 111 1234789999999999
Q ss_pred cccCcCCCCChhhhhC
Q 009091 335 LIQDPKKRITSAEVLE 350 (544)
Q Consensus 335 l~~dp~~Rps~~ell~ 350 (544)
|..+|++||++.++++
T Consensus 231 l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 231 WDYKPENRPKFSELQK 246 (250)
T ss_pred cccCcccCCCHHHHHH
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=305.39 Aligned_cols=239 Identities=16% Similarity=0.180 Sum_probs=189.6
Q ss_pred eecccCCeEEEEEEECCC------------------------CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC
Q 009091 101 ELGRGQFGITYLCTENST------------------------GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~~~------------------------~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~ 156 (544)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.+++.+. |||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~-h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVS-HIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCC-CCC
Confidence 599999999999875321 2357888774321 233456788999999997 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC---
Q 009091 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--- 232 (544)
Q Consensus 157 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--- 232 (544)
|+++++++......++||||+++++|..++.. .+.+++..+..++.|++.||.|||++||+||||||+|||++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999988875 45689999999999999999999999999999999999996432
Q ss_pred -CCccEEEeecCCcccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHh-hCCCCCCCCChHHHHHHH
Q 009091 233 -GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILL-SGVPPFWAETEKGIFDAI 308 (544)
Q Consensus 233 -~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~-tg~~pf~~~~~~~~~~~i 308 (544)
....+|++|||++...... ....++..|+|||.+. ..++.++|||||||++|||+ +|..||...........
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~- 233 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF- 233 (274)
T ss_pred CccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-
Confidence 2235899999988654322 2235788899999885 35789999999999999984 79999987655443332
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.......+. ..++.+.++|.+||+.+|.+|||+.++|++
T Consensus 234 ~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 234 YEKKHRLPE----PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHhccCCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 222222221 246789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=298.60 Aligned_cols=241 Identities=24% Similarity=0.357 Sum_probs=198.5
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
++||.|+||.||+|.+.. ++.||+|.+..... ......+.+|+.+++++. |+||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 469999999999999887 99999998854332 234567889999999997 99999999999999999999999999
Q ss_pred CChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce---e
Q 009091 180 GELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY---R 255 (544)
Q Consensus 180 ~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---~ 255 (544)
++|.+++... ..++...+..++.+++.||.|||+++++||||||+|||++ .+..+||+|||++......... .
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeeccccccccCCcceeccc
Confidence 9999998763 4688999999999999999999999999999999999994 4457999999999765432211 1
Q ss_pred cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 256 DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 256 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
...++..|+|||.+. +.++.++|+|||||++|+|++ |..||...........+... .... ....++..+.++|.+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~ 230 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRMP--APQLCPEEIYRLMLQ 230 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCCC--CCccCCHHHHHHHHH
Confidence 123356799999875 568999999999999999999 88898777665555554432 2221 223568899999999
Q ss_pred hcccCcCCCCChhhhhC
Q 009091 334 MLIQDPKKRITSAEVLE 350 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~ 350 (544)
||..+|.+|||+.++++
T Consensus 231 ~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 231 CWAYDPENRPSFSEIYN 247 (251)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=299.18 Aligned_cols=245 Identities=27% Similarity=0.446 Sum_probs=203.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+|+++++++. ||||+++++++......++||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA----MSEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC----CCHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEEE
Confidence 4888999999999999999876 46789999875322 23456889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++++|.+++... +.+++..++.++.|++.||.|||+.|++||||||+||+++ .+..+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCcc
Confidence 999999999998764 4589999999999999999999999999999999999994 445799999999876543221
Q ss_pred --eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 254 --YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 254 --~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.....++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+..... + ...+..+.+
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 232 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK-P--RLASQSVYE 232 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC-C--CCCCHHHHH
Confidence 11223567899999876 568899999999999999998 9999988777777777655432221 1 236889999
Q ss_pred HHHHhcccCcCCCCChhhhhCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~h 351 (544)
|+.+||..+|.+|||+.+++++
T Consensus 233 l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 233 LMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHcccChhhCCCHHHHHHh
Confidence 9999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=305.82 Aligned_cols=249 Identities=27% Similarity=0.407 Sum_probs=197.1
Q ss_pred ccceecceecccCCeEEEEEEE----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 009091 94 QFYTLGKELGRGQFGITYLCTE----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR-- 167 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 167 (544)
+.|++.+.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++++. ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCC
Confidence 4578999999999999999974 4568889999875332 2344567899999999997 99999999998765
Q ss_pred CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
...++||||++|++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||++.
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~---~~~~~l~dfg~~~ 157 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTK 157 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC---CCCEEECCCcccc
Confidence 5689999999999999998764 35899999999999999999999999999999999999954 4579999999998
Q ss_pred cccCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---------------HHHHH
Q 009091 247 FIDEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE---------------KGIFD 306 (544)
Q Consensus 247 ~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~---------------~~~~~ 306 (544)
....... .....|+..|+|||++. ..++.++|||||||++|+|+++..|+..... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 6643321 12345677899999875 5688999999999999999998776532111 11111
Q ss_pred HHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 307 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.+ ...... +.+..++..+.+||.+||+.||.+|||+.+++++
T Consensus 238 ~~-~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 238 VL-EEGKRL--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HH-HcCccC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 11 111111 2233578999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=301.93 Aligned_cols=251 Identities=25% Similarity=0.430 Sum_probs=206.3
Q ss_pred ceecceecccCCeEEEEEEECC-CCCeEEEEEEeeccc-------cChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 96 YTLGKELGRGQFGITYLCTENS-TGNSYACKSILKRKL-------VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
|++.+.||+|+||.||+|.+.. ++..+|+|.+..... ........+.+|+.++.+.-+||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 7888999999999999999887 678899998854321 12233455778898887644599999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 168 QSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
+..++||||++|++|.+++.. ...+++..++.++.|++.||.|||+ .||+|+||+|+|||+. .++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEecc
Confidence 999999999999999988743 3468999999999999999999996 7899999999999994 4457999999
Q ss_pred CCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
|.+.............|+..|+|||.+. +.++.++|+||||+++|+|++|..||...........+....... ....
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 236 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP--LPEG 236 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc--CCcc
Confidence 9998766554444567899999999876 458899999999999999999999998776666565555443321 1222
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.+++.+.++|.+||+.||.+||++.++..+
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 468899999999999999999999998653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=303.57 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=194.9
Q ss_pred ccceecceecccCCeEEEEEEE----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 009091 94 QFYTLGKELGRGQFGITYLCTE----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--R 167 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~ 167 (544)
+.|++.+.||+|+||.||+|.. ..++..||+|.+... .......+.+|+++++.+. ||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCC
Confidence 4588999999999999999873 457889999987532 2344567889999999997 9999999998753 3
Q ss_pred CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
..+++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---SENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---CCCeEEECCCcccc
Confidence 5689999999999999998764 4589999999999999999999999999999999999994 44579999999998
Q ss_pred cccCCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH---------------HHH
Q 009091 247 FIDEGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG---------------IFD 306 (544)
Q Consensus 247 ~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~---------------~~~ 306 (544)
........ ....++..|+|||++. ..++.++|||||||++|||++|..|+......- .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 76443211 1122345699999876 458899999999999999999887764332110 011
Q ss_pred HHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 307 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+......++ ....++..+.+||.+||..+|++|||+.++++
T Consensus 237 ~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 237 ELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1222222222 22357889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=300.94 Aligned_cols=240 Identities=18% Similarity=0.222 Sum_probs=189.4
Q ss_pred ceecccCCeEEEEEEECCC------------CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 100 KELGRGQFGITYLCTENST------------GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~------------~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
+.||+|+||.||+|..... ...+++|.+... .......+.+|+.+++.+. ||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVS-HKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 3689999999999985422 235788876432 2333456788999999997 99999999999998
Q ss_pred CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC----CccEEEeec
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG----GAMLKATDF 242 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~----~~~vkl~Df 242 (544)
...++||||+++++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||+...+. ...++++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999998888754 56899999999999999999999999999999999999964331 124899999
Q ss_pred CCcccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHh-hCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILL-SGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~-tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
|++...... ....|+..|+|||++. ..++.++|||||||++|+|+ +|..||......+.. .+.........
T Consensus 157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~~-- 230 (262)
T cd05077 157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCMLVT-- 230 (262)
T ss_pred CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccCCC--
Confidence 998755332 2346888999999875 45889999999999999997 588888765443332 22233222211
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..++++.+||.+||+.||.+||++.+|+++
T Consensus 231 --~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 231 --PSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred --CChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 246789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=301.59 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=201.3
Q ss_pred ccceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
..|.+.+.||+|+||.||+|.+... ...||+|.+.... .....+.+.+|+.+++++. ||||+++++++.+ +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFD-HPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-CCc
Confidence 4588999999999999999987644 4568889774321 2344567889999999997 9999999998875 557
Q ss_pred EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+++++|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||++. ...+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~---~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS---PDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec---CCCeEEccCceeeecc
Confidence 89999999999999997644 5899999999999999999999999999999999999954 4579999999988665
Q ss_pred CCCcee--cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGKVYR--DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
...... ...++..|+|||.+. ..++.++||||||+++|+|++ |..||......+....+..+... . ....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 235 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-P--MPPNCPP 235 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC-C--CCCCCCH
Confidence 432221 223456799999875 568899999999999999986 99999887776666555544322 1 2235789
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.+.++|.+||..+|.+|||+.+++..
T Consensus 236 ~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 236 TLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=314.38 Aligned_cols=247 Identities=26% Similarity=0.433 Sum_probs=207.1
Q ss_pred cccceecceecccCCeEEEEEEECCC----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+....+.+.||.|-||.||+|....- .-.||||..+... .....+.|..|.-+|+.++ ||||++++|+|.+ .
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfd-HphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFD-HPHIIKLIGVCVE-Q 463 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCC-Ccchhheeeeeec-c
Confidence 44456678899999999999986432 3358888775433 3455788999999999998 9999999999975 6
Q ss_pred eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..|||||+++.|.|..+|..+ ..++......++.||+.||.|||+.+.|||||-.+|||++..+ .|||+|||+++.
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~---CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ---CVKLADFGLSRY 540 (974)
T ss_pred ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc---eeeecccchhhh
Confidence 789999999999999999875 4589999999999999999999999999999999999997655 699999999999
Q ss_pred ccCCCceecccC--CccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 248 IDEGKVYRDIVG--SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 248 ~~~~~~~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
+.+...+....| ..-|||||.++ ..++.++|||.|||.+||++. |..||.+....+.+-.+.+|. .++.| +++
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe-RlP~P--~nC 617 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE-RLPCP--PNC 617 (974)
T ss_pred ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC-CCCCC--CCC
Confidence 887666544444 34699999987 679999999999999999887 999999988777665555543 33443 378
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
++.+..|+.+||+++|.+||++.+|.
T Consensus 618 Pp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 618 PPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ChHHHHHHHHHhccCcccCCcHHHHH
Confidence 99999999999999999999997763
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=315.12 Aligned_cols=257 Identities=29% Similarity=0.487 Sum_probs=214.2
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|..++.||-|+||+|.++....|...||.|.+.+............+.|-.||..-. .+-||+||..|.+++.+|+||+
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEEe
Confidence 667788999999999999999999999999987766666666778889999999886 8899999999999999999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-----
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE----- 250 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~----- 250 (544)
|++||++-.+|.+-+-++|..++.++.+|..|+++.|..|+|||||||+|||| +.+++|||+|||++.-+..
T Consensus 710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999 6777999999999764311
Q ss_pred ----CCce----------------------------------ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh
Q 009091 251 ----GKVY----------------------------------RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS 291 (544)
Q Consensus 251 ----~~~~----------------------------------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t 291 (544)
++.. ...+||+.|+|||++. ..|+..+|+||.|||||||+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 0000 0247999999999985 679999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC---hhhhhCCCccccC
Q 009091 292 GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT---SAEVLEHPWMREG 357 (544)
Q Consensus 292 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 357 (544)
|+.||...+..+....+..=.-.+..++...++.++.++|.++.. ++..|.- ++++-.||||+.-
T Consensus 867 g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI 934 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI 934 (1034)
T ss_pred CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc
Confidence 999998877655444433222223334445789999999987554 4666663 5679999999753
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=298.29 Aligned_cols=245 Identities=22% Similarity=0.353 Sum_probs=200.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||++.+. .+..+|+|.+... ....+.+.+|+.+++++. |+||+++++.+.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeEE
Confidence 466999999999999999999865 4567999977432 233567889999999997 9999999999877 77899
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+|||+++++|.+++... ..++...+..++.|++.||.|||+.|++||||||+||+++ ..+.+||+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeeccC
Confidence 99999999999999763 3478888999999999999999999999999999999994 456899999999876543
Q ss_pred CCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .....++..|+|||++. +.++.++|+|||||++|++++ |..||...........+..+ ...+ .....+.+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~ 231 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP--RPENCPEE 231 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCCC--CcccCCHH
Confidence 221 11234567799999886 458889999999999999998 99999887776666655443 2222 22357889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.+++.+||+.+|.+||++.++++
T Consensus 232 ~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 232 LYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHH
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=302.72 Aligned_cols=245 Identities=27% Similarity=0.399 Sum_probs=197.8
Q ss_pred ceecccCCeEEEEEEECCCC------CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 100 KELGRGQFGITYLCTENSTG------NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.||+|+||.||+|.+.... ..+|+|.+.+.. .......+.+|+.+++.+. ||||+++++++...+..++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEE
Confidence 36999999999999976443 679999875432 2234567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC--CCccEEEeecCC
Q 009091 174 MELCSGGELFDKIIAQ-------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--GGAMLKATDFGL 244 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--~~~~vkl~Dfg~ 244 (544)
|||+++++|.+++... ..++...+..++.|++.||.|||+.+++|+||||+||+++..+ ....++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999998652 2377889999999999999999999999999999999996543 234799999999
Q ss_pred cccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 245 SVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 245 a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
+........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+..+. .+ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~--~~ 234 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG-RL--QK 234 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-cc--CC
Confidence 876543221 11234567899999875 568999999999999999998 999998776666555554332 11 12
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...++..+.++|.+||.++|.+||++.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2357899999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=299.34 Aligned_cols=242 Identities=23% Similarity=0.291 Sum_probs=190.8
Q ss_pred ceecccCCeEEEEEEECC---CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCeEEEEEe
Q 009091 100 KELGRGQFGITYLCTENS---TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-DRQSVHLVME 175 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e 175 (544)
+.||+|+||.||+|.+.. ....+|+|.+... ......+.+.+|+.+++.++ ||||+++++++. .++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEe
Confidence 468999999999998653 3457999987432 22344567889999999997 999999999765 4566899999
Q ss_pred ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc-
Q 009091 176 LCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV- 253 (544)
Q Consensus 176 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~- 253 (544)
|+.+++|.+++... ..++...+..++.|++.||.|||+.+|+||||||+|||++ .++.+||+|||++........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCccccccccCCcce
Confidence 99999999998764 3467788889999999999999999999999999999994 445799999999876543211
Q ss_pred ----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 254 ----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSG-VPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 254 ----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.....++..|+|||.+. ..++.++|||||||++|||++| ..||...........+..+... .. ...+++.+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 231 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL-LQ--PEYCPDPL 231 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-CC--CCcCCHHH
Confidence 11234577899999875 5688999999999999999995 5666665555555555443221 11 12468899
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+++.+||..+|++||++.++++
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=326.99 Aligned_cols=341 Identities=20% Similarity=0.276 Sum_probs=215.3
Q ss_pred cccceecceecccCCeEEEEEEECCC----CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEE-----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST----GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA----- 163 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~----- 163 (544)
.+.|.+.+.||+|+||.||+|++..+ +..||+|++.... ..+....| .+++.. +.++..++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~~-~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRAC-PNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhhc-hhhHHHHHHhhhccc
Confidence 45699999999999999999999988 8999999874321 11111111 111111 2222221111
Q ss_pred -EEeCCeEEEEEeccCCCChHHHHHHcCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCCEeecCC
Q 009091 164 -YEDRQSVHLVMELCSGGELFDKIIAQGH--------------------YTEKAAAALCRAIVNVVHHCHFMGVMHRDLK 222 (544)
Q Consensus 164 -~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------~~~~~~~~~~~ql~~~l~~lH~~~ivHrDik 222 (544)
......++|||||+.+++|.+++..... .....+..++.||+.||.|||++||+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 2456689999999999999998865421 1234567899999999999999999999999
Q ss_pred CCceeeecCCCCccEEEeecCCcccccCC--CceecccCCccccCcccccc-----------------------cCCCcc
Q 009091 223 PENFLLSNKDGGAMLKATDFGLSVFIDEG--KVYRDIVGSAYYVAPEVLRR-----------------------SYGKEI 277 (544)
Q Consensus 223 p~Nill~~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-----------------------~~~~~~ 277 (544)
|+|||++.+ .+.+||+|||+|...... ......+|++.|+|||.+.. .++.++
T Consensus 283 P~NILl~~~--~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 283 PQNIIFSEG--SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHHEEEeCC--CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999542 347999999999865432 22245689999999996521 133466
Q ss_pred hHHHHHHHHHHHhhCCCCCCCCChHHHHHHH-HhCCccC----------CCC-------cccCCCHHHHHHHHHhcccCc
Q 009091 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAI-LKGGVDF----------ESE-------PWLLISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 278 DiwslG~~l~el~tg~~pf~~~~~~~~~~~i-~~~~~~~----------~~~-------~~~~~~~~~~~li~~~l~~dp 339 (544)
|||||||+||||+++..|+... ...+... ....... ..+ ..........+||.+||++||
T Consensus 361 DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 9999999999999987665322 1111111 1111000 000 001123346699999999999
Q ss_pred CCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCH
Q 009091 340 KKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITY 419 (544)
Q Consensus 340 ~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~ 419 (544)
.+|||+.++|+||||.......-... +.+...+ ...... ...+-.+.+...+..-..+.+|-.+.
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~~~~~~~-~~~~~~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~e 503 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGLLGLSVM-QNLRLQL--FRATQQ------------DYGEAAAWVVFLMAKSGTEKEGGFTE 503 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCccccccc-ccccccc--chhhHH------------HHHHHHHHHHHHHHhcCCCCCCCccH
Confidence 99999999999999987543211111 1100000 000000 00011122334444556677888898
Q ss_pred HHHHHHHHHhCCCCCHHHHH--HHHHhcCCCCCceeeehhhhhhh
Q 009091 420 EELKTGLARLGSKLSETEVK--QLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 420 ~e~~~~l~~~~~~~~~~~~~--~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
.++......-.. ...+.. .+....+-+..|..++.+++...
T Consensus 504 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (566)
T PLN03225 504 AQLQELREKEPK--KKGSAQRNALASALRLQRKGVKTVARTVDEI 546 (566)
T ss_pred HHHHHhhhhcCc--chhhhhhhhHHHHHhhhhhhhhhhhhhhhcc
Confidence 888876555322 222232 36677777788888888887544
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=300.39 Aligned_cols=237 Identities=19% Similarity=0.220 Sum_probs=189.8
Q ss_pred ceecccCCeEEEEEEECCCC----------CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 100 KELGRGQFGITYLCTENSTG----------NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~----------~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+.||+|+||.||+|.+..++ ..+++|.+.... .....+.+|+.+++.+. ||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCC-CcchhheeeEEec-CC
Confidence 46999999999999998766 347777664322 11577889999999997 9999999999887 77
Q ss_pred EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC----CCccEEEeecCC
Q 009091 170 VHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD----GGAMLKATDFGL 244 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~----~~~~vkl~Dfg~ 244 (544)
.++||||+++++|.+++.... .++...+..++.||+.||.|||+.||+||||||+|||++..+ ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999998765 789999999999999999999999999999999999996543 123699999999
Q ss_pred cccccCCCceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
+..... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||............. .....+.+
T Consensus 155 a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~-- 228 (259)
T cd05037 155 PITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMP-- 228 (259)
T ss_pred cccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCC--
Confidence 986544 223457788999999864 48899999999999999999 577786654333332222 11111111
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
....+.++|.+||..+|.+|||+.++++
T Consensus 229 --~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 229 --DCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred --CchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 2378999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=297.96 Aligned_cols=240 Identities=27% Similarity=0.382 Sum_probs=198.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||.||++. .++..+|+|.+... ...+.+.+|+.+++++. ||||+++++++... ..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-----VTAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-----chHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-CcEEE
Confidence 458999999999999999986 46788999987432 23457889999999997 99999999998764 47899
Q ss_pred EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+++++|.+++.... .++...+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceecccc
Confidence 99999999999997643 478999999999999999999999999999999999994 4457999999998764332
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
......+..|+|||.+. +.++.++|+|||||++|+|++ |..||......+....+..+. ... +...+++.+.+
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~ 228 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-RME--PPEGCPADVYV 228 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC-CCC--CCCcCCHHHHH
Confidence 12234467899999875 568899999999999999997 999998877766666655442 222 22357899999
Q ss_pred HHHHhcccCcCCCCChhhhhC
Q 009091 330 LVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~ 350 (544)
+|.+||+.+|.+||++++++.
T Consensus 229 li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 229 LMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=309.96 Aligned_cols=260 Identities=27% Similarity=0.428 Sum_probs=215.8
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC-----CCCeeEEEEE
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG-----QQNIVEFRGA 163 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----h~~iv~~~~~ 163 (544)
.+.+..+|.+..-.|+|-||+|..|.+...|..||||+|.... ...+.=+.|+++|++|.. --|+++++..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 4556778888889999999999999999999999999996543 233344689999999962 3479999999
Q ss_pred EEeCCeEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 164 YEDRQSVHLVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 164 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
|...+++|||+|.+. .+|.++|+..+. +....++.++.||..||..|-..||+|.||||.|||++. ....+|||
T Consensus 503 F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE--~k~iLKLC 579 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE--SKNILKLC 579 (752)
T ss_pred hhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc--Ccceeeec
Confidence 999999999999994 599999988654 888999999999999999999999999999999999964 33589999
Q ss_pred ecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
|||.|....++.. ..+.-+..|.|||++. -+|+...|+||.||+||||+||+..|.+.+...++..++.....++..-
T Consensus 580 DfGSA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Km 658 (752)
T KOG0670|consen 580 DFGSASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKM 658 (752)
T ss_pred cCccccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHH
Confidence 9999998877544 4556678999999875 5799999999999999999999999999998888766654332222110
Q ss_pred c-------------------------------------------------cCCC-------HHHHHHHHHhcccCcCCCC
Q 009091 320 W-------------------------------------------------LLIS-------DSAKDLVRKMLIQDPKKRI 343 (544)
Q Consensus 320 ~-------------------------------------------------~~~~-------~~~~~li~~~l~~dp~~Rp 343 (544)
. ..++ ..+++|+..||..||++|.
T Consensus 659 lRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRi 738 (752)
T KOG0670|consen 659 LRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRI 738 (752)
T ss_pred hhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcC
Confidence 0 0011 2588999999999999999
Q ss_pred ChhhhhCCCcccc
Q 009091 344 TSAEVLEHPWMRE 356 (544)
Q Consensus 344 s~~ell~hp~f~~ 356 (544)
|..++|.||||++
T Consensus 739 t~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 739 TVNQALKHPFITE 751 (752)
T ss_pred CHHHHhcCCcccC
Confidence 9999999999975
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=316.37 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=213.5
Q ss_pred cceecceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++.++||+|.||.|++|.+..-+ ..||||.+..... ......|.+|+.+|.+|+ |+|++++||+..+ ....
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l--~~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL--NAIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc--chhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chhh
Confidence 3667889999999999999886433 3689998865443 236788999999999998 9999999999877 7788
Q ss_pred EEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 172 LVMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
||||++++|+|.+.|++ +..|....+..++.||+.|+.||..++.|||||-.+|+||.. ...|||+|||+.+.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas---prtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS---PRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---cceeeeecccceeccC
Confidence 99999999999999987 345888999999999999999999999999999999999954 3479999999999887
Q ss_pred CCCceeccc----CCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKVYRDIV----GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~~~~~~----gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
.+....... -...|+|||.++ ..++.++|+|++||+||||++ |..||.+.....+++.|-. +-.++.+ ..+
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~-~erLpRP--k~c 340 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA-GERLPRP--KYC 340 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc-cccCCCC--CCC
Confidence 654333222 234699999997 679999999999999999999 7899999999999988874 3444444 368
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+++++++++.||.++|.+|||+..|.+.-+..+.
T Consensus 341 sedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 9999999999999999999999999776666554
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=304.68 Aligned_cols=248 Identities=22% Similarity=0.306 Sum_probs=198.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCC----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGN----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..|+..+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMD-HPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCC-C
Confidence 457888999999999999999887776 46777664321 2233446789999999997 99999999998654 4
Q ss_pred EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+.. +..+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~---~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS---PNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC---CCceEEccccccccc
Confidence 679999999999999987654 5899999999999999999999999999999999999943 456999999999866
Q ss_pred cCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 249 DEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 249 ~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..... .....++..|+|||.+. ..++.++|||||||++|||++ |..||.+.........+..+ ..++.+ ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~ 236 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-ERLPQP--PIC 236 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCCCC--CCC
Confidence 43221 11234567899999875 568899999999999999997 89999876655544444333 222222 346
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+..+.+++..||..+|++||+++++++.
T Consensus 237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 237 TIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 7899999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=296.65 Aligned_cols=243 Identities=21% Similarity=0.316 Sum_probs=188.9
Q ss_pred eecccCCeEEEEEEECCCC--CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 101 ELGRGQFGITYLCTENSTG--NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
.||+|+||.||++.....+ ..+++|.+.... .....+.+.+|+.+++.+. ||||+++++.+......++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCC
Confidence 5999999999999754332 345566553322 2334567889999999997 9999999999999999999999999
Q ss_pred CCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 179 GGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 179 ~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
+|+|.+++... ...+...+..++.||+.||.|||+.+|+||||||+|||++ .++.+||+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecccccccccCcchhh
Confidence 99999998763 2356778889999999999999999999999999999994 45679999999986432211
Q ss_pred -ceecccCCccccCcccccc--------cCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCC-ccCCCCc-c
Q 009091 253 -VYRDIVGSAYYVAPEVLRR--------SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG-VDFESEP-W 320 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~-~~~~~~~-~ 320 (544)
......|+..|+|||++.. .++.++|||||||++|||++ |..||......+.+..+..+. .....+. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 1224568899999998742 35788999999999999997 567887777666666554432 2222221 2
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
..+++.+.+++..|| .+|.+||+++++++
T Consensus 236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 236 LPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 246889999999999 68999999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=302.14 Aligned_cols=248 Identities=14% Similarity=0.147 Sum_probs=183.9
Q ss_pred cccceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcH--------HHHHHHHHHHHhccCCCCeeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDR--------EDIKREIQIMQHLSGQQNIVEFR 161 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~--------~~~~~E~~~l~~l~~h~~iv~~~ 161 (544)
..+|++.+.||+|+||+||+|.+..+ +..+|+|+............ .....+...+..+. |+||++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~~ 89 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID-HLGIPKYY 89 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC-CCCCCcEE
Confidence 46799999999999999999998877 66677775432211000000 01122333344555 99999999
Q ss_pred EEEEeCC----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 162 GAYEDRQ----SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 162 ~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
+++.... ..++++|++. .++.+.+......++..++.++.|++.||.|||+.+|+||||||+|||++ ....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~~~~~ 165 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---GNNRG 165 (294)
T ss_pred EeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCcE
Confidence 8765433 4578888874 47777776665678899999999999999999999999999999999994 44579
Q ss_pred EEeecCCcccccCCC--------ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HH---
Q 009091 238 KATDFGLSVFIDEGK--------VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GI--- 304 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~--- 304 (544)
+|+|||+|+...... ......||+.|+|||++. ..++.++|||||||++|||++|..||.+.... ..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 999999998653211 112346999999999876 45899999999999999999999999876332 21
Q ss_pred -----HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 -----FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 -----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...+..+... ...+++.+.+++..||..+|.+||++.+|++
T Consensus 246 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 246 AKCDFIKRLHEGKIK-----IKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred hHHHHHHHhhhhhhc-----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1222222221 2245789999999999999999999999864
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=296.81 Aligned_cols=247 Identities=21% Similarity=0.312 Sum_probs=197.3
Q ss_pred ceecceecccCCeEEEEEEEC---CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 009091 96 YTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ---- 168 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 168 (544)
|.+.+.||+|+||.||+|.+. .++..+|+|++.... ......+.+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCc
Confidence 567889999999999999864 357889999885433 23334567889999999997 999999999886432
Q ss_pred --eEEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 169 --SVHLVMELCSGGELFDKIIAQ------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 169 --~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
..++++||+.+|+|..++... ..++...++.++.|++.||.|||+.||+||||||+||+++ .+..+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEEC
Confidence 347899999999998887532 2478899999999999999999999999999999999994 44579999
Q ss_pred ecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccC
Q 009091 241 DFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 241 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
|||++........ .....+++.|++||.+. ..++.++|||||||++|+|++ |..||...........+......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 234 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL- 234 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 9999886643221 11234567899999875 457889999999999999999 88999877666666655544321
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
..+ ...+..+.+++.+||+.+|.+||++.+++.
T Consensus 235 ~~~--~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 235 KQP--PDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred CCC--CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111 246789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=299.16 Aligned_cols=249 Identities=29% Similarity=0.443 Sum_probs=198.6
Q ss_pred ccceecceecccCCeEEEEEEEC----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--R 167 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~ 167 (544)
+.|++.+.||+|+||.||+|... .++..+|+|++..... ......+.+|+.+++.+. |+||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE--EQHRSDFEREIEILRTLD-HENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc--hHHHHHHHHHHHHHHhCC-CCChheEEeeeecCCC
Confidence 45788899999999999999864 3478999998864332 134678899999999997 9999999999877 5
Q ss_pred CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
...++||||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||||+||+++ .+..++|+|||++.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEccccccc
Confidence 67999999999999999997754 589999999999999999999999999999999999994 44679999999998
Q ss_pred cccCCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH--------------HHHH
Q 009091 247 FIDEGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG--------------IFDA 307 (544)
Q Consensus 247 ~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~--------------~~~~ 307 (544)
........ ....++..|+|||.+. ..++.++||||||+++|+|++|..||....... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76532211 1224456799999875 568899999999999999999999986543211 1122
Q ss_pred HHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 308 ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 308 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
........+. ...++.++.+++.+||..+|.+|||+.++++
T Consensus 238 ~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 2222222222 2346789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=317.36 Aligned_cols=248 Identities=24% Similarity=0.441 Sum_probs=214.5
Q ss_pred cceecceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
...+.+.||.|.||+||+++.+..| ..||||.++... .+..+..|+.|+.||-+++ ||||++|.|+......++
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeE
Confidence 4578889999999999999987655 469999885443 3455678999999999998 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||+|||++|+|..+|+.+ +.++.-++..+++.|+.|+.||.+.++|||||..+|||+ +.+..+|++|||+++.+.+
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeeccc
Confidence 999999999999999875 569999999999999999999999999999999999999 6778999999999998765
Q ss_pred CC--ceecccC--CccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 251 GK--VYRDIVG--SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 251 ~~--~~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.. .+.+.-| ..+|.|||.+. ..++.++||||+||+|||.++ |..|||..+..+.++.|..+ +.+ |+...+|
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRL--PpPmDCP 860 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRL--PPPMDCP 860 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCC--CCCCCCc
Confidence 43 1222222 36899999986 789999999999999999776 99999999999999998765 443 3445789
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..+..|+..||++|-.+||.+.+|+.+
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 999999999999999999999998753
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=304.47 Aligned_cols=242 Identities=22% Similarity=0.380 Sum_probs=207.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
......+||-|.||.||.+.++...-.||||.++. .....++|+.|..+|+.+. |||+|+++|+|..+..+|||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE----DtMeveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh----cchhHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEE
Confidence 34556789999999999999999888999998743 2356789999999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 175 ELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||.+|+|.++|+...+ ++.-.+.+++.||..|++||..+++|||||-.+|+|+ +.+..||++|||+++.+....
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcCCc
Confidence 99999999999998654 7778889999999999999999999999999999999 556689999999999876543
Q ss_pred ceecccC---CccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 253 VYRDIVG---SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 253 ~~~~~~g---t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
+....| ...|.|||-+. +.++.++|||+|||+|||+.| |-.||.+......+..+ ...+....+ ..+++.+
T Consensus 420 -YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL-EkgyRM~~P--eGCPpkV 495 (1157)
T KOG4278|consen 420 -YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL-EKGYRMDGP--EGCPPKV 495 (1157)
T ss_pred -eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH-hccccccCC--CCCCHHH
Confidence 333344 35699999886 669999999999999999999 77788777666655554 444555444 4789999
Q ss_pred HHHHHHhcccCcCCCCChhhh
Q 009091 328 KDLVRKMLIQDPKKRITSAEV 348 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~el 348 (544)
.+|++.||++.|.+||+++|+
T Consensus 496 YeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 496 YELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred HHHHHHHhcCCcccCccHHHH
Confidence 999999999999999999997
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=313.03 Aligned_cols=250 Identities=31% Similarity=0.490 Sum_probs=198.5
Q ss_pred ceecceecccCCeE-EEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 96 YTLGKELGRGQFGI-TYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 96 y~~~~~lg~G~~g~-Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
|.-.+.+|.|+.|+ ||+|... ++.||||++.. ...+...+|+..|+.-+.|||||++++.-.+.+..||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC--CceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44557799998886 6899855 88999998843 334567799999999999999999999988999999999
Q ss_pred eccCCCChHHHHHHcC-C---CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC--CCCccEEEeecCCcccc
Q 009091 175 ELCSGGELFDKIIAQG-H---YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK--DGGAMLKATDFGLSVFI 248 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~-~---~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~--~~~~~vkl~Dfg~a~~~ 248 (544)
|+|. .+|.+++...+ . ......+.+..|+++||+|||+.+||||||||.||||+.. +....++|+|||+++..
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9995 59999998741 1 1113457889999999999999999999999999999864 34468999999999988
Q ss_pred cCCCc----eecccCCccccCccccccc-CCCcchHHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGKV----YRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSG-VPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~~l~el~tg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..+.. ..+..||.+|+|||++... -+.++|||||||++|+.++| ..||...... ..+|+.+.+....-.. .
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~~-~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLEP-L 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeecc-C
Confidence 65432 3456899999999999754 56689999999999998886 8999654332 3345555443322110 1
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
...++.+||.+|+.+||..||+|.++|.||+|...
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 11289999999999999999999999999999864
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=282.20 Aligned_cols=242 Identities=45% Similarity=0.749 Sum_probs=204.3
Q ss_pred CCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCChHHH
Q 009091 106 QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDK 185 (544)
Q Consensus 106 ~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 185 (544)
+||.||+|.+..++..+|+|++........ .+.+.+|++.++++. |+||+++++.+......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999998899999999865432111 678899999999996 99999999999999999999999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccccC
Q 009091 186 IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265 (544)
Q Consensus 186 l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~a 265 (544)
+.....++...+..++.+++.++.+||+.+++|+||+|+||+++. ++.++|+|||.+.............++..|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---DGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---CCcEEEccccceeeeccccccccccCCcCCCC
Confidence 987766899999999999999999999999999999999999954 35799999999988766544456678999999
Q ss_pred ccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCC
Q 009091 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWA-ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI 343 (544)
Q Consensus 266 PE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 343 (544)
||.+. ..++.++||||||+++|+|++|..||.. .........+....... ......++..+.+++.+||..+|++||
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-PPPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-ccccccCCHHHHHHHHHHccCCchhcc
Confidence 99875 5688899999999999999999999987 44444444444333222 222122788999999999999999999
Q ss_pred ChhhhhCCCcc
Q 009091 344 TSAEVLEHPWM 354 (544)
Q Consensus 344 s~~ell~hp~f 354 (544)
++.++++||||
T Consensus 234 ~~~~~~~~~~~ 244 (244)
T smart00220 234 TAEEALQHPFF 244 (244)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=283.28 Aligned_cols=255 Identities=27% Similarity=0.447 Sum_probs=205.4
Q ss_pred ecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----eEEE
Q 009091 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-----SVHL 172 (544)
Q Consensus 98 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~~~l 172 (544)
-.+.||.|+||.||.+.+..+|+.||+|++.. ...+-...+.+.+|+.+|..++ |.||+..++.....+ .+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHHH
Confidence 34679999999999999999999999998743 3334455678899999999998 999999888765443 4678
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
++|++. .+|...+.....++...++-+.+||++||.|||+.+|.||||||.|.|+ +.+..+||||||+++......
T Consensus 135 ~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhh
Confidence 999995 4888888888899999999999999999999999999999999999999 667899999999998654332
Q ss_pred --ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh------------------
Q 009091 253 --VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------------ 310 (544)
Q Consensus 253 --~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~------------------ 310 (544)
.....+-|..|+|||++.+ .|+.+.||||.||++.||+.++..|...+.-+.++.|..
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 2334467889999999875 599999999999999999999999987766554443322
Q ss_pred -----CCccCCCCcc-c------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 311 -----GGVDFESEPW-L------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 311 -----~~~~~~~~~~-~------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+....+..+. . .-.-+..+++..+|.+||.+|.+.++.+.|++..++.
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 2221111110 0 1123677899999999999999999999999998764
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=258.17 Aligned_cols=212 Identities=25% Similarity=0.358 Sum_probs=178.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+....+..||+|+||.|-+.++..+|...|+|.+... .+.+..+++.+|+.+..+...+|.+|.++|.+..++.+||.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t--vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT--VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh--cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 3445567899999999999999999999999999543 34566788899999998888899999999999999999999
Q ss_pred EeccCCCChHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 174 MELCSGGELFDKI----IAQGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 174 ~e~~~~~~L~~~l----~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||.|.- ||..+. ...+.+++..+-+|+..++.||.|||++ .|+|||+||+|||+ +..+.||+||||.+..+
T Consensus 124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYL 199 (282)
T ss_pred HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceee
Confidence 999954 775443 3456799999999999999999999975 89999999999999 55568999999999877
Q ss_pred cCCCceecccCCccccCccccc-----ccCCCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhC
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLR-----RSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKG 311 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~ 311 (544)
.+.-..+-..|...|||||.+. ..|+-++||||||+++.||.+++.||..- +.-+.+.++...
T Consensus 200 ~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 200 VDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 6654434457889999999874 35889999999999999999999999764 445566666654
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=276.75 Aligned_cols=256 Identities=29% Similarity=0.483 Sum_probs=206.3
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 167 (544)
++..+|.-+..+|.|+- .|..|-+.-.++.||+|+.... ........+..+|..++..+. |+||++++.+|.-.
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l 90 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTL 90 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccH
Confidence 34556888889999998 7888888889999999988665 444556677889999999997 99999999998643
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+|+|||+|.. +|...+. -.+....+..++.|++.|+.|||+.||+||||||+||++ ..++.+||.|||+
T Consensus 91 ~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 91 EEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGL 164 (369)
T ss_pred HHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchh
Confidence 368999999954 8888776 457788999999999999999999999999999999999 5567899999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh-------------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------- 310 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~------------- 310 (544)
|+.....-..+.++.|..|+|||++- -.|...+||||+||++.||++|+..|.+....+.+..+..
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred hcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 99876655567789999999999874 3599999999999999999999999977654333322211
Q ss_pred ---------CCc---------cCCCCccc-------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 311 ---------GGV---------DFESEPWL-------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 311 ---------~~~---------~~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
... .++...+. .-...+++++.+||-.||++|.+++++|+||||+
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 000 00000000 1134689999999999999999999999999997
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=303.44 Aligned_cols=257 Identities=21% Similarity=0.280 Sum_probs=184.1
Q ss_pred cccceecceecccCCeEEEEEEEC----------------CCCCeEEEEEEeeccccC-----------hhcHHHHHHHH
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN----------------STGNSYACKSILKRKLVN-----------KQDREDIKREI 145 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~----------------~~~~~~avK~~~~~~~~~-----------~~~~~~~~~E~ 145 (544)
.+.|.+.++||+|+||+||+|... ..++.||||++....... ....+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 567999999999999999999742 345679999885322100 00112234577
Q ss_pred HHHHhccCCCC-----eeEEEEEEEe--------CCeEEEEEeccCCCChHHHHHHcC----------------------
Q 009091 146 QIMQHLSGQQN-----IVEFRGAYED--------RQSVHLVMELCSGGELFDKIIAQG---------------------- 190 (544)
Q Consensus 146 ~~l~~l~~h~~-----iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~---------------------- 190 (544)
.++.++. |.+ +++++++|.. .+..+|||||+++++|.+++....
T Consensus 224 ~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 7777776 433 3567777643 356899999999999999886421
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceec--ccCCccccCc
Q 009091 191 --HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAP 266 (544)
Q Consensus 191 --~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~gt~~y~aP 266 (544)
.++...++.++.|++.+|.|||+.+|+||||||+|||++ .+..+||+|||++........... ..+|+.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 134567889999999999999999999999999999994 445799999999976543322222 2347899999
Q ss_pred cccccc---------------------CC--CcchHHHHHHHHHHHhhCCC-CCCCCChH-----------HHHHHHHhC
Q 009091 267 EVLRRS---------------------YG--KEIDVWSAGVILYILLSGVP-PFWAETEK-----------GIFDAILKG 311 (544)
Q Consensus 267 E~~~~~---------------------~~--~~~DiwslG~~l~el~tg~~-pf~~~~~~-----------~~~~~i~~~ 311 (544)
|++... ++ .+.||||+||++|+|++|.. ||...... .....+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 987421 11 24799999999999999886 66432110 011111112
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCc---CCCCChhhhhCCCccc
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDP---KKRITSAEVLEHPWMR 355 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rps~~ell~hp~f~ 355 (544)
.. ..+.+...++..++|+.+||..+| .+|+|++|+|+||||.
T Consensus 460 ~~--~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 460 KY--DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred CC--CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 22 223455678999999999999866 6899999999999995
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=281.12 Aligned_cols=245 Identities=24% Similarity=0.351 Sum_probs=189.3
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHh--ccCCCCeeEEEEEEEeC-
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH--LSGQQNIVEFRGAYEDR- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~~iv~~~~~~~~~- 167 (544)
++.+..++.+.||+|.||+||+|.++ |..||||++. ..+...+.+|.++++. |+ |+||+.+++.-..+
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~------srdE~SWfrEtEIYqTvmLR-HENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFS------SRDERSWFRETEIYQTVMLR-HENILGFIAADNKDN 278 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc--CCceEEEEec------ccchhhhhhHHHHHHHHHhc-cchhhhhhhccccCC
Confidence 34566889999999999999999987 8999999983 3455678888888774 55 99999999875433
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------cCCEeecCCCCceeeecCCCCcc
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF--------MGVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~--------~~ivHrDikp~Nill~~~~~~~~ 236 (544)
..+|||++|.+.|||+|+|.+ ..++.+....++.-++.||+|||. ..|.|||||..|||+. .++.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK---kn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc---cCCc
Confidence 268999999999999999988 679999999999999999999994 3699999999999994 4557
Q ss_pred EEEeecCCcccccCCC-----ceecccCCccccCcccccccC-------CCcchHHHHHHHHHHHhhC----------CC
Q 009091 237 LKATDFGLSVFIDEGK-----VYRDIVGSAYYVAPEVLRRSY-------GKEIDVWSAGVILYILLSG----------VP 294 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DiwslG~~l~el~tg----------~~ 294 (544)
.-|+|+|+|....... .....+||.+|||||++.... -..+||||||.++||++.+ ..
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 9999999998765432 123568999999999996432 2358999999999999874 57
Q ss_pred CCCCCC-----hHHHHHHHHhCCccCCCCcccCCCH---HHHHHHHHhcccCcCCCCChhhh
Q 009091 295 PFWAET-----EKGIFDAILKGGVDFESEPWLLISD---SAKDLVRKMLIQDPKKRITSAEV 348 (544)
Q Consensus 295 pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~el 348 (544)
||++.. .+++.+-+.-.......+..-.-.+ .+..+++.||..||.-|.||--+
T Consensus 435 Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 435 PYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred CcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 886542 2333333333333333322211223 35578999999999999988543
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=277.67 Aligned_cols=239 Identities=26% Similarity=0.393 Sum_probs=187.0
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc-CCCCeeEEEEEEEeCC----eE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS-GQQNIVEFRGAYEDRQ----SV 170 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~~~~~~~~----~~ 170 (544)
.++.++||+|.||.||+|... ++.||||++ ..+..+.+.+|-++..... .|+||++++++-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~--~~~VAVKif------p~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD--NRLVAVKIF------PEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc--CceeEEEec------CHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 567789999999999999865 689999998 4567788999988877432 4999999999876544 79
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---------cCCEeecCCCCceeeecCCCCccEEEee
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF---------MGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~---------~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
+||+||.+.|+|.++|+.+ .++.....+++.-+++||+|||+ ..|+|||||..|||| ..+++.-|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeec
Confidence 9999999999999999874 68999999999999999999995 369999999999999 4556899999
Q ss_pred cCCcccccCCCce---ecccCCccccCcccccccCC-------CcchHHHHHHHHHHHhhCCC------------CCCC-
Q 009091 242 FGLSVFIDEGKVY---RDIVGSAYYVAPEVLRRSYG-------KEIDVWSAGVILYILLSGVP------------PFWA- 298 (544)
Q Consensus 242 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~-------~~~DiwslG~~l~el~tg~~------------pf~~- 298 (544)
||+|..+..+... ...+||.+|||||++.+..+ .+.||||+|.|||||+++-. ||..
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 9999987654322 23689999999999975432 35899999999999999643 3321
Q ss_pred ----CChHHHHHHHHhCCccCCCC-ccc--CCCHHHHHHHHHhcccCcCCCCChh
Q 009091 299 ----ETEKGIFDAILKGGVDFESE-PWL--LISDSAKDLVRKMLIQDPKKRITSA 346 (544)
Q Consensus 299 ----~~~~~~~~~i~~~~~~~~~~-~~~--~~~~~~~~li~~~l~~dp~~Rps~~ 346 (544)
.+-+++...+.+.+.+...+ .|. .....+++.+..||++||+.|.|+.
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 12234444444443322221 222 1235688999999999999999984
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=303.83 Aligned_cols=248 Identities=26% Similarity=0.412 Sum_probs=205.7
Q ss_pred ccceecceecccCCeEEEEEEEC----C---CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN----S---TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~----~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
+...+.+.||+|+||.|++|.-. . ....||||.++.... ....+.+..|+++|+.+..|+||+.++|++..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 34467779999999999998743 1 145799998865442 36678899999999999999999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~ 230 (544)
.+.+++|+||+..|+|.++++..+ .++......++.||+.|++||++.++|||||-.+|||++.
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK 453 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC
Confidence 999999999999999999998866 3888999999999999999999999999999999999954
Q ss_pred CCCCccEEEeecCCcccccCCCceec--ccC--CccccCcccccc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCC-hHH
Q 009091 231 KDGGAMLKATDFGLSVFIDEGKVYRD--IVG--SAYYVAPEVLRR-SYGKEIDVWSAGVILYILLS-GVPPFWAET-EKG 303 (544)
Q Consensus 231 ~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~g--t~~y~aPE~~~~-~~~~~~DiwslG~~l~el~t-g~~pf~~~~-~~~ 303 (544)
+..+||+|||+|+.......+.. ..| ...|||||.+.. .|+.++|||||||+||||++ |..||.+.. ..+
T Consensus 454 ---~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 454 ---NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred ---CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 45899999999997665444432 222 235999999874 69999999999999999999 889998755 555
Q ss_pred HHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
+++ .++.+.....| ..+++++.++++.||+.+|++||++.++.
T Consensus 531 l~~-~l~~G~r~~~P--~~c~~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 531 LLE-FLKEGNRMEQP--EHCSDEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred HHH-HHhcCCCCCCC--CCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 655 44444444444 35799999999999999999999999874
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=296.62 Aligned_cols=258 Identities=28% Similarity=0.486 Sum_probs=221.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|.+..++|.|.||.||+|+++.++...|+|+++.. ...+..-+..|+-+++..+ |||||.+++.+.....+||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCC-CcChHHHHhhhhhhcCcEE
Confidence 45699999999999999999999999999999999543 4556677889999999998 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
+||||.||+|.+...-.+.+++.++...++..+.||+|||+.|-+|||||-.|||+++. +.+|++|||.+..+...-
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~---gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE---GDVKLADFGVSAQITATI 166 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc---CceeecccCchhhhhhhh
Confidence 99999999999988888999999999999999999999999999999999999999654 469999999998775432
Q ss_pred -ceecccCCccccCcccc----cccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC-CcccCCCHH
Q 009091 253 -VYRDIVGSAYYVAPEVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES-EPWLLISDS 326 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~----~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 326 (544)
....+.||+.|||||+- .+.|...+|||++|+...|+-.-..|.........+....+..++.+. ......++.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~ 246 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEF 246 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHH
Confidence 23467999999999975 367999999999999999999999887666555555444454443332 122356889
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|-+|++.+|.++|++||+++.+|.|||..-.
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 9999999999999999999999999998654
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=278.01 Aligned_cols=258 Identities=30% Similarity=0.479 Sum_probs=202.6
Q ss_pred cccccceecceecccCCeEEEEEEECC---CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENS---TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.+...|.+..+||.|.|++||++.+.. .++.||+|.+... ....++.+|+++|..+.++.||+.+.+++..+
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 345669999999999999999999877 7889999988543 33467899999999999999999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+.+.+||||++..+-.+++. .++...++.+++.++.||.++|.+|||||||||+|+|.+...+ .-.|+|||+|..
T Consensus 108 d~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~--rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ--RGVLVDFGLAQR 182 (418)
T ss_pred CeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC--CceEEechhHHH
Confidence 99999999999987777664 4678899999999999999999999999999999999987655 456799999872
Q ss_pred ccC-------------------C---------------Cce-----------ecccCCccccCccccc--ccCCCcchHH
Q 009091 248 IDE-------------------G---------------KVY-----------RDIVGSAYYVAPEVLR--RSYGKEIDVW 280 (544)
Q Consensus 248 ~~~-------------------~---------------~~~-----------~~~~gt~~y~aPE~~~--~~~~~~~Diw 280 (544)
... + ... -...||++|+|||++. ...+.++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 110 0 000 0236999999999985 4578899999
Q ss_pred HHHHHHHHHhhCCCCCCCCChH-HHH-------------H-HHHhCC--c-------------------------c----
Q 009091 281 SAGVILYILLSGVPPFWAETEK-GIF-------------D-AILKGG--V-------------------------D---- 314 (544)
Q Consensus 281 slG~~l~el~tg~~pf~~~~~~-~~~-------------~-~i~~~~--~-------------------------~---- 314 (544)
|.||+++.++++..||....+. +.+ + ....+. . .
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 9999999999999999654321 000 0 000011 0 0
Q ss_pred -CCCCcc-cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 315 -FESEPW-LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 315 -~~~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.....+ ...+..+.+|+.+||..||.+|.||+++|+||||.+..
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 000011 12355889999999999999999999999999998543
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=322.86 Aligned_cols=240 Identities=20% Similarity=0.241 Sum_probs=182.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..+...+.||+|+||.||+|.+..++..||+|++..... ....|++.+++++ |||||++++++...+..++|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEE
Confidence 446667889999999999999998999999998743221 1134688899997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH---FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||+++|+|.+++. .+++..+..++.|++.||+||| +.+|+||||||+||++.. ....++. ||.+.....
T Consensus 762 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~---~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 762 HEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG---KDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC---CCceEEE-ecccccccc
Confidence 99999999999985 3788999999999999999999 679999999999999954 3345544 555443322
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh--HHHHHHH---HhC---------CccC
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAI---LKG---------GVDF 315 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~--~~~~~~i---~~~---------~~~~ 315 (544)
. ....||+.|+|||++. ..++.++|||||||++|||+||+.||..... ....... ... ....
T Consensus 835 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 835 D---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred C---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence 1 2336889999999886 4689999999999999999999999854321 1111111 000 0000
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..........++.+++.+||+.||++|||+.++++.
T Consensus 912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000000112356789999999999999999998764
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=286.41 Aligned_cols=244 Identities=25% Similarity=0.370 Sum_probs=203.0
Q ss_pred ceecceecccCCeEEEEEEECCCCC----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGN----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
.+..++||+|+||+||++.+-..|. +||+|++... .......++..|+-.|.+|+ |||++++++++.... +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HH
Confidence 3456789999999999999876654 5788877432 34445678899999999998 999999999997655 88
Q ss_pred EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||++|+++|+|.++++.+ ..+-....+.|..||++|+.|||.++++||||-.+|||+...+ .+||.|||+++....
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~---hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN---HVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC---eEEEEecchhhccCc
Confidence 999999999999999874 5688999999999999999999999999999999999996544 699999999998764
Q ss_pred CCc-eecccC--CccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 GKV-YRDIVG--SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~~~-~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
... +....| .+.|||-|.+. ..|+.++|||||||++||++| |..|+.+...+++-+.+..+.. ++.++ .++-
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqPp--iCti 927 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQPP--ICTI 927 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCCC--CccH
Confidence 332 222222 45688888776 669999999999999999999 9999999888887777666544 44444 5788
Q ss_pred HHHHHHHHhcccCcCCCCChhhhh
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell 349 (544)
++.-++.+||-.|+..||+++++.
T Consensus 928 DVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 928 DVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred HHHHHHHHHhccCcccCccHHHHH
Confidence 999999999999999999999874
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=280.57 Aligned_cols=199 Identities=30% Similarity=0.549 Sum_probs=176.2
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----hhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCC
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----KQDREDIKREIQIMQHLS--GQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~ 168 (544)
|.....+|.|+||.|++|.++.+...|+||.|.+++..- ....-.+-.||++|..|. .|+||++++++|++++
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd 642 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD 642 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence 889999999999999999999999999999998765432 122233557999999986 3899999999999999
Q ss_pred eEEEEEecc-CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELC-SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
++||+||-. +|.+|.+++..+..+++.++..|++|++.|+++||+.||||||||-+||.+ +.++.+||+|||.|..
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSAAY 719 (772)
T ss_pred eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccchhh
Confidence 999999976 567899999999999999999999999999999999999999999999999 6777999999999987
Q ss_pred ccCCCceecccCCccccCccccccc--CCCcchHHHHHHHHHHHhhCCCCCCC
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWA 298 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~~l~el~tg~~pf~~ 298 (544)
..+++ ...++||..|.|||++++. .+..-|||+||++||-++....||++
T Consensus 720 ~ksgp-fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 720 TKSGP-FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hcCCC-cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 66554 4678999999999999864 47889999999999999999999974
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-33 Score=251.71 Aligned_cols=245 Identities=24% Similarity=0.373 Sum_probs=194.6
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEE-EEEeCC
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG-AYEDRQ 168 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~-~~~~~~ 168 (544)
-++.+.|.+.+.||+|.||.+.+|.++.+...+++|.+.+. ......|.+|...--.|..|.||+.-++ .|+..+
T Consensus 20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 20 VDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred cchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 34567799999999999999999999999999999987543 3456788899988888888999998666 567778
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+++++||++.|+|.+-+.. ..+-+.....++.|+++|++|||+.++||||||.+||||...+- .+|||||||+....
T Consensus 96 ~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df-~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADF-YRVKLCDFGLTRKV 173 (378)
T ss_pred eEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCc-cEEEeeeccccccc
Confidence 89999999999999887765 45888999999999999999999999999999999999976554 48999999998765
Q ss_pred cCCCceecccCCccccCccccc----cc--CCCcchHHHHHHHHHHHhhCCCCCCCCChHH----HHHHHHhCCccCCCC
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLR----RS--YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESE 318 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~----~~--~~~~~DiwslG~~l~el~tg~~pf~~~~~~~----~~~~i~~~~~~~~~~ 318 (544)
...-. ..--+..|.+||+.. +. ..+.+|+|.||+++|.++||..||....... .+.....+.-.-.+.
T Consensus 174 g~tV~--~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~ 251 (378)
T KOG1345|consen 174 GTTVK--YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK 251 (378)
T ss_pred Cceeh--hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch
Confidence 43211 122355799999753 22 5788999999999999999999997543221 122233332222233
Q ss_pred cccCCCHHHHHHHHHhcccCcCCC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKR 342 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~R 342 (544)
....+++.+..+.++-|.+++++|
T Consensus 252 ~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 252 KFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred hhcccCHHHHHHHHHhcCCccccc
Confidence 345678999999999999999999
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=237.26 Aligned_cols=211 Identities=43% Similarity=0.705 Sum_probs=183.7
Q ss_pred ecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 009091 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181 (544)
Q Consensus 102 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 181 (544)
||+|++|.||++.+..++..+++|++...... ...+.+.+|+..++.+. |++|+++++++......++++|++.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~--~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS--SLLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccch--hHHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 68999999999999888999999988543211 13567899999999998 8999999999999999999999999899
Q ss_pred hHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-ceecccC
Q 009091 182 LFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VYRDIVG 259 (544)
Q Consensus 182 L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g 259 (544)
|.+++... ..++...++.++.+++.++.+||+.|++|+||+|.||++... ...++|+|||.+....... ......+
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEccCCcchhhcccC
Confidence 99998775 578999999999999999999999999999999999999651 3479999999998765432 1234567
Q ss_pred CccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhccc
Q 009091 260 SAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337 (544)
Q Consensus 260 t~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 337 (544)
...|++||.+.. .++.++|+|++|+++++| ..+.+++..||+.
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~~ 200 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhhC
Confidence 889999998865 678899999999999999 5778999999999
Q ss_pred CcCCCCChhhhhCCC
Q 009091 338 DPKKRITSAEVLEHP 352 (544)
Q Consensus 338 dp~~Rps~~ell~hp 352 (544)
||.+||++.++++|+
T Consensus 201 ~p~~R~~~~~l~~~~ 215 (215)
T cd00180 201 DPEKRPSAKEILEHL 215 (215)
T ss_pred CcccCcCHHHHhhCC
Confidence 999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=240.17 Aligned_cols=249 Identities=19% Similarity=0.231 Sum_probs=196.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCC-----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-e
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGN-----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-D 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~ 166 (544)
+.++++...+-+|.||.||.|.++.... .|-+|.++.. .+.-....+..|.-++..+. |||+..+.+++. +
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCc-CCCccceeEEEeec
Confidence 4568888889999999999997764322 3444544221 12344567788888888887 999999999875 4
Q ss_pred CCeEEEEEeccCCCChHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEE
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ--------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vk 238 (544)
....++++.++.-|+|..+|... +.++...+..++.|++.|++|||++||||.||..+|.+| +....||
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVk 436 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVK 436 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEE
Confidence 56788889999889999999742 236677888999999999999999999999999999999 5567899
Q ss_pred EeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCc
Q 009091 239 ATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 239 l~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~ 313 (544)
|+|=.+++.+.+.+.. ..--....||+||.+. ..|+.++|+|||||+||||+| |+.||..-...++...+. .++
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk-dGy 515 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK-DGY 515 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh-ccc
Confidence 9999999876554321 1112356799999886 569999999999999999999 889987776666655544 445
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++..| .++|+++..++..||..+|++||+++++..
T Consensus 516 RlaQP--~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 RLAQP--FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred eecCC--CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 54444 368999999999999999999999999753
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=291.51 Aligned_cols=197 Identities=19% Similarity=0.226 Sum_probs=147.1
Q ss_pred CCeeEEEEEEE-------eCCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCce
Q 009091 155 QNIVEFRGAYE-------DRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENF 226 (544)
Q Consensus 155 ~~iv~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Ni 226 (544)
+||++++++|. ....++++||++ +++|.+++.. ...+++..++.+++||+.||+|||++||+||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 57777777662 234577888988 5699999975 34599999999999999999999999999999999999
Q ss_pred eeecC----------------CCCccEEEeecCCcccccCC-----------------CceecccCCccccCccccc-cc
Q 009091 227 LLSNK----------------DGGAMLKATDFGLSVFIDEG-----------------KVYRDIVGSAYYVAPEVLR-RS 272 (544)
Q Consensus 227 ll~~~----------------~~~~~vkl~Dfg~a~~~~~~-----------------~~~~~~~gt~~y~aPE~~~-~~ 272 (544)
||+.. +....+||+|||+++..... ......+||+.|||||++. ..
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 191 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS 191 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC
Confidence 99531 23456788888887643210 0011246899999999875 56
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCC
Q 009091 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352 (544)
Q Consensus 273 ~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 352 (544)
++.++|||||||+||||++|..|+.... .....+..... + +......+...+++.+||.+||.+||++.++|+||
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--P-PQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--C-hhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhch
Confidence 8999999999999999999988875322 12222222111 1 11112245678899999999999999999999999
Q ss_pred ccccC
Q 009091 353 WMREG 357 (544)
Q Consensus 353 ~f~~~ 357 (544)
||.+.
T Consensus 267 ~~~~~ 271 (793)
T PLN00181 267 FINEP 271 (793)
T ss_pred hhhhh
Confidence 99875
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=235.75 Aligned_cols=210 Identities=42% Similarity=0.743 Sum_probs=179.1
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||.|++|.||++.+..++..+|+|.+...... ...+.+.+|+..++++. |+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEe
Confidence 56778999999999999999988999999998654321 25678889999999996 9999999999999899999999
Q ss_pred ccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 176 LCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
++++++|.+++..... +++..+..++.+++.++.+||+.+++|+||+|.||+++. ...++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---DGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeeCceeeEecCcccc
Confidence 9999999999988766 899999999999999999999999999999999999954 3579999999998775542
Q ss_pred ceecccCCccccCcccc-c-ccCCCcchHHHHHHHHHHHhhCCCCCCC-CChH-HHHHHHHhC
Q 009091 253 VYRDIVGSAYYVAPEVL-R-RSYGKEIDVWSAGVILYILLSGVPPFWA-ETEK-GIFDAILKG 311 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~~l~el~tg~~pf~~-~~~~-~~~~~i~~~ 311 (544)
......++..|++||.+ . ..++.++|+|+||+++++|++|+.||.. .... .+.+.+..+
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG 217 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence 33455788899999987 3 4477799999999999999999999977 3443 555555554
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=214.58 Aligned_cols=162 Identities=25% Similarity=0.335 Sum_probs=127.3
Q ss_pred CChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceeccc
Q 009091 180 GELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258 (544)
Q Consensus 180 ~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 258 (544)
|+|.+++... ..+++..++.++.|++.||.|||+.+ ||+|||++ .++.+|+ ||++....... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----SR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----CC
Confidence 6899999874 45999999999999999999999998 99999994 4457888 99988664422 26
Q ss_pred CCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHhCCccCCC---CcccCCCH--HHHHHH
Q 009091 259 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFES---EPWLLISD--SAKDLV 331 (544)
Q Consensus 259 gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~~~~~~~~~---~~~~~~~~--~~~~li 331 (544)
||+.|||||++. ..++.++|||||||++|||++|..||..... ...+..+......... .....++. .+.++|
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 899999999886 5689999999999999999999999976543 2333333332222111 11112333 699999
Q ss_pred HHhcccCcCCCCChhhhhCCCcccc
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.+||..||.+||++.++++|+|+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999864
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-26 Score=224.63 Aligned_cols=253 Identities=24% Similarity=0.282 Sum_probs=193.1
Q ss_pred cceecceecccCCeEEEEEEECCCC-CeEEEEEEeeccccChhcHHHHHHHHHHHHhcc---CCCCeeEEEEEE-EeCCe
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLS---GQQNIVEFRGAY-EDRQS 169 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~iv~~~~~~-~~~~~ 169 (544)
+|.+.++||+|+||.||+|.+..++ ..+|+|....... .. ...+..|+.++..+. +.+++..+++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~--~~-~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG--SK-PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc--CC-CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 6999999999999999999988765 5788887654321 11 126788999999887 346899999998 57778
Q ss_pred EEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC--CccEEEeecCCc
Q 009091 170 VHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG--GAMLKATDFGLS 245 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~--~~~vkl~Dfg~a 245 (544)
.+|||+.+ |.+|.++.... +.++...+..++.|++.+|.+||+.|++||||||+|++++.... ...+.|.|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 88999987554 57999999999999999999999999999999999999976532 257999999999
Q ss_pred c--cccCCC--------c-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc
Q 009091 246 V--FIDEGK--------V-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 246 ~--~~~~~~--------~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~ 313 (544)
+ ...... . .....||..|+++.+.. ...+++.|+||++.++.+++.|..||...........+.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8 321111 0 12356999999999865 5689999999999999999999999977654332332222211
Q ss_pred cCCCC-cccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 314 DFESE-PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 314 ~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..... .....+.++..+...+-..+...+|....+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 11111 122345778888888888888888888776443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=210.01 Aligned_cols=247 Identities=20% Similarity=0.297 Sum_probs=191.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.-.|+++++||+|+||+++.+++.-++..||||.-.. .....++..|....+.|.+.++|..++.+...+-+-.|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-----kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-----KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccc-----cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 3459999999999999999999999999999996422 33456788999999999989999999988888888899
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC--CCccEEEeecCCccccc
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--GGAMLKATDFGLSVFID 249 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--~~~~vkl~Dfg~a~~~~ 249 (544)
|||++ |.+|.+++.-+ +.++...++.++.|++.-++|+|++.+|+|||||+|+||+... ....|.|+|||+|+...
T Consensus 102 VidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred hhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 99999 88999988765 5699999999999999999999999999999999999996433 23579999999999876
Q ss_pred CCCc--------eecccCCccccCccc-ccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH---HHHHHHhCCccCCC
Q 009091 250 EGKV--------YRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFES 317 (544)
Q Consensus 250 ~~~~--------~~~~~gt~~y~aPE~-~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~---~~~~i~~~~~~~~~ 317 (544)
+... .....||.+||+-.. +...-+.+.|+=|||-+++..+.|..||.+..... -++.|-..+...+.
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI 260 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH
Confidence 5432 234579999999875 45668899999999999999999999998765433 33333222111111
Q ss_pred C-cccCCCHHHHHHHHHhcccCcCCCCCh
Q 009091 318 E-PWLLISDSAKDLVRKMLIQDPKKRITS 345 (544)
Q Consensus 318 ~-~~~~~~~~~~~li~~~l~~dp~~Rps~ 345 (544)
. .-..+|.++...++-.-..+-.+-|..
T Consensus 261 ~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 261 EVLCEGFPEEFATYLRYVRRLDFFETPDY 289 (449)
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence 1 011345566555555444444444544
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-28 Score=256.98 Aligned_cols=256 Identities=29% Similarity=0.460 Sum_probs=194.9
Q ss_pred eecceecccCCeEEEEEEECCCCCeEEEEEEeec---cccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKR---KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~---~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
.....+|.|++|.|+.+.........+.|.+... ..........+..|+-+-..|. |+|++..+..+.+.....-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhh
Confidence 5678899999998888887766666666654311 1111122223667777788887 99997766655554444445
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC--
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-- 251 (544)
||||++ +|..++...+.++...+..+++||+.||.|+|..||.|||||++|+++.. .+.+||+|||.+....-.
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~---~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE---NGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec---CCceEEeecCcceeeccCcc
Confidence 999999 99999998888999999999999999999999999999999999999954 458999999998765322
Q ss_pred ---CceecccCCccccCccccc-ccCCC-cchHHHHHHHHHHHhhCCCCCCCCChHHHH--HHHHhCCccC---CCCccc
Q 009091 252 ---KVYRDIVGSAYYVAPEVLR-RSYGK-EIDVWSAGVILYILLSGVPPFWAETEKGIF--DAILKGGVDF---ESEPWL 321 (544)
Q Consensus 252 ---~~~~~~~gt~~y~aPE~~~-~~~~~-~~DiwslG~~l~el~tg~~pf~~~~~~~~~--~~i~~~~~~~---~~~~~~ 321 (544)
......+|+..|+|||++. ..|.+ ..||||.|+++..|.+|+.||......+.. .......... +...+.
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS 555 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence 2334678999999999986 45654 589999999999999999999765443221 1111111111 122234
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.++...+.+|.+||++||.+|.|+++|++.+||++.
T Consensus 556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 578899999999999999999999999999999875
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=203.73 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=195.6
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+...|+++++||.|+||.+|+|....+|..||||+-.. ......+..|..+.+.|++...|..+..+..+..+-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-----~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS-----KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecc-----cCCCcchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 345679999999999999999999999999999997532 223456788999999999888999999999899999
Q ss_pred EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
.+||+++ |.+|.+++.- .+.++...++.++-|++.-++|+|.++++||||||+|+|.+-......+.|+|||+|+...
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 9999999 8899998864 4679999999999999999999999999999999999999765566679999999999875
Q ss_pred CCCc--------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH---HHHHHHHhCCccCCC
Q 009091 250 EGKV--------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK---GIFDAILKGGVDFES 317 (544)
Q Consensus 250 ~~~~--------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---~~~~~i~~~~~~~~~ 317 (544)
+... .....||.+|.+-.... ...+.+.|+=|+|.+|..+..|..||.+.... .-++.|...+...+.
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 4321 23467999999876543 45688999999999999999999999886543 334455444333222
Q ss_pred Ccc-cCCCHHHHHHHHHhcccCcCCCC
Q 009091 318 EPW-LLISDSAKDLVRKMLIQDPKKRI 343 (544)
Q Consensus 318 ~~~-~~~~~~~~~li~~~l~~dp~~Rp 343 (544)
... ..+|.++.-.+.-|-..--.+-|
T Consensus 246 e~LC~G~P~EF~myl~Y~R~L~F~E~P 272 (341)
T KOG1163|consen 246 EVLCKGFPAEFAMYLNYCRGLGFEEKP 272 (341)
T ss_pred HHHhCCCcHHHHHHHHHHhhcCCCCCC
Confidence 211 24577888888777655444433
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-25 Score=218.50 Aligned_cols=258 Identities=34% Similarity=0.529 Sum_probs=207.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+.++++|+++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 678889999999999999987 78899988665543333567889999999999844489999999988888899999
Q ss_pred ccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 176 LCSGGELFDKIIAQG---HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
++.++++.+++.... .++...+..++.|++.++.|+|+.+++||||||+||++...+. .++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~--~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR--VVKLIDFGLAKLLPDPG 156 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC--eEEEeccCcceecCCCC
Confidence 999999997777664 7999999999999999999999999999999999999954321 59999999998654432
Q ss_pred -------ceecccCCccccCcccccc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHhCCcc-CC
Q 009091 253 -------VYRDIVGSAYYVAPEVLRR----SYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVD-FE 316 (544)
Q Consensus 253 -------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~~l~el~tg~~pf~~~~~----~~~~~~i~~~~~~-~~ 316 (544)
......||..|++||.+.+ .++...|+||+|++++++++|..||..... ......+...... ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 2356789999999998864 678899999999999999999999877653 3444444444333 22
Q ss_pred CCcccCC----CHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 317 SEPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 317 ~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
....... ...+.+++..|+..+|..|.+..+...++|.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 2211111 25789999999999999999999999987765543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=224.32 Aligned_cols=175 Identities=19% Similarity=0.224 Sum_probs=131.8
Q ss_pred cccccceecceecccCCeEEEEEEECC-CCCeEEEEEEeeccc--cChhcHHHHHHHHHHHHhccCCCCeeE-EEEEEEe
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENS-TGNSYACKSILKRKL--VNKQDREDIKREIQIMQHLSGQQNIVE-FRGAYED 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~-~~~~~~~ 166 (544)
.+...|.+.+.||+|+||+||+|.+.. ++..+|||++..... ........+.+|+.+|+++. |+||+. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 344569999999999999999999876 677789998743211 12234567899999999998 888874 5432
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecC-CCCceeeecCCCCccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL-KPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDi-kp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
+..||||||++|++|.. +. ... ...++.|++.+|.|||+.||+|||| ||+|||++ .++.+||+|||+|
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGlA 159 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQLA 159 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECccc
Confidence 46799999999999963 21 111 2467899999999999999999999 99999994 3457999999999
Q ss_pred ccccCCCc---------eecccCCccccCccccccc-------CCCcchHH
Q 009091 246 VFIDEGKV---------YRDIVGSAYYVAPEVLRRS-------YGKEIDVW 280 (544)
Q Consensus 246 ~~~~~~~~---------~~~~~gt~~y~aPE~~~~~-------~~~~~Diw 280 (544)
+....... .....+++.|+|||.+... .+..+|-|
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 87654321 1245788899999988521 34456766
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=190.27 Aligned_cols=149 Identities=36% Similarity=0.625 Sum_probs=139.2
Q ss_pred HHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-c
Q 009091 389 VIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-R 467 (544)
Q Consensus 389 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~ 467 (544)
.....|+.++++++++.|..||+|++|.|+..||..+++.+|.+++..++.++|..+|. +.+.|+|.+|+.++.... .
T Consensus 9 ~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 9 LTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred hhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc
Confidence 34567999999999999999999999999999999999999999999999999999999 999999999999887654 4
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
....++++++|+.||+|+||+|+..||+.+|+.+|.. ++++++.+|..+|.|+||.|+|++|++.+...+.
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccCC
Confidence 5668999999999999999999999999999999999 9999999999999999999999999998877653
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-27 Score=235.23 Aligned_cols=239 Identities=28% Similarity=0.484 Sum_probs=204.6
Q ss_pred ecccCCeEEEEEEE---CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 009091 102 LGRGQFGITYLCTE---NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 102 lg~G~~g~Vy~~~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
+|+|+||.|++++. ...+..+|.|+..+......... ....|..++..+++||.+++++..++.++..++++++..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 79999999997653 34577789998866544333222 556788889989889999999999999999999999999
Q ss_pred CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceeccc
Q 009091 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258 (544)
Q Consensus 179 ~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 258 (544)
||.|...+.....+.+.....+...++.+++++|+.+|+|||+|++||++ +.++++++.|||+++..-..... |
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~---c 154 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIA---C 154 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhc---c
Confidence 99999998888889999999999999999999999999999999999999 66778999999999976554332 8
Q ss_pred CCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccC
Q 009091 259 GSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338 (544)
Q Consensus 259 gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 338 (544)
||..|||||+++ ....++|.||||++++||+||..||.. +....|.+.....+. .++..+++++..++..+
T Consensus 155 gt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 155 GTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFKRN 225 (612)
T ss_pred cchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHhhC
Confidence 999999999998 677899999999999999999999987 666777776555544 46889999999999999
Q ss_pred cCCCCCh-----hhhhCCCcccc
Q 009091 339 PKKRITS-----AEVLEHPWMRE 356 (544)
Q Consensus 339 p~~Rps~-----~ell~hp~f~~ 356 (544)
|..|.-. .++++|+||..
T Consensus 226 p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 226 PENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred HHHHhccCcchhHHHhccchhee
Confidence 9999866 68999999975
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=185.03 Aligned_cols=143 Identities=41% Similarity=0.656 Sum_probs=131.8
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccccc----
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE---- 469 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~---- 469 (544)
++..++.++.++|+.||.|++|+|+..||..+++.+|..++..++..+++.+|.|++|.|+|+||+..+.......
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 4567788999999999999999999999999999999999999999999999999999999999998876544321
Q ss_pred -chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 470 -RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 470 -~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+.++++|+.||+|++|+||.+||+.+|..+|.+ +.++++.+++.+|.|+||.|+|+||+++|...
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 34589999999999999999999999999999999 99999999999999999999999999998753
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-24 Score=223.45 Aligned_cols=218 Identities=31% Similarity=0.564 Sum_probs=168.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|..++.|..|+||.||+++|+.+.+++|+| +.+.... +++ ++... +.|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li-------lRn---ilt~a-~npfvv---------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI-------LRN---ILTFA-GNPFVV---------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhhc-ccccchh-------hhc---ccccc-CCccee----------------
Confidence 3788899999999999999999999999995 4332211 001 22222 234444
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC--
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-- 252 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-- 252 (544)
|+=...++.-+.++... +.+++|+|+.||+|||+||+|.+|+. -+.+|++|||+++..-...
T Consensus 136 -----gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~---mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITS---MGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred -----chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeee---cccccccchhhhhhhhhhccc
Confidence 23334444445565544 66899999999999999999999954 4579999999987642110
Q ss_pred -------------c-eecccCCccccCcccc-cccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC
Q 009091 253 -------------V-YRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317 (544)
Q Consensus 253 -------------~-~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 317 (544)
. -...+|||.|.|||++ +..|+..+|+|++|+++||.+.|..||.+.+.++++..++.....++.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE 279 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 279 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence 0 0135899999999986 577999999999999999999999999999999999999888777776
Q ss_pred CcccCCCHHHHHHHHHhcccCcCCCC---ChhhhhCCCccccC
Q 009091 318 EPWLLISDSAKDLVRKMLIQDPKKRI---TSAEVLEHPWMREG 357 (544)
Q Consensus 318 ~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~ell~hp~f~~~ 357 (544)
.. ..++++++++|.++|..+|..|. .+-++.+|+||+..
T Consensus 280 ~d-ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 280 ED-EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred cC-cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 63 35789999999999999999997 45678899999864
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=188.74 Aligned_cols=144 Identities=22% Similarity=0.201 Sum_probs=110.4
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhc-----------------------HHHHHHHHHHHHhccCCC
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-----------------------REDIKREIQIMQHLSGQQ 155 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-----------------------~~~~~~E~~~l~~l~~h~ 155 (544)
...||+|++|.||+|.+. +|+.||||++.......... .....+|+.++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 467999999999999987 89999999997643211110 122345999999997 66
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHcCCEeecCCCCceeeecCCCC
Q 009091 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC-HFMGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 156 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~l-H~~~ivHrDikp~Nill~~~~~~ 234 (544)
++.....+.. . ..+|||||++|+++.........++...+..++.|++.+|.++ |+.||+||||||+|||++.
T Consensus 80 ~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~---- 153 (190)
T cd05147 80 GIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD---- 153 (190)
T ss_pred CCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC----
Confidence 6533222221 2 2379999999887766545567899999999999999999999 7999999999999999962
Q ss_pred ccEEEeecCCcccccC
Q 009091 235 AMLKATDFGLSVFIDE 250 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~ 250 (544)
..++|+|||+|.....
T Consensus 154 ~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 154 GKLYIIDVSQSVEHDH 169 (190)
T ss_pred CcEEEEEccccccCCC
Confidence 3699999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-23 Score=191.61 Aligned_cols=174 Identities=17% Similarity=0.151 Sum_probs=132.4
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHH------HHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~------~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
+..+|++.+.||.|+||.||++.. ++..+|+|++.......+..... +.+|+..+.++. |++|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeee
Confidence 467899999999999999999655 47789999986554333333233 679999999997 999999888765
Q ss_pred eC--------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 166 DR--------QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 166 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
.. +..+|||||++|.+|.+.. .+++ ....+++.+|..||+.|++||||||+||+++. ++ +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~---~g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSK---NG-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeC---CC-E
Confidence 33 4588999999999997763 2333 24568999999999999999999999999954 33 9
Q ss_pred EEeecCCcccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHh
Q 009091 238 KATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILL 290 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~ 290 (544)
+|+|||............. | ++...++.++|+|+||+++..+.
T Consensus 174 ~liDfg~~~~~~e~~a~d~------~----vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKDR------I----DLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhHHH------H----HHHhHhcccccccceeEeehHHH
Confidence 9999998875533221110 0 22345778999999999987654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=183.18 Aligned_cols=188 Identities=18% Similarity=0.224 Sum_probs=139.1
Q ss_pred ecceecccCCeEEEEEEECCCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 98 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
+...|++|+||+||++.. .+..++.+.+...... .......+.+|+++|++|.++++|++++++ +..+++|||
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 457899999999998764 5677776655322111 011122578999999999878999999886 446899999
Q ss_pred cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecC-CCCceeeecCCCCccEEEeecCCcccccCCCce-
Q 009091 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL-KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY- 254 (544)
Q Consensus 177 ~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDi-kp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~- 254 (544)
+.|.+|...+.. . ...++.|++.+|.++|+.||+|||| ||+|||++. ++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~---~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 80 LAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE---DGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC---CCCEEEEECCCceecCCcchHH
Confidence 999888654321 1 2357889999999999999999999 799999953 456999999999865543310
Q ss_pred -----e--------cccCCccccCccccc--ccCC-CcchHHHHHHHHHHHhhCCCCCCCCCh
Q 009091 255 -----R--------DIVGSAYYVAPEVLR--RSYG-KEIDVWSAGVILYILLSGVPPFWAETE 301 (544)
Q Consensus 255 -----~--------~~~gt~~y~aPE~~~--~~~~-~~~DiwslG~~l~el~tg~~pf~~~~~ 301 (544)
. -...++.|++|+.-. ...+ .+.+.++.|..+|.++|+..|+++..+
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 113677888888532 2333 567888999999999999999887654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=197.17 Aligned_cols=234 Identities=26% Similarity=0.381 Sum_probs=150.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC---------CCCeeEEEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG---------QQNIVEFRGAYE 165 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~---------h~~iv~~~~~~~ 165 (544)
....++.||.|+++.||.+++..|+..+|+|++...........+.+++|.-....+.+ |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 35678899999999999999999999999999976654344456777776654444321 112222222211
Q ss_pred ---------eC---C-----eEEEEEeccCCCChHHHHHH---cCCC----CHHHHHHHHHHHHHHHHHHHHcCCEeecC
Q 009091 166 ---------DR---Q-----SVHLVMELCSGGELFDKIIA---QGHY----TEKAAAALCRAIVNVVHHCHFMGVMHRDL 221 (544)
Q Consensus 166 ---------~~---~-----~~~lv~e~~~~~~L~~~l~~---~~~~----~~~~~~~~~~ql~~~l~~lH~~~ivHrDi 221 (544)
.. . ..+++|+-+. ++|.+++.. .... .......+..|++..+++||..||+|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 2367788774 488776542 2222 22333566699999999999999999999
Q ss_pred CCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccccCcccccc---------cCCCcchHHHHHHHHHHHhhC
Q 009091 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR---------SYGKEIDVWSAGVILYILLSG 292 (544)
Q Consensus 222 kp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwslG~~l~el~tg 292 (544)
+|+|+++ +.++.+.|+||+........ ......+..|.|||+... .++.+.|.|+||+++|.|+++
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGTR--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTEE--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCce--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 9999999 45568999999877655432 222345678999997632 368889999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCC
Q 009091 293 VPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKR 342 (544)
Q Consensus 293 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 342 (544)
..||........... .+. ... .+++.++.||..+|++||.+|
T Consensus 247 ~lPf~~~~~~~~~~~------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence 999975543221111 111 111 578999999999999999988
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=180.69 Aligned_cols=144 Identities=18% Similarity=0.157 Sum_probs=112.1
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChh-----------------------cHHHHHHHHHHHHhccCCC
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ-----------------------DREDIKREIQIMQHLSGQQ 155 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~~h~ 155 (544)
...||+|++|.||+|.+. +|+.||||++......... ....+.+|...+.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 467999999999999987 8999999998764211000 0123468999999997 78
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCC
Q 009091 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 156 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~ 234 (544)
+|.....+.... .+|||||++|+++.........++...+..++.|++.++.++|+ .||+||||||+|||++ +
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~----~ 153 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH----D 153 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----C
Confidence 775443333222 47999999988665443445678889999999999999999999 9999999999999996 3
Q ss_pred ccEEEeecCCcccccC
Q 009091 235 AMLKATDFGLSVFIDE 250 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~ 250 (544)
+.++|+|||++.....
T Consensus 154 ~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 GKPYIIDVSQAVELDH 169 (190)
T ss_pred CCEEEEEcccceecCC
Confidence 4699999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=161.37 Aligned_cols=145 Identities=32% Similarity=0.561 Sum_probs=134.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~ 470 (544)
..+++++.++++..|..||.+++|+|+..||..+++++|..+...++.+++..+|.++.|.|+|++|+..+.... ..++
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt 104 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT 104 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc
Confidence 356778888999999999999999999999999999999999999999999999999999999999998865432 3458
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.++++.+|+.+|.|++|+||..+|+.+...+|.. +++++.+||.++|.++||.|+-+||..+|++.
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 8999999999999999999999999999999999 99999999999999999999999999999874
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-23 Score=215.58 Aligned_cols=245 Identities=21% Similarity=0.316 Sum_probs=175.1
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccc-cChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL-VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
.|...+.||.+.|=+|.+|++. ...|+||++.+... .+-....+...|++ . .+..+||++.+.-+-......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~-~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIK-F-ALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHH-H-HhhcCCcccchHHHHHhhHHHHHH
Confidence 4777889999999999999876 34599999977652 22223333444555 2 333599999987776666777888
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc--CC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID--EG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~--~~ 251 (544)
=+|... +|+|.+..+.-+..-+.+.|+.||+.||.-||..||+|||||.+||||+.-+ .+.|+||..-+... +.
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWN---W~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWN---WLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeec---hhhhhcccccCCccCCCC
Confidence 888854 9999998888888999999999999999999999999999999999997655 68999998766432 11
Q ss_pred C--ce----ecccCCccccCcccccc-----------c-CCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCC
Q 009091 252 K--VY----RDIVGSAYYVAPEVLRR-----------S-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312 (544)
Q Consensus 252 ~--~~----~~~~gt~~y~aPE~~~~-----------~-~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~ 312 (544)
+ .. .+...-.+|.|||.+.. . .+++-||||+||+++||++ |++||.- ..++ ....+.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~-aYr~~~ 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQLL-AYRSGN 251 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HHHH-hHhccC
Confidence 1 11 12223357999997631 1 4678899999999999988 6777721 1111 111111
Q ss_pred ccCCCCcc-cCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 313 VDFESEPW-LLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 313 ~~~~~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
...+.... .--+..++.||..|++.||.+|.+|++.|+.
T Consensus 252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 00000000 0114467999999999999999999999875
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-22 Score=181.41 Aligned_cols=239 Identities=20% Similarity=0.255 Sum_probs=181.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
..+..+|.....|+.|++++. |..+++|++.-.... ......|..|.-.|+-+. ||||+.++++|..+.++.++..
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 345567889999999999987 556777877443322 223346778888888887 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcC-CEee-cCCCCceeeecCCCCccEEE--eecCCccccc
Q 009091 176 LCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMG-VMHR-DLKPENFLLSNKDGGAMLKA--TDFGLSVFID 249 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~-ivHr-Dikp~Nill~~~~~~~~vkl--~Dfg~a~~~~ 249 (544)
||+.|+|+..|..... ....++.+++.++++|++|||+.. ++-| -|....|++ +.+.+.+| +|--++.+.
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarismad~kfsfqe- 343 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISMADTKFSFQE- 343 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheecccceeeeec-
Confidence 9999999999987654 567888999999999999999863 4433 678888999 44444443 343332211
Q ss_pred CCCceecccCCccccCccccccc----CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLRRS----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
....-+|.||+||.+... .-.++|+|||+++||||.|+..||...+..+.-..+--.+.....+| .++.
T Consensus 344 -----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ipp--gis~ 416 (448)
T KOG0195|consen 344 -----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPP--GISR 416 (448)
T ss_pred -----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCC--CccH
Confidence 123457899999998643 24578999999999999999999988777665444444444444433 6899
Q ss_pred HHHHHHHHhcccCcCCCCChhhhh
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell 349 (544)
.+..|+.-|+..||.+||.+..++
T Consensus 417 hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceeh
Confidence 999999999999999999987753
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=182.09 Aligned_cols=190 Identities=27% Similarity=0.400 Sum_probs=141.8
Q ss_pred cCCCCeeEEEEEEEe---------------------------CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHH
Q 009091 152 SGQQNIVEFRGAYED---------------------------RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204 (544)
Q Consensus 152 ~~h~~iv~~~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql 204 (544)
..|||||++.++|.+ +..+|+||.-++. +|..++..+ ..+....+-++.|+
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQL 350 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHH
Confidence 369999999887732 2368999998854 999998765 46667778889999
Q ss_pred HHHHHHHHHcCCEeecCCCCceeeecC-CCCccEEEeecCCcccccCC----Cc---eecccCCccccCcccccc---c-
Q 009091 205 VNVVHHCHFMGVMHRDLKPENFLLSNK-DGGAMLKATDFGLSVFIDEG----KV---YRDIVGSAYYVAPEVLRR---S- 272 (544)
Q Consensus 205 ~~~l~~lH~~~ivHrDikp~Nill~~~-~~~~~vkl~Dfg~a~~~~~~----~~---~~~~~gt~~y~aPE~~~~---~- 272 (544)
++|+.|||++||.|||+|.+|||+--+ |....+.|+|||.+-.-... .. .-...|....||||+... +
T Consensus 351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~ 430 (598)
T KOG4158|consen 351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN 430 (598)
T ss_pred HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence 999999999999999999999999644 34467899999987533221 11 112457788999998752 2
Q ss_pred ---CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHH-HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChh
Q 009091 273 ---YGKEIDVWSAGVILYILLSGVPPFWAETEKGIF-DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA 346 (544)
Q Consensus 273 ---~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 346 (544)
--.++|.|+.|.+.||+++...||++..+..+- ....... ++. -...+++.+++++..+|+.||++|++..
T Consensus 431 avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q--LPa-lp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 431 AVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ--LPA-LPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred eeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh--CCC-CcccCChHHHHHHHHHhcCCccccCCcc
Confidence 135899999999999999999999985443221 1111221 111 1235789999999999999999999964
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=174.01 Aligned_cols=138 Identities=19% Similarity=0.234 Sum_probs=108.1
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc----CCCCeeEEEEEEEeCC---e-E
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS----GQQNIVEFRGAYEDRQ---S-V 170 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~---~-~ 170 (544)
.+.||+|+||.||. +..++.. +||++.... ....+.+.+|+.+++.+. .||||++++++++.+. . +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46799999999995 6666655 689885432 224567899999999994 3899999999998763 4 3
Q ss_pred EEEEec--cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHHHcCCEeecCCCCceeeecCC-CCccEEEeecCCc
Q 009091 171 HLVMEL--CSGGELFDKIIAQGHYTEKAAAALCRAIVNVV-HHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLS 245 (544)
Q Consensus 171 ~lv~e~--~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l-~~lH~~~ivHrDikp~Nill~~~~-~~~~vkl~Dfg~a 245 (544)
.+|||| +.+++|.+++... .+++. ..++.|++.++ +|||+++|+||||||+|||++..+ ....++|+||+.+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 478999 5579999999663 46665 35678888777 999999999999999999997543 3457999995544
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=202.79 Aligned_cols=195 Identities=25% Similarity=0.364 Sum_probs=155.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~ 170 (544)
...|.|.+.||+|+||.||+|.+.. |+.||+|+-+......-.-.. +++.||. --+-|..+..++.-.+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHHHccCCcc
Confidence 4568899999999999999999876 999999987655443222222 2333332 013445555555556777
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC----CCCccEEEeecCCcc
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK----DGGAMLKATDFGLSV 246 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~----~~~~~vkl~Dfg~a~ 246 (544)
+||+||.+.|||.+++...+.+++..+..++.|++..|++||..+|||+||||+|+||... ....-++|+|||.+.
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 8999999999999999988889999999999999999999999999999999999999532 224569999999987
Q ss_pred cc---cCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCC
Q 009091 247 FI---DEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVP 294 (544)
Q Consensus 247 ~~---~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~ 294 (544)
.+ .++......++|-.+-.+|+.. .+|++.+|.|.|+.+++-|+.|++
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 54 3444556678999999999886 579999999999999999999864
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.3e-20 Score=163.23 Aligned_cols=146 Identities=34% Similarity=0.589 Sum_probs=132.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc-ccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR-YRLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~ 470 (544)
..+++.+++++..+|..+|.+++|.|+.+||..++..++...+..++..+|..+|.+++|.|+|+||+..+... .....
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 88 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP 88 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence 35778899999999999999999999999999999999988899999999999999999999999998876543 23345
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.+|.+++|+|+.+||..++..+|.. ++.+++.+|..+|.|++|.|+|+||+.+|.+.+
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 156 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKTN 156 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccc
Confidence 6789999999999999999999999999999987 889999999999999999999999999988743
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=147.91 Aligned_cols=151 Identities=25% Similarity=0.463 Sum_probs=136.6
Q ss_pred HHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 385 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
..-+.+-..|++.+|+++++.|..+|.|+||.|+.++|+..+..+|...+++++..|++. ..|.|+|.-|+..+-.
T Consensus 17 rasSnvFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGe 92 (171)
T KOG0031|consen 17 RASSNVFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGE 92 (171)
T ss_pred cccchHHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHH
Confidence 334445567899999999999999999999999999999999999999999999999996 5789999999988766
Q ss_pred ccc-ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCCC
Q 009091 465 RYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539 (544)
Q Consensus 465 ~~~-~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 539 (544)
... .+.++.|..+|+.||.+++|+|..+.|+.+|...|.. ++++++.|++.+-.|..|.|+|.+|+.++.++..+
T Consensus 93 kL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG~~~ 169 (171)
T KOG0031|consen 93 KLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHGEKD 169 (171)
T ss_pred HhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHccccc
Confidence 554 3456789999999999999999999999999999998 99999999999999999999999999999987653
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-19 Score=160.14 Aligned_cols=144 Identities=40% Similarity=0.702 Sum_probs=130.6
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~ 470 (544)
..+++++++++...|..+|.+++|.|+.+||..++..++..++.+++..+|..+|.+++|.|+|+||+..+.... ....
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~ 82 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS 82 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH
Confidence 457788899999999999999999999999999999999888899999999999999999999999998775432 2334
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.+..+|+.+|.+++|+|+.+||+.++..+|.. ++++++.++..+|.+++|.|+|+||+.+|..
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 5678999999999999999999999999999887 8899999999999999999999999998864
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=171.65 Aligned_cols=148 Identities=21% Similarity=0.182 Sum_probs=114.2
Q ss_pred cceecceecccCCeEEEEEE-ECCCCCeEEEEEEeeccccCh---------------------hcHHHHHHHHHHHHhcc
Q 009091 95 FYTLGKELGRGQFGITYLCT-ENSTGNSYACKSILKRKLVNK---------------------QDREDIKREIQIMQHLS 152 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~avK~~~~~~~~~~---------------------~~~~~~~~E~~~l~~l~ 152 (544)
-|.+.+.||+|++|.||+|. +..+|..||+|++........ .....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 677899999999865431100 01134578999999997
Q ss_pred C-CCCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC-CEeecCCCCceeeec
Q 009091 153 G-QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG-VMHRDLKPENFLLSN 230 (544)
Q Consensus 153 ~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-ivHrDikp~Nill~~ 230 (544)
. ...+..++++ ...+|||||++|.+|.........+....+..++.|++.+|.+||+.| |+||||||+||++.
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 2 1234455543 234799999999888766544455667778899999999999999999 99999999999996
Q ss_pred CCCCccEEEeecCCcccccC
Q 009091 231 KDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 231 ~~~~~~vkl~Dfg~a~~~~~ 250 (544)
...++|+|||.+.....
T Consensus 184 ---~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 184 ---DGKVVIIDVSQSVELDH 200 (237)
T ss_pred ---CCCEEEEEChhhhccCC
Confidence 34699999999875443
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-19 Score=178.52 Aligned_cols=224 Identities=25% Similarity=0.339 Sum_probs=166.2
Q ss_pred HhccCCCCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCC-EeecCCCCce
Q 009091 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGV-MHRDLKPENF 226 (544)
Q Consensus 149 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~i-vHrDikp~Ni 226 (544)
+.+. |.|+.+++|.+.++...++|.+||..|+|.+.+.. .-.+.......++++++.||.|+|...| .|+.+++.|.
T Consensus 2 ~~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred cccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 4565 99999999999999999999999999999999987 4457888889999999999999998876 9999999999
Q ss_pred eeecCCCCccEEEeecCCcccccCC---CceecccCCccccCccccccc--------CCCcchHHHHHHHHHHHhhCCCC
Q 009091 227 LLSNKDGGAMLKATDFGLSVFIDEG---KVYRDIVGSAYYVAPEVLRRS--------YGKEIDVWSAGVILYILLSGVPP 295 (544)
Q Consensus 227 ll~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~DiwslG~~l~el~tg~~p 295 (544)
++ +..+.+||+|||+....... .......-...|.|||+++.. .+.+.||||||++++|+++...|
T Consensus 81 lv---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 81 LV---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ee---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99 77789999999998766421 111112234569999998643 46679999999999999999999
Q ss_pred CCCCC----hHHHHHHHHhCCccCCCCc-c--cCCCHHHHHHHHHhcccCcCCCCChhhhhC-CCccccCCCCCCCcccH
Q 009091 296 FWAET----EKGIFDAILKGGVDFESEP-W--LLISDSAKDLVRKMLIQDPKKRITSAEVLE-HPWMREGGEASDKPIGS 367 (544)
Q Consensus 296 f~~~~----~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~-hp~f~~~~~~~~~~~~~ 367 (544)
|.... ..++...+.++......|. + ...++++..++..||..+|..||+++++-. -..+..... .+..+.+
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~-~~~nl~D 236 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGS-SKGNLMD 236 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccccc-ccchhHH
Confidence 97632 2344445444222211111 1 135667999999999999999999998743 222222111 2224456
Q ss_pred HHHHHHHHHH
Q 009091 368 AVLSRMKQFR 377 (544)
Q Consensus 368 ~~~~~l~~~~ 377 (544)
..+..|.++.
T Consensus 237 ~m~~~le~Y~ 246 (484)
T KOG1023|consen 237 SLFRMLESYA 246 (484)
T ss_pred HHHHHHHHHH
Confidence 6666777655
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-20 Score=184.13 Aligned_cols=204 Identities=25% Similarity=0.370 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHhccCCCCeeEEE------EEEE-----eCCeEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHH
Q 009091 139 EDIKREIQIMQHLSGQQNIVEFR------GAYE-----DRQSVHLVMELCSGGELFDKIIAQGH---YTEKAAAALCRAI 204 (544)
Q Consensus 139 ~~~~~E~~~l~~l~~h~~iv~~~------~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql 204 (544)
....+++..+.-..+|++.+..- ..+. ...++||.|++|.-.+|.++|..+.. .+....+.++.|+
T Consensus 289 ~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~ 368 (516)
T KOG1033|consen 289 KYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQI 368 (516)
T ss_pred hhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhh
Confidence 34455666665555455444321 1111 13468999999999999999976433 5678889999999
Q ss_pred HHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-------ceecccCCccccCccccc-ccCCCc
Q 009091 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-------VYRDIVGSAYYVAPEVLR-RSYGKE 276 (544)
Q Consensus 205 ~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~-~~~~~~ 276 (544)
..|++| +|.+|||+||.||++..++ .+||+|||+........ ......||..||+||.+. ..|+.+
T Consensus 369 ~~~~~y---k~~ihrdlkp~nif~~~d~---q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k 442 (516)
T KOG1033|consen 369 APAVEY---KGLIHRDLKPSNIFFSDDD---QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK 442 (516)
T ss_pred ccchhh---ccchhhhccccccccccch---hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhh
Confidence 999999 9999999999999996544 69999999988765544 345578999999999987 569999
Q ss_pred chHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 277 IDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 277 ~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
+||||||++|+|+++ -..+|. ....+..+..+.++ ...+.. -+.-..|+.+||.+.|.+||++.+.--|+|.
T Consensus 443 vdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~g~ip--~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 443 VDIYALGLILAELLIQFSTQFE---RIATLTDIRDGIIP--PEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred cchhhHHHHHHHHHHHhccHHH---HHHhhhhhhcCCCC--hHHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999998 333332 12233444444332 111222 2345789999999999999988877777775
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-20 Score=198.62 Aligned_cols=258 Identities=30% Similarity=0.474 Sum_probs=206.3
Q ss_pred ceecceecccCCeEEEEEEECC-CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENS-TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
|.+.+.||+|+|+.|-++.... ....+|+|.+.... ........+..|..+-..+.+|.|++.+++.....+..++++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 7777889999999998877633 34456666553322 233444556678888888878999999999999999999999
Q ss_pred eccCCCChHHHH-HHcC-CCCHHHHHHHHHHHHHHHHHHH-HcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-
Q 009091 175 ELCSGGELFDKI-IAQG-HYTEKAAAALCRAIVNVVHHCH-FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE- 250 (544)
Q Consensus 175 e~~~~~~L~~~l-~~~~-~~~~~~~~~~~~ql~~~l~~lH-~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~- 250 (544)
+|..|+++.+.+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.+++..+. .+++.|||+|.....
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~--~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS--ALKIADFGLATAYRNK 178 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC--cccCCCchhhcccccc
Confidence 999999999888 5544 6788889999999999999999 999999999999999954432 799999999987654
Q ss_pred CC---ceecccC-CccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHhCCccCCCCcccCC
Q 009091 251 GK---VYRDIVG-SAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGI-FDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 251 ~~---~~~~~~g-t~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 323 (544)
.. .....+| ++.|+|||...+ ......|+||+|+++.-+++|..||........ +.........+...+|..+
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI 258 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence 21 2234578 999999998765 467889999999999999999999976544332 2222333333345667788
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+....+++.+++..+|..|.+.+++-.+||+..
T Consensus 259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ChhhhhcccccccCCchhccccccccccccccc
Confidence 999999999999999999999999999999987
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-18 Score=159.07 Aligned_cols=137 Identities=29% Similarity=0.382 Sum_probs=111.4
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh-----hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-----QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
+.||+|++|.||+|.+ .+..+++|+......... .....+.+|+.++..+. |++|+....++...+..+++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999986 577899997653322111 12345778999999997 888877666666777889999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
||++|++|.+.+..... ....++.+++.+|.++|+.|++|||++|.|||+. ...++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 99999999998865432 7788999999999999999999999999999996 34699999998864
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-18 Score=138.44 Aligned_cols=141 Identities=23% Similarity=0.403 Sum_probs=125.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC--CCceeeehhhhhhhhc---cccc
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD--GNGTIDYIEFISATMH---RYRL 468 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~eF~~~~~~---~~~~ 468 (544)
++.++..+++++|..||..+||+|+..++...|+++|.++++.++.+....++.+ +-.+|+|++|+..+.. ....
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q 84 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ 84 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence 5566778999999999999999999999999999999999999999999999877 5589999999987654 3334
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.-+.++.||++++|+|...||+++|..+|.. ++++++.++.-. .|.+|.|+|+.|++.+.+
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIMS 151 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHhc
Confidence 566888899999999999999999999999999999 999999888754 477899999999998875
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-18 Score=175.24 Aligned_cols=264 Identities=20% Similarity=0.229 Sum_probs=206.3
Q ss_pred CCcccccccceecceecc--cCCeEEEEEEE--CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEE
Q 009091 87 KPLEDIRQFYTLGKELGR--GQFGITYLCTE--NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG 162 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~--G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 162 (544)
...+.+.+.+.+...+|. |.+|.||.+.. ..++..+|+|.-... ........+-.+|+...+++.-|+|.++.+.
T Consensus 107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~ 185 (524)
T KOG0601|consen 107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSP 185 (524)
T ss_pred CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCc
Confidence 344555677888899999 99999999988 888999999974222 2233344445678888888888999999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHH----HHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVN----VVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~ql~~----~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
.|+..+..++-+|+| +.+|..+...... +++..++..+.+... ||.++|..+++|-|+||.||++..+. ...
T Consensus 186 ~~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~--~s~ 262 (524)
T KOG0601|consen 186 AWEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW--TSC 262 (524)
T ss_pred ccccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc--cee
Confidence 999999999999999 5688888876555 899999999999999 99999999999999999999995442 568
Q ss_pred EEeecCCcccccCCCcee------cccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC
Q 009091 238 KATDFGLSVFIDEGKVYR------DIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~ 311 (544)
+++|||+...+.+..... ...|...|++||++++-++...|||++|.+..+..++..++......... .+ +.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-~~-r~ 340 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-QL-RQ 340 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-cc-cc
Confidence 999999998887654222 22578889999999999999999999999999999987665433111111 00 11
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+ .+.......+.++...+..|++.+|-.|++++.+++|+++.+.
T Consensus 341 ~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 341 GY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred cc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 11 1222222346677779999999999999999999999998754
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.6e-18 Score=155.65 Aligned_cols=140 Identities=21% Similarity=0.262 Sum_probs=107.2
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh-------------------hcHHHHHHHHHHHHhccCCC-
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-------------------QDREDIKREIQIMQHLSGQQ- 155 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~~h~- 155 (544)
|.+.+.||+|+||.||++... +|+.||||++........ .......+|+.++..+. ++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 788899999999999999875 799999998754321000 01123567899999986 55
Q ss_pred -CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCC
Q 009091 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 156 -~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~ 234 (544)
.++..++. +..++||||++|++|...... .....++.+++.++.++|+.||+||||||+||+++ .+
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~~ 161 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---DD 161 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---CC
Confidence 44444432 445899999999988764321 34567889999999999999999999999999994 34
Q ss_pred ccEEEeecCCcccccC
Q 009091 235 AMLKATDFGLSVFIDE 250 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~ 250 (544)
..++|+|||++.....
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 5799999999976544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.5e-18 Score=155.29 Aligned_cols=134 Identities=24% Similarity=0.307 Sum_probs=104.3
Q ss_pred eecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 101 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
.||+|++|.||++.. ++..+++|+........ ......+.+|+.++..+. |+++.....++...+..++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 389999999999984 57889999865432211 112356778999999997 6655444444445666789999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
|++|++|.+.+..... .++.+++.+|.+||+.|++|+|++|.|||+. ...++++|||++...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence 9999999987754321 7899999999999999999999999999996 346999999998653
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.6e-18 Score=149.35 Aligned_cols=144 Identities=31% Similarity=0.502 Sum_probs=120.2
Q ss_pred hhhhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCce-eeehhhhhhhhcccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT-IDYIEFISATMHRYRLE 469 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~-i~~~eF~~~~~~~~~~~ 469 (544)
..|+.+|+..+...|.++|.+ ++|+|+.+||..+.. +..+ --..++++.+|.+++|. |+|++|+..+.......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~~N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~ 100 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE-LALN---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA 100 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH-HhcC---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence 448999999999999999999 999999999999883 3322 23567888888888888 99999999987766554
Q ss_pred ch-HHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-C-C------HHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCCC
Q 009091 470 RD-EHLYKAFQYFDKDNSGYITRDELETAMKDYGI-G-D------EASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539 (544)
Q Consensus 470 ~~-~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-~-~------~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 539 (544)
.. ++++.+|+.||.+++|+|+.+||..++..+-. . + ++.++.+|.++|.|+||.|+|+||.+++.+.+..
T Consensus 101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~ 179 (187)
T KOG0034|consen 101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDL 179 (187)
T ss_pred cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccH
Confidence 44 49999999999999999999999999987633 2 2 2345678899999999999999999999887543
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-17 Score=176.17 Aligned_cols=140 Identities=20% Similarity=0.255 Sum_probs=111.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
..|...+.||+|+||+||++.+. +..+++|+........ ....+.+.+|+.+++.+. |++|+....++....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPE 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCC
Confidence 44567899999999999999865 3445555443222111 122356889999999998 899988777777777
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
..++||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+. + ..++|+|||+++..
T Consensus 410 ~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~---~~~~liDFGla~~~ 477 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-D---DRLYLIDFGLGKYS 477 (535)
T ss_pred CCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-C---CcEEEEeCcccccC
Confidence 7899999999999998875 3567899999999999999999999999999993 2 36999999998754
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.8e-17 Score=148.43 Aligned_cols=141 Identities=20% Similarity=0.259 Sum_probs=100.1
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHH---------------------HHHHHHHHHhccCC-CC
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED---------------------IKREIQIMQHLSGQ-QN 156 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~---------------------~~~E~~~l~~l~~h-~~ 156 (544)
++.||+|+||+||+|.+. +++.||||++............. ...|...+.++.++ -.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999977 79999999986543221111111 14567777777522 23
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCChHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCC
Q 009091 157 IVEFRGAYEDRQSVHLVMELCSGGELFD-KIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 157 iv~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~ 234 (544)
+...++. ...++||||++|+++.. .+... .. ...+..++.+++.++.++|. .||+||||||+||+++ +
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~ 150 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----D 150 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----C
Confidence 4555543 24589999999854322 11111 11 16678899999999999999 9999999999999996 3
Q ss_pred ccEEEeecCCcccccC
Q 009091 235 AMLKATDFGLSVFIDE 250 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~ 250 (544)
..++|+|||.+.....
T Consensus 151 ~~~~liDfg~a~~~~~ 166 (187)
T cd05119 151 GKVYIIDVPQAVEIDH 166 (187)
T ss_pred CcEEEEECcccccccC
Confidence 4699999999976544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=141.41 Aligned_cols=146 Identities=29% Similarity=0.435 Sum_probs=124.5
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCC-CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccccc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE 469 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~ 469 (544)
.+.|+..+++.+++-|.. ....|.++.++|+.++..+.. .-...-.+.+|+.+|.|+||.|+|.||+..+.......
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt 97 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGT 97 (193)
T ss_pred hcCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCc
Confidence 357888888888888876 346899999999999999875 34455688999999999999999999999998888888
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CC-------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDY----GI-------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~-------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.++.++.+|+.||.||||+|+.+|+..++... |. . .++-++.+|+.+|.|+||.||++||+..+.+.+
T Consensus 98 ~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 98 LEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred HHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 88999999999999999999999998887653 32 1 356688899999999999999999999887764
Q ss_pred C
Q 009091 538 P 538 (544)
Q Consensus 538 ~ 538 (544)
.
T Consensus 178 ~ 178 (193)
T KOG0044|consen 178 S 178 (193)
T ss_pred H
Confidence 4
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.9e-16 Score=145.60 Aligned_cols=139 Identities=19% Similarity=0.279 Sum_probs=103.6
Q ss_pred cceec-ccCCeEEEEEEECCCCCeEEEEEEeeccc----c------ChhcHHHHHHHHHHHHhccCCCCe--eEEEEEEE
Q 009091 99 GKELG-RGQFGITYLCTENSTGNSYACKSILKRKL----V------NKQDREDIKREIQIMQHLSGQQNI--VEFRGAYE 165 (544)
Q Consensus 99 ~~~lg-~G~~g~Vy~~~~~~~~~~~avK~~~~~~~----~------~~~~~~~~~~E~~~l~~l~~h~~i--v~~~~~~~ 165 (544)
+..|| .|+.|+||.+... +..++||.+..... . .......+.+|+.++.+|. |++| +..+++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~ 112 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARV 112 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeee
Confidence 35687 8889999998764 77899998854321 0 1123456788999999997 7664 66666643
Q ss_pred eC-C---eEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 166 DR-Q---SVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 166 ~~-~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.. + ..++|||+++| .+|.+++.. ..+++.. +.+++.+|.+||+.||+||||||.|||++.+ ..++|+
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~---~~v~LI 184 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPD---GKFWLI 184 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCC---CCEEEE
Confidence 32 2 23599999997 688887754 4555543 5688999999999999999999999999543 369999
Q ss_pred ecCCcccc
Q 009091 241 DFGLSVFI 248 (544)
Q Consensus 241 Dfg~a~~~ 248 (544)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988653
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.6e-16 Score=135.63 Aligned_cols=129 Identities=26% Similarity=0.396 Sum_probs=117.4
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
.+...|+..|+|+.|.|+.+|++.+|... ...++.+.++.|+..+|.+.+|+|+|+||..++. ....++.+|+
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~------~i~~Wr~vF~ 131 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWK------YINQWRNVFR 131 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH------HHHHHHHHHH
Confidence 46778999999999999999999999964 4667889999999999999999999999987664 3467999999
Q ss_pred hhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 480 YFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.||+|++|.|+..||+.+|..+|.. +++..+.+++.+|.-++|.|.|++|+.++..
T Consensus 132 ~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 132 TYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred hcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 9999999999999999999999999 8889999999999888999999999998763
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=132.39 Aligned_cols=133 Identities=23% Similarity=0.316 Sum_probs=109.6
Q ss_pred ecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCCeEEEEEec
Q 009091 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-QNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 98 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
+.+.||.|.++.||++.... ..+++|.+..... ...+.+|+.+++.+.++ .++++++.+....+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35679999999999999753 7899998743221 46788999999999844 6899999988888889999999
Q ss_pred cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 177 ~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
++|+.+..+ +......++.+++.+|.++|.. +++|+|++|+|||++. ...++++|||.+..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEEEecccccC
Confidence 998777543 5566778899999999999985 7999999999999964 35799999998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.8e-16 Score=164.73 Aligned_cols=258 Identities=27% Similarity=0.429 Sum_probs=200.3
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
+.+.+-+-+|+++.++.+.-..+|...+.|+............+....+-.++-... +|.+++....+......+|+++
T Consensus 806 ~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~-~P~v~~~~~s~~~rsP~~L~~~ 884 (1205)
T KOG0606|consen 806 FEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPR-SPAVVRSFPSFPCRSPLPLVGH 884 (1205)
T ss_pred ceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCC-CCceecccCCCCCCCCcchhhH
Confidence 566678889999999988877777666666553322222333334444444433232 6777776666667788999999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC----
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG---- 251 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~---- 251 (544)
|+.|++|...|...+..+....+.+...+..++++||...+.|||++|.|+|+.. .+..++.|||........
T Consensus 885 ~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~---~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 885 YLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAY---DGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred HhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcc---cCCcccCccccccccccccCcC
Confidence 9999999999998888888888889999999999999999999999999999944 456889999843322100
Q ss_pred ----------------------------CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH
Q 009091 252 ----------------------------KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302 (544)
Q Consensus 252 ----------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~ 302 (544)
.......||+.|.+||.+. ......+|+|++|++++|.++|..||......
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 0011246899999999765 56888999999999999999999999999999
Q ss_pred HHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChh---hhhCCCccccCC
Q 009091 303 GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA---EVLEHPWMREGG 358 (544)
Q Consensus 303 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~---ell~hp~f~~~~ 358 (544)
..++++......++..+ ...+.++++++..+|..+|.+|..+. ++-.|+||+...
T Consensus 1042 ~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1042 QIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred hhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 99999888776665544 34689999999999999999999998 888999998653
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-14 Score=137.17 Aligned_cols=137 Identities=26% Similarity=0.460 Sum_probs=122.7
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHH
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~ 473 (544)
+++-..++..+|+.||.+++|.++.+++.+.+.++... ...+-+..+|+..|.|.||.++|.||...+. ..+.+
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~~ 83 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKELE 83 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhHHH
Confidence 33444578899999999999999999999999998776 6677789999999999999999999986553 35667
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+..+|..+|.++||.|+.+|+...|+.+|.. +++++..+|+.+|+++++.|+++||...+.--
T Consensus 84 l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~ 147 (463)
T KOG0036|consen 84 LYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY 147 (463)
T ss_pred HHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC
Confidence 8999999999999999999999999999999 99999999999999999999999999887643
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.1e-13 Score=122.06 Aligned_cols=143 Identities=13% Similarity=0.129 Sum_probs=103.0
Q ss_pred ceecccCCeEEEEEEECC------CCCeEEEEEEeecccc----------C---------hhcHHHHH----HHHHHHHh
Q 009091 100 KELGRGQFGITYLCTENS------TGNSYACKSILKRKLV----------N---------KQDREDIK----REIQIMQH 150 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~------~~~~~avK~~~~~~~~----------~---------~~~~~~~~----~E~~~l~~ 150 (544)
-.||.|.-+.||.|.... .+..+|||+++-.... . ......+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998553 3579999988532210 0 01122333 89999999
Q ss_pred ccCC-CCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHcCCEeecCCCCceee
Q 009091 151 LSGQ-QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC-HFMGVMHRDLKPENFLL 228 (544)
Q Consensus 151 l~~h-~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~l-H~~~ivHrDikp~Nill 228 (544)
+... -+++..+++ ...+|||||+.+..+.........++...+..+..+++.+|..| |+.||||+||++.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 8733 456677654 45579999997654432222233456667778889999999998 89999999999999999
Q ss_pred ecCCCCccEEEeecCCcccccC
Q 009091 229 SNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 229 ~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
.. +.+.|+|||.+.....
T Consensus 159 ~~----~~v~iIDF~qav~~~h 176 (197)
T cd05146 159 HD----GKVWFIDVSQSVEPTH 176 (197)
T ss_pred EC----CcEEEEECCCceeCCC
Confidence 53 2599999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.9e-13 Score=139.21 Aligned_cols=155 Identities=19% Similarity=0.219 Sum_probs=100.9
Q ss_pred CCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh-------------------------------
Q 009091 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK------------------------------- 135 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~------------------------------- 135 (544)
.+.+.+-..|. .+.||.|++|.||+|+.+ +|+.||||+..+.....-
T Consensus 111 ~~~~~~F~~fd-~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (437)
T TIGR01982 111 GPLEELFAEFE-EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVK 188 (437)
T ss_pred cCHHHHHhhCC-CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHH
Confidence 33333333344 367999999999999975 689999999854321000
Q ss_pred hcHH------HHHHHHHHHHhcc----CCCCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHH
Q 009091 136 QDRE------DIKREIQIMQHLS----GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAI 204 (544)
Q Consensus 136 ~~~~------~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql 204 (544)
.... .+.+|...+.++. ++++|.-..-++......+|||||++|++|.+..... .... ...++..+
T Consensus 189 e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~ 265 (437)
T TIGR01982 189 EFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENL 265 (437)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHH
Confidence 0000 2445666555553 3444432222233345578999999999998876432 1222 23455555
Q ss_pred HH-HHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 205 VN-VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 205 ~~-~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+. .+..+|..|++|+|+||.||++. .++.++|+|||++..+.
T Consensus 266 ~~~~l~ql~~~g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 266 ARSFLNQVLRDGFFHADLHPGNIFVL---KDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHhCCceeCCCCcccEEEC---CCCcEEEEeCCCeeECC
Confidence 55 46788999999999999999994 34579999999987654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-14 Score=148.01 Aligned_cols=157 Identities=19% Similarity=0.284 Sum_probs=101.6
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc--------------------C-------h---
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV--------------------N-------K--- 135 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--------------------~-------~--- 135 (544)
+.+.+.+-..|.. +.||.|++|.||+|+.+.+|+.||||+..+.... . .
T Consensus 112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v 190 (537)
T PRK04750 112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVV 190 (537)
T ss_pred CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHH
Confidence 4455555556776 7899999999999999888999999999654210 0 0
Q ss_pred -hcHHH------HHHHHHHHHhcc---CCCCeeEEEEEE-EeCCeEEEEEeccCCCChHHH--HHHcC----CCCHHHHH
Q 009091 136 -QDRED------IKREIQIMQHLS---GQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDK--IIAQG----HYTEKAAA 198 (544)
Q Consensus 136 -~~~~~------~~~E~~~l~~l~---~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~--l~~~~----~~~~~~~~ 198 (544)
+..+. +.+|+..+.++. .+.+.+.+-.++ +.....+|||||++|+.+.+. +...+ .+.+..+.
T Consensus 191 ~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~ 270 (537)
T PRK04750 191 AEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVE 270 (537)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHH
Confidence 11122 334444444443 122233333333 235567899999999999764 33332 13334444
Q ss_pred HHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC-CCccEEEeecCCcccccC
Q 009091 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 199 ~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~-~~~~vkl~Dfg~a~~~~~ 250 (544)
.++.|+ ...|++|+|+||.||++..++ ..+.++++|||++..++.
T Consensus 271 ~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 444444 458999999999999996542 224799999999877654
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.8e-13 Score=114.23 Aligned_cols=147 Identities=21% Similarity=0.248 Sum_probs=108.9
Q ss_pred ecceecccCCeEEEEEEECCCCCeEEEEEEeeccc-----cChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL-----VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 98 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
....|-+|+-+.|+++.+. |+.++||.=..... ...-...+.++|+.+|.++. --.|.--.-++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 4567889999999999865 77777774322222 12233466789999999987 3344333334445566679
Q ss_pred EEeccCC-CChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 173 VMELCSG-GELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 173 v~e~~~~-~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+|||++| .++.+++... ..........+++.|-+.+.-||..+|+|+||..+||+|.+.+....+.|+|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9999987 4777877653 2233444478899999999999999999999999999999888888889999999853
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.1e-14 Score=140.74 Aligned_cols=251 Identities=19% Similarity=0.186 Sum_probs=185.6
Q ss_pred cccceecceecccCCeEEEEEEEC-CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN-STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
...|.++..||.|.|+.|+.+... .++..|++|...+.......+ ..-..|+-+...+.-|.+++.+...|......|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 445788899999999999987755 677789999775544332222 223467777777777899999888888878888
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|-.|||+++++...+.....+.+...+.+..|++.++.++|+..++|+|+||+||++..++ +..++.|||....+.-
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~- 419 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAF- 419 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccccce-
Confidence 9999999998877665555688888999999999999999999999999999999997644 6789999999864221
Q ss_pred CceecccCCccccC-ccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 252 KVYRDIVGSAYYVA-PEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 252 ~~~~~~~gt~~y~a-PE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
......+..+++| +|++. ..+..+.|++|||.-+.+.+++...-+.... ...+..+..... ......+.
T Consensus 420 -~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p~~----~~~~~~~q 491 (524)
T KOG0601|consen 420 -SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTPNL----PGLKLQLQ 491 (524)
T ss_pred -ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccccCC----CchHHhhh
Confidence 1112233445553 55554 3478899999999999999998754332211 122233322211 12347888
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
.+.+.++..++..||.+.++..|.=|.
T Consensus 492 ~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 492 VLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhhhcCCccccchhhhhhcccchhh
Confidence 999999999999999999998876553
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-13 Score=128.11 Aligned_cols=239 Identities=16% Similarity=0.187 Sum_probs=155.9
Q ss_pred EEEEEEECCCCCeEEEEEEeeccccChhc-HHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----CeEEEEEeccCCCCh
Q 009091 109 ITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLSGQQNIVEFRGAYEDR-----QSVHLVMELCSGGEL 182 (544)
Q Consensus 109 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~e~~~~~~L 182 (544)
.||++.+...|.+|+.-.+.......... .+....=...+-.+. |-|||+++.||.+. .+..++.||+..|+|
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlv-HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~ 159 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLV-HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL 159 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHH-HHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence 47788877777766543331111111111 111111122344454 88999999998654 357899999999999
Q ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc--CCEeecCCCCceeeecCCCCccEEEeecCCccccc---C--C
Q 009091 183 FDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFM--GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID---E--G 251 (544)
Q Consensus 183 ~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~--~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~---~--~ 251 (544)
..+|++. ..+......+|+-||+.||.|||+. -|+|+++..+-|++. .++.||++--.-...-. . .
T Consensus 160 ~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~~ap~s~h~s~~~~~~ 236 (458)
T KOG1266|consen 160 KQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGSVAPDSTHPSVNSTRE 236 (458)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecccCccccchhhhhhhH
Confidence 9999763 4488889999999999999999975 699999999999995 44467754321111000 0 0
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCC-CCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF-WAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......|-++|.+||.=. ...+.++|||+||....+|..+..-- .+.+.-.....+....+... ...-++
T Consensus 237 ~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-------n~lqr~ 309 (458)
T KOG1266|consen 237 AEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-------NGLQRG 309 (458)
T ss_pred hhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-------CccccC
Confidence 0111235678899999643 45677899999999999999887542 22222112222222211111 122367
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+|.+||+..|+.||++.++|.||-+-+.+
T Consensus 310 ~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 310 SITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred cCcccccCCCCCCcchhhhhcCceeeecc
Confidence 89999999999999999999999876654
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.3e-13 Score=123.41 Aligned_cols=140 Identities=24% Similarity=0.341 Sum_probs=115.4
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-------cccc
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-------RLER 470 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-------~~~~ 470 (544)
..+++..+|..+|.++||.|+..|+..++..........+..+-|..+|.|+||.|+|+|+...+.... ....
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~ 154 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEED 154 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchh
Confidence 445788999999999999999999999999987777778889999999999999999999988776431 0011
Q ss_pred ---h----HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 ---D----EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ---~----~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
. -.-+..|++.|.|+||.++.+||..+|..-... .+-.+.+.+..+|+|+||.|+++||+.-|-...
T Consensus 155 ~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 155 NEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHE 230 (325)
T ss_pred cHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhcc
Confidence 1 123458999999999999999999998654333 556788899999999999999999998887654
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.9e-12 Score=110.05 Aligned_cols=135 Identities=25% Similarity=0.304 Sum_probs=98.2
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh-----hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-----QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
..+++|+-+.+|.+.+. |..+++|.=.+.....+ -...+..+|+.++.++. --.|..-.-+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 35789999999998654 55566664333222222 22345678999999887 334444333445666777999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||++|..|.+.+... ...++..+-.-+.-||..||+|+||.++||+++.. .+.++|||++...
T Consensus 79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~----~i~~IDfGLg~~s 141 (204)
T COG3642 79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG----RIYFIDFGLGEFS 141 (204)
T ss_pred EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC----cEEEEECCccccc
Confidence 999998888888765 24566777777889999999999999999999653 3899999998743
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-12 Score=117.17 Aligned_cols=128 Identities=17% Similarity=0.175 Sum_probs=94.3
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 179 (544)
+.|+.|.++.||++... +..+++|+..... .....+.+|+.+++.+.+...+++++.... ...++||||++|
T Consensus 4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGT----ELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eecCCcccCceEEEEEC--CeEEEEEeCCCCc----ccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 56889999999999865 7789999764321 112346789999999874434556665543 334799999999
Q ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCC-----EeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGV-----MHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 180 ~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-----vHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.++... .. ....++.+++.+|..||..++ +|+|++|.||+++ +..++++|||.+..
T Consensus 76 ~~l~~~-----~~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE-----DF---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM 136 (170)
T ss_pred Cccccc-----cc---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence 887543 11 123456789999999999885 9999999999996 23589999998753
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-10 Score=118.43 Aligned_cols=183 Identities=16% Similarity=0.206 Sum_probs=132.3
Q ss_pred ceecceecccCCeEEE-EEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 96 YTLGKELGRGQFGITY-LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy-~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
|.+ ...+-++.+ +| .|..+.++.+|.|..++... ....+...+-++-|+.++ ||||+++++.++..+..|||+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEe
Confidence 555 334444444 44 46667788999988875432 233456778889999998 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|-+. .|..++...+ ...+..-+.||+.||.+|| +.+++|++|..+.|++ +..+..||++|.++........
T Consensus 89 ErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~ 160 (690)
T KOG1243|consen 89 ERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNA 160 (690)
T ss_pred eccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCc
Confidence 9984 5666776544 6777888999999999997 6789999999999999 4556799999988765433221
Q ss_pred -eecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCC
Q 009091 254 -YRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGV 293 (544)
Q Consensus 254 -~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~ 293 (544)
.....---.|..|+.+... +-..|.|.|||+++|++.|.
T Consensus 161 ~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 161 PAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCcc
Confidence 0111111235555543211 13569999999999999993
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.2e-12 Score=131.60 Aligned_cols=105 Identities=19% Similarity=0.241 Sum_probs=93.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC-CCCCHHH---HHHHHHhcCCCCCceeeehhhhhhhhcccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETE---VKQLMDAADVDGNGTIDYIEFISATMHRYR 467 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~-~~~~~~~---~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 467 (544)
..|+.++++++++.|..+|.|++|++ +..+++.+| ..+++.+ ++.+|+.+|.|++|.|+|+||+..+.....
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 35677788999999999999999997 888999999 5888887 899999999999999999999988765444
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
...+++++.+|+.||+|++|+|+.+||+.+|..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 456788999999999999999999999999988
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.8e-10 Score=111.49 Aligned_cols=212 Identities=18% Similarity=0.244 Sum_probs=152.7
Q ss_pred CCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE----eCCeEEEEEeccCC-C
Q 009091 106 QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE----DRQSVHLVMELCSG-G 180 (544)
Q Consensus 106 ~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~----~~~~~~lv~e~~~~-~ 180 (544)
-..+.|+|....+|..|++|++...+.... .....-+++++++. |.|||.+.+++. .+..+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 346789999999999999999832221111 12234578899997 999999998876 35679999999987 4
Q ss_pred ChHHHHHH---------------cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 181 ELFDKIIA---------------QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 181 ~L~~~l~~---------------~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
+|.++.-. ....++..+|.++.||..||.++|+.|+.-+-|.|.+||+ .+..+|+|...|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEecccce
Confidence 77776532 1236789999999999999999999999999999999999 55557999888887
Q ss_pred ccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCC-CChHHH-HHHHHhCCccCCCCcccCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWA-ETEKGI-FDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~-~~~~~~-~~~i~~~~~~~~~~~~~~~ 323 (544)
..+..... |.+. --.+-|.=.||.+++.|.||..--+. ...... +..|. ..+
T Consensus 441 Dvl~~d~~-------------~~le--~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~y 494 (655)
T KOG3741|consen 441 DVLQEDPT-------------EPLE--SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTY 494 (655)
T ss_pred eeecCCCC-------------cchh--HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhh
Confidence 66554330 1111 12356888999999999999654221 222222 22221 146
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+.+++++|.-+..-++.+ -++.+++.+
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 889999999988888876 566666543
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.5e-12 Score=116.73 Aligned_cols=130 Identities=24% Similarity=0.374 Sum_probs=103.3
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhC-CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch-----HHHH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD-----EHLY 475 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~-----~~~~ 475 (544)
=++.|+.-|.|+||.++.+||..+|.--- ..+..--+..-+...|+|+||+|+++||+.-++.......+ .+-.
T Consensus 165 De~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere 244 (325)
T KOG4223|consen 165 DEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTERE 244 (325)
T ss_pred HHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHH
Confidence 45689999999999999999998766422 22223346777888999999999999999988765431111 2223
Q ss_pred HHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHH
Q 009091 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531 (544)
Q Consensus 476 ~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~ 531 (544)
..|..+|+|+||+++.+|++.++..-+.. .+.+++.++.+.|.|+||++|++|.+.
T Consensus 245 ~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 245 QFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred HHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 45677899999999999999998877766 788999999999999999999999753
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-11 Score=96.48 Aligned_cols=64 Identities=17% Similarity=0.363 Sum_probs=58.9
Q ss_pred HHHHHHHhhhcc-CCCCcccHHHHHHHHHH-cCCC-CH-HHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDK-DNSGYITRDELETAMKD-YGIG-DE-ASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~-d~dG~Is~~el~~~l~~-~g~~-~~-~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+..+|+.||+ +++|+|+.+||+.+|.. +|.. ++ +++++|++.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 568899999999 99999999999999999 8865 66 89999999999999999999999998864
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.23 E-value=3e-11 Score=89.82 Aligned_cols=61 Identities=46% Similarity=0.831 Sum_probs=53.8
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-----CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-----DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
.++.+|+.+|+|++|+|+.+||+.++..++.. .++.++.+|+.+|.|+||.|+|+||+++|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 37889999999999999999999999999864 33455666999999999999999999875
|
... |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.3e-11 Score=103.14 Aligned_cols=102 Identities=25% Similarity=0.293 Sum_probs=91.2
Q ss_pred HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC------CHHH
Q 009091 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG------DEAS 508 (544)
Q Consensus 435 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~------~~~~ 508 (544)
..++..+|+.+|.|++|.|+-.|+-.++.......+..++..+++.+|.|++|.|+..||..++...+.. ..++
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~e 86 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEE 86 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHH
Confidence 4568899999999999999999998888776667889999999999999999999999999999876543 2459
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 509 IKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 509 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.++|+.+|.|+||.|+.+|+.++|...
T Consensus 87 l~eaF~~fD~d~~G~Is~~el~~~l~~l 114 (151)
T KOG0027|consen 87 LKEAFRVFDKDGDGFISASELKKVLTSL 114 (151)
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHHh
Confidence 9999999999999999999999998864
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-10 Score=91.09 Aligned_cols=64 Identities=16% Similarity=0.447 Sum_probs=58.8
Q ss_pred HHHHHHHhhhc-cCCCC-cccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFD-KDNSG-YITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..++.+|+.|| +||+| +|+.+||+.+|+. +|.. ++++++++++.+|.|+||.|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56889999998 89999 5999999999999 8876 8889999999999999999999999988764
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.7e-10 Score=107.15 Aligned_cols=143 Identities=24% Similarity=0.377 Sum_probs=101.2
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCC-CCeeEEEEEEEeC---CeEEEEEe
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-QNIVEFRGAYEDR---QSVHLVME 175 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~---~~~~lv~e 175 (544)
+.||.|.++.||++.... |..+++|....... ......+.+|+.+++.+..+ .++.+++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGAL--LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCccc--CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998653 67899998643321 11345678999999999742 3467777776553 36789999
Q ss_pred ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 009091 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF------------------------------------------ 213 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~------------------------------------------ 213 (544)
|++|.++.+.+.. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999887664321 345555666666666666666662
Q ss_pred --------------cCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 214 --------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 214 --------------~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..++|+|+++.|||++.. ....+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence 346999999999999653 134688999998753
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.2e-10 Score=95.93 Aligned_cols=108 Identities=23% Similarity=0.292 Sum_probs=88.0
Q ss_pred HHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC-CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc
Q 009091 389 VIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR 467 (544)
Q Consensus 389 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 467 (544)
.++...+..+ +.++|..+|. +.|.|+..+|..++...- .....+++...|+.||.|+||+|+..|.+..+.....
T Consensus 48 ~lg~~~s~~e---i~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge 123 (160)
T COG5126 48 SLGFNPSEAE---INKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGE 123 (160)
T ss_pred HcCCCCcHHH---HHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcc
Confidence 4455555555 5566788887 889999999999888754 5566889999999999999999999999888876666
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
....+++..+++.+|+|+||+|+.+||.+++..
T Consensus 124 ~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 124 RLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred cCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 667788999999999999999999999887653
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.8e-10 Score=91.49 Aligned_cols=143 Identities=20% Similarity=0.376 Sum_probs=101.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCC-----CC------ccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhh
Q 009091 392 EALSEEEIKGLKTMFANMDTDK-----SG------TITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFIS 460 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~-----~G------~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 460 (544)
..|+..++-++..-|..+.++. .| ++..+. ..-+-.+..++-.. ++.+.|..|++|.++|++|+.
T Consensus 20 TFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~-i~kMPELkenpfk~---ri~e~FSeDG~GnlsfddFlD 95 (189)
T KOG0038|consen 20 TFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFEL-IEKMPELKENPFKR---RICEVFSEDGRGNLSFDDFLD 95 (189)
T ss_pred ccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHH-HhhChhhhcChHHH---HHHHHhccCCCCcccHHHHHH
Confidence 3467777777777777665541 11 234333 33334444444443 455566689999999999998
Q ss_pred hhhccc-cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHH----HHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 461 ATMHRY-RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEAS----IKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 461 ~~~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~----~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
.+.-.. ..+.+-++.-+|+.||.|+|++|...+|...+..+... ++++ ++.++.++|.|+||++++.||..++
T Consensus 96 mfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i 175 (189)
T KOG0038|consen 96 MFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVI 175 (189)
T ss_pred HHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 765433 23445567779999999999999999999999887544 5555 4668899999999999999999988
Q ss_pred hcCCC
Q 009091 534 RSGTP 538 (544)
Q Consensus 534 ~~~~~ 538 (544)
...+.
T Consensus 176 ~raPD 180 (189)
T KOG0038|consen 176 LRAPD 180 (189)
T ss_pred HhCcc
Confidence 76543
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-09 Score=102.64 Aligned_cols=239 Identities=16% Similarity=0.168 Sum_probs=155.7
Q ss_pred eecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE-------EeCCe
Q 009091 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY-------EDRQS 169 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-------~~~~~ 169 (544)
..++.||+|+-+.+|-.-.- +. .+.|++.... .. .-.+-+.+|.....||-+-.-+.|- .....
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Pp---pa---~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--RD-QVAKIYHAPP---PA---AQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh--hc-hhheeecCCC---ch---HHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 45678999999999965422 22 3447774432 11 1112345555555566443312211 11223
Q ss_pred EEEEEeccCCCC-hHHHHH---HcC---CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 170 VHLVMELCSGGE-LFDKII---AQG---HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 170 ~~lv~e~~~~~~-L~~~l~---~~~---~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
..++|..++|.. +..++. ++. ......+.+.++.|+.+.+.||..|.+-+|+.++|+|++++ ..|.|+|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~---~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD---SKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC---ceEEEEcc
Confidence 778888887752 222222 122 25567889999999999999999999999999999999654 46888876
Q ss_pred CCcccccCCCceecccCCccccCccccc-c-----cCCCcchHHHHHHHHHHHhhC-CCCCCCCCh----HHHHH-HHHh
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLR-R-----SYGKEIDVWSAGVILYILLSG-VPPFWAETE----KGIFD-AILK 310 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~-----~~~~~~DiwslG~~l~el~tg-~~pf~~~~~----~~~~~-~i~~ 310 (544)
..-....++......+|.+.|.+||.-. + .-+...|.|.||+++++++.| +.||.+-.. ..-.+ .|-.
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 5443334555566678999999999754 2 246779999999999999887 999965311 01111 2211
Q ss_pred CC------------ccCCCCcccCCCHHHHHHHHHhccc--CcCCCCChhh
Q 009091 311 GG------------VDFESEPWLLISDSAKDLVRKMLIQ--DPKKRITSAE 347 (544)
Q Consensus 311 ~~------------~~~~~~~~~~~~~~~~~li~~~l~~--dp~~Rps~~e 347 (544)
+. ......++..+++.+..|+.+|+.. ++.-|||++.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 11 1222335567899999999999985 4678999853
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.8e-10 Score=98.78 Aligned_cols=101 Identities=27% Similarity=0.371 Sum_probs=84.6
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-----------cc
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-----------RL 468 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-----------~~ 468 (544)
.-...+|..||.|+||.|+..||..+|..+-....++.++..|+.+|.|++|.|++.|++.++...+ ..
T Consensus 64 ~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~ 143 (193)
T KOG0044|consen 64 KYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEE 143 (193)
T ss_pred HHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccc
Confidence 3355799999999999999999999999887777888899999999999999999999987763321 11
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
..++....+|+.+|.|+||.||.+||......
T Consensus 144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 13456788999999999999999999886654
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.6e-09 Score=100.54 Aligned_cols=137 Identities=18% Similarity=0.139 Sum_probs=94.8
Q ss_pred eEEEEEEECCCCCeEEEEEEeecccc----C----hhcHHHHHHHHHHHHhccCCCCe--eEEEEEEEe-----CCeEEE
Q 009091 108 GITYLCTENSTGNSYACKSILKRKLV----N----KQDREDIKREIQIMQHLSGQQNI--VEFRGAYED-----RQSVHL 172 (544)
Q Consensus 108 g~Vy~~~~~~~~~~~avK~~~~~~~~----~----~~~~~~~~~E~~~l~~l~~h~~i--v~~~~~~~~-----~~~~~l 172 (544)
..|+++.. .|+.|.||........ . ......+.+|...+.+|. .-+| +..+++.+. ...-+|
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEE
Confidence 34555543 4667888866322100 0 011124778999988885 2232 334444432 235789
Q ss_pred EEeccCCC-ChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC----CCCccEEEeecCCc
Q 009091 173 VMELCSGG-ELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK----DGGAMLKATDFGLS 245 (544)
Q Consensus 173 v~e~~~~~-~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~----~~~~~vkl~Dfg~a 245 (544)
|||++++. +|.+++.. ....+......++.+++..+..||..||+|+|+++.|||+..+ ++...+.|+||+.+
T Consensus 113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 99999885 78888764 3445667788999999999999999999999999999999642 33567999999987
Q ss_pred cc
Q 009091 246 VF 247 (544)
Q Consensus 246 ~~ 247 (544)
..
T Consensus 193 ~~ 194 (268)
T PRK15123 193 QI 194 (268)
T ss_pred cc
Confidence 53
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.8e-10 Score=88.50 Aligned_cols=64 Identities=17% Similarity=0.519 Sum_probs=55.5
Q ss_pred HHHHHHHhhhc-cCCCC-cccHHHHHHHHHH-c----CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFD-KDNSG-YITRDELETAMKD-Y----GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~-~----g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+..+|..|| +||+| +|+.+||+.+|.. + +.. ++.+++++++++|.|+||.|+|+||+.+|..
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 56788999999 78998 5999999999976 2 223 6789999999999999999999999998864
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-09 Score=97.21 Aligned_cols=100 Identities=26% Similarity=0.332 Sum_probs=84.4
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CCC-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GIG-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~~-~~~~~~~~~ 513 (544)
.++..+|..+|.+++|.|++.||...+...........+..+|+.+|.+++|.|+.+||..++... ... ..+.++.+|
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 457788999999999999999998777543333455678999999999999999999999987664 222 667899999
Q ss_pred HHhCCCCCcceeHHHHHHHHhc
Q 009091 514 SEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+|.+++|.|+++||..++..
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999998874
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.1e-09 Score=93.92 Aligned_cols=114 Identities=25% Similarity=0.333 Sum_probs=52.2
Q ss_pred cCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCc
Q 009091 409 MDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488 (544)
Q Consensus 409 ~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~ 488 (544)
||.+++|+|..+||+.+-+.+ ..++.+|+.+|.|++|.|+..|+..++...--....+.+..+++.||..++|.
T Consensus 103 fd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~ 176 (221)
T KOG0037|consen 103 FDRDNSGTIGFKEFKALWKYI------NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGR 176 (221)
T ss_pred hcCCCCCccCHHHHHHHHHHH------HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCc
Confidence 344455555555555444432 33444555555555555555554444433222223333444445555444445
Q ss_pred ccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcc--eeHHHHHHHH
Q 009091 489 ITRDELETAMKDYGIGDEASIKEIISEVDTDNDGR--INYEEFCTMM 533 (544)
Q Consensus 489 Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~--i~~~eF~~~~ 533 (544)
|..++|.+++..+ ..+.+.|++.|++.+|. |+|++|+.+.
T Consensus 177 i~FD~FI~ccv~L-----~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 177 IDFDDFIQCCVVL-----QRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred eeHHHHHHHHHHH-----HHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 5555554444332 23344455555444444 3555555443
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-09 Score=98.09 Aligned_cols=131 Identities=21% Similarity=0.214 Sum_probs=81.9
Q ss_pred EEEEEEECCCCCeEEEEEEeeccccC-----------------------hhcHHHHHHHHHHHHhccCC-CCeeEEEEEE
Q 009091 109 ITYLCTENSTGNSYACKSILKRKLVN-----------------------KQDREDIKREIQIMQHLSGQ-QNIVEFRGAY 164 (544)
Q Consensus 109 ~Vy~~~~~~~~~~~avK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~ 164 (544)
.||.|... +|..+|+|+.......- ........+|.+.|.++... -++++.+++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48888864 57799999885432110 01123467899999999733 2567776552
Q ss_pred EeCCeEEEEEeccC--CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 165 EDRQSVHLVMELCS--GGELFDKIIAQGHYTEKAAAALCRAIVNVVHH-CHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 165 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~-lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
. .+|||||++ |..+.. +... .++......++.+++..+.. +|..||+|+||.+.|||+..+ .+.|+|
T Consensus 80 --~--~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~----~~~iID 149 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG----KVYIID 149 (188)
T ss_dssp --T--TEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT----CEEE--
T ss_pred --C--CEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc----eEEEEe
Confidence 2 369999998 655544 3322 12244556777788885555 579999999999999999653 599999
Q ss_pred cCCcccccC
Q 009091 242 FGLSVFIDE 250 (544)
Q Consensus 242 fg~a~~~~~ 250 (544)
||.+.....
T Consensus 150 f~qav~~~~ 158 (188)
T PF01163_consen 150 FGQAVDSSH 158 (188)
T ss_dssp GTTEEETTS
T ss_pred cCcceecCC
Confidence 999876653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.2e-10 Score=87.72 Aligned_cols=68 Identities=19% Similarity=0.292 Sum_probs=61.5
Q ss_pred HHHhhHHHHhcccCC-CCCCccCHHHHHHHHHH-hCCCCCH-HHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 397 EEIKGLKTMFANMDT-DKSGTITYEELKTGLAR-LGSKLSE-TEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~-~~~G~I~~~e~~~~l~~-~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
..+..+..+|..||. +++|+|+.+||+.++.. ++..++. .+++.+++.+|.|+||.|+|+||+..+..
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 345678899999999 99999999999999999 8887888 89999999999999999999999876643
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=115.06 Aligned_cols=126 Identities=13% Similarity=0.173 Sum_probs=93.5
Q ss_pred HhcccCCCCCCccCHHHHHHHHHH-hCC--CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchH---HHHHHH
Q 009091 405 MFANMDTDKSGTITYEELKTGLAR-LGS--KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE---HLYKAF 478 (544)
Q Consensus 405 ~F~~~D~~~~G~I~~~e~~~~l~~-~~~--~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~---~~~~~F 478 (544)
-|..+|.+ .++.+++...... +.. .-..+++...|..+|.|+||.+ +...+..+.. ...++. .++.+|
T Consensus 112 ~~~~~~~~---~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrslG~--~~pte~e~~fi~~mf 185 (644)
T PLN02964 112 RISVFETN---RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV-VGSIFVSCSI--EDPVETERSFARRIL 185 (644)
T ss_pred EEEEEecC---CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHhCC--CCCCHHHHHHHHHHH
Confidence 56777765 5666665543322 010 1123567888999999999997 3433333221 122333 389999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.|++|.|+.+||..+|..++.. +++++.++|+.+|.|+||.|+++||..+|...
T Consensus 186 ~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 186 AIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 99999999999999999999998866 88899999999999999999999999998873
|
|
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=85.13 Aligned_cols=64 Identities=19% Similarity=0.500 Sum_probs=57.4
Q ss_pred HHHHHHHhhhcc-CC-CCcccHHHHHHHHHH---cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDK-DN-SGYITRDELETAMKD---YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~-d~-dG~Is~~el~~~l~~---~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+-.+|..||. || +|+|+.+||+.+|.. +|.. ++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 457789999998 77 899999999999963 6877 8999999999999999999999999988763
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.5e-09 Score=93.71 Aligned_cols=100 Identities=27% Similarity=0.280 Sum_probs=83.9
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-C-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-G-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-~-~~~~~~~~~ 513 (544)
.++...|..+|.+++|.|++.||..++.........+.+..+|+.+|.+++|.|+.+||..++..... . ..+.+..+|
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 34678899999999999999999887654333345678999999999999999999999998876432 2 556788999
Q ss_pred HHhCCCCCcceeHHHHHHHHhc
Q 009091 514 SEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+|.+++|.|+.+||..++..
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHH
Confidence 9999999999999999988865
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.8e-10 Score=82.43 Aligned_cols=61 Identities=38% Similarity=0.669 Sum_probs=48.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHH----HHHHHHhcCCCCCceeeehhhhhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE----VKQLMDAADVDGNGTIDYIEFISA 461 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~----~~~~~~~~D~d~dg~i~~~eF~~~ 461 (544)
+++++|+.+|.|++|+|+.+||..++..++......+ +..+|+.+|.|+||.|+|+||+.+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 4678999999999999999999999999887665444 444477778888888888777653
|
... |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-09 Score=86.37 Aligned_cols=65 Identities=26% Similarity=0.554 Sum_probs=57.6
Q ss_pred hHHHHHHHhhhcc-CC-CCcccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDK-DN-SGYITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~-d~-dG~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.||. |+ +|+|+.+||+.+|.. +|.. ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3568899999997 97 699999999999986 4555 7889999999999999999999999988864
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-09 Score=85.10 Aligned_cols=65 Identities=23% Similarity=0.556 Sum_probs=57.1
Q ss_pred hHHHHHHHhhhc-cCCCCc-ccHHHHHHHHHH-cCC----C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNSGY-ITRDELETAMKD-YGI----G-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~dG~-Is~~el~~~l~~-~g~----~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++++|+.|| +|++|+ |+..||+.+|+. +|. . ++++++.+|..+|.|++|.|+|+||+.++..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467899999997 999995 999999999985 542 3 7789999999999999999999999988763
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.9e-09 Score=96.51 Aligned_cols=142 Identities=20% Similarity=0.259 Sum_probs=102.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc-----------------C--hhcHHHHHHHHHHHHhccCC-C
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV-----------------N--KQDREDIKREIQIMQHLSGQ-Q 155 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----------------~--~~~~~~~~~E~~~l~~l~~h-~ 155 (544)
+.++..||-|.-|.||.|.+. .|..+|||.-...... + .-.+....+|.++|.+|... -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567899999999999999976 6899999965322111 0 01223457899999999733 3
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 156 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
.|++.+++ +...+||||++|-.|... ++.......++..|+.-+..+-..||||+|+++-|||++. ++
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~---dg 239 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE---DG 239 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec---CC
Confidence 56666654 667899999998666542 1234455566666677666666899999999999999954 44
Q ss_pred cEEEeecCCcccccC
Q 009091 236 MLKATDFGLSVFIDE 250 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~ 250 (544)
.+.++||-.+.....
T Consensus 240 ~~~vIDwPQ~v~~~h 254 (304)
T COG0478 240 DIVVIDWPQAVPISH 254 (304)
T ss_pred CEEEEeCcccccCCC
Confidence 699999987765544
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.7e-09 Score=88.37 Aligned_cols=103 Identities=24% Similarity=0.286 Sum_probs=90.3
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHH-cCCC-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKD-YGIG-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~g~~-~~~~~~~~~ 513 (544)
++++..|..||.+++|.|+++|+...+.........+++.++...+|+++.|+|+.++|+.++.. +|.. +.+++..+|
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~af 112 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAF 112 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHH
Confidence 56899999999999999999999666655556677889999999999999999999999998754 5666 899999999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
+.+|.|++|+|++.+|+.++..-.+
T Consensus 113 rl~D~D~~Gkis~~~lkrvakeLge 137 (172)
T KOG0028|consen 113 RLFDDDKTGKISQRNLKRVAKELGE 137 (172)
T ss_pred HcccccCCCCcCHHHHHHHHHHhCc
Confidence 9999999999999999998875433
|
|
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-09 Score=79.21 Aligned_cols=60 Identities=30% Similarity=0.512 Sum_probs=55.3
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 475 YKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 475 ~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+|+.+|.|++|.|+.+||+.++..+|. ++++++.++..+|.+++|.|+|+||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 56899999999999999999999999886 7788999999999999999999999988753
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=5e-09 Score=84.05 Aligned_cols=63 Identities=24% Similarity=0.451 Sum_probs=57.5
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
...++.+|+.+|.|++|.|+.+||+.+|+..|. ++++++.++..+|.+++|.|+|+||+.+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~-~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGL-PQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 456889999999999999999999999999775 678899999999999999999999998665
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.1e-09 Score=84.02 Aligned_cols=67 Identities=22% Similarity=0.392 Sum_probs=60.8
Q ss_pred HHHhhHHHHhcccC-CCCCC-ccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 397 EEIKGLKTMFANMD-TDKSG-TITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 397 ~~~~~l~~~F~~~D-~~~~G-~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..+..+.++|..|| .+++| +|+.+||+.+|+. ++...+.+++..+++.+|.|++|.|+|+||+..+.
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~ 78 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 34567899999998 79999 5999999999999 89889999999999999999999999999987654
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.7e-08 Score=92.21 Aligned_cols=111 Identities=26% Similarity=0.312 Sum_probs=87.5
Q ss_pred cHHHHHHHHHHHHhccCCCC--eeEEEEEEEeC----CeEEEEEeccCCC-ChHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 009091 137 DREDIKREIQIMQHLSGQQN--IVEFRGAYEDR----QSVHLVMELCSGG-ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209 (544)
Q Consensus 137 ~~~~~~~E~~~l~~l~~h~~--iv~~~~~~~~~----~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~ql~~~l~ 209 (544)
......+|...+.+|. .-+ ++..+++.+.. ...+||+|++++. +|.+++......+......++.+++..+.
T Consensus 54 ~~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIA 132 (206)
T ss_pred cchHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHH
Confidence 3456778888888876 222 44555555542 2458999999884 79998887555777888999999999999
Q ss_pred HHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 210 ~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
-||..||+|+|+++.|||+...++...+.|+||+.+...
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999999999999999987766668999999987643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.9e-09 Score=81.21 Aligned_cols=64 Identities=22% Similarity=0.453 Sum_probs=55.3
Q ss_pred HHHHHHHhh-hccCCCC-cccHHHHHHHHHHc-----CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQY-FDKDNSG-YITRDELETAMKDY-----GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~-~D~d~dG-~Is~~el~~~l~~~-----g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+..+|+. +|+||+| +|+.+||+.++... +.. ++.+++++++.+|.|+||.|+|+||+.+|..
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 567889999 7788986 99999999999875 223 6789999999999999999999999988763
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.9e-08 Score=95.82 Aligned_cols=151 Identities=25% Similarity=0.374 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCCCCceeeehhhh
Q 009091 381 KLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGTIDYIEFI 459 (544)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~ 459 (544)
.+++.+++.+...+.. ...++.+-|++.|.++.|+|+...+..++..+ +.++.=-.+.- +....+.||.+.|.+.+
T Consensus 446 ~vEeSAlk~Lrerl~s-~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s~d~~v~Y~~~~ 522 (631)
T KOG0377|consen 446 IVEESALKELRERLRS-HRSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGSDDGKVEYKSTL 522 (631)
T ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCCcCcceehHhHH
Confidence 3444555554444432 23468889999999999999999999988884 55554322211 12334568899998876
Q ss_pred hhhhcccc------------ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC----CC-CHHHHHHHHHHhCCCCCc
Q 009091 460 SATMHRYR------------LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG----IG-DEASIKEIISEVDTDNDG 522 (544)
Q Consensus 460 ~~~~~~~~------------~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g----~~-~~~~~~~~~~~~d~~~dg 522 (544)
..+..... ......+..+|+.+|.|++|.||.+||+.+...++ .. +++++-++-..+|.|+||
T Consensus 523 ~~l~~e~~~~ea~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG 602 (631)
T KOG0377|consen 523 DNLDTEVILEEAGSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDG 602 (631)
T ss_pred HHhhhhhHHHHHHhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCC
Confidence 65532111 11234577899999999999999999999876653 34 788999999999999999
Q ss_pred ceeHHHHHHHHh
Q 009091 523 RINYEEFCTMMR 534 (544)
Q Consensus 523 ~i~~~eF~~~~~ 534 (544)
.|++.||+.+++
T Consensus 603 ~IDlNEfLeAFr 614 (631)
T KOG0377|consen 603 KIDLNEFLEAFR 614 (631)
T ss_pred cccHHHHHHHHh
Confidence 999999998876
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=6e-09 Score=83.56 Aligned_cols=68 Identities=29% Similarity=0.468 Sum_probs=62.4
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++++++.++.++|..+|.+++|.|+.+||..+++.++ ++..++..++..+|.+++|.|+|+||+.++.
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 5778899999999999999999999999999999975 5788999999999999999999999987664
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-09 Score=111.81 Aligned_cols=149 Identities=19% Similarity=0.256 Sum_probs=106.8
Q ss_pred HHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCcee----------cccCCccccCcccccc-c
Q 009091 205 VNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR----------DIVGSAYYVAPEVLRR-S 272 (544)
Q Consensus 205 ~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~----------~~~gt~~y~aPE~~~~-~ 272 (544)
+.|+.|+|.. ++||+.|.|++|.+ +..+..||+.|+.+.....+.... -..-...|.|||.+.. .
T Consensus 109 ~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 109 ADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 3899999964 99999999999999 555679999999887655421110 1124567999998764 4
Q ss_pred CCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCC-cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 273 YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESE-PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 273 ~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.++|+||+||++|-+.. |+.-+...... +.............. ....++.++++-+.+++..++..||++..++.
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGL-LSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCc-chhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 7889999999999999994 54444333221 111111111111111 11367899999999999999999999999999
Q ss_pred CCccccC
Q 009091 351 HPWMREG 357 (544)
Q Consensus 351 hp~f~~~ 357 (544)
.|||...
T Consensus 265 ~~ff~D~ 271 (700)
T KOG2137|consen 265 IPFFSDP 271 (700)
T ss_pred ccccCCc
Confidence 9999864
|
|
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-08 Score=83.59 Aligned_cols=65 Identities=23% Similarity=0.386 Sum_probs=55.5
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
....+..+|..+|.|+||+|+.+||..++ ++. .+..++.+|..+|.|+||.||++||..++.+..
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~~-~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~~~ 110 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LDP-NEHCIKPFFESCDLDKDGSISLDEWCYCFIKED 110 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--ccc-hHHHHHHHHHHHCCCCCCCCCHHHHHHHHhChh
Confidence 34678899999999999999999999876 222 567788999999999999999999999994433
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=80.49 Aligned_cols=65 Identities=17% Similarity=0.469 Sum_probs=57.4
Q ss_pred hHHHHHHHhhhcc--CCCCcccHHHHHHHHHH-cCCC-----CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDK--DNSGYITRDELETAMKD-YGIG-----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~--d~dG~Is~~el~~~l~~-~g~~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.||+ |++|.|+.+||+.+++. +|.. ++++++.++..+|.+++|.|+|+||+.+|..
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4568889999999 89999999999999976 4532 4889999999999999999999999998864
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.6e-08 Score=78.97 Aligned_cols=67 Identities=24% Similarity=0.452 Sum_probs=59.0
Q ss_pred HHHhhHHHHhcccCC-CC-CCccCHHHHHHHHHH---hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 397 EEIKGLKTMFANMDT-DK-SGTITYEELKTGLAR---LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~-~~-~G~I~~~e~~~~l~~---~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
+.+..+..+|..+|. |+ +|+|+.+||+.++.. +|...+.+++..+++.+|.|++|.|+|+||+..+.
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 345567889999998 67 899999999999974 68889999999999999999999999999987654
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.9e-08 Score=70.25 Aligned_cols=51 Identities=39% Similarity=0.731 Sum_probs=46.4
Q ss_pred CCCcccHHHHHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 485 NSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 485 ~dG~Is~~el~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+|.|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999888865 7889999999999999999999999999863
|
... |
| >KOG4251 consensus Calcium binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-08 Score=89.81 Aligned_cols=139 Identities=18% Similarity=0.230 Sum_probs=96.6
Q ss_pred HHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC---CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch--
Q 009091 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLG---SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD-- 471 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~---~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~-- 471 (544)
+-.+.++.+|.+.|.|.||+|+..|+++++..-. ......+-+..|+.+|.|+||.|+|+||...+.........
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 3446788999999999999999999999987632 11123445668899999999999999997655432211111
Q ss_pred ------------HHHHHHHhhhccCCCCcccH---------HHHHHHHHHcCC-C-CHHHHHHHHHHhCCCCCcceeHHH
Q 009091 472 ------------EHLYKAFQYFDKDNSGYITR---------DELETAMKDYGI-G-DEASIKEIISEVDTDNDGRINYEE 528 (544)
Q Consensus 472 ------------~~~~~~F~~~D~d~dG~Is~---------~el~~~l~~~g~-~-~~~~~~~~~~~~d~~~dg~i~~~e 528 (544)
++-.+.|..-+++.+|..+. .||..+|..-.. . ....++++...+|+|+|..++..|
T Consensus 178 adairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpe 257 (362)
T KOG4251|consen 178 ADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPE 257 (362)
T ss_pred HHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchh
Confidence 11223455555566555544 888777743211 1 346778889999999999999999
Q ss_pred HHHHHhc
Q 009091 529 FCTMMRS 535 (544)
Q Consensus 529 F~~~~~~ 535 (544)
|++....
T Consensus 258 FislpvG 264 (362)
T KOG4251|consen 258 FISLPVG 264 (362)
T ss_pred hhcCCCc
Confidence 9876543
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.7e-08 Score=87.82 Aligned_cols=98 Identities=22% Similarity=0.340 Sum_probs=79.9
Q ss_pred HHHhcccCCCCCCc-cCHHHHHHHHHHhCCCCCHH-HHHHHHHhcCCCCCceeeehhhhhhhhccccc-c------chHH
Q 009091 403 KTMFANMDTDKSGT-ITYEELKTGLARLGSKLSET-EVKQLMDAADVDGNGTIDYIEFISATMHRYRL-E------RDEH 473 (544)
Q Consensus 403 ~~~F~~~D~~~~G~-I~~~e~~~~l~~~~~~~~~~-~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~-~------~~~~ 473 (544)
.+++..||.+++|. |+.++|...+.......... .++-.|+.||.+++|.|+.+|+...+...... . ..+-
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 36788889988888 99999999999976665555 79999999999999999999998876443221 1 1233
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
+...|..+|.|+||+|+.+|+++++..
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 567899999999999999999998865
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.71 E-value=3e-08 Score=78.80 Aligned_cols=67 Identities=22% Similarity=0.413 Sum_probs=57.4
Q ss_pred HHhhHHHHhcccC-CCCCCc-cCHHHHHHHHHH-hC----CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 398 EIKGLKTMFANMD-TDKSGT-ITYEELKTGLAR-LG----SKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 398 ~~~~l~~~F~~~D-~~~~G~-I~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
.++.+.++|..|| .+++|+ |+..||..+|+. ++ ..++..+++.+|+.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3467899999997 999995 999999999986 44 3468889999999999999999999999876643
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.5e-08 Score=70.41 Aligned_cols=60 Identities=52% Similarity=0.880 Sum_probs=56.0
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
+..+|+.+|.+++|.|+.+|+..++..++.. +.+.+..++..+|.+++|.|++++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999887 88899999999999999999999998765
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.9e-08 Score=78.77 Aligned_cols=67 Identities=24% Similarity=0.385 Sum_probs=56.2
Q ss_pred HHhhHHHHhcccC-CCCCC-ccCHHHHHHHHHH-h----CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 398 EIKGLKTMFANMD-TDKSG-TITYEELKTGLAR-L----GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 398 ~~~~l~~~F~~~D-~~~~G-~I~~~e~~~~l~~-~----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
.+..+.++|..|| .|++| +|+.+||+.++.. + ....+..++..+++.+|.|+||.|+|+||+..+..
T Consensus 8 a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 8 AMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 4567888999999 78998 5999999999977 3 33447789999999999999999999999876643
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 544 | ||||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 6e-85 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 8e-85 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 8e-85 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 1e-82 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-81 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 2e-80 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-79 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 9e-72 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-60 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-59 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 6e-59 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 9e-59 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 2e-58 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-57 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-57 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 6e-57 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-56 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-56 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 1e-56 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 2e-56 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 6e-56 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 6e-56 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-55 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 5e-55 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 1e-54 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 6e-54 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 7e-54 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 4e-53 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-52 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-52 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-52 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 2e-52 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 3e-52 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 3e-52 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 3e-52 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 3e-52 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 3e-52 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 3e-52 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 3e-52 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 4e-52 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 4e-52 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 4e-52 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 1e-51 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 1e-51 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-51 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 2e-51 | ||
| 2jam_B | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 4e-51 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 6e-51 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 2e-50 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-50 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 3e-50 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-50 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 3e-50 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 3e-50 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 4e-50 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 3e-48 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 8e-48 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 8e-48 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-46 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 2e-46 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 2e-46 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-46 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 3e-46 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 1e-45 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-45 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-45 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 1e-45 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 2e-45 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-45 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 8e-45 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 8e-44 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-43 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 2e-41 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 3e-41 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-40 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 1e-40 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-40 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 2e-39 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 2e-39 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 2e-39 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 4e-39 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-39 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 4e-39 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 5e-39 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 8e-39 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-38 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 1e-38 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 2e-38 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-38 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 6e-38 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-37 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-37 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-37 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 3e-37 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 4e-37 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 4e-37 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 5e-37 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 5e-37 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 5e-37 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 6e-37 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 6e-37 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 7e-37 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 7e-37 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 7e-37 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 7e-37 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 7e-37 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 7e-37 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 8e-37 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 9e-37 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 1e-36 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 1e-36 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 1e-36 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 1e-36 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 3e-36 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 3e-36 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 4e-36 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 5e-36 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 6e-36 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 7e-36 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 8e-36 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 8e-36 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 1e-35 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-35 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-35 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-35 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-35 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-35 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 3e-35 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-35 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 4e-35 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 4e-35 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 4e-35 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 4e-35 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-35 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 5e-35 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 5e-35 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 5e-35 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 5e-35 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 6e-35 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 6e-35 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 6e-35 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 7e-35 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 7e-35 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 1e-34 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-34 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-34 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-34 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-34 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 7e-34 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 8e-34 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 8e-34 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 8e-34 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-33 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 3e-33 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 5e-33 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 6e-33 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 8e-33 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-32 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 2e-32 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 2e-32 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 2e-32 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 3e-32 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-32 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-32 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 3e-32 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-32 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-32 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 3e-32 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 3e-32 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 4e-32 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-32 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 4e-32 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 4e-32 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 4e-32 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 5e-32 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 5e-32 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 5e-32 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 5e-32 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 5e-32 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 5e-32 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 5e-32 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 5e-32 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 5e-32 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 5e-32 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 5e-32 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 5e-32 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 6e-32 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 6e-32 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-32 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 7e-32 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 7e-32 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 7e-32 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 8e-32 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 8e-32 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 8e-32 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 8e-32 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 8e-32 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 8e-32 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 8e-32 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 8e-32 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 9e-32 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 9e-32 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 9e-32 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 9e-32 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 1e-31 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 1e-31 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 1e-31 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 1e-31 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 1e-31 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 2e-31 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 2e-31 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-31 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-31 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-31 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 3e-31 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-31 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 3e-31 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 4e-31 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 4e-31 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 5e-31 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 5e-31 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-31 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-31 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 6e-31 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 7e-31 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 9e-31 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 9e-31 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-30 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-30 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 1e-30 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 1e-30 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-30 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-30 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-30 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-30 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 1e-30 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-30 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 1e-30 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-30 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-30 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 1e-30 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 1e-30 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-30 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-30 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-30 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-30 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-30 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-30 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 5e-30 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 8e-30 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-29 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 2e-29 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 3e-29 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 3e-29 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 3e-29 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 3e-29 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 4e-29 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 4e-29 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 4e-29 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-29 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 6e-29 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 7e-29 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-29 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 7e-29 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 8e-29 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 8e-29 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 8e-29 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 9e-29 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-28 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-28 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-28 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-28 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 1e-28 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-28 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-28 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-28 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 2e-28 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 2e-28 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 2e-28 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-28 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-28 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-28 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-28 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 6e-28 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 6e-28 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 9e-28 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 8e-27 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 8e-27 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 8e-27 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 1e-26 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 1e-26 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-26 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-26 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 1e-26 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 1e-26 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-26 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-26 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 3e-26 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-26 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 4e-26 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 4e-26 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 4e-26 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 7e-26 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 9e-26 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 2e-25 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-25 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-25 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 3e-25 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 3e-25 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 4e-25 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 4e-25 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 4e-25 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 4e-25 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 4e-25 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 4e-25 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 5e-25 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 5e-25 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 5e-25 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 5e-25 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 6e-25 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 9e-25 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 1e-24 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-24 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-24 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 1e-24 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 1e-24 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 1e-24 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-24 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-24 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-24 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 2e-24 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 2e-24 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 2e-24 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 2e-24 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 2e-24 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 3e-24 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 4e-24 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 4e-24 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 4e-24 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 4e-24 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 5e-24 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 5e-24 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 6e-24 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 7e-24 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 8e-24 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 8e-24 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 8e-24 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 8e-24 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 8e-24 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 8e-24 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 9e-24 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 9e-24 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 9e-24 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 9e-24 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 9e-24 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 9e-24 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 1e-23 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 1e-23 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-23 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 1e-23 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 1e-23 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 1e-23 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 1e-23 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 2e-23 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 2e-23 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 2e-23 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-23 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 2e-23 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 2e-23 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 2e-23 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 3e-23 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 3e-23 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 4e-23 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 4e-23 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 4e-23 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 5e-23 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 5e-23 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 5e-23 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 6e-23 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 6e-23 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 6e-23 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 6e-23 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 1e-22 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-22 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 1e-22 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 2e-22 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 2e-22 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 2e-22 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 3e-22 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 3e-22 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 4e-22 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 4e-22 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 5e-22 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 7e-22 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 7e-22 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 8e-22 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 9e-22 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-21 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 1e-21 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-21 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-21 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-21 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 3e-21 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-21 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 3e-21 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 3e-21 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 4e-21 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 5e-21 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 5e-21 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 5e-21 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-21 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 5e-21 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 6e-21 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 6e-21 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 7e-21 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 1e-20 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 1e-20 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 1e-20 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 1e-20 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-20 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 2e-20 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 2e-20 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 2e-20 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 4e-20 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 8e-06 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 6e-20 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 7e-20 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 8e-20 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 1e-19 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-19 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-19 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-19 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 3e-19 | ||
| 3ekj_A | 449 | Calcium-Free Gcamp2 (Calcium Binding Deficient Muta | 3e-19 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 4e-19 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-18 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-18 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-18 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-18 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-18 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-18 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-18 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 2e-18 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-18 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 2e-18 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 2e-18 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-18 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-18 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 2e-18 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 2e-18 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-18 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-18 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 3e-18 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 3e-18 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 3e-18 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 3e-18 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 3e-18 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 3e-18 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 3e-18 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 3e-18 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 4e-18 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 4e-18 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 4e-18 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 4e-18 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-18 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 4e-18 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-18 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 4e-18 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 4e-18 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 4e-18 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-18 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 5e-18 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 5e-18 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 5e-18 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 5e-18 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 5e-18 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 5e-18 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 5e-18 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 5e-18 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 5e-18 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 5e-18 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 5e-18 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 5e-18 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 5e-18 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 6e-18 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 6e-18 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 6e-18 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-18 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 7e-18 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 7e-18 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 7e-18 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 8e-18 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 9e-18 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 9e-18 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-17 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 2e-17 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-17 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 3e-17 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 3e-17 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 3e-17 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 3e-17 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 3e-17 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 3e-17 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 4e-17 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-17 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-17 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 6e-17 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 6e-17 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 7e-17 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 8e-17 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 9e-17 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 9e-17 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 1e-16 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-16 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-16 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 1e-16 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 1e-16 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-16 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 1e-16 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 1e-16 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 1e-16 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-16 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 2e-16 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-16 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-16 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 2e-16 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 2e-16 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-16 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 2e-16 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 2e-16 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 2e-16 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 2e-16 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 3e-16 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-16 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 3e-16 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 3e-16 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 3e-16 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 4e-16 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 4e-16 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 4e-16 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 4e-16 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 5e-16 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 5e-16 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 6e-16 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 6e-16 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 7e-16 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 7e-16 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 7e-16 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 7e-16 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 8e-16 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 8e-16 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 8e-16 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 9e-16 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 9e-16 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 9e-16 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-15 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 1e-15 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-15 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-15 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-15 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-15 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-15 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-15 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 1e-15 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 2e-15 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-15 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 2e-15 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 2e-15 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-15 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 2e-15 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 2e-15 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-15 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 2e-15 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 2e-15 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 2e-15 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 2e-15 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-15 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-15 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 2e-15 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-15 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 2e-15 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-15 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-15 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 2e-15 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-15 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-15 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 2e-15 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 2e-15 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 2e-15 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 2e-15 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 2e-15 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-15 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 2e-15 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-15 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-15 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 2e-15 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-15 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 2e-15 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-15 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 2e-15 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 2e-15 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-15 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 3e-15 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 3e-15 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 3e-15 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-15 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 3e-15 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-15 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 3e-15 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-15 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 4e-15 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 4e-15 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 4e-15 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 4e-15 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-15 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 6e-15 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 6e-15 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 6e-15 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 6e-15 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 7e-15 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 7e-15 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 8e-15 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 7e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 9e-15 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 9e-15 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 9e-15 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 1e-14 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 1e-14 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 3e-04 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 1e-14 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 6e-04 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-14 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 1e-14 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 4e-04 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-14 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 1e-14 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 1e-14 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 3e-04 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 1e-14 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 4e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-14 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-14 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-14 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 2e-14 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 2e-14 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 4e-04 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 2e-14 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 2e-14 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 2e-14 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-14 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 2e-14 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-14 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-14 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 3e-14 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 3e-14 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 3e-14 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 3e-14 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-14 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 3e-14 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 4e-14 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 4e-14 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-14 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 5e-14 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 5e-14 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 5e-14 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 5e-14 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 5e-14 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 5e-14 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 5e-14 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 5e-14 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 5e-14 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 5e-14 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 5e-14 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 5e-14 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 6e-14 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 6e-14 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 6e-14 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 6e-14 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 6e-14 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 6e-14 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 6e-14 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 6e-14 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 7e-14 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 7e-14 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 8e-14 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-13 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 1e-13 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 1e-13 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-13 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-13 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 1e-13 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 1e-13 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 1e-13 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 1e-13 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-13 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 2e-13 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 2e-13 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 2e-13 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-13 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-13 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-13 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 2e-13 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 2e-13 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-13 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-13 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-13 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 2e-13 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 2e-13 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 2e-13 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 2e-13 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 2e-13 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 2e-13 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 2e-13 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 2e-13 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 3e-13 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 3e-13 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 3e-13 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 3e-13 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 3e-13 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 3e-13 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 3e-13 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 3e-13 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 3e-13 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 4e-13 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 4e-13 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 4e-13 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 5e-13 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 5e-13 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 5e-13 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 5e-13 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 5e-13 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 5e-13 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 5e-13 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 6e-13 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 6e-13 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 6e-13 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 6e-13 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 6e-13 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 7e-13 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 7e-13 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 7e-13 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 1e-06 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 8e-13 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 8e-13 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 8e-13 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 8e-13 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 9e-13 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 9e-13 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-12 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-12 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-12 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 1e-12 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-12 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-12 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 2e-12 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-12 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-12 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-12 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-12 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-12 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-12 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-12 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-12 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-12 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-12 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-12 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-12 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-12 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 3e-12 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-12 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 3e-12 | ||
| 1aj4_A | 161 | Structure Of Calcium-Saturated Cardiac Troponin C, | 3e-12 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 3e-12 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 3e-12 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 3e-12 | ||
| 1dtl_A | 161 | Crystal Structure Of Calcium-Saturated (3ca2+) Card | 3e-12 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-12 | ||
| 2jt0_A | 161 | Solution Structure Of F104w Cardiac Troponin C Leng | 4e-12 | ||
| 2jt3_A | 161 | Solution Structure Of F153w Cardiac Troponin C Leng | 4e-12 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 4e-12 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-12 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-12 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-12 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-12 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 4e-12 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-12 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 5e-12 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 5e-12 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 5e-12 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-12 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 5e-12 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 5e-12 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-12 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 6e-12 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-12 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 8e-12 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-12 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 8e-12 | ||
| 2jtz_A | 161 | Solution Structure And Chemical Shift Assignments O | 9e-12 | ||
| 2jt8_A | 161 | Solution Structure Of The F153-To-5-Flurotryptophan | 9e-12 | ||
| 1la0_A | 161 | Solution Structure Of Calcium Saturated Cardiac Tro | 1e-11 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 1e-11 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-11 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-11 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 2e-11 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 2e-11 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-11 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 2e-11 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 2e-11 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 3e-11 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-11 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-11 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 3e-11 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 3e-11 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 4e-11 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-11 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 4e-11 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 4e-11 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 4e-11 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 4e-11 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 4e-11 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 5e-11 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 5e-11 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 5e-11 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 5e-11 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 5e-11 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 6e-11 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 6e-11 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 6e-11 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 6e-11 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 6e-11 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 6e-11 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 6e-11 | ||
| 3mse_B | 180 | Crystal Structure Of C-Terminal Domain Of Pf110239 | 6e-11 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 7e-11 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-11 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 7e-11 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 7e-11 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-11 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 8e-11 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 8e-11 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 8e-11 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 8e-11 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 8e-11 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 8e-11 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 9e-11 | ||
| 2bl0_C | 142 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 9e-11 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 9e-11 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 1e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-10 | ||
| 3fwb_A | 161 | Sac3:sus1:cdc31 Complex Length = 161 | 1e-10 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 1e-10 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-10 | ||
| 2gv5_A | 161 | Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 1 | 1e-10 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-10 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-10 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-10 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-10 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-10 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-10 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-10 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-10 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-10 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 3e-10 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-10 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 3e-10 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 3e-10 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 3e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-10 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-10 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 3e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-10 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 3e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 4e-10 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 4e-10 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 4e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-10 | ||
| 2jnf_A | 158 | Solution Structure Of Fly Troponin C, Isoform F1 Le | 5e-10 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 5e-10 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 2e-07 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 6e-10 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 6e-10 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 6e-10 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 7e-10 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 7e-10 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 7e-10 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 7e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 8e-10 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-10 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-10 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 9e-10 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-09 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-09 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-09 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-09 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-09 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-09 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-09 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-09 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-09 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 2e-09 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 1e-07 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-09 | ||
| 2ggm_A | 172 | Human Centrin 2 Xeroderma Pigmentosum Group C Prote | 2e-09 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-09 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 2e-09 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 2e-07 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 2e-09 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 2e-07 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-09 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 2e-09 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 2e-09 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 2e-07 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 2e-09 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 2e-07 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 2e-09 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 2e-07 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 2e-09 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 2e-09 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 2e-09 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-09 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 3e-09 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 3e-09 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 3e-09 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 3e-09 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-09 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 3e-09 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-09 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-09 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-09 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-09 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-09 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 4e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-09 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 4e-09 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 4e-09 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-09 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 4e-09 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 5e-09 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 5e-09 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 5e-09 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 5e-09 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 5e-09 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-09 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 5e-09 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 5e-09 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 5e-09 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 5e-09 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 5e-09 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 5e-09 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 5e-09 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 5e-09 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 6e-09 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 6e-09 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 6e-09 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 7e-09 | ||
| 1j7o_A | 76 | Solution Structure Of Calcium-calmodulin N-terminal | 7e-09 | ||
| 1j7o_A | 76 | Solution Structure Of Calcium-calmodulin N-terminal | 2e-07 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 7e-09 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 8e-09 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 8e-09 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 8e-09 | ||
| 2lv7_A | 100 | Solution Structure Of Ca2+-Bound Cabp7 N-Terminal D | 8e-09 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-09 | ||
| 1sw8_A | 79 | Solution Structure Of The N-Terminal Domain Of Huma | 8e-09 | ||
| 1sw8_A | 79 | Solution Structure Of The N-Terminal Domain Of Huma | 5e-08 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 8e-09 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 8e-09 | ||
| 2jnx_A | 134 | Nmr Derived Solution Structure Of An Ef-Hand Calciu | 8e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 9e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 9e-09 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-08 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-08 | ||
| 2ro8_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-08 | ||
| 2ro8_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-06 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-08 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-08 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-08 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 1e-08 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 2kn2_A | 92 | Solution Structure Of The C-Terminal Domain Of Soyb | 1e-08 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 1e-08 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-08 | ||
| 2rob_A | 70 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-08 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 1e-08 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-08 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-08 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-08 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 2e-08 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 2e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-08 | ||
| 3e3r_A | 204 | Crystal Structure And Biochemical Characterization | 2e-08 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-08 | ||
| 1f54_A | 77 | Solution Structure Of The Apo N-Terminal Domain Of | 2e-08 | ||
| 1f54_A | 77 | Solution Structure Of The Apo N-Terminal Domain Of | 1e-06 | ||
| 2ksz_A | 76 | The Solution Structure Of The Magnesium Bound Soybe | 2e-08 | ||
| 2ksz_A | 76 | The Solution Structure Of The Magnesium Bound Soybe | 3e-05 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 2e-08 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-08 | ||
| 2roa_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 2e-08 | ||
| 2roa_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 3e-05 | ||
| 2i08_A | 78 | Solvation Effect In Conformational Changes Of Ef-Ha | 2e-08 | ||
| 2i08_A | 78 | Solvation Effect In Conformational Changes Of Ef-Ha | 1e-07 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 3e-08 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 3e-08 | ||
| 1f71_A | 67 | Refined Solution Structure Of Calmodulin C-Terminal | 3e-08 | ||
| 2bl0_B | 145 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 3e-08 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-08 |
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant Of Human Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C In The Troponin C-Troponin I Complex Length = 161 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 142 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex Length = 161 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 161 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1 Length = 158 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein Complex Length = 172 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman Length = 100 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79 | Back alignment and structure |
|
| >pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain Length = 70 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of Recombinant Human Calcyphosine Delineates A Novel Ef-hand-containing Protein Family Length = 204 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77 | Back alignment and structure |
|
| >pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77 | Back alignment and structure |
|
| >pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean Calmod Isoform 4 N-Domain Length = 76 | Back alignment and structure |
|
| >pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean Calmod Isoform 4 N-Domain Length = 76 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand Proteins: X-Ray Structure Of Ca2+-Saturated Double Mutant Q41l-K75i Of N-Domain Of Calmodulin Length = 78 | Back alignment and structure |
|
| >pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand Proteins: X-Ray Structure Of Ca2+-Saturated Double Mutant Q41l-K75i Of N-Domain Of Calmodulin Length = 78 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67 | Back alignment and structure |
|
| >pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 145 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 736 bits (1903), Expect = 0.0
Identities = 167/510 (32%), Positives = 256/510 (50%), Gaps = 33/510 (6%)
Query: 52 QPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
S+ + Q + + P + K I + Y ++LG G +G
Sbjct: 3 HHHHHSSGRENLYFQGIAIN---------PGMYVRKKEGKIGESYFKVRKLGSGAYGEVL 53
Query: 112 LCTENSTGNSYACKSILKRKLVN----------KQDREDIKREIQIMQHLSGQQNIVEFR 161
LC E + + A K I K + ++ E+I EI +++ L NI++
Sbjct: 54 LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLF 112
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ED++ +LV E GGELF++II + + E AA + + I++ + + H ++HRD+
Sbjct: 113 DVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDI 172
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPEN LL NK+ +K DFGLS F + RD +G+AYY+APEVL++ Y ++ DVWS
Sbjct: 173 KPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWS 232
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GVI+YILL G PPF + ++ I + KG F+ W ISD AK+L++ ML D K
Sbjct: 233 CGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292
Query: 342 RITSAEVLEHPWMREG---GEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSE-E 397
R T+ E L W+++ SD+ LS M++F KL + A+ I L+ E
Sbjct: 293 RCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLE 352
Query: 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLGS--------KLSETEVKQLMDAADVDG 449
E K L +F +D + G + +EL G L + K E EV ++ D D
Sbjct: 353 ERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDK 412
Query: 450 NGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASI 509
NG I+Y EFIS M + L +E L +AF FD D SG IT++EL I E +
Sbjct: 413 NGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSI-SEKTW 471
Query: 510 KEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539
+++ E D + D I+++EF +MM
Sbjct: 472 NDVLGEADQNKDNMIDFDEFVSMMHKICDH 501
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 734 bits (1896), Expect = 0.0
Identities = 176/473 (37%), Positives = 261/473 (55%), Gaps = 17/473 (3%)
Query: 80 KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE 139
P + Y + LG+G FG LC + TG A K I KR++ K D+E
Sbjct: 12 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 140 DIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA 199
+ RE+Q+++ L NI++ +ED+ +LV E+ +GGELFD+II++ ++E AA
Sbjct: 72 SLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259
+ R +++ + + H ++HRDLKPEN LL +K A ++ DFGLS + K +D +G
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 190
Query: 260 SAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319
+AYY+APEVL +Y ++ DVWS GVILYILLSG PPF E I + KG FE
Sbjct: 191 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR---EGGEASDKPIGSAVLSRMKQF 376
W +S+SAKDL+RKML P RI++ + L+H W++ + + D P + ++QF
Sbjct: 251 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQF 310
Query: 377 RAMNKLKKMALKVIAEAL-SEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR------- 428
+ KL + AL + L S++E K L +F MD + G + EL G
Sbjct: 311 QGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQ 370
Query: 429 ----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKD 484
L + E EV Q++DA D D NG I+Y EF++ M R L E L +AF+ FD D
Sbjct: 371 DASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSD 430
Query: 485 NSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
NSG I+ EL T + D + K ++SEVD +NDG ++++EF M+
Sbjct: 431 NSGKISSTELATIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 482
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 725 bits (1873), Expect = 0.0
Identities = 170/470 (36%), Positives = 254/470 (54%), Gaps = 22/470 (4%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ Y + LG+G FG C + T YA K I K NK D I RE+++++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLK 76
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L NI++ ED S ++V EL +GGELFD+II + ++E AA + + + + +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRDLKPEN LL +K+ +K DFGLS + +D +G+AYY+APEVL
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 270 RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
R +Y ++ DVWSAGVILYILLSG PPF+ + E I + G F+ W ISD AKD
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMR----EGGEASDKPIGSAVLSRMKQFRAMNKLKKM 385
L+RKML P RIT+ + LEHPW++ E SD P + ++ ++QF+A KL +
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQA 315
Query: 386 ALKVIAEALSE-EEIKGLKTMFANMDTDKSGTITYEELKTGLARL--------------G 430
AL +A L+ +E K L +F +DT+ G + +EL G
Sbjct: 316 ALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNE 375
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
E ++ LM D+DG+G+I+Y EFI++ + R L E + +AF+ FDKD SG I+
Sbjct: 376 GSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKIS 435
Query: 491 RDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539
EL ++ II +VD + DG +++ EF M+++
Sbjct: 436 TKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVRN 485
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 724 bits (1870), Expect = 0.0
Identities = 171/502 (34%), Positives = 280/502 (55%), Gaps = 25/502 (4%)
Query: 49 LHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFG 108
+H S + Q ++++ P + + + Y K+LG G +G
Sbjct: 1 MHHHHHHSSGRENLYFQGDLQAT---------PGMFITSKKGHLSEMYQRVKKLGSGAYG 51
Query: 109 ITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168
LC + T A K I K + + + E+ +++ L NI++ +ED++
Sbjct: 52 EVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLD-HPNIMKLYDFFEDKR 109
Query: 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLL 228
+ +LVME GGELFD+II + + E AA + + +++ V + H ++HRDLKPEN LL
Sbjct: 110 NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLL 169
Query: 229 SNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYI 288
+K+ A++K DFGLS + K ++ +G+AYY+APEVLR+ Y ++ DVWS GVIL+I
Sbjct: 170 ESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFI 229
Query: 289 LLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEV 348
LL+G PPF +T++ I + KG F+S W +S+ AKDL+++ML D ++RI++ +
Sbjct: 230 LLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQA 289
Query: 349 LEHPWMREGGEAS----DKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEEEIKGLK 403
LEHPW++E + P + + M++F+ KL + AL +A L S+EE K L
Sbjct: 290 LEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELT 349
Query: 404 TMFANMDTDKSGTITYEELKTGLARLGSK--------LSETEVKQLMDAADVDGNGTIDY 455
+F ++D + G + +EL G ++L + E+EV ++ AAD D NG IDY
Sbjct: 350 DIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDY 409
Query: 456 IEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISE 515
EF++ M R L + L AFQ FD+D +G I+ DEL + + + + KE+IS
Sbjct: 410 SEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL-ESKTWKEMISG 468
Query: 516 VDTDNDGRINYEEFCTMMRSGT 537
+D++NDG +++EEFC M++
Sbjct: 469 IDSNNDGDVDFEEFCKMIQKLC 490
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 677 bits (1749), Expect = 0.0
Identities = 138/454 (30%), Positives = 221/454 (48%), Gaps = 22/454 (4%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ Y L +ELG+G F + C + G YA I +KL + +D + ++RE +I +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICR 65
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L NIV + + +L+ +L +GGELF+ I+A+ +Y+E A+ + I+ V
Sbjct: 66 LLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEV 268
HCH MGV+HR+LKPEN LL++K GA +K DFGL++ ++ E + + G+ Y++PEV
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
LR+ YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ A
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMAL 387
KDL+ KML +P KRIT+AE L+HPW+ + + +K+F A KLK L
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAIL 304
Query: 388 KVIA--EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
V+ S + + +K ++ +G +K+ + + A
Sbjct: 305 TVMLATRNFSVRKQEIIKVTEQLIEAISNGDFE----------SYTKMCDPGMTAFEPEA 354
Query: 446 DVDGNGTIDYIEFISATM-HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG 504
+ +D+ F + R + + D S I + + GI
Sbjct: 355 LGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIP 414
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538
+ + + V DG+ + RSG P
Sbjct: 415 R--TAQSEETRVWHRRDGKW---QIVHFHRSGAP 443
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 561 bits (1449), Expect = 0.0
Identities = 112/355 (31%), Positives = 187/355 (52%), Gaps = 6/355 (1%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P +S T + + + + Y + +ELG+G F + C +TG +A K
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
I +KL + +D + ++RE +I + L NIV + ++ +LV +L +GGELF+ I
Sbjct: 62 INTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
+A+ Y+E A+ + I+ + +CH G++HR+LKPEN LL++K GA +K DFGL++
Sbjct: 120 VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Query: 247 FIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305
+++ + + G+ Y++PEVL++ Y K +D+W+ GVILYILL G PPFW E + ++
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
I G D+ S W ++ AK L+ ML +PKKRIT+ + L+ PW+ +
Sbjct: 240 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 299
Query: 366 GSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYE 420
+ +K+F A KLK L + + + L N + E
Sbjct: 300 RQDTVDCLKKFNARRKLKGAILTTMI---ATRNLSNLGRNLLNKKEQGPPSTIKE 351
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 536 bits (1384), Expect = 0.0
Identities = 110/345 (31%), Positives = 173/345 (50%), Gaps = 12/345 (3%)
Query: 80 KPETVLGKPLED--IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ- 136
+L +D Y L + +G+G F + C TG +A K + K +
Sbjct: 8 GGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPG 67
Query: 137 -DREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH---- 191
ED+KRE I L +IVE Y +++V E G +L +I+ +
Sbjct: 68 LSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV 126
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDE 250
Y+E A+ R I+ + +CH ++HRD+KP LL++K+ A +K FG+++ +
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186
Query: 251 GKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL 309
G V VG+ +++APEV++R YGK +DVW GVIL+ILLSG PF+ E+ +F+ I+
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGII 245
Query: 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAV 369
KG W IS+SAKDLVR+ML+ DP +RIT E L HPW++E + K
Sbjct: 246 KGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPET 305
Query: 370 LSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKS 414
+ ++++F A KLK L ++ + D +
Sbjct: 306 VEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPT 350
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 529 bits (1365), Expect = 0.0
Identities = 117/329 (35%), Positives = 180/329 (54%), Gaps = 16/329 (4%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
AKD +R++L++DPKKR+T + L+HPW++ LSR M K KK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT-------QQALSRKASAVNMEKFKK 298
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDK 413
A + + S GL +F +
Sbjct: 299 FAARKKSNNGSGG---GLNDIFEAQKIEW 324
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 528 bits (1361), Expect = 0.0
Identities = 120/343 (34%), Positives = 187/343 (54%), Gaps = 10/343 (2%)
Query: 52 QPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
Q S+A T + + G + + F+ + ELGRG I Y
Sbjct: 11 VDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVY 70
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
C + T YA K + K D++ ++ EI ++ LS NI++ + +E +
Sbjct: 71 RCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEIS 124
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
LV+EL +GGELFD+I+ +G+Y+E+ AA + I+ V + H G++HRDLKPEN L +
Sbjct: 125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP 184
Query: 232 DGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILL 290
A LK DFGLS ++ + + + G+ Y APE+LR +YG E+D+WS G+I YILL
Sbjct: 185 APDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244
Query: 291 SGVPPFWAET-EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
G PF+ E ++ +F IL F S W +S +AKDLVRK+++ DPKKR+T+ + L
Sbjct: 245 CGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304
Query: 350 EHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAE 392
+HPW+ G+A++ ++++F A KLK V+A
Sbjct: 305 QHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVAS 345
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 511 bits (1317), Expect = 0.0
Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 6/312 (1%)
Query: 80 KPETVLGKPLEDIRQFYTL-GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
E + + +E+ FY L KELGRG+F + C STG YA K + KR+ + R
Sbjct: 14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCR 72
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKA 196
+I EI +++ ++ YE+ + L++E +GGE+F + + +E
Sbjct: 73 AEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND 132
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
L + I+ V++ H ++H DLKP+N LLS+ +K DFG+S I R+
Sbjct: 133 VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE 192
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
I+G+ Y+APE+L D+W+ G+I Y+LL+ PF E + + I + VD+
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG-EASDKPIGSAVLSRMK 374
E + +S A D ++ +L+++P+KR T+ L H W+++ E P ++ S+ +
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQ 312
Query: 375 QFRAMNKLKKMA 386
+ K +
Sbjct: 313 DHSVRSSEDKTS 324
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 507 bits (1309), Expect = e-180
Identities = 82/321 (25%), Positives = 162/321 (50%), Gaps = 12/321 (3%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+++ + Y + ++LGRG+FGI + C E S+ +Y K + + D+ +K+EI I+
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILN 56
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVV 208
+NI+ ++E + + ++ E SG ++F++I E+ + + +
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
H + H D++PEN + + + +K +FG + + G +R + + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRS-STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 269 LRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ D+WS G ++Y+LLSG+ PF AET + I + I+ F+ E + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMAL 387
D V ++L+++ K R+T++E L+HPW+++ + + + V+ +K R + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQ----KIERVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 388 KVIAEALSEEEIKGLKTMFAN 408
++ A +++
Sbjct: 291 NMVVSAARISCGGAIRSQKGV 311
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 505 bits (1302), Expect = e-177
Identities = 105/375 (28%), Positives = 169/375 (45%), Gaps = 24/375 (6%)
Query: 53 PPKMSAPQ-PQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
PP+ P P P QP + K I + + LG G G
Sbjct: 20 PPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVL 79
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----R 167
T +A K + QD +RE+++ S +IV YE+ R
Sbjct: 80 QIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 131
Query: 168 QSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225
+ + +VME GGELF +I +G +TE+ A+ + ++I + + H + + HRD+KPEN
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 191
Query: 226 FLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGV 284
L ++K A+LK TDFG + + YYVAPEVL Y K D+WS GV
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251
Query: 285 ILYILLSGVPPFWAE----TEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPK 340
I+YILL G PPF++ G+ I G +F + W +S+ K L+R +L +P
Sbjct: 252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT 311
Query: 341 KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIK 400
+R+T E + HPW+ + + P+ ++ + + + R + ++M + + E+IK
Sbjct: 312 QRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIK 371
Query: 401 GLKTMFANMDTDKSG 415
+ D
Sbjct: 372 ----IKKIEDASNPL 382
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 501 bits (1293), Expect = e-177
Identities = 115/348 (33%), Positives = 184/348 (52%), Gaps = 10/348 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + NI+ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG--EASDKPIGSAVLSRMKQFRAMNKL 382
+ AKD +RK+L+++ +KR+T E L HPW+ +A + L K+ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRW 306
Query: 383 KK-MALKVIAEALSEEEIKGLKT-MFANMDTDKSGTITYEELKTGLAR 428
K ++ + L+ +K + ++ +S T + L
Sbjct: 307 KLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHP 354
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 498 bits (1284), Expect = e-177
Identities = 111/280 (39%), Positives = 165/280 (58%), Gaps = 4/280 (1%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREI 145
G DI Q+YTL +GRG +G + + T A K I K + +D + K+EI
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 57
Query: 146 QIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+IM+ L NI+ +ED ++LVMELC+GGELF++++ + + E AA + + ++
Sbjct: 58 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ V +CH + V HRDLKPENFL + LK DFGL+ GK+ R VG+ YYV+
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 266 PEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
P+VL YG E D WSAGV++Y+LL G PPF A T+ + I +G F + WL +S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP 236
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
A+ L+R++L + PK+RITS + LEH W + +S + +
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 493 bits (1272), Expect = e-174
Identities = 103/344 (29%), Positives = 165/344 (47%), Gaps = 20/344 (5%)
Query: 77 PVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ 136
V L + Y + +++G G + + C +T +A K I K K
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----- 59
Query: 137 DREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
D EI+I+ NI+ + Y+D + V++V EL GGEL DKI+ Q ++E+
Sbjct: 60 --RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE 117
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFI-DEGKVY 254
A+A+ I V + H GV+HRDLKP N L ++ G ++ DFG + + E +
Sbjct: 118 ASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 255 RDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWA---ETEKGIFDAILK 310
+A +VAPEVL R Y D+WS GV+LY +L+G PF +T + I I
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237
Query: 311 GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVL 370
G W +SD+AKDLV KML DP +R+T+A VL HPW+ + +
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDA 297
Query: 371 SRMKQ------FRAMNKLKKMALKVIAEALSEEEIKGLKTMFAN 408
+ + + A+N+ + L+ + + + +G+K + +
Sbjct: 298 PHLVKGAMAATYSALNRNQSPVLEPVGRSTLAQR-RGIKKITST 340
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 491 bits (1267), Expect = e-173
Identities = 108/309 (34%), Positives = 174/309 (56%), Gaps = 9/309 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ + RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGG-AMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG--GEASDKPIGSAVLSRMKQFRAMNKL 382
+ AKD +RK+L+++ +KR+T E L HPW+ +A + L ++ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRW 306
Query: 383 KKMALKVIA 391
K + +++
Sbjct: 307 KL-SFSIVS 314
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 491 bits (1265), Expect = e-173
Identities = 104/324 (32%), Positives = 163/324 (50%), Gaps = 25/324 (7%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
P K LG G F I C + ++A K I KR + ++EI
Sbjct: 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEIT 57
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++ G NIV+ + D+ LVMEL +GGELF++I + H++E A+ + R +V+
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS 117
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYVA 265
V H H +GV+HRDLKPEN L ++++ +K DFG + + + + + +Y A
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 266 PEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEK-------GIFDAILKGGVDFES 317
PE+L ++ Y + D+WS GVILY +LSG PF + I I KG FE
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG 237
Query: 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI---------GSA 368
E W +S AKDL++ +L DP KR+ + + + W+++G + S P+ G+A
Sbjct: 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAA 297
Query: 369 VLSRMK-QFRAMNKLKKMALKVIA 391
V + +K F A NK K+ +
Sbjct: 298 VHTCVKATFHAFNKYKREGFCLQN 321
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 484 bits (1249), Expect = e-171
Identities = 112/267 (41%), Positives = 159/267 (59%), Gaps = 2/267 (0%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ Y + LG+G FG C + T YA K I K NK D I RE+++++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLK 76
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L NI++ ED S ++V EL +GGELFD+II + ++E AA + + + + +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRDLKPEN LL +K+ +K DFGLS + +D +G+AYY+APEVL
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 270 RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
R +Y ++ DVWSAGVILYILLSG PPF+ + E I + G F+ W ISD AKD
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMRE 356
L+RKML P RIT+ + LEHPW+++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQK 282
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 483 bits (1247), Expect = e-171
Identities = 99/275 (36%), Positives = 162/275 (58%), Gaps = 3/275 (1%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
Y + +ELG+G F + C +TG +A K I +KL + +D + ++RE +I +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 60
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L NIV + ++ +LV +L +GGELF+ I+A+ Y+E A+ + I+ +
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+CH G++HR+LKPEN LL++K GA +K DFGL++ +++ + + G+ Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
++ Y K +D+W+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363
L+ ML +PKKRIT+ + L+ PW+ +
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 483 bits (1247), Expect = e-171
Identities = 106/283 (37%), Positives = 164/283 (57%), Gaps = 6/283 (2%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQI 147
+ Y +G+ELG GQF I C + TG YA K I KR+L + + RE+I+RE+ I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
++ + NI+ +E++ V L++EL SGGELFD + + TE A + I++
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
VH+ H + H DLKPEN +L +K+ +K DFG++ I+ G +++I G+ +VAP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 267 EVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
E++ G E D+WS GVI YILLSG PF ET++ I DF+ E + S+
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA 368
AKD +R++L++DPK+R+T A+ LEH W++ + + S
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSG 283
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 485 bits (1250), Expect = e-170
Identities = 95/363 (26%), Positives = 167/363 (46%), Gaps = 25/363 (6%)
Query: 4 WGSKERVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQP 63
+KER + ++ + Q ++ QP
Sbjct: 14 KFNKERRRAR-------REIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQP 66
Query: 64 RQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYA 123
+ + + P+ ++ Q Y +GRG + C +TG+ +A
Sbjct: 67 KGTENLYFQSMGPEDELPDW---AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFA 123
Query: 124 CKSILKRKLVNKQD-----REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCS 178
K + + RE +RE I++ ++G +I+ +YE + LV +L
Sbjct: 124 VKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 179 GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238
GELFD + + +EK ++ R+++ V H ++HRDLKPEN LL + ++
Sbjct: 184 KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN---MQIR 240
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-------RSYGKEIDVWSAGVILYILLS 291
+DFG S ++ G+ R++ G+ Y+APE+L+ YGKE+D+W+ GVIL+ LL+
Sbjct: 241 LSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
Query: 292 GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
G PPFW + + I++G F S W S + KDL+ ++L DP+ R+T+ + L+H
Sbjct: 301 GSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360
Query: 352 PWM 354
P+
Sbjct: 361 PFF 363
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 483 bits (1244), Expect = e-169
Identities = 95/377 (25%), Positives = 169/377 (44%), Gaps = 29/377 (7%)
Query: 46 QQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRG 105
H K+ P+ P+ V K + +Y + +ELG G
Sbjct: 4 SHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQ-GSVYDYYDILEELGSG 62
Query: 106 QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165
FG+ + C E +TG + K I + D+ +K EI IM L ++ A+E
Sbjct: 63 AFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH-HPKLINLHDAFE 118
Query: 166 DRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPE 224
D+ + L++E SGGELFD+I A+ + +E R + H H ++H D+KPE
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 225 NFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAG 283
N + K + +K DFGL+ ++ ++ + +A + APE++ R G D+W+ G
Sbjct: 179 NIMCETKKA-SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIG 237
Query: 284 VILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI 343
V+ Y+LLSG+ PF E + + + +F+ + + +S AKD ++ +L ++P+KR+
Sbjct: 238 VLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297
Query: 344 TSAEVLEHPWMREGGEASDKPIGSAVLS---------------------RMKQFRAMNKL 382
T + LEHPW++ I S+ + R+ F ++ K
Sbjct: 298 TVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKH 357
Query: 383 KKMALKVIAEALSEEEI 399
+ ++ +E
Sbjct: 358 RPQEYQIYDSYFDRKEA 374
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 488 bits (1258), Expect = e-168
Identities = 114/429 (26%), Positives = 183/429 (42%), Gaps = 14/429 (3%)
Query: 19 RSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPV 78
+ H + ++++++ V +
Sbjct: 83 IAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQ 142
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
P+ V K + + Y + +ELG G FG+ + TE +TGN++A K ++ D+
Sbjct: 143 YYPQPVEIKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDK 198
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAA 197
E +++EIQ M L +V A+ED + ++ E SGGELF+K+ + +E A
Sbjct: 199 ETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 257
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
R + + H H +H DLKPEN + + K LK DFGL+ +D + +
Sbjct: 258 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVT 316
Query: 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
G+A + APEV + G D+WS GV+ YILLSG+ PF E + + + +
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG-GEASDKPIGSAVLSRMKQ 375
+ IS+ KD +RK+L+ DP R+T + LEHPW+ G D I S SR +
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPS---SRYTK 433
Query: 376 FRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE 435
R K K A L I ++ + + S + + R K
Sbjct: 434 IRDSIKTKYDAWPEPLPPLG--RISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYG 491
Query: 436 TEVKQLMDA 444
TEV + A
Sbjct: 492 TEVGEGQSA 500
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 474 bits (1222), Expect = e-167
Identities = 84/272 (30%), Positives = 148/272 (54%), Gaps = 8/272 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
I + ++LG G FG +L E S+G K+I K + + E I+ EI++++
Sbjct: 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLK 75
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIV 205
L NI++ +ED ++++VME C GGEL ++I++ +E A L + ++
Sbjct: 76 SLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
N + + H V+H+DLKPEN L + + +K DFGL+ + + G+A Y+A
Sbjct: 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 266 PEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
PEV +R + D+WSAGV++Y LL+G PF + + + ++ E ++
Sbjct: 195 PEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECR-PLTP 253
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
A DL+++ML +DP++R ++A+VL H W ++
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 473 bits (1220), Expect = e-167
Identities = 97/288 (33%), Positives = 148/288 (51%), Gaps = 16/288 (5%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN------KQDREDIKR 143
+ Y + LGRG + C T YA K I + ++ RE +
Sbjct: 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA 203
E+ I++ +SG NI++ + YE LV +L GELFD + + +EK + RA
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
++ V+ H + ++HRDLKPEN LL + +K TDFG S +D G+ R++ G+ Y
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSY 189
Query: 264 VAPEVLR-------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
+APE++ YGKE+D+WS GVI+Y LL+G PPFW + + I+ G F
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
S W SD+ KDLV + L+ P+KR T+ E L HP+ ++ +
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVRH 297
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 469 bits (1210), Expect = e-165
Identities = 103/319 (32%), Positives = 159/319 (49%), Gaps = 18/319 (5%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV-----NKQDREDIKRE 144
+ +R Y + K LG G G L E T A K I KRK +++ E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
I+I++ L+ I++ + ++ ++V+EL GGELFDK++ E +
Sbjct: 66 IEILKKLN-HPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 183
Query: 265 APEVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEP 319
APEVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAM 379
W +S+ A DLV+K+L+ DPK R T+ E L HPW++ D+ + + +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ------DEDMKRKFQDLLSEENES 297
Query: 380 NKLKKMALKVIAEALSEEE 398
L ++ + E
Sbjct: 298 TALPQVLAQPSTSRKRPRE 316
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 459 bits (1184), Expect = e-161
Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 36/313 (11%)
Query: 91 DIRQFYTLGKE-LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
Y L ++ LG G C T YA K I K+ R + RE++++
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLY 65
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
G +N++E +E+ +LV E GG + I + H+ E A+ + + + + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD 125
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI--------VGSA 261
H G+ HRDLKPEN L + + + +K DF L I I GSA
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 262 YYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAE---------------T 300
Y+APEV+ Y K D+WS GVILYILLSG PPF
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
+ +F++I +G +F + W IS +AKDL+ K+L++D K+R+++A+VL+HPW++ G A
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCA 303
Query: 361 SDKPIGSA-VLSR 372
+ + + VL R
Sbjct: 304 PENTLPTPMVLQR 316
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 461 bits (1188), Expect = e-160
Identities = 109/375 (29%), Positives = 178/375 (47%), Gaps = 16/375 (4%)
Query: 16 NGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATST 75
+G T + Q+ + ++ + ++ P R + +
Sbjct: 10 SGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAP 69
Query: 76 RPVQKPETVLGKPLEDIRQFYTLGK--ELGRGQFGITYLCTENSTGNSYACKSILKRKLV 133
V K + FYT+ K LG G+FG + C E +TG A K I R +
Sbjct: 70 PAPFDHRIVTAKQ-GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM- 127
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-Y 192
+D+E++K EI +M L N+++ A+E + + LVME GGELFD+II + +
Sbjct: 128 --KDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL 184
Query: 193 TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
TE + I + H H M ++H DLKPEN L N+D +K DFGL+ +
Sbjct: 185 TELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQ-IKIIDFGLARRYKPRE 243
Query: 253 VYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
+ G+ ++APEV+ D+WS GVI Y+LLSG+ PF + + + IL
Sbjct: 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC 303
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLS 371
D E E + IS+ AK+ + K+LI++ RI+++E L+HPW+ SD + S + +
Sbjct: 304 RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL------SDHKLHSRLSA 357
Query: 372 RMKQFRAMNKLKKMA 386
+ K+ R + +
Sbjct: 358 QKKKNRGSDAQDFVT 372
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 458 bits (1181), Expect = e-160
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 25/324 (7%)
Query: 90 EDIRQFYTLGKE-LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
+ Y L K+ LG G G C TG A K + ++E+
Sbjct: 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHH 75
Query: 149 QHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCR 202
SG +IV YE+ ++ + ++ME GGELF +I +G +TE+ AA + R
Sbjct: 76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY 262
I + H + HRD+KPEN L ++K+ A+LK TDFG + + + + Y
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ-TPCYTPY 194
Query: 263 YVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK----GIFDAILKGGVDFES 317
YVAPEVL Y K D+WS GVI+YILL G PPF++ T + G+ I G F +
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA-VLSRMKQF 376
W +S+ AK L+R +L DP +R+T + + HPW+ + P+ +A VL K
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDH 314
Query: 377 RAMNKLKKMALKVIAEA-LSEEEI 399
+++K+ +A + +++
Sbjct: 315 --WDEVKEEMTSALATMRVDYDQV 336
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 447 bits (1151), Expect = e-156
Identities = 89/315 (28%), Positives = 145/315 (46%), Gaps = 39/315 (12%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K I + + LG G G T +A K + QD +RE++
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 62
Query: 147 IMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAAL 200
+ S +IV YE+ R+ + +VME GGELF +I +G +TE+ A+ +
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++I + + H + + HRD+KPEN L ++K A+LK TDFG
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---------------- 166
Query: 261 AYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGIFDAILKGGVDFE 316
A E Y K D+WS GVI+YILL G PPF++ G+ I G +F
Sbjct: 167 ----AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 222
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376
+ W +S+ K L+R +L +P +R+T E + HPW+ + + P+ ++ + + +
Sbjct: 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 282
Query: 377 RAMNKLKKMALKVIA 391
R +K+ +A
Sbjct: 283 R-WEDVKEEMTSALA 296
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 430 bits (1106), Expect = e-149
Identities = 100/340 (29%), Positives = 153/340 (45%), Gaps = 52/340 (15%)
Query: 74 STRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL- 132
++ G L ++++ Y L +G+G +G+ + EN T A K + K K+
Sbjct: 6 HHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR 65
Query: 133 -VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH 191
+N +D E IK E+++M+ L NI YED Q + LVMELC GG L DK+
Sbjct: 66 QINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFID 124
Query: 192 ----------------------------------------YTEKAAAALCRAIVNVVHHC 211
EK + + R I + +H+
Sbjct: 125 DSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-----EGKVYRDIVGSAYYVAP 266
H G+ HRD+KPENFL S +K DFGLS E G+ Y+VAP
Sbjct: 185 HNQGICHRDIKPENFLFSTNKS-FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243
Query: 267 EVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323
EVL SYG + D WSAGV+L++LL G PF + +L + FE+ + ++
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363
S A+DL+ +L ++ +R + L+HPW+ + + K
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYK 343
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 432 bits (1112), Expect = e-148
Identities = 101/279 (36%), Positives = 152/279 (54%), Gaps = 12/279 (4%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKRE 144
+ +R Y + K LG G G L E T A + I KRK RE +++ E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
I+I++ L+ I++ + ++ ++V+EL GGELFDK++ E +
Sbjct: 191 IEILKKLN-HPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308
Query: 265 APEVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEP 319
APEVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
W +S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 407
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 332 bits (852), Expect = e-109
Identities = 89/446 (19%), Positives = 164/446 (36%), Gaps = 38/446 (8%)
Query: 71 SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
S+ S E + I + LG G G T + A K IL
Sbjct: 3 SSPSLEQDDGDEETSVVIVGKIS--FCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILPE 59
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG 190
RE+Q+++ N++ + +DRQ ++ +ELC L + + +
Sbjct: 60 CF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKD 112
Query: 191 H-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA--TDFGLSVF 247
+ L + + + H H + ++HRDLKP N L+S + +KA +DFGL
Sbjct: 113 FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
Query: 248 IDEGKVY----RDIVGSAYYVAPEVLRRS----YGKEIDVWSAGVILYILLS-GVPPFWA 298
+ G+ + G+ ++APE+L +D++SAG + Y ++S G PF
Sbjct: 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232
Query: 299 ETEKGIFDAILKGGVDFES-EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
++ IL G + P A++L+ KM+ DP+KR ++ VL+HP+
Sbjct: 233 SLQRQAN--ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW-- 288
Query: 358 GEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTI 417
V R+++ + K + + + + + D K T
Sbjct: 289 SLEKQLQFFQDVSDRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQT-DLRKFRTY 347
Query: 418 TYEELKTGLARLGSKLS---ETEVKQLMDAADVDGNGTIDYIE--FISATMHRYRLER-- 470
++ L R ++ + + + Y F H YR
Sbjct: 348 KGGSVRD-LLRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMELC 406
Query: 471 --DEHLYKAFQYFDKDNSGYITRDEL 494
+ + + + +T D L
Sbjct: 407 SHERLFQPYYFHEPPEPQPPVTPDAL 432
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 311 bits (798), Expect = e-104
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 347 EVLEHPWMRE-GGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTM 405
H RE + S +L +K F+ N+LKK+AL +IA+ L + EI L+ +
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 406 FANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR 465
F +D D SGT++ +E+ GL ++G + ++ Q++ D + +G I Y +F++AT+ +
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK 122
Query: 466 YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD---EASIKEIISEVDTDNDG 522
+ E F++FD D +G I+ +EL+ I + + +I ++ EVD + DG
Sbjct: 123 QTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDG 182
Query: 523 RINYEEFCTMMR 534
I++ EF MM
Sbjct: 183 EIDFHEFMLMMS 194
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 308 bits (790), Expect = e-100
Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 54/342 (15%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ ++ K LG G G + G A K +L + EI+++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFC------DIALMEIKLLT 63
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY-------TEKAAAALCR 202
N++ + + + +++ +ELC L D + ++ E +L R
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM----------LKATDFGLSVFIDEGK 252
I + V H H + ++HRDLKP+N L+S + +DFGL +D G+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 253 VY-----RDIVGSAYYVAPEVLR--------RSYGKEIDVWSAGVILYILLS-GVPPFWA 298
+ G++ + APE+L R + ID++S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 299 ETEKGIFDAILKGGVDF---ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ + I++G + + A DL+ +M+ DP KR T+ +VL HP
Sbjct: 243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300
Query: 356 EGG-------EASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390
+ SD+ + +R + K + VI
Sbjct: 301 PKSKKLEFLLKVSDR---LEIENRDPPSALLMKFDAGSDFVI 339
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = 1e-99
Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 349 LEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFAN 408
+ H G + G VL K + + K +K+A+ +IA+ ++ +++ LK+ F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 409 MDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL 468
+D D G IT E+LK GL + G KL L+D D DG+G IDY EFI+A + R +L
Sbjct: 61 LDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQL 119
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG------IGDEASIKEIISEVDTDNDG 522
+ + +Y AF+ FD DN G IT EL + + D +K +I +VD +NDG
Sbjct: 120 SK-KLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDG 178
Query: 523 RINYEEFCTMMR 534
+I++ EF MM+
Sbjct: 179 KIDFHEFSEMMK 190
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 2e-94
Identities = 94/306 (30%), Positives = 140/306 (45%), Gaps = 11/306 (3%)
Query: 54 PKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLC 113
P + P A + P K + R+ Y G+ LG+G F +
Sbjct: 2 PAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRR-YVRGRFLGKGGFAKCFEI 60
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173
++ T +A K + K L+ RE + EI I + L+ Q++V F G +ED V +V
Sbjct: 61 SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVV 119
Query: 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233
+ELC L + + TE A R IV + H V+HRDLK N L N+D
Sbjct: 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL-NEDL 178
Query: 234 GAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLS 291
+K DFGL+ ++ + + G+ Y+APEVL ++ + E+DVWS G I+Y LL
Sbjct: 179 --EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
Query: 292 GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
G PPF K + I K ++ I+ A L++KML DP R T E+L
Sbjct: 237 GKPPFETSCLKETYLRIKKN--EYSIPKH--INPVAASLIQKMLQTDPTARPTINELLND 292
Query: 352 PWMREG 357
+ G
Sbjct: 293 EFFTSG 298
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 3e-91
Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 10/264 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y G+ LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQ 75
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
++V F G +ED V +V+ELC L + + TE A R IV + H
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL-RRSY 273
V+HRDLK N L N+D +K DFGL+ ++ + + G+ Y+APEVL ++ +
Sbjct: 136 VIHRDLKLGNLFL-NEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
E+DVWS G I+Y LL G PPF K + I K ++ I+ A L++K
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKH--INPVAASLIQK 248
Query: 334 MLIQDPKKRITSAEVLEHPWMREG 357
ML DP R T E+L + G
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSG 272
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 274 bits (704), Expect = 8e-91
Identities = 101/164 (61%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKL 433
KQF AMNK KKMAL+VIAE+LSEEEI GLK MF +D DKSG IT+EELK GL R+G+ L
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60
Query: 434 SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
E+E+ LM AADVD +GTIDY EFI+AT+H ++ER++HL+ AF YFDKD SGYIT DE
Sbjct: 61 KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 494 LETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
L+ A +++G+ D I+E++ +VD DNDGRI+Y EF MM+ G+
Sbjct: 121 LQQACEEFGVEDV-RIEELMRDVDQDNDGRIDYNEFVAMMQKGS 163
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 275 bits (704), Expect = 1e-88
Identities = 63/303 (20%), Positives = 118/303 (38%), Gaps = 43/303 (14%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+ L LG+G + TG+ +A K + D RE ++++ L
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKL 64
Query: 152 SGQQNIVEFRGAYEDRQSVH--LVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVN 206
+ +NIV+ E+ + H L+ME C G L+ + + E + R +V
Sbjct: 65 N-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 207 VVHHCHFMGVMHRDLKPENFLLS-NKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
++H G++HR++KP N + +DG ++ K TDFG + +++ + + + G+ Y+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLH 183
Query: 266 PEVLRRS---------YGKEIDVWSAGVILYILLSGVPPFWA----ETEKGIFDAILKGG 312
P++ R+ YG +D+WS GV Y +G PF K + I+ G
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Query: 313 V-----------------DFESEPWLLISDSAKDLV----RKMLIQDPKKRITSAEVLEH 351
+ +S + L+ +L D +K +
Sbjct: 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
Query: 352 PWM 354
Sbjct: 304 TSD 306
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 269 bits (689), Expect = 3e-88
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 363 KPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSE-EEIKGLKTMFANMDTDKSGTITYEE 421
K + L MK+F++ KL + A+ + L+ EE K L +F +D + G + +E
Sbjct: 2 KHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKE 61
Query: 422 LKTGLAR-----------LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470
L G + L S E EV ++ + D D NG I+Y EF++ M + L
Sbjct: 62 LIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS 121
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFC 530
E L AFQ FD D SG IT +EL + DE + +++ E D +NDG +++EEF
Sbjct: 122 RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDE-TWHQVLQECDKNNDGEVDFEEFV 180
Query: 531 TMMRSGT 537
MM+
Sbjct: 181 EMMQKIC 187
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 270 bits (694), Expect = 1e-87
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 11/274 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G LG+G F Y TG A K I K+ + + ++ E++I L
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFM 214
+I+E +ED V+LV+E+C GE+ + + ++E A I+ + + H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL-RRS 272
G++HRDL N LL +K DFGL+ + + G+ Y++PE+ R +
Sbjct: 132 GILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
+G E DVWS G + Y LL G PPF +T K + ++ D+E + +S AKDL+
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIEAKDLIH 244
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
++L ++P R++ + VL+HP+M K G
Sbjct: 245 QLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 8e-87
Identities = 82/264 (31%), Positives = 138/264 (52%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL-RRSY 273
V+HRD+KPEN LL + LK DFG SV + R + G+ Y+ PE++ R +
Sbjct: 130 VIHRDIKPENLLLGSAG---ELKIADFGWSVHAPSSR--RTDLCGTLDYLPPEMIEGRMH 184
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
+++D+WS GV+ Y L G PPF A T + + I + +F + +++ A+DL+ +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFPDF--VTEGARDLISR 240
Query: 334 MLIQDPKKRITSAEVLEHPWMREG 357
+L +P +R EVLEHPW+
Sbjct: 241 LLKHNPSQRPMLREVLEHPWITAN 264
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 266 bits (683), Expect = 6e-86
Identities = 88/302 (29%), Positives = 154/302 (50%), Gaps = 20/302 (6%)
Query: 73 TSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL 132
T+ + K + + + +G+ LG+G+FG YL E A K + K +L
Sbjct: 1 TALAEMPKRKFTIDD--------FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL 52
Query: 133 VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY 192
+ ++REI+I HL NI+ + DR+ ++L++E GEL+ ++ G +
Sbjct: 53 EKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF 111
Query: 193 TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
E+ +A + + +H+CH V+HRD+KPEN L+ LK DFG SV +
Sbjct: 112 DEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPSLR 168
Query: 253 VYRDIV-GSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK 310
R + G+ Y+ PE++ +++ +++D+W AGV+ Y L G+PPF + + I+
Sbjct: 169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Query: 311 GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVL 370
D + P+L SD +KDL+ K+L P +R+ V+EHPW++ P+ +
Sbjct: 227 V--DLKFPPFL--SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQ 282
Query: 371 SR 372
S+
Sbjct: 283 SK 284
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 265 bits (680), Expect = 3e-85
Identities = 65/295 (22%), Positives = 118/295 (40%), Gaps = 41/295 (13%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ LG+G FG YA K I ++ I E+ ++ L+ Q
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLN-HQ 62
Query: 156 NIVEFRGAYEDRQSVH-------------LVMELCSGGELFDKIIAQGHYTEKAAAA-LC 201
+V + A+ +R++ + ME C G L+D I ++ ++ L
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 202 RAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI---- 257
R I+ + + H G++HRDLKP N + +K DFGL+ + +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 258 -----------VGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGI 304
+G+A YVA EVL + Y ++ID++S G+I + ++ P I
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNI 237
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359
+ ++F + K ++R ++ DP KR + +L W+ +
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 267 bits (684), Expect = 7e-85
Identities = 79/382 (20%), Positives = 143/382 (37%), Gaps = 35/382 (9%)
Query: 42 QQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIR---QFYTL 98
+ P + + + + + E I + Y++
Sbjct: 1 HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSI 60
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-QNI 157
K++G G + N YA K + + + Q + + EI + L I
Sbjct: 61 LKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKI 118
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
+ Q +++VME C +L + + + + ++ VH H G++
Sbjct: 119 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRD-IVGSAYYVAPEVLRRS-- 272
H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE ++
Sbjct: 178 HSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 273 ----------YGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWL 321
+ DVWS G ILY + G PF + AI+ + E
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI- 292
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA------VLSRMKQ 375
+D+++ L +DPK+RI+ E+L HP+++ ++ VL ++
Sbjct: 293 -PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVG 351
Query: 376 FRAMNKLKKMALKVIAEALSEE 397
+ N + K A + E
Sbjct: 352 LNSPNSILKAAKTLYEHYSGGE 373
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 9e-85
Identities = 49/371 (13%), Positives = 102/371 (27%), Gaps = 45/371 (12%)
Query: 37 PYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFY 96
++ + ++ + +++ + P TV + R+
Sbjct: 6 AGDSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERK-L 64
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL----- 151
L + L G + +L + +A K ++ + E + L
Sbjct: 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESP 124
Query: 152 ------------------SGQQNIVEFRGAYEDR--QSVHLVMELCSG------GELFDK 185
Q + +D + L+M S L
Sbjct: 125 EEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFV 184
Query: 186 IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
+ +G A L ++ + + G++H P+N + DG L D
Sbjct: 185 YVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM-PDG--RLMLGDVSAL 241
Query: 246 VFIDEGKVYRDIVGSAYYVAPEVLRRS---YGKEIDVWSAGVILYILLSGVPPFWAETEK 302
G Y E L S + ++ W G+ +Y + PF T
Sbjct: 242 W--KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299
Query: 303 GIFDAILKGGVDFESEPWLL-----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
++ + D K L+ + L D ++R+ E +E P +
Sbjct: 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359
Query: 358 GEASDKPIGSA 368
+ +
Sbjct: 360 QNEISSSLSTG 370
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 265 bits (678), Expect = 2e-84
Identities = 75/326 (23%), Positives = 132/326 (40%), Gaps = 32/326 (9%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ- 154
Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 11 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHS 68
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
I+ Q +++VME C +L + + + + ++ VH H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--VYRD-IVGSAYYVAPEVLRR 271
G++H DLKP NFL+ + MLK DFG++ + V +D VG+ Y+ PE ++
Sbjct: 128 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 272 S------------YGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESE 318
+ DVWS G ILY + G PF + AI+ + E
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA------VLSR 372
+D+++ L +DPK+RI+ E+L HP+++ ++ VL +
Sbjct: 244 DI--PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQ 301
Query: 373 MKQFRAMNKLKKMALKVIAEALSEEE 398
+ + N + K A + E
Sbjct: 302 LVGLNSPNSILKAAKTLYEHYSGGES 327
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 263 bits (674), Expect = 3e-84
Identities = 72/323 (22%), Positives = 128/323 (39%), Gaps = 33/323 (10%)
Query: 64 RQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYA 123
+ + +V G+ Y++ K++G G + N YA
Sbjct: 5 HHHSSGVDLGTENLYFQSMSVKGRI-------YSILKQIGSGGSSKVFQVL-NEKKQIYA 56
Query: 124 CKSILKRKLVNKQDREDIKREIQIMQHLSGQ-QNIVEFRGAYEDRQSVHLVMELCSGGEL 182
K + + + Q + + EI + L I+ Q +++VME C +L
Sbjct: 57 IKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL 114
Query: 183 FDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
+ + + + ++ VH H G++H DLKP NFL+ + MLK DF
Sbjct: 115 NSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDF 170
Query: 243 GLSVFI--DEGKVYRD-IVGSAYYVAPEVLRRS------------YGKEIDVWSAGVILY 287
G++ + D V +D VG+ Y+ PE ++ + DVWS G ILY
Sbjct: 171 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
Query: 288 ILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA 346
+ G PF + AI+ + E +D+++ L +DPK+RI+
Sbjct: 231 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRISIP 288
Query: 347 EVLEHPWMREGGEASDKPIGSAV 369
E+L HP+++ ++
Sbjct: 289 ELLAHPYVQIQTHPVNQMAKGTT 311
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 262 bits (672), Expect = 8e-84
Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 13/308 (4%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-H 73
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV+ E ++++L+ME SGGE+FD ++A G EK A + R IV+ V +CH
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
++HRDLK EN LL D +K DFG S G G+ Y APE+ + + Y
Sbjct: 134 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
G E+DVWS GVILY L+SG PF + K + + +L+G + ++ S ++L++
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--KYRIPFYM--STDCENLLK 246
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMAL--KVI 390
+ L+ +P KR T ++++ W+ G E + + + ++ + M + I
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGMGYSQEEI 306
Query: 391 AEALSEEE 398
E+LS+ +
Sbjct: 307 QESLSKMK 314
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 261 bits (668), Expect = 2e-83
Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 28/312 (8%)
Query: 62 QPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNS 121
+P Q P T T P GK E Y LG LG+G FG + +
Sbjct: 5 KPLQGPPAPPGTPTPPPG------GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQ 58
Query: 122 YACKSILKRKLVNKQDRED---IKREIQIMQHLSGQQ---NIVEFRGAYEDRQSVHLVME 175
A K I + +++ D E+ ++ + ++ +E ++ LV+E
Sbjct: 59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE 118
Query: 176 L-CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234
+LFD I +G E + +V + HCH GV+HRD+K EN L+ + G
Sbjct: 119 RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG- 177
Query: 235 AMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY-GKEIDVWSAGVILYILLSG 292
K DFG + + Y D G+ Y PE + Y VWS G++LY ++ G
Sbjct: 178 -CAKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
Query: 293 VPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
PF E ++ I +A + + S L+R+ L P R + E+L P
Sbjct: 236 DIPF--ERDQEILEA------ELHFPAHV--SPDCCALIRRCLAPKPSSRPSLEEILLDP 285
Query: 353 WMREGGEASDKP 364
WM+ E
Sbjct: 286 WMQTPAEDVPLN 297
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 5e-83
Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 28/325 (8%)
Query: 47 QQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQ 106
H P+ AT P ++ E + + Y +G LG G
Sbjct: 4 SHHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQ--------YQVGPLLGSGG 55
Query: 107 FGITYLCTENSTGNSYACKSILKRKLVNKQDRED---IKREIQIMQHLS-GQQNIVEFRG 162
FG Y S A K + K ++ + + + + E+ +++ +S G ++
Sbjct: 56 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115
Query: 163 AYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+E S L++E +LFD I +G E+ A + ++ V HCH GV+HRD+
Sbjct: 116 WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDI 175
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY-GKEIDV 279
K EN L+ G LK DFG + + Y D G+ Y PE +R Y G+ V
Sbjct: 176 KDENILIDLNRG--ELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAV 232
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G++LY ++ G PF + E I++G + S + L+R L P
Sbjct: 233 WSLGILLYDMVCGDIPFEHDEE------IIRG--QVFFRQRV--SSECQHLIRWCLALRP 282
Query: 340 KKRITSAEVLEHPWMREGGEASDKP 364
R T E+ HPWM++ +
Sbjct: 283 SDRPTFEEIQNHPWMQDVLLPQETA 307
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 262 bits (670), Expect = 1e-82
Identities = 64/302 (21%), Positives = 121/302 (40%), Gaps = 43/302 (14%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+ L LG+G + TG+ +A K + D RE ++++ L
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKL 64
Query: 152 SGQQNIVEFRGAYEDRQSVH--LVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVN 206
+ +NIV+ E+ + H L+ME C G L+ + + E + R +V
Sbjct: 65 N-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 207 VVHHCHFMGVMHRDLKPENFLLS-NKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
++H G++HR++KP N + +DG ++ K TDFG + +++ + + + G+ Y+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLH 183
Query: 266 PEVLRRS---------YGKEIDVWSAGVILYILLSGVPPFWA----ETEKGIFDAILKG- 311
P++ R+ YG +D+WS GV Y +G PF K + I+ G
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Query: 312 --------------GVDFESE--PWLLISDSAKDLV----RKMLIQDPKKRITSAEVLEH 351
+D+ + +S + L+ +L D +K +
Sbjct: 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
Query: 352 PW 353
Sbjct: 304 TS 305
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 261 bits (667), Expect = 1e-82
Identities = 57/379 (15%), Positives = 109/379 (28%), Gaps = 61/379 (16%)
Query: 24 HSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTR--PVQKP 81
H H + +Q ++L + P+ + Q S ST +P
Sbjct: 2 HHHHHHSSGRENLYFQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQP 61
Query: 82 ETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI 141
V + E R G LG+ T+ TG S+ + + +
Sbjct: 62 FRVESELGERPRT-LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQM 120
Query: 142 KREIQIMQHL------------------------SGQQNIVEFRGAYEDRQ--SVHLVME 175
K E+ ++ L ++ ++ R D S +
Sbjct: 121 KEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP 180
Query: 176 LCS------GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229
G L A L ++ ++ H G++H L+P + +L
Sbjct: 181 RMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD 240
Query: 230 NKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL------------RRSYGKEI 277
+ G + T F V S + PE+ R
Sbjct: 241 -QRG--GVFLTGFEHLVRDGA---RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSF 294
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W+ G+++Y + P + G + I + + I + L+ L
Sbjct: 295 DAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRY 346
Query: 338 DPKKRITSAEVLEHPWMRE 356
+ R+ + +E P +
Sbjct: 347 PKEDRLLPLQAMETPEYEQ 365
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 257 bits (659), Expect = 2e-82
Identities = 101/265 (38%), Positives = 133/265 (50%), Gaps = 10/265 (3%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y LG LG G FG + TG+ A K + ++K+ + IKREIQ ++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-H 70
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+I++ +VME SGGELFD I G E A L + I++ V +CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
V+HRDLKPEN LL D K DFGLS + +G+ R GS Y APEV+ R Y
Sbjct: 131 MVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
G E+D+WS GVILY LL G PF E +F I G F +L + S L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYL--NRSVATLLM 243
Query: 333 KMLIQDPKKRITSAEVLEHPWMREG 357
ML DP KR T ++ EH W ++
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQD 268
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 257 bits (658), Expect = 2e-82
Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 14/275 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ + IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI---VGSAYYVAPEVL-RR 271
+ HRD+KPEN LL D LK +DFGL+ R + G+ YVAPE+L RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 SY-GKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSAKD 329
+ + +DVWS G++L +L+G P+ ++ + + PW I +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLA 240
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
L+ K+L+++P RIT ++ + W + + K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 1e-81
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 365 IGSAVLSRMKQFRAMNKLKKMALKVIAEALS--EEEIKGLKTMFANMDTDKSGTITYEEL 422
I VL+ MK + + ++ + + ++A LS IK + +F +DT+ +G++++ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 423 KTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482
T LA +G + + ++ +++ A D++ G I Y EF++ +E L AF D
Sbjct: 62 YTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIE-STFLKAAFNKID 118
Query: 483 KDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDG--------RINYEEFCTMMR 534
KD GYI++ ++ + + D + + I V + G +I+++EF M
Sbjct: 119 KDEDGYISKSDIVSLVHDKVLDNN-DIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177
Query: 535 S 535
S
Sbjct: 178 S 178
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 257 bits (658), Expect = 3e-81
Identities = 96/336 (28%), Positives = 150/336 (44%), Gaps = 24/336 (7%)
Query: 68 MKSSATSTRPVQKPETV-LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
M + +T P+ P + Y K++G G FG+ L + T A K
Sbjct: 1 MDRAPVTTGPLDMPIMHDSDR--------YDFVKDIGSGNFGVARLMRDKLTKELVAVKY 52
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
I + +++ ++REI + L NIV F+ + ++ME SGGEL+++I
Sbjct: 53 IERGAAIDEN----VQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERI 107
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
G ++E A + +++ V +CH M + HRDLK EN LL LK DFG S
Sbjct: 108 CNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP-RLKICDFGYSK 166
Query: 247 FIDEGKVYRDIVGSAYYVAPEVL-RRSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGI 304
+ VG+ Y+APEVL R+ Y GK DVWS GV LY++L G PF E
Sbjct: 167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
Query: 305 F----DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
+ IL + + IS L+ ++ + DP RI+ E+ H W + A
Sbjct: 227 YRKTIQRILSV--KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPA 284
Query: 361 SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSE 396
+ + + M L + +++I+EA
Sbjct: 285 DLMNESNTGSQFQEPEQPMQSLDTI-MQIISEATIP 319
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 254 bits (650), Expect = 1e-80
Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 14/275 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ + IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI---VGSAYYVAPEVL-RR 271
+ HRD+KPEN LL D LK +DFGL+ R + G+ YVAPE+L RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 SY-GKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSAKD 329
+ + +DVWS G++L +L+G P+ ++ + + PW I +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLA 240
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
L+ K+L+++P RIT ++ + W + + K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 254 bits (650), Expect = 3e-80
Identities = 69/358 (19%), Positives = 142/358 (39%), Gaps = 53/358 (14%)
Query: 61 PQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGN 120
P + + S+ ++ + K K + D Y + + L +G+F LC +
Sbjct: 2 PLGSMKDILSNYSNLIYLNKYVKEKDKYIND----YRIIRTLNQGKFNKIILCEK--DNK 55
Query: 121 SYACKSILKRKLVNKQDR--------------EDIKREIQIMQHLSGQQNIVEFRGAYED 166
YA K K L K+D +D K E+QI+ + + + G +
Sbjct: 56 FYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYCLTCEGIITN 114
Query: 167 RQSVHLVMELCSGGELFDKIIAQGH--------YTEKAAAALCRAIVNVVHHCH-FMGVM 217
V+++ E + + + ++++N + H +
Sbjct: 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC 174
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS---YG 274
HRD+KP N L+ D +K +DFG S ++ + K+ + G+ ++ PE G
Sbjct: 175 HRDVKPSNILM---DKNGRVKLSDFGESEYMVDKKI-KGSRGTYEFMPPEFFSNESSYNG 230
Query: 275 KEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDF---------------ESE 318
++D+WS G+ LY++ V PF + + +F+ I +++ +
Sbjct: 231 AKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTC 290
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376
+S+ D ++ L ++P +RITS + L+H W+ + + + + K+
Sbjct: 291 SNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKRKKL 348
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 5e-79
Identities = 94/308 (30%), Positives = 145/308 (47%), Gaps = 13/308 (4%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y + + LG G FG L T T A K I ++ L ++REI ++ L
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-H 68
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+I++ + +V+E GGELFD I+ + TE + I+ + +CH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
++HRDLKPEN LL D +K DFGLS + +G + GS Y APEV+ + Y
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
G E+DVWS G++LY++L G PF E +F + + +L S A+ L+R
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC--VYVMPDFL--SPGAQSLIR 240
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSR--MKQFRAMNKLKKMALKVI 390
+M++ DP +RIT E+ PW +P+ S + + + + I
Sbjct: 241 RMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYI 300
Query: 391 AEALSEEE 398
EAL +E
Sbjct: 301 VEALRSDE 308
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 5e-79
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR----------------- 138
YTL E+G+G +G+ L + YA K + K+KL+ +
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 139 ------EDIKREIQIMQHLSGQQNIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQG 190
E + +EI I++ L N+V+ +D +++V EL + G + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLK 132
Query: 191 HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFID 249
+E A + ++ + + H+ ++HRD+KP N L+ +K DFG+S F
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG---HIKIADFGVSNEFKG 189
Query: 250 EGKVYRDIVGSAYYVAPEVL---RRSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305
+ + VG+ ++APE L R+ + GK +DVW+ GV LY + G PF E +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
I ++F +P I++ KDL+ +ML ++P+ RI E+ HPW+
Sbjct: 250 SKIKSQALEFPDQPD--IAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 5e-79
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 37/315 (11%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
M+ +P + +A QK Y+ LG G FG + +
Sbjct: 1 MALEEPPKAVELEGLAACEGEYSQK---------------YSTMSPLGSGAFGFVWTAVD 45
Query: 116 NSTGNSYACKSILKRKLVNKQDRED-----IKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170
K I K K++ ED + EI I+ + NI++ +E++
Sbjct: 46 KEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFENQGFF 104
Query: 171 HLVMEL-CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229
LVME SG +LF I E A+ + R +V+ V + ++HRD+K EN ++
Sbjct: 105 QLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI- 163
Query: 230 NKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY-GKEIDVWSAGVILY 287
+K DFG + +++ GK++ G+ Y APEVL Y G E+++WS GV LY
Sbjct: 164 --AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLY 221
Query: 288 ILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
L+ PF + ++ + S LV +L P++R T +
Sbjct: 222 TLVFEENPFCE------LEETVEA--AIHPPYLV--SKELMSLVSGLLQPVPERRTTLEK 271
Query: 348 VLEHPWMREGGEASD 362
++ PW+ + +D
Sbjct: 272 LVTDPWVTQPVNLAD 286
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 254 bits (651), Expect = 7e-79
Identities = 100/286 (34%), Positives = 142/286 (49%), Gaps = 18/286 (6%)
Query: 74 STRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV 133
+ + +G Y LG LG G FG + TG+ A K + ++K+
Sbjct: 4 AEKQKHDGRVKIGH--------YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR 55
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYT 193
+ I+REIQ ++ +I++ + +VME SGGELFD I G
Sbjct: 56 SLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLD 114
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
EK + L + I++ V +CH V+HRDLKPEN LL D K DFGLS + +G+
Sbjct: 115 EKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEF 171
Query: 254 YRDIVGSAYYVAPEVLR-RSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
R GS Y APEV+ R Y G E+D+WS+GVILY LL G PF + +F I G
Sbjct: 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG 231
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
F + +L + S L++ ML DP KR T ++ EH W ++
Sbjct: 232 --IFYTPQYL--NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 246 bits (631), Expect = 7e-78
Identities = 78/302 (25%), Positives = 119/302 (39%), Gaps = 15/302 (4%)
Query: 57 SAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTEN 116
S Q QPR+ + A+ +Q P +P +Q + LG G +G +
Sbjct: 22 SMHQLQPRRVSFRGEASE--TLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSK 79
Query: 117 STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176
G YA K +DR E+ + + V A+E+ ++L EL
Sbjct: 80 EDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL 138
Query: 177 CSGGELFDKIIAQGHY-TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
C G L A G E R + + H H G++H D+KP N L G
Sbjct: 139 C-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG-PRG-- 194
Query: 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVP- 294
K DFGL V + G Y+APE+L+ SYG DV+S G+ + + +
Sbjct: 195 RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMEL 254
Query: 295 PFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
P E + + L E +S + ++ ML DPK R T+ +L P +
Sbjct: 255 PHGGEGWQQLRQGYLPP------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308
Query: 355 RE 356
R+
Sbjct: 309 RQ 310
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 246 bits (630), Expect = 1e-77
Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%)
Query: 320 WLLISDSAKDLVRKMLIQDPK--KRITSAEVLEHPW--MREGGEASDKPIGSAVLSRMKQ 375
I+ ++ K+ D K + E E R A + + S +
Sbjct: 43 EAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDD 102
Query: 376 FRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE 435
N+L+ LSEE+ L+ +F + SG ++++LK LA+ + E
Sbjct: 103 ASGYNRLR-----PSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPE 157
Query: 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+K+L + D G + YI ++ L F+ D +++G ++R E
Sbjct: 158 GPLKKLFVMVENDTKGRMSYITLVAVANDL------AALVADFRKIDTNSNGTLSRKEFR 211
Query: 496 TAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
G ++ + D D + + E+ +
Sbjct: 212 EHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL 253
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 4e-24
Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 10/165 (6%)
Query: 372 RMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS 431
++ +K + L+ +E+ L + + E + AR +
Sbjct: 27 KLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAERERE-AARGDA 85
Query: 432 KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE--HLYKAFQYFDKDNSGYI 489
+ + L+ + D +G + L ++ L + F SG
Sbjct: 86 AAEKQRLASLLKDLEDDASGYNRLRPS------KPMLSEEDTNILRQLFLSSAVSGSGKF 139
Query: 490 TRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533
+ +L+ + Y E +K++ V+ D GR++Y +
Sbjct: 140 SFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA 184
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 7e-12
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDYIEFIS 460
L+ ++A D DKSG ++ EE++ L + + + + DVD + ++ Y EF+
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Query: 461 ATMHRYRLE 469
+ + +
Sbjct: 315 LVLLMFHDD 323
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 8e-09
Identities = 18/154 (11%), Positives = 51/154 (33%), Gaps = 10/154 (6%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
EA ++ + L+ + +D + ++E + L ++ + E K + D
Sbjct: 11 EANVKKVHENLEELQKKLD---HTSFAHKEDRDRLEAQIAQKEQ-EQKAKLAEYDQKVQN 66
Query: 452 TIDYIEFISATMHRYRLE---RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEAS 508
D E R + + L + + D SGY + + +
Sbjct: 67 EFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNI--- 123
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
++++ G+ ++++ ++ +
Sbjct: 124 LRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPE 157
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 4e-08
Identities = 19/148 (12%), Positives = 37/148 (25%), Gaps = 42/148 (28%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+ L ++ +F D D+S + + E L ++ L AD
Sbjct: 210 FREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLG------LCLLVLRILYAFAD 263
Query: 447 VDGNGTIDYIEFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD 505
D +G + E + F D D
Sbjct: 264 FDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVD--------------------- 302
Query: 506 EASIKEIISEVDTDNDGRINYEEFCTMM 533
+ ++Y+EF ++
Sbjct: 303 --------------DSKSLSYQEFVMLV 316
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 6e-77
Identities = 89/150 (59%), Positives = 113/150 (75%), Gaps = 1/150 (0%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
AE LSEEEI GLK +F +DTD SGTIT++ELK GL R+GS+L E+E+K LMDAAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 451 GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIK 510
GTIDY EFI+AT+H +LER+E+L AF YFDKD SGYIT DE++ A KD+G+ D I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI-HID 119
Query: 511 EIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
++I E+D DNDG+I+Y EF MMR
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRKRKGNG 149
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 6e-20
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+ + EE L + F+ D D SG IT +E++ G L + + ++ D D
Sbjct: 75 LNKLEREEN---LVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDN 129
Query: 450 NGTIDYIEFIS--------ATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
+G IDY EF + + R + + +L A D ++ I
Sbjct: 130 DGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIE 178
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 253 bits (646), Expect = 4e-76
Identities = 71/352 (20%), Positives = 133/352 (37%), Gaps = 41/352 (11%)
Query: 76 RPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK 135
R P G + + + LG G FG TG A K + +
Sbjct: 4 RSPSLPTQTCGP--------WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SP 53
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH------LVMELCSGGELFDKIIAQ 189
++RE EIQIM+ L+ N+V R + Q + L ME C GG+L +
Sbjct: 54 KNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 112
Query: 190 GH---YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
+ E L I + + + H ++HRDLKPEN +L + K D G +
Sbjct: 113 ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
Query: 247 FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305
+D+G++ + VG+ Y+APE+L + Y +D WS G + + ++G PF + +
Sbjct: 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW 232
Query: 306 DAILKGGVDFESEPWLLISDS--------------------AKDLVRKMLIQDPKKRITS 345
++ + + ++ + + ++ ML+ ++R T
Sbjct: 233 HGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTD 292
Query: 346 AEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEE 397
+ + + S + + + L+ + L ++
Sbjct: 293 PQNPNVGCFQALDSILSLKLLSVMNMVSGRVHTYPVTENENLQNLKSWLQQD 344
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 2e-75
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 17/186 (9%)
Query: 358 GEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTI 417
G P+GS + M KL+ L A I+GL F +D D S ++
Sbjct: 3 GLVPRGPLGSHMD---AVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSL 54
Query: 418 TYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKA 477
+E + GLA+LG L + E + + D +G+GT+D EF+ A R+ + A
Sbjct: 55 DADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAA 114
Query: 478 FQYFDKDNSGYITRDELETAMKDYGI--------GDEASIKEIISEVD-TDNDGRINYEE 528
F D+ G +T D+L ++ ++ + D ++ DG++ E
Sbjct: 115 FAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAE 174
Query: 529 FCTMMR 534
F
Sbjct: 175 FQDYYS 180
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 2e-74
Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-IKREIQIMQHLSGQ 154
Y +G LG G +G ++ T A K + K+KL + E +K+EIQ+++ L
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 155 QNIVEFRG--AYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+N+++ E++Q +++VME C G E+ D + + + A +++ + +
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEY 124
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID---EGKVYRDIVGSAYYVAPE 267
H G++H+D+KP N LL G LK + G++ + R GS + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 268 VLR--RSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
+ ++ G ++D+WSAGV LY + +G+ PF + +F+ I KG +
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGDC--G 237
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
DL++ ML +P KR + ++ +H W R+ ++ P+
Sbjct: 238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 6e-72
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 21/274 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G G +G S G K + + + +++ + E+ +++ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HP 65
Query: 156 NIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQG----HYTEKAAAALCRAIVNVVH 209
NIV + DR + +++VME C GG+L I + E+ + + +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 210 HCH-----FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RDIVGSAYY 263
CH V+HRDLKP N L K +K DFGL+ ++ + + VG+ YY
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 264 VAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
++PE + SY ++ D+WS G +LY L + +PPF A ++K + I +G +
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-- 240
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
SD +++ +ML R + E+LE+P + E
Sbjct: 241 -SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 224 bits (574), Expect = 5e-69
Identities = 72/265 (27%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +++G G FG L G Y K I ++ + ++RE+ +RE+ ++ ++
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMK-HP 83
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHF 213
NIV++R ++E+ S+++VM+ C GG+LF +I AQ + E I + H H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR-R 271
++HRD+K +N L+ KDG ++ DFG++ ++ +G+ YY++PE+ +
Sbjct: 144 RKILHRDIKSQNIFLT-KDG--TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + D+W+ G +LY L + F A + K + I+ G F L S + LV
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG--SFPPVS-LHYSYDLRSLV 257
Query: 332 RKMLIQDPKKRITSAEVLEHPWMRE 356
++ ++P+ R + +LE ++ +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 9e-69
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 20/307 (6%)
Query: 58 APQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENS 117
Q Q Q P + ++ L + + + K++GRGQF Y
Sbjct: 2 DEQSQGMQGPPVPQFQPQKALRPDMG--YNTLAN----FRIEKKIGRGQFSEVYRAACLL 55
Query: 118 TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177
G A K + L++ + R D +EI +++ L+ N++++ ++ + +++V+EL
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELA 114
Query: 178 SGGELFDKIIAQG----HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233
G+L I E+ + + + H H VMHRD+KP N ++ G
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT-ATG 173
Query: 234 GAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS 291
++K D GL F + +VG+ YY++PE + Y + D+WS G +LY + +
Sbjct: 174 --VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
Query: 292 GVPPFWAETE--KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
PF+ + + I + D+ P S+ + LV + DP+KR V
Sbjct: 232 LQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289
Query: 350 EHPWMRE 356
+
Sbjct: 290 DVAKRMH 296
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 3e-67
Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 16/199 (8%)
Query: 358 GEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKG----LKTMFANMDTDK 413
G K S + K +K A + I +A+ E+ +F D ++
Sbjct: 2 GACGSKGSTSDKGLASDKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNE 61
Query: 414 SGTITYEELKTGLAR-LGSKLSETEVKQLMDAA---------DVDGNGTIDYIEFISATM 463
+G + Y+E+ +G L + V+ + A ++ G+ D++EF+ +
Sbjct: 62 TGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRL 121
Query: 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD--EASIKEIISEVDTDND 521
+ L F D + + +E + A+ + E+D +
Sbjct: 122 MLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGT 181
Query: 522 GRINYEEFCTMMRSGTPQP 540
G + ++EF +
Sbjct: 182 GSVTFDEFAAWASAVKLDA 200
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 4e-67
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 351 HPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMD 410
P + + +PI + + ++ ++ + + ++ + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 411 TDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470
D+SGT+ EL G G +LS ++M D D NG I + EF++
Sbjct: 62 RDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM----- 116
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEF- 529
E Y F + SG + E+ A++ G ++ + + +
Sbjct: 117 -ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWI 175
Query: 530 --CTMMRSGT 537
C
Sbjct: 176 AICAFAAQTR 185
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 11/104 (10%), Positives = 28/104 (26%), Gaps = 38/104 (36%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG----- 451
+ ++ +F +SGT+ E+ L +LG +++ L+ G
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQ-RTSLLLHRLFARGMAFCDLN 172
Query: 452 --------------------------------TIDYIEFISATM 463
+++ +F+
Sbjct: 173 CWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVT 216
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 9e-65
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 371 SRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG 430
+ K + + +K L+EE+ + ++ F DTD SGTI +ELK + LG
Sbjct: 3 YKAKTVVSARRDQKKG----RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALG 58
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFIS-ATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
+ + E+K+++ D DG+GTID+ EF++ T + E + KAF+ FD DNSG I
Sbjct: 59 FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTI 118
Query: 490 TRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
T +L K+ G E ++E+I+E D ++D I+ +EF +M+ +
Sbjct: 119 TIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 205 bits (525), Expect = 3e-64
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 379 MNKLKKMALKVIAEALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETE 437
M+ + K E L+EE+ K F + G+I+ +EL + LG + E
Sbjct: 1 MDDIYK----AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYR----LERDEHLYKAFQYFDKDNSGYITRDE 493
+++++D D DG+GT+D+ EF+ + + + +E L F+ FDK+ GYI +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 494 LETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
L+ ++ G E I+E++ + D +NDGRI+Y+EF M+
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 2e-63
Identities = 64/282 (22%), Positives = 98/282 (34%), Gaps = 32/282 (11%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y ++LG G F L G+ YA K IL +QDRE+ +RE + +
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLF-NHP 86
Query: 156 NIVEFRGAYEDRQS----VHLVMELCSGGELFDKI----IAQGHYTEKAAAALCRAIVNV 207
NI+ + L++ G L+++I TE L I
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----------I 257
+ H G HRDLKP N LL ++ D G
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEG---QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 258 VGSAYYVAPEVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILKGG 312
+ Y APE+ + DVWS G +LY ++ G P+ +KG ++
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ P S + L+ M+ DP +R +L
Sbjct: 264 LSIPQSPRH--SSALWQLLNSMMTVDPHQRPHIPLLLSQLEA 303
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 2e-63
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
+ +F +D + G ++YEE+K +++ + +E ++ + + D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 462 TMHRYR---LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDT 518
+ L ++ D D G +T++E+ + K +GI + E + + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---VAEQVMKADA 118
Query: 519 DNDGRINYEEFCTMM 533
+ DG I EEF
Sbjct: 119 NGDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 2e-18
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTM 532
F+ D + G ++ +E++ + +E ++ I +D D +G I+ EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 533 MRS 535
S
Sbjct: 62 YGS 64
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 2e-11
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
+++ + + LK ++ MD D G +T EE+ + + G +V + +
Sbjct: 63 GSIQGQDLSDDKIG---LKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMK 115
Query: 445 ADVDGNGTIDYIEFI 459
AD +G+G I EF+
Sbjct: 116 ADANGDGYITLEEFL 130
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 3e-63
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 38/280 (13%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + +G G FG + G +Y K + K + E +RE++ + L
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKLD-HV 64
Query: 156 NIVEFRGAYEDR----------------QSVHLVMELCSGGELFDKIIAQ--GHYTEKAA 197
NIV + G ++ + + + ME C G L I + + A
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
L I V + H +++RDLKP N L +K DFGL +
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLV-DTK--QVKIGDFGLVTSLKNDGKRTRS 181
Query: 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
G+ Y++PE + + YGKE+D+++ G+IL LL F + G
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA--FETSKFFTDLRDG----- 234
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ K L++K+L + P+ R ++E+L + +
Sbjct: 235 -IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 211 bits (538), Expect = 5e-63
Identities = 56/379 (14%), Positives = 106/379 (27%), Gaps = 57/379 (15%)
Query: 24 HSSHQATGVATQTPYQTYQQQQQ-----QQLHVQPPKMSAPQPQPRQQPMKSSATSTRPV 78
H H + +Q ++ ++L + P+ + Q S ST
Sbjct: 2 HHHHHHSSGRENLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLW 61
Query: 79 QKPETVLGKPLEDIRQF-YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD 137
+ + R G LG+ T+ TG S+ +
Sbjct: 62 NTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNA 121
Query: 138 REDIKREIQIMQHLSGQQN------------------------IVEFRGAYEDR--QSVH 171
+ +K E+ ++ L G +N ++ R D S
Sbjct: 122 IKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRF 181
Query: 172 LVMELCSG------GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225
+ L A L ++ ++ H G++H L+P +
Sbjct: 182 FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 241
Query: 226 FLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEVLRRS------YGKEI 277
+L + GG L T F V V A +L
Sbjct: 242 IVLD-QRGGVFL--TGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAF 298
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W+ G+ +Y + P + G + I + + I + L+ L
Sbjct: 299 DTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRY 350
Query: 338 DPKKRITSAEVLEHPWMRE 356
+ R+ + +E P +
Sbjct: 351 PKEDRLLPLQAMETPEYEQ 369
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 5e-63
Identities = 98/314 (31%), Positives = 143/314 (45%), Gaps = 33/314 (10%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
M +PR P S +P +P ED + GK LG G F L E
Sbjct: 1 MDGTAAEPR--PGAGSLQHAQPPPQPRKK---RPED----FKFGKILGEGSFSTVVLARE 51
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
+T YA K + KR ++ + + RE +M L V+ ++D + ++ +
Sbjct: 52 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLS 110
Query: 176 LCSGGELFDKIIAQGHYTEKAA---AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD 232
GEL I G + E A IV+ + + H G++HRDLKPEN LL N+D
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILL-NED 166
Query: 233 GGAMLKATDFGLS-VFIDEGKVYRD--IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYI 288
++ TDFG + V E K R VG+A YV+PE+L K D+W+ G I+Y
Sbjct: 167 M--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 289 LLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS--- 345
L++G+PPF A E IF I+K DF + A+DLV K+L+ D KR+
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKLLVLDATKRLGCEEM 280
Query: 346 ---AEVLEHPWMRE 356
+ HP+
Sbjct: 281 EGYGPLKAHPFFES 294
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 2e-62
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 379 MNKLKK-MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
M+K + + + L EE+ + + F+ D + G + Y ELK + LG +L + E
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 438 VKQLMDAADVDGNGTIDYIEFIS-ATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELET 496
+ L+D D +G + Y +F + + + + +AFQ FD D++G I+ L
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120
Query: 497 AMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
K+ G + ++ +I E D D DG IN EF +
Sbjct: 121 VAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 2e-62
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
Query: 378 AMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
+M + A LSEE I K F D D G I+ +EL T + LG ++ E
Sbjct: 2 SMTDQQAEA----RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDE 493
+ +++ D DG+GTID+ EF+ + + + + +E L F+ FDK+ G+I +E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Query: 494 LETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
L ++ G E I++++ + D +NDGRI+++EF MM
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 3e-62
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 391 AEALSEEEIKGLKTMFANMDT-DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
LS ++K L+T F + +T + SG ++ +++ L LG + +++ ++QL+D D G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 450 NGTIDYIEFISATM-----HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG 504
NG ID+ F + + L +AF+ +DK+ +GYI+ D + + +
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET 123
Query: 505 -DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
+ +I E+D D G +++EEF +M G
Sbjct: 124 LSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-14
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
A + E E+ + L+ F D + +G I+ + ++ LA L LS ++ ++D
Sbjct: 76 GARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDE 135
Query: 445 ADVDGNGTIDYIEFI 459
D DG+GT+D+ EF+
Sbjct: 136 IDADGSGTVDFEEFM 150
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 3e-62
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 383 KKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEEL-----KTGLARLGSKLSETE 437
K A+K+ + + IK K MF +D + +G IT +E+ A+L + +T+
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 438 VKQLMDAADVDGNGT-----IDYIEFIS-----ATMHRYRLERDEH------LYKAFQYF 481
Q+ A G G I + +F+ AT + R+E F F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 482 DKDNSGYITRDELETAMKDYGIGD-EASIKEIISEVDTDNDGRINYEEFCTMMR 534
DKD SG IT DE + K GI + + D DN G ++ +E
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 3e-16
Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 378 AMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
+L LK A + +F D D SGTIT +E K G S+ +
Sbjct: 91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED 150
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472
+ D+D G +D E + D
Sbjct: 151 CEATFRHCDLDNAGDLDVDEMTRQ-HLGFWYTLDP 184
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-12
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 11/75 (14%)
Query: 472 EHLYKAFQYFDKDNSGYITRDEL-----ETAMKDYGIGD-EASIKEIISEVDTDNDG--- 522
+ F + D + +G IT DE+ + + ++ E G
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEY 79
Query: 523 --RINYEEFCTMMRS 535
I + +F +
Sbjct: 80 GKEIAFPQFLDGWKQ 94
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 7e-62
Identities = 42/142 (29%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+EE+ + ++ F D D +GTI +ELK + LG + + E+K+++ D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 455 YIEFIS-ATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEI 512
+ +F++ T + E + KAF+ FD D +G I+ L+ K+ G + ++E+
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 513 ISEVDTDNDGRINYEEFCTMMR 534
I E D D DG ++ +EF +M+
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMK 142
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 2e-61
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+ +L EEI+ L+ F D DK G I +L + +G +E E+ +L +++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 450 NGTIDYIEFISATMHRYRLERD-----EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG 504
G +D+ +F+ + E + L AF+ FD + G I+ EL AM+ +G
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL-LG 119
Query: 505 DEAS---IKEIISEVDTDNDGRINYEEFCTMMR 534
+ I+EII +VD + DGR+++EEF MM
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 2e-12
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGL-ARLGSKLSETEVKQLMD 443
M K++AE +K L+ F DT+ G I+ EL+ + A LG ++ ++++++
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIR 132
Query: 444 AADVDGNGTIDYIEFI 459
D++G+G +D+ EF+
Sbjct: 133 DVDLNGDGRVDFEEFV 148
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 196 bits (501), Expect = 2e-60
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGD 505
NGTID+ EF++ M R + D E + +AF+ FDKD +GYI+ EL M + G + D
Sbjct: 61 NGTIDFPEFLTM-MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 506 EASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
E + E+I E D D DG++NYEEF MM +
Sbjct: 120 E-EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 4e-25
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
M + + + SEEEI+ +F D D +G I+ EL+ + LG KL++ EV +++
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 445 ADVDGNGTIDYIEFISATMHRYRLERD-----EHLYKAFQYFDKDNSGYIT 490
AD+DG+G ++Y EF+ M E + + K +
Sbjct: 129 ADIDGDGQVNYEEFV-QMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 201 bits (512), Expect = 4e-60
Identities = 76/315 (24%), Positives = 123/315 (39%), Gaps = 43/315 (13%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
+ + +G+ +E + + L G F Y + +G YA K +L
Sbjct: 4 PGSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS 63
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS--------VHLVMELCSGGE 181
++ I +E+ M+ LSG NIV+F A + L+ ELC G+
Sbjct: 64 N---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQ 119
Query: 182 LFDKII---AQGHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAM 236
L + + ++G + + V H H ++HRDLK EN LLSN+
Sbjct: 120 LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG---T 176
Query: 237 LKATDFGLSVFIDEGKVYRDI-------------VGSAYYVAPEVL----RRSYGKEIDV 279
+K DFG + I Y + Y PE++ G++ D+
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDI 236
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ G ILY+L PF E G I+ G + P L+R ML +P
Sbjct: 237 WALGCILYLLCFRQHPF----EDGAKLRIVNG--KYSIPPHDTQYTVFHSLIRAMLQVNP 290
Query: 340 KKRITSAEVLEHPWM 354
++R++ AEV+
Sbjct: 291 EERLSIAEVVHQLQE 305
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 1e-59
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+++ L+EE+I K FA D D SG+I+ EL T + LG SE EV LM+ DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 450 NGTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DE 506
N I++ EF++ M R D + L +AF+ FDK+ G I+ EL+ + G +
Sbjct: 61 NHAIEFSEFLAL-MSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD 119
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMR 534
A + E++ EV D G IN ++F ++
Sbjct: 120 AEVDEMLREVS-DGSGEINIKQFAALLS 146
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 4e-59
Identities = 70/302 (23%), Positives = 122/302 (40%), Gaps = 46/302 (15%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREI 145
G+ L D + + LGRG FG+ + +YA K I R + RE + RE+
Sbjct: 1 GRYLTD----FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREV 54
Query: 146 QIMQHLSGQQNIVEFRGAYEDRQS------------VHLVMELCSGGELFDKIIAQGHYT 193
+ + L IV + A+ ++ + +++ M+LC L D + +
Sbjct: 55 KALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 194 ---EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
+ I V H G+MHRDLKP N D ++K DFGL +D+
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF-TMDD--VVKVGDFGLVTAMDQ 170
Query: 251 GKVYRDI-------------VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF 296
+ + + VG+ Y++PE + SY ++D++S G+IL+ LL PF
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF 227
Query: 297 WAETEKG-IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ E+ + F +V+ ML P +R + ++E+
Sbjct: 228 STQMERVRTLTDVRNL--KFPPLF-TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284
Query: 356 EG 357
+
Sbjct: 285 DL 286
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 196 bits (501), Expect = 5e-59
Identities = 58/286 (20%), Positives = 115/286 (40%), Gaps = 32/286 (11%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +++G G+FG + C + G YA K K+ L D ++ RE+ L
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHC 211
++V + A+ + + + E C+GG L D I ++ E L + + +
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 212 HFMGVMHRDLKPENFLLSNK----------------DGGAMLKATDFGLSVFIDEGKVYR 255
H M ++H D+KP N +S M K D G I +V
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE- 190
Query: 256 DIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313
G + ++A EVL+ ++ + D+++ + + P + + I +G
Sbjct: 191 --EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQG-- 243
Query: 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359
P +L S +L++ M+ DP++R ++ +++H +
Sbjct: 244 RLPRIPQVL-SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 3e-58
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
++++ K F D++++G IT E L+T L + G ++ ++ + AD GNG I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 456 IEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKE 511
EF+S M R + + L +AF+ FD + +GYI + L+ A+ + G + E
Sbjct: 62 PEFLSM-MGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPH-EFAE 119
Query: 512 IISEVDTDNDGRINYEEFCTMMRS 535
+ +T+ G+I Y+ F M +
Sbjct: 120 FLGITETE-KGQIRYDNFINTMFT 142
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 4e-57
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
+EIK L F +D D SG+++ EE + L V++++D D DGNG +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDF 57
Query: 456 IEFISATMH-RYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIGDE---AS 508
EFI + ++++ L AF+ +D D GYI+ EL +K + D
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRSG 536
+ + I D D DGRI++EEFC ++
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVVGGL 145
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 2e-08
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKL-SETEVKQLMDAA 445
+ E ++ + DTD +G + ++E G+++ K E +++
Sbjct: 28 FMSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIY 84
Query: 446 DVDGNGTIDYIEFISA--TMHRYRL---ERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500
D+D +G I E M L + + + K DKD G I+ +E +
Sbjct: 85 DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144
Query: 501 YGIGDEASI 509
I + +
Sbjct: 145 LDIHKKMVV 153
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 1e-56
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
AE L+EE+I K FA D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
GTID+ EF+S M R E+D E L +AF+ FD+D +G I+ EL M + G + D+
Sbjct: 61 GTIDFPEFLSL-MARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG INYEEF MM S
Sbjct: 120 -EVDEMIREADIDGDGHINYEEFVRMMVS 147
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 187 bits (478), Expect = 7e-55
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 30/274 (10%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ K LG G FG L +GN YA K + K+K+V + E E +I+Q ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FP 101
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA---AALCRAIVNVVHHCH 212
+V+ +++D ++++VME +GGE+F + G ++E A AA IV + H
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH 158
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAPEV 268
+ +++RDLKPEN L+ ++ G ++ TDFG + K + G+ +APE+
Sbjct: 159 SLDLIYRDLKPENLLI-DQQG--YIQVTDFGFA------KRVKGRTWTLCGTPEALAPEI 209
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ Y K +D W+ GV++Y + +G PPF+A+ I++ I+ G V F S S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDL 265
Query: 328 KDLVRKMLIQDPKKRITS-----AEVLEHPWMRE 356
KDL+R +L D KR + ++ H W
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 9e-55
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 368 AVLSRMKQFRAMNKLKKMALKVIAEA--LSEEEIKGLKTMFANMDTD--KSGTITYEELK 423
+S+ K+ AM +++A + EE++ L +F + + G I EE +
Sbjct: 3 CSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ 62
Query: 424 TGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA-TMHRYRLERDEHLYKAFQYFD 482
L R ++ ++ D DV NG I++ EF+ + + E + AF+ +D
Sbjct: 63 LALFRNRNR-RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYD 121
Query: 483 KDNSGYITRDELETAMKDYGIGDEASIKE---------IISEVDTDNDGRINYEEFCTMM 533
+G+I R+EL+ + E + E + D NDG+I+ +E+ +
Sbjct: 122 LRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181
Query: 534 R 534
Sbjct: 182 S 182
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 3e-54
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 29/291 (9%)
Query: 80 KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE 139
P + F L + +G+G FG + +N T YA K + K+K V + +
Sbjct: 2 MPPVFDENEDVNFDHFEIL-RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR 60
Query: 140 DIKREIQIMQHLSGQQN--IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA 197
++ +E+QIMQ L + +V +++D + + +V++L GG+L + H+ E+
Sbjct: 61 NVFKELQIMQGLE---HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV 117
Query: 198 ----AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
L A+ + ++HRD+KP+N LL ++ G + TDF ++ +
Sbjct: 118 KLFICELVMAL----DYLQNQRIIHRDMKPDNILL-DEHGHVHI--TDFNIAAMLPRETQ 170
Query: 254 YRDIVGSAYYVAPEVLRRS----YGKEIDVWSAGVILYILLSGVPPFW---AETEKGIFD 306
+ G+ Y+APE+ Y +D WS GV Y LL G P+ + + K I
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH 230
Query: 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA-EVLEHPWMRE 356
V + S S L++K+L +P +R + +V P+M +
Sbjct: 231 TFETTVVTYPSA----WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 6e-54
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 383 KKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQL 441
++ +A+ +E F M SG T E KT L G ++ + + Q+
Sbjct: 5 NGKSIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQV 62
Query: 442 MDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK-- 499
+ D + +G +D++EFI+A + + ++ L F+ +D D +G I ++EL
Sbjct: 63 YNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAV 122
Query: 500 -----DYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E I + ++D +NDG + EEF M
Sbjct: 123 QALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 8e-54
Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 21/167 (12%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE---------V 438
+ E L + + L F D D G + +E+ R+ ++ T+ V
Sbjct: 24 QFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAV 83
Query: 439 KQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH-----------LYKAFQYFDKDNSG 487
+ V+ + +++ A ER+ + D D G
Sbjct: 84 RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDG 143
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ DEL+T MK + + EA + DTD G++ E + R
Sbjct: 144 TVDVDELKTMMKAFDVPQEA-AYTFFEKADTDKSGKLERTELVHLFR 189
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 7e-14
Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL-------GSKLSETEVKQLMDA 444
+ E+ ++ F + + + E+ + + + L ++
Sbjct: 73 DEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNS 132
Query: 445 A----DVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500
D DG+GT+D E + M + + E Y F+ D D SG + R EL +
Sbjct: 133 YYDVLDDDGDGTVDVDELKTM-MKAFDVP-QEAAYTFFEKADTDKSGKLERTELVHLFRK 190
Query: 501 YGIGDE 506
+ +
Sbjct: 191 FWMEPY 196
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 1e-12
Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Query: 378 AMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
A + + + + +D D GT+ +ELKT + + +
Sbjct: 106 ANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEA 163
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472
+ AD D +G ++ E + ++ +E +
Sbjct: 164 AYTFFEKADTDKSGKLERTELVHL-FRKFWMEPYD 197
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 2e-53
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 15/189 (7%)
Query: 363 KPIGSAVLS--RMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTD--KSGTIT 418
K + ++VL + ++ L L S EI+ L +F + + G I
Sbjct: 9 KHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLIN 68
Query: 419 YEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA-TMHRYRLERDEHLYKA 477
EE + L + K S ++ D D NG + + EF A ++ D+ ++ +
Sbjct: 69 KEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFS 127
Query: 478 FQYFDKDNSGYITRDELETAMKDYGIGD---------EASIKEIISEVDTDNDGRINYEE 528
FQ +D G+I R E++ + E I + E DT +DG+I+ EE
Sbjct: 128 FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 187
Query: 529 FCTMMRSGT 537
+ +++
Sbjct: 188 WRSLVLRHP 196
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 3e-53
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG L ST YA K + K +++ + D E IM + +V+
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQ 133
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
A++D + +++VME GG+L +++ EK A +V + H MG +HR
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEVLRR-----S 272
D+KP+N LL +K G L DFG + +++ + R VG+ Y++PEVL+
Sbjct: 193 DVKPDNMLL-DKSGHLKL--ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
YG+E D WS GV LY +L G PF+A++ G + I+ IS AK+L+
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 309
Query: 333 KMLIQDPKKRITS---AEVLEHPWMRE 356
+ D + R+ E+ H + +
Sbjct: 310 A-FLTDREVRLGRNGVEEIKRHLFFKN 335
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 3e-53
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 30/274 (10%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + + LG G FG +L G YA K + K +V + E E ++ ++
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 66
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA---AALCRAIVNVVHHCH 212
I+ G ++D Q + ++M+ GGELF + + A AA + + + H
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA---EVCLALEYLH 123
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAPEV 268
+++RDLKPEN LL +K+G +K TDFG + K D+ G+ Y+APEV
Sbjct: 124 SKDIIYRDLKPENILL-DKNG--HIKITDFGFA------KYVPDVTYTLCGTPDYIAPEV 174
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ Y K ID WS G+++Y +L+G PF+ ++ IL + F ++
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF----FNEDV 230
Query: 328 KDLVRKMLIQDPKKRI-----TSAEVLEHPWMRE 356
KDL+ +++ +D +R+ + +V HPW +E
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 3e-53
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 17/156 (10%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG--SKLSETEVKQLMDA-------- 444
S+ ++ +KT F +D DK G IT + ++ R S++ K LMD+
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 445 -ADVDGNGTIDYIEFISATMHRYRLERDEHLYK-----AFQYFDKDNSGYITRDELETAM 498
V G ID FI++ + + + + F+ D + I+RDE
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 499 KDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
G+ D+ +DT+NDG ++ EEF
Sbjct: 121 GMLGL-DKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-17
Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 14/139 (10%)
Query: 382 LKKMALKVIAEA-LSEEEIKGLKTMFANM------DTDKSGTITYEELKTGLA-RLGSKL 433
+ MA + E+ + E K L + I + + +
Sbjct: 28 FESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPE 87
Query: 434 SETEVKQLMDAA----DVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
+++ V+ + D + + I E+ L++ +F D +N G +
Sbjct: 88 AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIF-FGMLGLDKTM-APASFDAIDTNNDGLL 145
Query: 490 TRDELETAMKDYGIGDEAS 508
+ +E A D+ + D S
Sbjct: 146 SLEEFVIAGSDFFMNDGDS 164
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 12/79 (15%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG---DEASIKEIISEV--------- 516
+ + F D D G ITR + E+ + + K ++ +
Sbjct: 3 LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLT 62
Query: 517 DTDNDGRINYEEFCTMMRS 535
I+ F M+
Sbjct: 63 AVAGGKGIDETTFINSMKE 81
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 9e-53
Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 22/296 (7%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
S TR Q L L + F + +GRG FG Y C + TG YA K + K
Sbjct: 167 ESDKFTRFCQWKNVELNIHL-TMNDFSVH-RIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQN--IVEFRGAYEDRQSVHLVMELCSGGELFDKII 187
+++ KQ E ++ +S IV A+ + +++L +GG+L +
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 188 AQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247
G ++E I+ + H H V++RDLKP N LL D ++ +D GL+
Sbjct: 285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACD 341
Query: 248 IDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKG-- 303
+ K + VG+ Y+APEVL++ +Y D +S G +L+ LL G PF K
Sbjct: 342 FSKKKPH-ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 400
Query: 304 -IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPW 353
I L V+ S + L+ +L +D +R+ + EV E P+
Sbjct: 401 EIDRMTLTMAVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 182 bits (462), Expect = 2e-52
Identities = 52/319 (16%), Positives = 101/319 (31%), Gaps = 40/319 (12%)
Query: 60 QPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT----- 114
P P KP+ + + + LG G F Y T
Sbjct: 35 SKPVSSYPNTFEWQCKLPAIKPK----TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLN 90
Query: 115 ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174
+ + K + ++ ++F A+ + LV
Sbjct: 91 DAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQ----HMFMKFYSAHLFQNGSVLVG 146
Query: 175 ELCSGGELFDKIIAQGHYTEKA-----AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229
EL S G L + I + EK + ++ ++ H ++H D+KP+NF+L
Sbjct: 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILG 206
Query: 230 NK--------DGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEI 277
N D A L D G S+ +G ++ ++ + E+L + + +I
Sbjct: 207 NGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQI 266
Query: 278 DVWSAGVILYILLSGVPPFWA-ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
D + +Y +L G E + + + + + W + ML
Sbjct: 267 DYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRL--PHLDMW-------NEFFHVMLN 317
Query: 337 QDPKKRITSAEVLEHPWMR 355
+ S ++L +
Sbjct: 318 IPDCHHLPSLDLLRQKLKK 336
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 6e-52
Identities = 85/316 (26%), Positives = 154/316 (48%), Gaps = 14/316 (4%)
Query: 49 LHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFG 108
+H S +S + + ++ D R ++G G G
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQ-GDPRLLLDSYVKIGEGSTG 59
Query: 109 ITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168
I L E +G A K + L +Q RE + E+ IM+ N+VE +Y +
Sbjct: 60 IVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGE 115
Query: 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLL 228
+ ++ME GG L D I++Q E+ A +C A++ + + H GV+HRD+K ++ LL
Sbjct: 116 ELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174
Query: 229 SNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLRRS-YGKEIDVWSAGVIL 286
+ DG K +DFG I + R +VG+ Y++APEV+ RS Y E+D+WS G+++
Sbjct: 175 TL-DGRV--KLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231
Query: 287 YILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
++ G PP+++++ + + + + S +D + +ML++DP++R T+
Sbjct: 232 IEMVDGEPPYFSDSPVQAMK-RLRDSPPPKLKNSHKV-SPVLRDFLERMLVRDPQERATA 289
Query: 346 AEVLEHPWMREGGEAS 361
E+L+HP++ + G
Sbjct: 290 QELLDHPFLLQTGLPE 305
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 1e-51
Identities = 70/267 (26%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG FG + + +A K + K +++ + + + E ++ + + I
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITT 138
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKII-AQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
A++D +++LVM+ GG+L + + E+ A +V + H + +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRD-IVGSAYYVAPEVL------R 270
RD+KP+N L+ + +G ++ DFG +++G V VG+ Y++PE+L +
Sbjct: 199 RDIKPDNILM-DMNG--HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL-LISDSAKD 329
YG E D WS GV +Y +L G PF+AE+ + I+ F+ + +S++AKD
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315
Query: 330 LVRKMLIQDPKKRITS---AEVLEHPW 353
L+R+ LI + R+ + +HP+
Sbjct: 316 LIRR-LICSREHRLGQNGIEDFKKHPF 341
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 1e-50
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +GRG F + TG YA K + K ++ + + + E ++ + ++ I +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQ 125
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMH 218
A++D ++LVME GG+L + G + A IV + H +G +H
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEVLRR----- 271
RD+KP+N LL ++ G L DFG + + R VG+ Y++PE+L+
Sbjct: 186 RDIKPDNILL-DRCGHIRL--ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 272 ---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL-ISDSA 327
SYG E D W+ GV Y + G PF+A++ + I+ + + A
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 328 KDLVRKMLIQDPKKRITS---AEVLEHPW 353
+D +++ L+ P+ R+ + HP+
Sbjct: 303 RDFIQR-LLCPPETRLGRGGAGDFRTHPF 330
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 2e-50
Identities = 62/271 (22%), Positives = 122/271 (45%), Gaps = 16/271 (5%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F E+GRG F Y + T A + RKL K +R+ K E ++++ L
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ- 83
Query: 154 QQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
NIV F ++E ++ + LV EL + G L + K + CR I+ +
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQ 143
Query: 210 --HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
H ++HRDLK +N ++ G +K D GL+ + ++G+ ++APE
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRASFA-KAVIGTPEFMAPE 200
Query: 268 VLRRSYGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAILKGGVDFESEPWLLISD 325
+ Y + +DV++ G+ + + + P ++E + I+ + G + +
Sbjct: 201 MYEEKYDESVDVYAFGMCMLEMATSEYP-YSECQNAAQIYRRVTSG--VKPASFDKVAIP 257
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
K+++ + Q+ +R + ++L H + +E
Sbjct: 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 8e-50
Identities = 62/309 (20%), Positives = 113/309 (36%), Gaps = 22/309 (7%)
Query: 54 PKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLC 113
SA + + + KP + + T +GRG FG +
Sbjct: 21 SSGSAKLQRLGPETEDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRVGRGSFGEVHRM 77
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173
+ TG A K + + E+ LS IV GA + V++
Sbjct: 78 KDKQTGFQCAVKKV--------RLEVFRVEELVACAGLS-SPRIVPLYGAVREGPWVNIF 128
Query: 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233
MEL GG L I G E A + + + H ++H D+K +N LLS+
Sbjct: 129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD-- 186
Query: 234 GAMLKATDFGLSVFIDEGKVYR------DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVIL 286
G+ DFG ++ + + + I G+ ++APEV+ ++D+WS+ ++
Sbjct: 187 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 246
Query: 287 YILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSA 346
+L+G P+ + I P + +++ L ++P R ++
Sbjct: 247 LHMLNGCHPWTQYFRGPLCLKIASEPPPIREIP-PSCAPLTAQAIQEGLRKEPVHRASAM 305
Query: 347 EVLEHPWMR 355
E+
Sbjct: 306 ELRRKVGKA 314
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-49
Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 7/153 (4%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+ E EI+ K F +D + G I ++L+ A +G + E M +
Sbjct: 15 VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK---EA 71
Query: 450 NGTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DE 506
+G I++ F++ D + + AF+ D D G I + LE + G
Sbjct: 72 SGPINFTVFLTM-FGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTP 130
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539
IK + + D G ++Y+ C ++ G
Sbjct: 131 EEIKNMWAAFPPDVAGNVDYKNICYVITHGEDA 163
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 3e-15
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
K + A E+ I F +D D G+I L+ L G + + E+K + A
Sbjct: 84 FGEK-LKGADPEDVIM---GAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 139
Query: 445 ADVDGNGTIDYIEFISATMHRYRLERD 471
D G +DY H E +
Sbjct: 140 FPPDVAGNVDYKNICYVITHGEDAEGE 166
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 2e-49
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 15/290 (5%)
Query: 74 STRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV 133
+T V K + + + F L LG+G FG L T YA K + K ++
Sbjct: 1 TTNTVSKFDNNGNRDRMKLTDFNFL-MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI 59
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYT 193
D E E +++ + + ++ ++ VME +GG+L I G +
Sbjct: 60 QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK 119
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGK 252
E A I + G+++RDLK +N +L + +G + DFG+ I +G
Sbjct: 120 EPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML-DSEGHIKI--ADFGMCKENIWDGV 176
Query: 253 VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
+ G+ Y+APE++ YGK +D W+ GV+LY +L+G PF E E +F +I++
Sbjct: 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 236
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS-----AEVLEHPWMRE 356
V + + S A + + ++ + P KR+ ++ EH + R
Sbjct: 237 NVAY--PKSM--SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-49
Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 13/275 (4%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMR 72
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 73 ENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEV 268
H V+HRD+K +N LL DG K TDFG I + R +VG+ Y++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILLGM-DGSV--KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLISDS 326
+ R YG ++D+WS G++ ++ G PP+ E + ++ I G P L S
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKL-SAI 245
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361
+D + + L D +KR ++ E+L+H +++ S
Sbjct: 246 FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 168 bits (426), Expect = 3e-49
Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 20/175 (11%)
Query: 380 NKLKKMALKVIAEALSEEEIKGLKTMFAN-MDTDKSGTITYEELKTGLARLGSKLSETEV 438
+ + A+ + L+ + ++ SGT+ E K ++ + V
Sbjct: 3 QQFSWEEAEEN-GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYV 61
Query: 439 KQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAM 498
+ + A D +G+ TID++E+++A R + L F+ +DKD +G I R EL +
Sbjct: 62 EAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIV 121
Query: 499 K------------------DYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ + E + I VD + DG+++ EF R
Sbjct: 122 ESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 3e-49
Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 15/329 (4%)
Query: 35 QTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQ 94
+ Y + + + + + Q + + K + + +
Sbjct: 283 EGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTD 342
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F L LG+G FG L T YA K + K ++ D E E +++
Sbjct: 343 FNFL-MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+ + ++ ++ VME +GG+L I G + E A I +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRR-S 272
G+++RDLK +N +L + +G +K DFG+ I +G + G+ Y+APE++
Sbjct: 462 GIIYRDLKLDNVML-DSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP 518
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
YGK +D W+ GV+LY +L+G PF E E +F +I++ V + +S A + +
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICK 574
Query: 333 KMLIQDPKKRITS-----AEVLEHPWMRE 356
++ + P KR+ ++ EH + R
Sbjct: 575 GLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 4e-49
Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 21/298 (7%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P +SS LG +++ + + LG+G FG L TG+ YA K
Sbjct: 2 PKESSKEGNGIGVNSSNRLG--IDN----FEFIRVLGKGSFGKVMLARVKETGDLYAVKV 55
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
+ K ++ D E E +I+ + + ++ + VME +GG+L I
Sbjct: 56 LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI 115
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS- 245
+ E A I++ + H G+++RDLK +N LL + +G L DFG+
Sbjct: 116 QKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL-DHEGHCKL--ADFGMCK 172
Query: 246 VFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGI 304
I G G+ Y+APE+L+ YG +D W+ GV+LY +L G PF AE E +
Sbjct: 173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS------AEVLEHPWMRE 356
F+AIL V + + + + A +++ + ++P R+ S +L HP+ +E
Sbjct: 233 FEAILNDEVVYPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 9e-49
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 29/312 (9%)
Query: 52 QPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
QP + P P S + P P F+ L K +G+G FG
Sbjct: 4 QPQEPELMNANPAPPPAPSQQINLGPSSNPHA-------KPSDFHFL-KVIGKGSFGKVL 55
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
L + YA K + K+ ++ K++ + I E ++ +V +++ ++
Sbjct: 56 LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAA----AALCRAIVNVVHHCHFMGVMHRDLKPENFL 227
V++ +GGELF + + + E A A + A+ + H + +++RDLKPEN L
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASAL----GYLHSLNIVYRDLKPENIL 171
Query: 228 LSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVI 285
L + G +L TDFGL I+ G+ Y+APEVL + Y + +D W G +
Sbjct: 172 L-DSQGHIVL--TDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAV 228
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LY +L G+PPF++ ++D IL + + I++SA+ L+ +L +D KR+ +
Sbjct: 229 LYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQKDRTKRLGA 284
Query: 346 ----AEVLEHPW 353
E+ H +
Sbjct: 285 KDDFMEIKSHVF 296
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 1e-48
Identities = 28/155 (18%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
A + L +++I+ +K F+ +D D+ G ++ E++K +LG + E+ ++
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK-- 61
Query: 446 DVDGNGTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG- 502
+ G +++ F+S D E + AF FD+ + + + ++ +++ G
Sbjct: 62 --EAPGPLNFTMFLSI-FSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD 118
Query: 503 -IGDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
+ ++ E + G+ +Y +F M++
Sbjct: 119 NFNKD-EMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 1e-48
Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 24/163 (14%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL----GSKLSETEVKQLMDA------ 444
+ LK F D D +G + + + + G EV+ L +A
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 445 -----ADVDGNGTIDYIEFISATMHRYRLERDEH--------LYKAFQYFDKDNSGYITR 491
A V +G++ +FI T + + + + DK+ G I
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINA 121
Query: 492 DELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
DE + G+ E ++VDT+ +G ++ +E T +R
Sbjct: 122 DEFAAWLTALGMSKAE-AAEAFNQVDTNGNGELSLDELLTAVR 163
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 1e-16
Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 21/144 (14%)
Query: 382 LKKMALKVIA---EALSEEEIKGLK--------TMFANMDTDKSGTITYEELKTGLARLG 430
+K A + + E++ LK + G++T E+ L
Sbjct: 29 FEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLI 88
Query: 431 --------SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482
+++ VK ++ D + +G I+ EF + + + +AF D
Sbjct: 89 FEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW-LTALGMS-KAEAAEAFNQVD 146
Query: 483 KDNSGYITRDELETAMKDYGIGDE 506
+ +G ++ DEL TA++D+ G
Sbjct: 147 TNGNGELSLDELLTAVRDFHFGRL 170
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 1e-13
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 16/83 (19%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKE--------------I 512
+ L K F +D D +G + R + E + G +A E +
Sbjct: 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63
Query: 513 ISEVDTDNDGRINYEEFCTMMRS 535
E +DG + E+F + +
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVTEN 86
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 1e-48
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG +L T +A K++ K ++ D E E +++ +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ ++++ VME +GG+L I + + A I+ + H G+++RDL
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144
Query: 222 KPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDV 279
K +N LL +KDG +K DFG+ + G+ Y+APE+L Y +D
Sbjct: 145 KLDNILL-DKDG--HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS GV+LY +L G PF + E+ +F +I + + AKDL+ K+ +++P
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----LEKEAKDLLVKLFVREP 257
Query: 340 KKRITSA-EVLEHPWMRE 356
+KR+ ++ +HP RE
Sbjct: 258 EKRLGVRGDIRQHPLFRE 275
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 3e-48
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 33/271 (12%)
Query: 100 KELGRGQFGITYLC---TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
K LG+G FG +L + + YA K +LK+ + +DR K E I+ + N
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEV----N 84
Query: 157 ---IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA----AALCRAIVNVVH 209
IV+ A++ ++L+++ GG+LF ++ + +TE+ A L A+
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL----D 140
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEV 268
H H +G+++RDLKPEN LL +++G L TDFGLS ID K G+ Y+APEV
Sbjct: 141 HLHSLGIIYRDLKPENILL-DEEGHIKL--TDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + + D WS GV+++ +L+G PF + K ILK + +S A
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEA 253
Query: 328 KDLVRKMLIQDPKKRITS-----AEVLEHPW 353
+ L+R + ++P R+ + E+ H +
Sbjct: 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 3e-48
Identities = 88/274 (32%), Positives = 141/274 (51%), Gaps = 31/274 (11%)
Query: 100 KELGRGQFGITYLC---TENSTGNSYACKSILKRKLVNKQ-DREDIKREIQIMQHLSGQQ 155
+ LG+G +G + T +TG +A K + K +V D K E I++ +
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK--- 79
Query: 156 N--IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA----AALCRAIVNVVH 209
+ IV+ A++ ++L++E SGGELF ++ +G + E A A + A+
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL----G 135
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEV 268
H H G+++RDLKPEN +L N G L TDFGL I +G V G+ Y+APE+
Sbjct: 136 HLHQKGIIYRDLKPENIML-NHQGHVKL--TDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
L RS + + +D WS G ++Y +L+G PPF E K D ILK ++ ++ A
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPY----LTQEA 248
Query: 328 KDLVRKMLIQDPKKRITS-----AEVLEHPWMRE 356
+DL++K+L ++ R+ + EV HP+ R
Sbjct: 249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 5e-48
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 22/272 (8%)
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIV 158
LG+G +GI Y + S A K I + + + + EI + +HL +NIV
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLK-HKNIV 82
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY-----TEKAAAALCRAIVNVVHHCHF 213
++ G++ + + + ME GG L + + + E+ + I+ + + H
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSA--LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR-- 270
++HRD+K +N L++ G +LK +DFG S + + G+ Y+APE++
Sbjct: 141 NQIVHRDIKGDNVLINTYSG--VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 271 -RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSA 327
R YGK D+WS G + + +G PP + E + A+ K G+ F+ P + +S A
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPP-FYELGEPQ-AAMFKVGM-FKVHPEIPESMSAEA 255
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359
K + K DP KR + ++L +++ +
Sbjct: 256 KAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 6e-48
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A + + L F +DTD SG I+ EL L+ G S ++L+ D + +G
Sbjct: 20 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 453 IDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE 511
I + EF +H + L + + F+ D G + +E+ A+ G E + +
Sbjct: 80 ITFDEFK--DLHHFILS----MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQA 133
Query: 512 IISEVDTDNDGRINYEEFCTMM 533
++ + D G + ++++ +
Sbjct: 134 LMRKFDRQRRGSLGFDDYVELS 155
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-21
Identities = 17/92 (18%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
I ++ F D+ G + E++ L G ++SE + LM D G++ + ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
+ ++ + F ++D++ +G +T
Sbjct: 152 VELSI------FVCRVRNVFAFYDRERTGQVT 177
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-18
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINY 526
+ ++ L + F+ D D SG I+ EL A+ G+ A+ ++++ D ++ G I +
Sbjct: 23 MNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITF 82
Query: 527 EEFCTMMRS 535
+EF +
Sbjct: 83 DEFKDLHHF 91
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 1e-47
Identities = 73/334 (21%), Positives = 141/334 (42%), Gaps = 28/334 (8%)
Query: 40 TYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLG 99
+Y + P + ++ + + + L+D + L
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQD----FDLL 57
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+ +GRG + L T YA + + K + + +D + ++ E + + S +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ + V+E +GG+L + Q E+ A I +++ H G+++R
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 177
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEI 277
DLK +N LL + +G L TD+G+ + G G+ Y+APE+LR YG +
Sbjct: 178 DLKLDNVLL-DSEGHIKL--TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 234
Query: 278 DVWSAGVILYILLSGVPPFW---------AETEKGIFDAILKGGVDFESEPWLLISDSAK 328
D W+ GV+++ +++G PF TE +F IL+ + +S A
Sbjct: 235 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAA 290
Query: 329 DLVRKMLIQDPKKRITS------AEVLEHPWMRE 356
+++ L +DPK+R+ A++ HP+ R
Sbjct: 291 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 1e-47
Identities = 77/264 (29%), Positives = 131/264 (49%), Gaps = 20/264 (7%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG C +TG YACK + K+++ ++ E QI++ ++ + +V
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLA 250
Query: 162 GAYEDRQSVHLVMELCSGGELFDKI--IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
AYE + ++ LV+ L +GG+L I + Q + E A I + H +++R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEID 278
DLKPEN LL + G + +D GL+V + EG+ + VG+ Y+APEV++ Y D
Sbjct: 311 DLKPENILL-DDHGHIRI--SDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 279 VWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
W+ G +LY +++G PF +K + + + ++ S A+ L ++
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER----FSPQARSLCSQL 423
Query: 335 LIQDPKKRITS-----AEVLEHPW 353
L +DP +R+ EV EHP
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPL 447
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-47
Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 22/171 (12%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEEL-----KTGLARLGSKLSETEVKQ 440
K+ ++ + I K MF +D + +G I+ +E+ + LG+ + + +
Sbjct: 2 NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61
Query: 441 LMDAADVDGNGT-----IDYIEFISATMHRYRLERDEH-----------LYKAFQYFDKD 484
A G G D+ +I E +++ F DKD
Sbjct: 62 DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121
Query: 485 NSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+G IT DE + K GI +E D D G+++ +E
Sbjct: 122 QNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 5e-18
Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 1/104 (0%)
Query: 378 AMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
KL L+ A+ +F +D D++G IT +E K G S +
Sbjct: 87 GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED 146
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYF 481
++ D+D +G +D E + D K +
Sbjct: 147 CEETFRVCDIDESGQLDVDEMTRQ-HLGFWYTMDPACEKLYGGA 189
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 1e-47
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 23/160 (14%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEV---------------KQL 441
E + + F D D +G I + + ++ + L
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 442 MDAADVDGNGTIDYIEFISATMHRYRLERDE-------HLYKAFQYFDKDNSGYITRDEL 494
AD DG+ I EF++ + R R + D L+ A D D G +T +
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 495 ETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
A+ +G+ ++ ++ + +DTD DG++ E
Sbjct: 121 ARALTAFGVPEDL-ARQAAAALDTDGDGKVGETEIVPAFA 159
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-15
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 377 RAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS----- 431
+ + A +AL + + D D IT EE TG +
Sbjct: 32 AMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDR 91
Query: 432 --KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
+++ + + AD DG+G + + A + + + ++ +A D D G +
Sbjct: 92 FAEMARPFLHAALGVADTDGDGAVTVADTARA-LTAFGVP-EDLARQAAAALDTDGDGKV 149
Query: 490 TRDELETAMKDY 501
E+ A Y
Sbjct: 150 GETEIVPAFARY 161
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 2e-47
Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 19/266 (7%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN--I 157
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ ++ +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT---RHPFL 67
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V+
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRR-SYGK 275
+RD+K EN +L +KDG + TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 128 YRDIKLENLML-DKDGHIKI--TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 240
Query: 336 IQDPKKRITS-----AEVLEHPWMRE 356
+DPK+R+ EV+EH +
Sbjct: 241 KKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 2e-47
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE-VKQLMDAADVDG 449
E LS E F M SG +T E K S + V+Q+ + D +
Sbjct: 8 VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65
Query: 450 NGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK--------DY 501
+G ID++E+++A + + D+ L F+ +D D +G I R EL +K +
Sbjct: 66 DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125
Query: 502 GIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E + ++D + DG ++ EEF ++
Sbjct: 126 AMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 2e-47
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 23/267 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LGRG FG + C +TG YACK + K++L ++ + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLA 251
Query: 162 GAYEDRQSVHLVMELCSGGELF----DKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A+E + + LVM + +GG++ + + E A IV+ + H H ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLRR-SYGK 275
+RDLKPEN LL + DG + +D GL+V + G+ ++APE+L Y
Sbjct: 312 YRDLKPENVLL-DDDGNVRI--SDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLLISDSAKDLV 331
+D ++ GV LY +++ PF A EK + +L+ V + + S ++KD
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKDFC 424
Query: 332 RKMLIQDPKKRITS-----AEVLEHPW 353
+L +DP+KR+ + HP
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 4e-47
Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 40/337 (11%)
Query: 42 QQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKE 101
+++ + +K + E V I F L K
Sbjct: 9 EEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKV------GIENFELL-KV 61
Query: 102 LGRGQFGITYLC---TENSTGNSYACKSILKRKLVNKQ-DREDIKREIQIMQHLSGQQNI 157
LG G +G +L + + TG YA K + K +V K E + E Q+++H+ +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAA----AALCRAIVNVVHHCHF 213
V A++ +HL+++ +GGELF + + +TE + A+ H H
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL----EHLHK 177
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYRDIVGSAYYVAPEVLRR 271
+G+++RD+K EN LL + +G +L TDFGLS DE + D G+ Y+AP+++R
Sbjct: 178 LGIIYRDIKLENILL-DSNGHVVL--TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 272 S---YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLLIS 324
+ K +D WS GV++Y LL+G PF + EK I ILK + E +S
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE----MS 290
Query: 325 DSAKDLVRKMLIQDPKKRITS-----AEVLEHPWMRE 356
AKDL++++L++DPKKR+ E+ EH + ++
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 159 bits (406), Expect = 5e-47
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
+ +I+ K F +D ++ G I E+L LA +G ++ ++ +M + G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
++ F++ D + + AF FD++ SG+I D L + G DE +
Sbjct: 57 NFTMFLTM-FGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDE-EV 114
Query: 510 KEIISEVDTDNDGRINYEEFCTMMRSGT 537
E+ E D G NY EF +++ G
Sbjct: 115 DEMYREAPIDKKGNFNYVEFTRILKHGA 142
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 5e-15
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
K + E+ I+ F D + SG I + L+ L +G + ++ EV ++
Sbjct: 65 FGEK-LNGTDPEDVIRNAFACF---DEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 445 ADVDGNGTIDYIEFISATMH 464
A +D G +Y+EF H
Sbjct: 121 APIDKKGNFNYVEFTRILKH 140
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 161 bits (408), Expect = 7e-47
Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 17/163 (10%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET---------EVKQ 440
I E+ ++ +KT +D G I+ E+ + R+ + E +
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 441 LMDAADVDGNGTIDYIEFISATMHRYR-------LERDEHLYKAFQYFDKDNSGYITRDE 493
+ D + I E + D D GY++ E
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 494 LETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ ++ G + + +D + +G+I+ +EF +
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND 166
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 4e-16
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 385 MALKVIAEALSEEEIKG--LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLM 442
++ E+ + M+ +DTDK G ++ E K L +G L++ +
Sbjct: 85 ATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCF 144
Query: 443 DAADVDGNGTIDYIEFISATMHRYRL-ERDEHLYKAF 478
+ D + NG I EF+ ++ + + L AF
Sbjct: 145 NTLDFNKNGQISRDEFLVT-VNDFLFGLEETALANAF 180
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 8e-14
Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 12/137 (8%)
Query: 382 LKKMALKVI-----AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK---- 432
+ +A+++ + +EE + + + I+ EE K
Sbjct: 36 YELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGE 95
Query: 433 ---LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
++ + + D D D +G + EF + D+ F D + +G I
Sbjct: 96 EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQI 155
Query: 490 TRDELETAMKDYGIGDE 506
+RDE + D+ G E
Sbjct: 156 SRDEFLVTVNDFLFGLE 172
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 1e-46
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 18/312 (5%)
Query: 74 STRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV 133
+ PVQ + D + +T +++G+G FG + +N T A K I L
Sbjct: 2 AHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLE 58
Query: 134 NKQDR-EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY 192
+D EDI++EI ++ + ++ G+Y + ++ME GG D ++ G
Sbjct: 59 EAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPL 116
Query: 193 TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
E A + R I+ + + H +HRD+K N LLS G L DFG++ + + +
Sbjct: 117 DETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE-HGEVKL--ADFGVAGQLTDTQ 173
Query: 253 VYRD-IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAIL 309
+ R+ VG+ +++APEV+++S Y + D+WS G+ L G PP K +F I
Sbjct: 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIP 232
Query: 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAV 369
K + S K+ V L ++P R T+ E+L+H ++ A + +
Sbjct: 233 KNNPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR--NAKKTSYLTEL 287
Query: 370 LSRMKQFRAMNK 381
+ R K+++A
Sbjct: 288 IDRYKRWKAEQS 299
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 1e-46
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 31/327 (9%)
Query: 71 SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
S S P + + + L D + L + +G G +G Y TG A K +
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-- 58
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH------LVMELCSGGELFD 184
V + E+IK+EI +++ S +NI + GA+ + LVME C G + D
Sbjct: 59 --VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
Query: 185 --KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
K E+ A +CR I+ + H H V+HRD+K +N LL+ ++ L DF
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKL--VDF 173
Query: 243 GLSVFIDEGKVYRD-IVGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPP 295
G+S +D R+ +G+ Y++APEV+ +Y + D+WS G+ + G PP
Sbjct: 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 296 FWAETE--KGIFDAILKGGV-DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
+ + +F I + +S+ W S + + L+++ +R + ++++HP
Sbjct: 234 L-CDMHPMRALF-LIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHP 288
Query: 353 WMREGGEASD-KPIGSAVLSRMKQFRA 378
++R+ + + R K+ R
Sbjct: 289 FIRDQPNERQVRIQLKDHIDRTKKKRG 315
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-46
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 24/274 (8%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+ +GRG + L T YA K + K + + +D + ++ E + + S +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
++ + V+E +GG+L + Q E+ A I +++ H G+++R
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEI 277
DLK +N LL + +G L TD+G+ + G G+ Y+APE+LR YG +
Sbjct: 135 DLKLDNVLL-DSEGHIKL--TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 191
Query: 278 DVWSAGVILYILLSGVPPFW---------AETEKGIFDAILKGGVDFESEPWLLISDSAK 328
D W+ GV+++ +++G PF TE +F IL+ + +S A
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAA 247
Query: 329 DLVRKMLIQDPKKRITS------AEVLEHPWMRE 356
+++ L +DPK+R+ A++ HP+ R
Sbjct: 248 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 6e-46
Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 23/321 (7%)
Query: 43 QQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKEL 102
Q L Q + + + V + +F L K L
Sbjct: 104 QTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRV------TMNEFEYL-KLL 156
Query: 103 GRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG 162
G+G FG L E +TG YA K + K +V K + E +++Q+ S + +
Sbjct: 157 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKY 215
Query: 163 AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMGVMHRDL 221
+++ + VME +GGELF + + ++E A IV+ + + H V++RDL
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL 275
Query: 222 KPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDV 279
K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL + YG+ +D
Sbjct: 276 KLENLML-DKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 332
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W GV++Y ++ G PF+ + + +F+ IL + F + AK L+ +L +DP
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLKKDP 388
Query: 340 KKRITS-----AEVLEHPWMR 355
K+R+ E+++H +
Sbjct: 389 KQRLGGGSEDAKEIMQHRFFA 409
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 9e-46
Identities = 74/328 (22%), Positives = 130/328 (39%), Gaps = 18/328 (5%)
Query: 39 QTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTL 98
Y P Q PM + + ++ P+ +D + ++
Sbjct: 2 SYYHHHHHHD--YDIPTTENLYFQGAMDPMPAGGRA-GSLKDPDVAELFFKDDPEKLFSD 58
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIV 158
+E+G G FG Y + A K + + + +DI +E++ +Q L N +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTI 117
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
++RG Y + LVME C G + + E AA+ + + + H ++H
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL----RRSYG 274
RD+K N LLS G K DFG + + VG+ Y++APEV+ Y
Sbjct: 178 RDVKAGNILLSE-PGLV--KLGDFGSASIMAPAN---SFVGTPYWMAPEVILAMDEGQYD 231
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
++DVWS G+ L PP + ++ +S W S+ ++ V
Sbjct: 232 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDS 288
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEAS 361
L + P+ R TS +L+H ++ +
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFVLRERPPT 316
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 2e-45
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRD 492
L + +V + A + + EF + + + + KAF D+D SG+I D
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEED 61
Query: 493 ELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
EL+ ++++ +A K +++ D D DG I +EF M+++
Sbjct: 62 ELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 108
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-15
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL---G 430
K+F A L S ++ +K F +D DKSG I +ELK L
Sbjct: 27 KEFFAKVGLASK---------SLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 74
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFI 459
L++ E K + D DG+G I EF
Sbjct: 75 RALTDAETKAFLADGDKDGDGMIGVDEFA 103
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 2e-45
Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGL 402
+ VL + + G + + +V ++ ++ + + L +++E++ L
Sbjct: 11 VLIVIVLFVKLLEQFG-LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQIL 69
Query: 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLSETE-VKQLMDAADVDGNGTIDYIEFISA 461
F + SG + E K ++ + T L +A D D NG + + +FI
Sbjct: 70 YRGF--KNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKG 127
Query: 462 TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK---------DYGIGDEASIKE- 511
R E L AF +D + GYIT++E+ MK Y + E + ++
Sbjct: 128 LSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQH 187
Query: 512 ---IISEVDTDNDGRINYEEFCTMMR 534
++D + DG + +EF +
Sbjct: 188 VETFFQKMDKNKDGVVTIDEFIESCQ 213
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 8e-04
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 366 GSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGL-KTMFANMDTDKSGTITYEELKT 424
+++ + M + M K L E+ + +T F MD +K G +T +E
Sbjct: 151 KDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIE 210
Query: 425 GLAR 428
+
Sbjct: 211 SCQK 214
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 5e-45
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 66 QPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACK 125
K + T Q+ + + D+ E+G G G + TG+ A K
Sbjct: 5 SSGKQTGYLTIGGQRYQA----EINDLENL----GEMGSGTCGQVWKMRFRKTGHVIAVK 56
Query: 126 SILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDK 185
+ R+ NK++ + I ++ ++ IV+ G + V + MEL K
Sbjct: 57 QM--RRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLK 114
Query: 186 IIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244
QG E+ + AIV +++ GV+HRD+KP N LL ++ G K DFG+
Sbjct: 115 KRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL-DERGQI--KLCDFGI 171
Query: 245 SVFIDEGKVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWA 298
S + + K G A Y+APE + Y DVWS G+ L L +G P+
Sbjct: 172 SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY-- 229
Query: 299 ETEKGIFDAI----------LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEV 348
+ K F+ + L G + F S + V+ L +D +KR ++
Sbjct: 230 KNCKTDFEVLTKVLQEEPPLLPGHMGF--------SGDFQSFVKDCLTKDHRKRPKYNKL 281
Query: 349 LEHPWMRE 356
LEH +++
Sbjct: 282 LEHSFIKR 289
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 7e-45
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 22/283 (7%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
D + + + ELG G FG Y TG A K I + ++++ ED EI+I+
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILA 71
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVV 208
IV+ GAY + +++E C GG + + TE +CR ++ +
Sbjct: 72 TCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+ H ++HRDLK N L++ +G + DFG+S + RD +G+ Y++APE
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTL-EGDI--RLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 268 VLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGG--VDFESE 318
V+ Y + D+WS G+ L + PP + + I K
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-KIAKSDPPTLLTPS 246
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361
W S +D ++ L ++P+ R ++A++LEHP++
Sbjct: 247 KW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNK 286
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 1e-44
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
+ L ++ + + GT DY F + + D + + F+ DKD SG+
Sbjct: 2 MTKVLKADDINKAIS--AFKDPGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGF 57
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
I +EL+ +K + ++ K +++ D+D+DG+I +EF M+
Sbjct: 58 IEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-14
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 382 LKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELK---TGLARLGSKLSETEV 438
+ LK ++ + +K +F +D D+SG I EELK G + G L++TE
Sbjct: 30 FHLVGLK----GKTDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTET 82
Query: 439 KQLMDAADVDGNGTIDYIEFI 459
K L+ A D D +G I EF
Sbjct: 83 KALLAAGDSDHDGKIGADEFA 103
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 2e-44
Identities = 77/278 (27%), Positives = 141/278 (50%), Gaps = 19/278 (6%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ + + + ++LG G +G Y TG A K + + + D ++I +EI IMQ
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV---PV--ESDLQEIIKEISIMQ 79
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVV 208
++V++ G+Y + +VME C G + D I + TE A + ++ + +
Sbjct: 80 QCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGL 138
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+ HFM +HRD+K N LL+ +G A K DFG++ + + R+ ++G+ +++APE
Sbjct: 139 EYLHFMRKIHRDIKAGNILLNT-EGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPE 195
Query: 268 VLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGG--VDFESEPWLLI 323
V++ Y D+WS G+ + G PP+ + IF I + E W
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTNPPPTFRKPELW--- 251
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361
SD+ D V++ L++ P++R T+ ++L+HP++R S
Sbjct: 252 SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-44
Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 24/164 (14%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET------EVKQLMDAADV 447
S ++ + D D SG + +EL+ + L + E+K +D
Sbjct: 10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 448 DGNGTIDYIEFIS---------ATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAM 498
+G I +E +L+ E K ++ +D D+SG+I +EL+ +
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129
Query: 499 KDYGIGDEAS---------IKEIISEVDTDNDGRINYEEFCTMM 533
KD + ++ D++NDG++ E ++
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 1e-38
Identities = 45/228 (19%), Positives = 84/228 (36%), Gaps = 33/228 (14%)
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAM--NKLKKMALKVI 390
+ L+Q KK ++ + G+ D I + + + + + L
Sbjct: 43 QELLQARKKAGLELSPEMKTFVDQYGQRDDGKI------GIVELAHVLPTEENFLLLFRC 96
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET--------EVKQLM 442
+ S EE + DTD SG I EELK L L K ++T ++
Sbjct: 97 QQLKSCEE---FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLML 153
Query: 443 DAADVDGNGTIDYIEFI--------SATMHRYRLERDEHLYKAFQYFDKDNSGYITRDEL 494
D + +G ++ E + + KAF+ +D+D +GYI +EL
Sbjct: 154 KLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 213
Query: 495 ETAMKDYG--IGDEASIKEII----SEVDTDNDGRINYEEFCTMMRSG 536
+ +KD E I I + + + G++ + ++ +G
Sbjct: 214 DALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 3e-44
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDY 455
+ L +F +D D+SG I+ EL+ L+ + + V+ ++ D + +++
Sbjct: 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 456 IEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIIS 514
EF + F+ +D+DNSG I ++EL+ A+ +G + +I
Sbjct: 64 SEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 117
Query: 515 EVDTDNDGRINYEEFCTMM 533
+ D G+I +++F
Sbjct: 118 KFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 2e-23
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
I + +F D D SG I ELK L+ G +LS+ L+ D G G I + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
I + + L F+ +D D G+I +
Sbjct: 133 IQGCI------VLQRLTDIFRRYDTDQDGWIQVSYEQ 163
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 6e-18
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRIN 525
L L+ FQ DKD SG I+ EL+ A+ + + +++ IIS D +N +N
Sbjct: 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 526 YEEFCTMMR 534
+ EF + +
Sbjct: 63 FSEFTGVWK 71
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 4e-44
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
L++ +V + A + + +Y F + + D + KAF D+D SG+
Sbjct: 3 FSGILADADVAAALKA--CEAADSFNYKAFFAKVGLTAKSADD--IKKAFFVIDQDKSGF 58
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
I DEL+ ++ + G +A K + D+D DG I +E+ ++++
Sbjct: 59 IEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVKA 109
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 6e-15
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL---GSKLSETEVKQLMDAADVDG 449
L+ + +K F +D DKSG I +ELK L L++ E K + A D DG
Sbjct: 35 GLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDG 94
Query: 450 NGTIDYIEFI 459
+G I E+
Sbjct: 95 DGAIGVDEWA 104
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 9e-44
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
L ++K+ +DA V G+ ++ +F A + + ++ + K F+ D D SG+
Sbjct: 3 AKDLLKADDIKKALDA--VKAEGSFNHKKFF-ALVGLKAMSAND-VKKVFKAIDADASGF 58
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
I +EL+ +K + +A K + D D DG+I +EF T++
Sbjct: 59 IEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 1e-18
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 360 ASDKPIGSAVLSRMKQFRAMNK------LKKMALKVIAEALSEEEIKGLKTMFANMDTDK 413
A D + + +A + LK A+S + +K +F +D D
Sbjct: 3 AKDLLKADDIKKALDAVKAEGSFNHKKFFALVGLK----AMSAND---VKKVFKAIDADA 55
Query: 414 SGTITYEELKTGLARL---GSKLSETEVKQLMDAADVDGNGTIDYIEFI 459
SG I EELK L G L++ E K + AAD DG+G I EF
Sbjct: 56 SGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 104
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 1e-43
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 27/272 (9%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
ELGRG +G+ +G A K I R VN Q+++ + ++ I V
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVT 70
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIA-----QGHYTEKAAAALCRAIVNVVHHCHF- 213
F GA V + MEL DK E + +IV + H H
Sbjct: 71 FYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR--- 270
+ V+HRD+KP N L+ N G K DFG+S ++ + G Y+APE +
Sbjct: 129 LSVIHRDVKPSNVLI-NALGQV--KMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD---AILKGGV-DFESEPWLLIS 324
+ Y + D+WS G+ + L P+ ++ F +++ ++ + S
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF---S 240
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
D + L ++ K+R T E+++HP+
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 2e-43
Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 32/305 (10%)
Query: 68 MKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI 127
++SS ++ + L+D+ E+GRG +G +G A K I
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDL-------GEIGRGAYGSVNKMVHKPSGQIMAVKRI 55
Query: 128 LKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII 187
R V++++++ + ++ ++ S IV+F GA + MEL S FDK
Sbjct: 56 --RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTS--FDKFY 111
Query: 188 ------AQGHYTEKAAAALCRAIVNVVHHCHFMG-VMHRDLKPENFLLSNKDGGAMLKAT 240
E+ + A V ++H ++HRD+KP N LL ++ G K
Sbjct: 112 KYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL-DRSGNI--KLC 168
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVL-----RRSYGKEIDVWSAGVILYILLSGVPP 295
DFG+S + + G Y+APE + R+ Y DVWS G+ LY L +G P
Sbjct: 169 DFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
Query: 296 FWAETEKGIFDA---ILKGGV-DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ +FD ++KG + S S + V L +D KR E+L+H
Sbjct: 229 Y--PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286
Query: 352 PWMRE 356
P++
Sbjct: 287 PFILM 291
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 9e-43
Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 22/236 (9%)
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE---HPWMREGGEASDKPIGSAVLSR 372
S+ LL L ++ I+ + R T ++ W+ + L
Sbjct: 10 ASDGNLLGDPGRIPLSKRESIKWQRPRFTRQALMRCCLIKWILSSAAPQGSDSSDSELEL 69
Query: 373 MKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK 432
L ++ + +++E++ L F + +G + + K ++ +
Sbjct: 70 STVRHQPEGLDQLQAQ---TKFTKKELQSLYRGF--KNECPTGLVDEDTFKLIYSQFFPQ 124
Query: 433 LSETE-VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITR 491
T L +A D DGNG I + +F+ R E L AF +D + G IT+
Sbjct: 125 GDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITK 184
Query: 492 DELETAMK---------DYGIGDEASIKE----IISEVDTDNDGRINYEEFCTMMR 534
+E+ MK Y I E + E ++D + DG + +EF +
Sbjct: 185 EEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 1e-42
Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 30/172 (17%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE----------VKQLM 442
A + + G ++ + D D +G I +EL + KL + K M
Sbjct: 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFM 63
Query: 443 DAADVDGNGTIDYIEF-----------ISATMHRYRLERDEHLYKAFQYFDKDNSGYITR 491
A D +G + E + L+ K ++ +D D+SGYI+
Sbjct: 64 SAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISA 123
Query: 492 DELETAMKDYGIGDEASI---------KEIISEVDTDNDGRINYEEFCTMMR 534
EL+ +KD + + I ++ D + DGR++ + ++
Sbjct: 124 AELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILA 175
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 2e-32
Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 29/186 (15%)
Query: 377 RAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET 436
+ ++ L + + ++ D D SG I+ ELK L L + +
Sbjct: 81 NMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKK 140
Query: 437 --------EVKQLMDAADVDGNGTIDYIEFIS------------ATMHRYRLERDEHLYK 476
+M D + +G +D + ++ER K
Sbjct: 141 IPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEK 200
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIGDEASI---------KEIISEVDTDNDGRINYE 527
F ++D +G + E++ +KD SI + +++ D + DG+I
Sbjct: 201 IFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260
Query: 528 EFCTMM 533
E +
Sbjct: 261 ELALCL 266
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 68.6 bits (167), Expect = 5e-13
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 11/75 (14%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEAS-----------IKEIISEVDTDN 520
+ +Q+FD D++GYI EL+ + + K +S D
Sbjct: 11 AGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATF 70
Query: 521 DGRINYEEFCTMMRS 535
DGR+ EE M+
Sbjct: 71 DGRLQIEELANMILP 85
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 4e-10
Identities = 20/143 (13%), Positives = 40/143 (27%), Gaps = 23/143 (16%)
Query: 377 RAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEE------------LKT 424
+ L K I +E M D +K G + + L+
Sbjct: 128 NFLKDLFLQHKKKIPPNKLDEYTD---AMMKIFDKNKDGRLDLNDLARILALQENFLLQF 184
Query: 425 GLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL--------ERDEHLYK 476
+ + + +++ DV G ++ E L + D+
Sbjct: 185 KMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFREC 244
Query: 477 AFQYFDKDNSGYITRDELETAMK 499
+ D + G I + EL +
Sbjct: 245 LLTHCDMNKDGKIQKSELALCLG 267
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-42
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSG 487
+ LS +++ + + + +Y F S + + + K F D+D SG
Sbjct: 2 AITDILSAKDIESALSS--CQAADSFNYKSFFSTVGLSS--KTPDQIKKVFGILDQDKSG 57
Query: 488 YITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+I +EL+ +K++ A K ++ DTD DG+I EEF +++++
Sbjct: 58 FIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-15
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK---LSETEVKQLMDAADVDG 449
LS + +K +F +D DKSG I EEL+ L S L+ E K + A D DG
Sbjct: 35 GLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDG 94
Query: 450 NGTIDYIEFIS 460
+G I EF S
Sbjct: 95 DGKIGVEEFQS 105
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 4e-42
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 28/183 (15%)
Query: 377 RAMNKLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS 434
RA L+ L+ I + S +I L + F ++D ++GT++ E+ + + L
Sbjct: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
Query: 435 ETEVKQLMDAADVDGNGTIDYIEFISATMH----------------RYRLERDEHLYKAF 478
+ ++++A +G +++ F+ H R L+ AF
Sbjct: 64 D----RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 479 QYFDKDNSGYITRDELETAMKDY---GIGDE---ASIKEIISEVDTDNDGRINYEEFCTM 532
+ +D D I+RDEL ++ I DE + I E D D D I++ EF +
Sbjct: 120 RLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
Query: 533 MRS 535
+
Sbjct: 180 LEK 182
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 7e-04
Identities = 11/86 (12%), Positives = 34/86 (39%), Gaps = 17/86 (19%)
Query: 382 LKKMALKVIAEALSEEEIKGL-KTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQ 440
L ++ ++ +S+E++ + D D I++ E +
Sbjct: 135 LLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTE----------------FVK 178
Query: 441 LMDAADVDGNGTIDYIEFISATMHRY 466
+++ DV+ +I ++ ++A + +
Sbjct: 179 VLEKVDVEQKMSIRFLHKLAAALEHH 204
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-42
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 30/283 (10%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR-EDIKREIQIMQHLSGQ 154
Y L + +G G + A K I L Q +++ +EIQ M
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI---NLEKCQTSMDELLKEIQAMSQCH-H 72
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFD--------KIIAQGHYTEKAAAALCRAIVN 206
NIV + ++ + + LVM+L SGG + D G E A + R ++
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD------IVGS 260
+ + H G +HRD+K N LL DG + DFG+S F+ G VG+
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLGE-DGSV--QIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 261 AYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------G 312
++APEV+ + Y + D+WS G+ L +G P+ + L+
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ E S + ++ L +DP+KR T+AE+L H + +
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 6e-42
Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 71/317 (22%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHL 151
Y ++G G +G+ + C TG A K K + +D IK REI++++ L
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIK-----KFLESEDDPVIKKIALREIRMLKQL 59
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELC---------SGGELFD-----KIIAQGHYTEKAA 197
N+V + ++ +HLV E C I Q
Sbjct: 60 K-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ-------- 110
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRD 256
+A+ + CH +HRD+KPEN +L K ++K DFG + + Y D
Sbjct: 111 --TLQAV----NFCHKHNCIHRDVKPEN-ILITKHS--VIKLCDFGFARLLTGPSDYYDD 161
Query: 257 IVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAI-- 308
V + +Y +PE+L YG +DVW+ G + LLSGVP + +++ I +
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGD 221
Query: 309 -----------LKGGVDFESEPWL----------LISDSAKDLVRKMLIQDPKKRITSAE 347
+ + IS A L++ L DP +R+T +
Sbjct: 222 LIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQ 281
Query: 348 VLEHPWMREGGEASDKP 364
+L HP+ E D
Sbjct: 282 LLHHPYFENIREIEDLA 298
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 9e-42
Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
S+ + L F +D +K G ++ +L+ +G+ +++++ DG+ +
Sbjct: 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQQ----IGALAVNPLGDRIIESFFPDGSQRV 78
Query: 454 DYIEFISATMHRYRLE-----------------RDEHLYKAFQYFDKDNSGYITRDELET 496
D+ F+ H +E R L+ AFQ +D D G I+R E+
Sbjct: 79 DFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQ 138
Query: 497 AMKDYG---IGDE---ASIKEIISEVDTDNDGRINYEEFCTMMRSG 536
++ + +E + E D D DG +++ EF +
Sbjct: 139 VLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 5e-11
Identities = 20/126 (15%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 368 AVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLA 427
VL+ + + + K ++ ++ D D+ G I+ E+ L
Sbjct: 85 RVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLY---DLDRDGKISRHEMLQVLR 141
Query: 428 RL-GSKLSETEVKQLMDA----ADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482
+ G +++E +++ + D AD DG+G + ++EF + + + +E+ + +
Sbjct: 142 LMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKS-LEKMDVEQKMSI----RILK 196
Query: 483 KDNSGY 488
+ +
Sbjct: 197 HHHHHH 202
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 4e-05
Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 22/128 (17%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA-----------------DV 447
+ + D S + + LA E Q D+
Sbjct: 66 IIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDL 125
Query: 448 DGNGTIDYIEF--ISATMHRYRL---ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
D +G I E + M ++ + + + Q D+D G ++ E +++
Sbjct: 126 DRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD 185
Query: 503 IGDEASIK 510
+ + SI+
Sbjct: 186 VEQKMSIR 193
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 4e-41
Identities = 86/357 (24%), Positives = 134/357 (37%), Gaps = 58/357 (16%)
Query: 50 HVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGI 109
+ K + ++ T P YT K +G G FG+
Sbjct: 10 FAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGV 69
Query: 110 TYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR------GA 163
Y +G A K +L QD+ RE+QIM+ L NIV R G
Sbjct: 70 VYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HCNIVRLRYFFYSSGE 121
Query: 164 YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA---------LCRAIVNVVHHCHFM 214
+D ++LV++ E ++ ++ L R++ + H
Sbjct: 122 KKDEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL----AYIHSF 175
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-- 272
G+ HRD+KP+N LL + D +LK DFG + + G+ + S YY APE++ +
Sbjct: 176 GICHRDIKPQN-LLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 233
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-----------------GGVDF 315
Y IDVWSAG +L LL G P F ++ I+K F
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 293
Query: 316 ---ESEPWLLI-----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
++ PW + A L ++L P R+T E H + E + + K
Sbjct: 294 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL 350
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 4e-41
Identities = 85/351 (24%), Positives = 133/351 (37%), Gaps = 83/351 (23%)
Query: 60 QPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTG 119
T Q E ++ LG +G G +G+ C TG
Sbjct: 3 HHHHHHSSGVDLGTENLYFQSME-----------KYENLGL-VGEGSYGMVMKCRNKDTG 50
Query: 120 NSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
A K K + D + +K REI++++ L +N+V + ++ +LV E
Sbjct: 51 RIVAIK-----KFLESDDDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYLVFE 104
Query: 176 LC---------SGGELFD-----KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
D K + Q + I CH ++HRD+
Sbjct: 105 FVDHTILDDLELFPNGLDYQVVQKYLFQ----------IINGI----GFCHSHNIIHRDI 150
Query: 222 KPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEID 278
KPEN +L ++ G ++K DFG + G+VY D V + +Y APE+L YGK +D
Sbjct: 151 KPEN-ILVSQSG--VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVD 207
Query: 279 VWSAGVILYILLSGVPPFWAETE----KGIF-------DAILKG--------GVDF---- 315
VW+ G ++ + G P F +++ I + GV
Sbjct: 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 316 ESEPWLL----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362
E EP +S+ DL +K L DP KR AE+L H + + G A
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER 318
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 5e-41
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 377 RAMNKLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS 434
++ +KL + L+ + + ++E++ F SG + E + +
Sbjct: 3 KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGF--FKDCPSGHLNKSEFQKIYKQFFPFGD 60
Query: 435 ETE-VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
+ + + + D D NG ID+ EFI A R E ++ L AFQ +D DN+G I+ DE
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120
Query: 494 LETAMK-------------DYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ + + E + +I + +D + DG++ EEFC +
Sbjct: 121 MLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 7e-41
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 380 NKLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
+KL+ ++ + E+ +E EI+ F + SG ++ EE K ++
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 438 -VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELET 496
+ + D +G+GTID+ EFI A R + ++ L AF +D D +GYI++ E+
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 497 AMK---------DYGIGDEASIKE----IISEVDTDNDGRINYEEFCTMMRS 535
++ DE++ ++ I ++DT+ DG+++ EEF +S
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 1e-40
Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 452 TIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
TID+ EF++ M R + D E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 364 TIDFPEFLT-MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 421
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG++NYEEF MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 3e-23
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 8/141 (5%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
+G D T E+K L +++ + D +G I
Sbjct: 241 FKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGI-------DFKEDGNI 293
Query: 454 DYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEI 512
+ T + E+ +AF FDKD G IT EL T M+ G EA ++++
Sbjct: 294 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 353
Query: 513 ISEVDTDNDGRINYEEFCTMM 533
I+EVD D +G I++ EF TMM
Sbjct: 354 INEVDADGNGTIDFPEFLTMM 374
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 7e-13
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
MA K + + SEEEI+ +F D D +G I+ EL+ + LG KL++ EV +++
Sbjct: 374 MARK-MKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 429
Query: 445 ADVDGNGTIDYIEFISATMHR 465
AD+DG+G ++Y EF+ +
Sbjct: 430 ADIDGDGQVNYEEFVQMMTAK 450
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 14/71 (19%)
Query: 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGR 523
++ E + F KD+ Y TR E++ +++ ++
Sbjct: 239 DFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDT-----------LVNRIELKG--- 284
Query: 524 INYEEFCTMMR 534
I+++E ++
Sbjct: 285 IDFKEDGNILG 295
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 1e-40
Identities = 76/334 (22%), Positives = 127/334 (38%), Gaps = 57/334 (17%)
Query: 65 QQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYAC 124
QQ + A T+ + E +D + ELG G G+ + + +G A
Sbjct: 12 QQRKRLEAFLTQKQKVGEL----KDDD----FEKISELGAGNGGVVFKVSHKPSGLVMAR 63
Query: 125 KSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD 184
K I + R I RE+Q++ H IV F GA+ + + ME GG L
Sbjct: 64 KLI--HLEIKPAIRNQIIRELQVL-HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120
Query: 185 KIIAQGHYTEKAAAALCRAIVNVVHHCHFMG-VMHRDLKPENFLLSNKDGGAMLKATDFG 243
+ G E+ + A++ + + +MHRD+KP N L+ N G K DFG
Sbjct: 121 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV-NSRGEI--KLCDFG 177
Query: 244 LSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEK 302
+S + + VG+ Y++PE L+ + Y + D+WS G+ L + G P K
Sbjct: 178 VSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236
Query: 303 GIFDAIL--------------------KGGVDFESEPWLLI------------------- 323
+ +S P + I
Sbjct: 237 ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGV 296
Query: 324 -SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
S +D V K LI++P +R +++ H +++
Sbjct: 297 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 3e-40
Identities = 84/347 (24%), Positives = 136/347 (39%), Gaps = 68/347 (19%)
Query: 50 HVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGI 109
H + A P + S+A S + + Y +LG G +G
Sbjct: 6 HHHMGTLEAQTQGPGSMSV-SAAPSATSIDR---------------YRRITKLGEGTYGE 49
Query: 110 TYLCTENSTGNSYACKSILKRKLVNKQDRED-------IKREIQIMQHLSGQQNIVEFRG 162
Y + T + A K I + + E+ I RE+ +++ L +NI+E +
Sbjct: 50 VYKAIDTVTNETVAIKRI-------RLEHEEEGVPGTAI-REVSLLKELQ-HRNIIELKS 100
Query: 163 AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLK 222
+HL+ E +L + + + + ++N V+ CH +HRDLK
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 223 PENFLLSNKDGGA--MLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEI 277
P+N LLS D +LK DFGL+ F + + + + +Y PE+L R Y +
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSV 219
Query: 278 DVWSAGVILYILLSGVPPFWAETEKG----IFDAILKG--------GV------------ 313
D+WS I +L P F ++E IF+ + G GV
Sbjct: 220 DIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL--GLPDDTTWPGVTALPDWKQSFPK 277
Query: 314 ----DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ L+ D DL+ ML DP KRI++ LEHP+
Sbjct: 278 FRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 3e-40
Identities = 85/344 (24%), Positives = 138/344 (40%), Gaps = 67/344 (19%)
Query: 57 SAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTEN 116
+AP + P+ + + GK E YT K +G G FG+ +
Sbjct: 7 NAPLNGVKLNPLDDPNKVIKVL----ASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLV 62
Query: 117 STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR------GAYEDRQSV 170
+ A K +L QD+ RE+QIM+ + N+V+ + G +D +
Sbjct: 63 ESD-EVAIKKVL-------QDKRFKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFL 113
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAA-----------LCRAIVNVVHHCHFMGVMHR 219
+LV+E E + HY + L R++ + H +G+ HR
Sbjct: 114 NLVLEYV--PETVYRASR--HYAKLKQTMPMLLIKLYMYQLLRSL----AYIHSIGICHR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS--YGKEI 277
D+KP+N LL + G +LK DFG + + G+ + S YY APE++ + Y I
Sbjct: 166 DIKPQN-LLLDPPSG-VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNI 223
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILK-----------------GGVDF---ES 317
D+WS G ++ L+ G P F E+ I+K F
Sbjct: 224 DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRP 283
Query: 318 EPWLLI-----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
P+ + A DL+ ++L P R+T+ E L HP+ E
Sbjct: 284 HPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 4e-40
Identities = 24/171 (14%), Positives = 54/171 (31%), Gaps = 26/171 (15%)
Query: 389 VIAEALSEEEIKGLKTMFANM-DTDKSGTITYEELKTGLARLGS---------------K 432
+ A LS+ + + +F D + G I +++ + + ++ +
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60
Query: 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDEHLYKA--------FQYFDK 483
+ L AD + + + E++ + +E+ E L + F D
Sbjct: 61 TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120
Query: 484 DNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
I + E T YGI ++ + + E F +
Sbjct: 121 SGDNIIDKHEYSTVYMSYGI-PKSDCDAAFDTLSDGGKTMVTREIFARLWT 170
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 2e-17
Identities = 18/128 (14%), Positives = 36/128 (28%), Gaps = 11/128 (8%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE---------VKQL 441
+ D ++ +T EE A + + E + +
Sbjct: 55 HNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFM 114
Query: 442 MDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY 501
D D G+ ID E+ + Y + AF +TR+ +Y
Sbjct: 115 FDVNDTSGDNIIDKHEYSTV-YMSYGIP-KSDCDAAFDTLSDGGKTMVTREIFARLWTEY 172
Query: 502 GIGDEASI 509
+ ++
Sbjct: 173 FVSNDRGA 180
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 6e-14
Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 375 QFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS 434
++ M + + E+L E K + MF DT I E T G +
Sbjct: 85 EWLKMWA-ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IP 141
Query: 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472
+++ D G + F Y + D
Sbjct: 142 KSDCDAAFDTLSDGGKTMVTREIFARL-WTEYFVSNDR 178
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 6e-40
Identities = 76/315 (24%), Positives = 120/315 (38%), Gaps = 60/315 (19%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQ 149
+ ++LG G + Y +TG A K + K D E+ I REI +M+
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-------KLDSEEGTPSTAI-REISLMK 58
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGG-----ELFDKIIAQGHYTEKAAAALCRAI 204
L +NIV + LV E + +
Sbjct: 59 ELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYY 263
+ + CH ++HRDLKP+N LL NK G LK DFGL+ F + V + +Y
Sbjct: 118 LQGLAFCHENKILHRDLKPQN-LLINKRG--QLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI--------- 308
AP+VL R+Y ID+WS G IL +++G P F ++ IFD +
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234
Query: 309 -------------------LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
L+ + ++ L + D + +L +P R+++ + L
Sbjct: 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL--DGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 350 EHPWMREGGEASDKP 364
HPW E +
Sbjct: 293 HHPWFAEYYHHASMG 307
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 1e-39
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 28/261 (10%)
Query: 113 CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172
+ + L + + +I+ M S +N V + +++
Sbjct: 80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQLQPSSPKVYLYI 138
Query: 173 VMELCSGGELFDKIIAQGHYT---EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229
M+LC L D + + + I V H G+MHRDLKP N +
Sbjct: 139 QMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT 198
Query: 230 NKDGGAMLKATDFGLS-------------VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGK 275
D ++K DFGL + + VG+ Y++PE + +Y
Sbjct: 199 MDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSH 255
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
++D++S G+IL+ LL F + E+ I + F +V+ M
Sbjct: 256 KVDIFSLGLILFELLY---SFSTQMERVRIITDVRNL--KFPLLFT-QKYPQEHMMVQDM 309
Query: 335 LIQDPKKRITSAEVLEHPWMR 355
L P +R + +++E+
Sbjct: 310 LSPSPTERPEATDIIENAIFE 330
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + +GRG FG+ + +YA K I R + RE + RE++ + L
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLE-HP 64
Query: 156 NIVEFRGAYEDR 167
IV + A+ +
Sbjct: 65 GIVRYFNAWLET 76
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 2e-38
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
++ F D D G ++ EEL + L LG + E+ + + +
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFK 61
Query: 457 EFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKEIIS 514
+ + E + AF+ DK+ +G I EL + + G + ++E++
Sbjct: 62 TVYRKPIKTPTEQSKE-MLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSS-EVEELMK 119
Query: 515 EVDTDNDGRINYEEFCTMMRSGTP 538
EV DG INYE F M+ +G P
Sbjct: 120 EVSVSGDGAINYESFVDMLVTGYP 143
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 7e-17
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 385 MALKVIAEALSEEEIK-GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMD 443
+ +E+ + D + +GTI EL+ L LG L+ +EV++LM
Sbjct: 64 YRKPIKTPTEQSKEMLDAFR-AL---DKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK 119
Query: 444 AADVDGNGTIDYIEFISATMHRYRL 468
V G+G I+Y F+ + Y L
Sbjct: 120 EVSVSGDGAINYESFVDMLVTGYPL 144
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 2e-38
Identities = 58/403 (14%), Positives = 130/403 (32%), Gaps = 78/403 (19%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQ--FGITYLC 113
M+ + +S P Y L +G+G L
Sbjct: 1 MAHHHHHHMENLYFQGMSSFLP----------EGGC----YELLTVIGKGFEDLMTVNLA 46
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173
TG + + + + + ++ E+ + + + NIV +R + + +V
Sbjct: 47 RYKPTGEYVTVR-RINLEACSNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVV 104
Query: 174 MELCSGGELFD--KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
+ G D E A A + + ++ + + H MG +HR +K + L+S
Sbjct: 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV- 163
Query: 232 DGGAMLKATDFGLSVFIDEGKVYR--------DIVGSAYYVAPEVLRRS---YGKEIDVW 280
DG L + ++ + + V +++PEVL+++ Y + D++
Sbjct: 164 DGKVYL--SGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221
Query: 281 SAGVILYILLSGVPPF------------------------------------WAETEKGI 304
S G+ L +G PF + G+
Sbjct: 222 SVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGL 281
Query: 305 FDAILKGGVDFESEPWLLI------SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
D++ + S V + L ++P R +++ +L H + ++
Sbjct: 282 SDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341
Query: 359 EASDKPIGSAV--LSRMKQFRAMNKLKKMALKVIAEALSEEEI 399
+ + + + ++ + F + + L E E+
Sbjct: 342 RRASEALPELLRPVTPITNFEGSQSQDHSGIFGLVTNLEELEV 384
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-38
Identities = 81/321 (25%), Positives = 126/321 (39%), Gaps = 83/321 (25%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQ 149
Y +LG G + Y T N A K I + + E+ I RE+ +++
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RLEHEEGAPCTAI-REVSLLK 55
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELC---------SGGELFD-----KIIAQGHYTEK 195
L NIV +S+ LV E G + + + Q
Sbjct: 56 DLK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQ------ 108
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVY 254
L R + +CH V+HRDLKP+N LL N+ G LK DFGL+ K Y
Sbjct: 109 ----LLRGL----AYCHRQKVLHRDLKPQN-LLINERG--ELKLADFGLARAKSIPTKTY 157
Query: 255 RDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI 308
+ V + +Y P++L Y +ID+W G I Y + +G P F T + IF +
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 309 LKG--------GV----DFESE--------------PWLLISDSAKDLVRKMLIQDPKKR 342
G G+ +F++ P L DL+ K+L + + R
Sbjct: 218 --GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRL--DSDGADLLTKLLQFEGRNR 273
Query: 343 ITSAEVLEHPWMREGGEASDK 363
I++ + ++HP+ GE K
Sbjct: 274 ISAEDAMKHPFFLSLGERIHK 294
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-38
Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 69/308 (22%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQ 149
Y LG GQF Y + +T A K I KL ++ + +D + REI+++Q
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTAL-REIKLLQ 67
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELC---------SGGELFD-----KIIAQGHYTEK 195
LS NI+ A+ + ++ LV + + +
Sbjct: 68 ELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM------ 120
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVY 254
+ + + H ++HRDLKP N LL +++G +LK DFGL+ F + Y
Sbjct: 121 ----TLQG----LEYLHQHWILHRDLKPNNLLL-DENG--VLKLADFGLAKSFGSPNRAY 169
Query: 255 RDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAI 308
V + +Y APE+L R YG +D+W+ G IL LL VP +++ IF+ +
Sbjct: 170 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 229
Query: 309 -------------LKGGVDFESEPWL-------LISDSAKDLVRKMLIQDPKKRITSAEV 348
L V F+S P + D DL++ + + +P RIT+ +
Sbjct: 230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
Query: 349 LEHPWMRE 356
L+ +
Sbjct: 290 LKMKYFSN 297
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 4e-38
Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 60/302 (19%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-------IKREIQIM 148
Y +++G G +G+ Y N+ G ++A K I + ++ED I REI I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ-NNYGETFALKKI-------RLEKEDEGIPSTTI-REISIL 54
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSG--GELFDKIIAQGHYTEKAAAALCRAIVN 206
+ L NIV+ ++ + LV E +L D +G A + ++N
Sbjct: 55 KELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLN 111
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVA 265
+ +CH V+HRDLKP+N LL N++G LK DFGL+ F + Y + + +Y A
Sbjct: 112 GIAYCHDRRVLHRDLKPQN-LLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKG-------- 311
P+VL + Y ID+WS G I +++G P F +E IF + G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL--GTPNSKNWP 226
Query: 312 GV----DFESE-------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
V ++ L +S DL+ KML DP +RIT+ + LEH +
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGL--DESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 355 RE 356
+E
Sbjct: 285 KE 286
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 4e-38
Identities = 27/145 (18%), Positives = 57/145 (39%), Gaps = 15/145 (10%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK--------LSETEVKQLMDAADVD 448
EE++ + +FA + D ++ EL L ++ ++ + ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 449 GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEAS 508
G + + EF + + ++ FD D SG I EL A + G
Sbjct: 60 TTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 509 IKEIISEVDTDNDGRINYEEFCTMM 533
+ +I +D G ++++ F + +
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 1e-24
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
IK + ++ D D+SGTI EL G L+E + ++ D G +D+
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSMIIRRYSDEGGNMDFD 132
Query: 457 EFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT---RDELETAM 498
FIS + R + +++AF+ DKD +G I ++ L+ M
Sbjct: 133 NFISCLV------RLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 171
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-10
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 10/75 (13%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD---------EASIKEIISEVDTD 519
E + F D+ ++ EL + + + +++ +D+D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 520 NDGRINYEEFCTMMR 534
G++ +EEF +
Sbjct: 60 TTGKLGFEEFKYLWN 74
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 1e-37
Identities = 25/144 (17%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
EE++ + G I+ + +LG S + K++ + +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKE----LYGDNL 64
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
Y +++ + ++D E L K F +FD + +GY+T+ +++ + +G + D+
Sbjct: 65 TYEQYLEY-LSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE-A 122
Query: 510 KEIISEVDTDNDGRINYEEFCTMM 533
+ ++ ++ I+Y+ FC +
Sbjct: 123 IDALNAF--SSEDNIDYKLFCEDI 144
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 1e-12
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+ EE+ MFA+ D + +G +T ++K L G L++ E ++A + N ID
Sbjct: 82 NVEELI---KMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDN--ID 136
Query: 455 YIEFISATMH 464
Y F +
Sbjct: 137 YKLFCEDILQ 146
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 3e-37
Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 56/301 (18%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-------IKREIQIM 148
Y +++G G +G + T A K + + D +D + REI ++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSAL-REICLL 55
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSG--GELFDKIIAQGHYTEKAAAALCRAIVN 206
+ L +NIV + + LV E C + FD G + + ++
Sbjct: 56 KELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLK 112
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVA 265
+ CH V+HRDLKP+N LL N++G LK +FGL+ F + Y V + +Y
Sbjct: 113 GLGFCHSRNVLHRDLKPQN-LLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG----IFDAILKG------- 311
P+VL + Y ID+WSAG I L + G P F IF + G
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL--GTPTEEQW 227
Query: 312 -GV----DFESEP-----------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ D++ P ++ + +DL++ +L +P +RI++ E L+HP+
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 356 E 356
+
Sbjct: 288 D 288
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 7e-37
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 394 LSEEEIKGLKTMFANMD--TDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
LS++EI LK +F D + G + +L LG +V + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61
Query: 452 TIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
++ + EF+ A E+ +AF+ FD++ G+I+ EL + G + DE
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE- 120
Query: 508 SIKEIISEVD--TDNDGRINYEEFCTMMRSGT 537
+ EII D D +G + YE+F + +G
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 3e-14
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 385 MALKVIAEALSEEEI-KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMD 443
+ E + + + K F D + G I+ EL+ L LG +LS+ +V +++
Sbjct: 72 YEGLMDCEQGTFADYMEAFK-TF---DREGQGFISGAELRHVLTALGERLSDEDVDEIIK 127
Query: 444 AADV--DGNGTIDYIEFI 459
D+ D G + Y +F+
Sbjct: 128 LTDLQEDLEGNVKYEDFV 145
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 7e-37
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 61/303 (20%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-------IKREIQIM 148
Y +++G G +G+ Y +S G A K I + D ED I REI ++
Sbjct: 23 YQKLEKVGEGTYGVVYKAK-DSQGRIVALKRI-------RLDAEDEGIPSTAI-REISLL 73
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSG--GELFDKIIAQGHYTEKAAAALCRAIVN 206
+ L NIV + + LV E ++ D+ + + ++
Sbjct: 74 KELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLR 130
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVA 265
V HCH ++HRDLKP+N LL N DG LK DFGL+ F + Y V + +Y A
Sbjct: 131 GVAHCHQHRILHRDLKPQN-LLINSDG--ALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKG-------- 311
P+VL + Y +D+WS G I +++G P F T+ IF + G
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL--GTPNPREWP 245
Query: 312 GV----DFESE--------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
V ++ P DL+ ML DP KRI++ + + HP+
Sbjct: 246 QVQELPLWKQRTFQVFEKKPWSSIIPGF--CQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 354 MRE 356
++
Sbjct: 304 FKD 306
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 8e-37
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA-ADVDGNGTIDYI 456
+ K +F D G I + L L +G + V+ +++A + + ++
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 457 EFISATMHRYRLERD-------EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
+ + E D E KAFQ FDK+++G ++ +L + G + D
Sbjct: 62 QITGL-IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE 120
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E++ V+ D++G I+Y++F +
Sbjct: 121 -VDELLKGVEVDSNGEIDYKKFIEDVLR 147
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 4e-15
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 383 KKMALKVIAEALSEEEIK-GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQL 441
E+ + +F D + +G ++ +L+ L LG KL++ EV +L
Sbjct: 69 VNEKELDATTKAKTEDFVKAFQ-VF---DKESTGKVSVGDLRYMLTGLGEKLTDAEVDEL 124
Query: 442 MDAADVDGNGTIDYIEFI 459
+ +VD NG IDY +FI
Sbjct: 125 LKGVEVDSNGEIDYKKFI 142
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 8e-37
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV 447
K +AE LSEEEI GLK +F +DTD SGTIT++ELK GL R+GS+L E+E+K LMDAAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 448 DGNGTIDYIEFISATMH 464
D +GTIDY EFI+AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 96.4 bits (241), Expect = 1e-24
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 448 DGNGTIDYIEFISATMHRYRLERDE--HLYKAFQYFDKDNSGYITRDELETAMKDYGIG- 504
+G ID + A RL +E L + F+ D DNSG IT DEL+ +K G
Sbjct: 1 HSSGHIDDDDKHMAE----RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
E+ IK+++ D D G I+Y EF
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 39.0 bits (92), Expect = 2e-04
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 484 DNSGYITRDELETAMKDYGIGDE-ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+SG+I D+ + M + +E +KE+ +DTDN G I ++E ++
Sbjct: 1 HSSGHI--DDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR 51
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-36
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 63/304 (20%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L ++LGRG++ + + K + K V K+ IKREI+I+++L G
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKIL---KPVKKKK---IKREIKILENLRGGP 91
Query: 156 NIVEFRGAYEDRQSVH--LVMELCSGGELFDKIIAQG-------HYTEKAAAALCRAIVN 206
NI+ +D S LV E + + K + Q Y + + +A+
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYE----ILKAL-- 143
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
+CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+ P
Sbjct: 144 --DYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 199
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWA-----------------ETEKGI--- 304
E+L + Y +D+WS G +L ++ PF+ E
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259
Query: 305 --------FDAIL--KGGVDFE----SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
F+ IL +E SE L+S A D + K+L D + R+T+ E +E
Sbjct: 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 351 HPWM 354
HP+
Sbjct: 320 HPYF 323
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-36
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD--GNG 451
++++++ K F D G I Y + + LG + EV +++ D +
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 452 TIDYIEFISATMHRYRLERD----EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DE 506
+D+ F+ + R E + F+ FDK+ +G + EL + G E
Sbjct: 64 RVDFETFLPM-LQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE 122
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
++ ++ D++G INYE F + S
Sbjct: 123 EEVETVL-AGHEDSNGCINYEAFLKHILS 150
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 4e-36
Identities = 35/205 (17%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 336 IQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALS 395
+ D +K+ + + G + P + + R+ + + M +
Sbjct: 1 MGDDEKKEKKKKSKKKAEEEGGDAPAAPPAPKPPSQKRRAQRSGSNVFAM--------FT 52
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
+ +++ K F +D DK G I+ +++ LG +E E+ ++ + G I++
Sbjct: 53 QHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPINF 108
Query: 456 IEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKE 511
F++ D + + AF FD+ + G + L+ ++ +G + + +
Sbjct: 109 TMFLTI-FGDRIAGTDEEDVIVNAFNLFDEGD-GKCKEETLKRSLTTWGEKFSQD-EVDQ 165
Query: 512 IISEVDTDNDGRINYEEFCTMMRSG 536
+SE D +G I+ ++F ++ G
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILTKG 190
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-35
Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 11/150 (7%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD--GNG 451
S+ K F D IT ++ LG + E+ +++ +
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 452 TIDYIEFISATMHRYRLERDEH----LYKAFQYFDKDNSGYITRDELETAMKDYG--IGD 505
I + EF+ + +D+ + + FDK+ +G + EL + G + +
Sbjct: 62 AITFEEFLPM-LQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE 120
Query: 506 EASIKEIISEVDTDNDGRINYEEFCTMMRS 535
E ++E++ + D++G INYE F + S
Sbjct: 121 EE-VEELMKGQE-DSNGCINYEAFVKHIMS 148
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-35
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 36/276 (13%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
++I + + +GRG FG+ A K ++ ++ +R+ E++
Sbjct: 6 DYKEI----EVEEVVGRGAFGVVCKAKWR--AKDVAIK-----QIESESERKAFIVELRQ 54
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAI 204
+ ++ NIV+ GA V LVME GG L++ + +YT A + C
Sbjct: 55 LSRVN-HPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC 111
Query: 205 ---VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
V +H ++HRDLKP N LL GG +LK DFG + I GSA
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGTACDIQTHMTNN--KGSA 167
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFW--AETEKGIFDAILKGG---VDF 315
++APEV S Y ++ DV+S G+IL+ +++ PF I A+ G +
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK 227
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ + L+ + +DP +R + E+++
Sbjct: 228 NLPKPI------ESLMTRCWSKDPSQRPSMEEIVKI 257
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-35
Identities = 70/295 (23%), Positives = 113/295 (38%), Gaps = 49/295 (16%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-----REIQIMQHLSGQQ- 155
+G G +G Y + +G+ A KS+ ++ N RE+ +++ L +
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVALLRRLEAFEH 73
Query: 156 -NIVEFR-----GAYEDRQSVHLVMELCSG--GELFDKIIAQGHYTEKAAAALCRAIVNV 207
N+V + V LV E DK + L R +
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-PPPGLPAETIKDLMRQFLRG 132
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ H ++HRDLKPEN +L G +K DFGL+ +V + +Y APE
Sbjct: 133 LDFLHANCIVHRDLKPEN-ILVTSGG--TVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 268 VL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKG--------GV- 313
VL + +Y +D+WS G I + P F +E IFD I G
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI--GLPPEDDWPRDV 247
Query: 314 ---DFESEPWL---------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
P + +S L+ +ML +P KRI++ L+H ++ +
Sbjct: 248 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-34
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
L LS +++ + D + +F + + L + F+ D D SG+
Sbjct: 2 LTDILSPSDIAAAL--RDCQAPDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGF 57
Query: 489 ITRDELETAMKDYGIGDEAS----IKEIISEVDTDNDGRINYEEFCTMMRS 535
I DEL+ ++ + G K ++ D D DG+I EEF M++S
Sbjct: 58 IEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-31
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 367 SAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGL 426
S + + ++ +A + I+ +S++ LK +F +D D+SG I +ELK L
Sbjct: 9 SDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYFL 67
Query: 427 ARLGS---KLSETEVKQLMDAADVDGNGTIDYIEFI 459
R S L+ +E K + AAD DG+G I EF
Sbjct: 68 QRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQ 103
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-34
Identities = 81/330 (24%), Positives = 132/330 (40%), Gaps = 61/330 (18%)
Query: 83 TVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK 142
+ + + + G+G FG L E STG S A K ++ QD
Sbjct: 12 AAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI-------QDPRFRN 64
Query: 143 REIQIMQHLSGQQ--NIVEFR-----GAYEDRQSV--HLVMELCSGGELFDKIIAQGHYT 193
RE+QIMQ L+ NIV+ + DR+ + ++VME + + +
Sbjct: 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV--PDTLHRCCRNYYRR 122
Query: 194 EKAAAA---------LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244
+ A L R+I + H + V HRD+KP N L++ DG LK DFG
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCL--HLPSVNVCHRDIKPHNVLVNEADG--TLKLCDFGS 178
Query: 245 SVFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302
+ + + + S YY APE++ + Y +D+WS G I ++ G P F +
Sbjct: 179 AKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238
Query: 303 GIFDAILK-------------------------GGVDFE---SEPWLLISDSAKDLVRKM 334
G I++ G+ + S+ L + A DL+ +
Sbjct: 239 GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSAL 298
Query: 335 LIQDPKKRITSAEVLEHPWMREGGEASDKP 364
L P++R+ E L HP+ E + + K
Sbjct: 299 LQYLPEERMKPYEALCHPYFDELHDPATKL 328
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-34
Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 5/110 (4%)
Query: 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRD 492
E K ++ Y + + M + L K F IT +
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDMLPV-MAEKMDVEEFVSELCKGFSLLADPERHLITAE 60
Query: 493 ELETAMKDYGIGD--EASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
L GI + + ++ E D D DG +N EFC +M +P+
Sbjct: 61 SLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEM 110
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-12
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-KLSETEVKQLMD 443
MA K+ E E L F+ + + IT E L+ LG +S+ + + ++
Sbjct: 29 MAEKMDVEEFVSE----LCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84
Query: 444 AADVDGNGTIDYIEFISATMHR----YRLERDEHLYKAFQYFDKDNS 486
D+DG+G ++ EF M R + + L KA +++
Sbjct: 85 EGDLDGDGALNQTEFC-VLMVRLSPEMMEDAETWLEKALTQELCNHN 130
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-33
Identities = 19/167 (11%), Positives = 57/167 (34%), Gaps = 26/167 (15%)
Query: 393 ALSEEEIKGLKTMFANM-DTDKSGTITYEELKTGLARL----GSKLSETEVKQLMDA--- 444
L++ + + +K F D + G+I + + + R LS+ + K + +
Sbjct: 1 GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLED 60
Query: 445 --------ADVDGNGTIDYIEFISATMHRYRLERDE---------HLYKAFQYFDKDNSG 487
AD++ + + + E+++ + + F+ D G
Sbjct: 61 EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ +E + K++ + A + + + + + + +
Sbjct: 121 IVDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 9e-13
Identities = 17/149 (11%), Positives = 47/149 (31%), Gaps = 15/149 (10%)
Query: 366 GSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANM----DTDKSGTITYEE 421
+ M + K++ +++A + L+ + ++ D +K +++EE
Sbjct: 22 HDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81
Query: 422 LKTGLARLGSKLSETE---------VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472
+ + + L DV G+G +D EF + ++L+ +
Sbjct: 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNY-CKNFQLQCAD 140
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDY 501
+ + + +
Sbjct: 141 -VPAVYNVITDGGKVTFDLNRYKELYYRL 168
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 2e-12
Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 16/113 (14%)
Query: 375 QFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS 434
++ AM + K +A L + +F MD G + EE + L
Sbjct: 81 EYLAMWE-KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQ 137
Query: 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSG 487
+V + + G T D + LY ++G
Sbjct: 138 CADVPAVYNVITDGGKVTFDLNRYK-------------ELYYRLLTSPAADAG 177
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-33
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSK-----LSETEVKQLMDAADVDGNGTIDYI 456
L FA++ + G I +EL+ L + G + + ++ D D +GT+ +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 457 EFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISE 515
EF + F FD D SG + EL+ A+ G + ++ I
Sbjct: 63 EFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR 116
Query: 516 VDTDNDGRINYEEFCTMM 533
G+I ++++
Sbjct: 117 Y--STSGKITFDDYIACC 132
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-17
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
+ G + F + D+D+SGT+ +EL+ L +G +L+ V + +G I + ++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA--KRYSTSGKITFDDY 128
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYIT---RDELETAM 498
I+ + +L L +F+ D G + D ++ M
Sbjct: 129 IACCV---KLRA---LTDSFRRRDSAQQGMVNFSYDDFIQCVM 165
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-09
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query: 478 FQYFDK--DNSGYITRDELETAMKDYGIGD------EASIKEIISEVDTDNDGRINYEEF 529
+ YF G I DEL+ + GI + + ++S +D D G + + EF
Sbjct: 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF 64
Query: 530 CTMMR 534
+
Sbjct: 65 KELWA 69
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-33
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 32/298 (10%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
+ S P + T+ +I K++G+G FG+ + + A KS++
Sbjct: 2 AMGGSEFPKSRLPTL---ADNEI----EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLIL 54
Query: 130 RKLVNKQD----REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDK 185
+ + ++ +RE+ IM +L+ NIV+ G +VME G+L+ +
Sbjct: 55 GDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLM--HNPPRMVMEFVPCGDLYHR 111
Query: 186 IIAQGH-YTEKAAAALCRAIVNVVH--HCHFMGVMHRDLKPENFLLSNKDGGA--MLKAT 240
++ + H L I + ++HRDL+ N L + D A K
Sbjct: 112 LLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFW 297
DFGLS ++G+ ++APE + SY ++ D +S +ILY +L+G PF
Sbjct: 172 DFGLSQQSVHSV--SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF- 228
Query: 298 AETEKGIFDAILKGGVDFESEPWLLISDSA----KDLVRKMLIQDPKKRITSAEVLEH 351
E + E I + ++++ DPKKR + +++
Sbjct: 229 --DEYSYGKIKFINMIREEGLR-PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-33
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 69/331 (20%)
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
++ ++V +++ ++ L K +G+G FG + TG A K + + N ++
Sbjct: 3 KQYDSVECPFCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKV---LMEN--EK 56
Query: 139 EDIK----REIQIMQHLSGQQNIV--------EFRGAYEDRQSVHLVMELC----SGGEL 182
E REI+I+Q L +N+V + + S++LV + C +G L
Sbjct: 57 EGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--L 113
Query: 183 FDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
+ +T + + ++N +++ H ++HRD+K N L++ +LK DF
Sbjct: 114 LSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADF 168
Query: 243 GLSVFID-----EGKVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPP 295
GL+ + Y + V + +Y PE+L R YG ID+W AG I+ + + P
Sbjct: 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPI 228
Query: 296 FWAETEKG----IFDAILKG--------GV----DFESE--------------PWLLISD 325
TE+ I L G V +E +
Sbjct: 229 MQGNTEQHQLALISQ--LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDP 286
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
A DL+ K+L+ DP +RI S + L H +
Sbjct: 287 YALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 6e-33
Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 16/188 (8%)
Query: 361 SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYE 420
+P + ++ ++ + + ++ E++ L F + SG + E
Sbjct: 15 QRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF--KNECPSGVVNEE 72
Query: 421 ELKTGLARLGSKLSETE-VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479
K A+ + L +A D G++ + +F++A R E L F
Sbjct: 73 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 132
Query: 480 YFDKDNSGYITRDELETAMK---------DYGIGDEASIKE----IISEVDTDNDGRINY 526
+D + GYI ++E+ +K Y + E + ++ ++D + DG +
Sbjct: 133 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 192
Query: 527 EEFCTMMR 534
+EF +
Sbjct: 193 DEFLESCQ 200
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 9e-33
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 13/145 (8%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
+ K F+ D +G I + L G + E+ ++ + +D
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDME 57
Query: 457 EFISATMHRYRLERDEH----LYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
+F+ ++R K FQ FDKD +G I EL + G + +E +
Sbjct: 58 QFLQV-LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNE-EMD 115
Query: 511 EIISEVDTDNDGRINYEEFCTMMRS 535
E++ V DG +NY +F M+ +
Sbjct: 116 ELLKGVPVK-DGMVNYHDFVQMILA 139
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 2e-12
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 392 EALSEEEI-KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
EE KG + +F D D +G I EL+ L LG KLS E+ +L+ V +
Sbjct: 71 MPGDPEEFVKGFQ-VF---DKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-D 125
Query: 451 GTIDYIEFI 459
G ++Y +F+
Sbjct: 126 GMVNYHDFV 134
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-32
Identities = 87/361 (24%), Positives = 140/361 (38%), Gaps = 90/361 (24%)
Query: 62 QPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNS 121
M ++A + PE V G+ + + YT +G G +G+ +N
Sbjct: 1 HHHHHHMAAAAAAG-----PEMVRGQVFD-VGPRYTNLSYIGEGAYGMVCSAYDNLNKVR 54
Query: 122 YACKSILKRKLVNKQDREDIK---REIQIMQHLSGQQNIVEFR-----GAYEDRQSVHLV 173
A K K+ + + + REI+I+ +NI+ E + V++V
Sbjct: 55 VAIK-----KISPFEHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIV 108
Query: 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM-------------GVMHRD 220
+L +L K++ H + H C+F+ V+HRD
Sbjct: 109 QDLM-ETDL-YKLLKTQHLSND-------------HICYFLYQILRGLKYIHSANVLHRD 153
Query: 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----VGSAYYVAPEVL--RRSYG 274
LKP N LL N LK DFGL+ D + V + +Y APE++ + Y
Sbjct: 154 LKPSN-LLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAK-- 328
K ID+WS G IL +LS P F + I + G + + +I+ A+
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL---GSPSQEDLNCIINLKARNY 267
Query: 329 ------------------------DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
DL+ KML +P KRI + L HP++ + + SD+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
Query: 365 I 365
I
Sbjct: 328 I 328
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-32
Identities = 69/305 (22%), Positives = 118/305 (38%), Gaps = 59/305 (19%)
Query: 96 YTLGKELGRGQFGITYLCTE-NSTGNSYACKSILKRKLVNKQDRED-------IKREIQI 147
Y E+G G +G + + + G A K + + + I RE+ +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-------RVQTGEEGMPLSTI-REVAV 64
Query: 148 MQHLSGQQ--NIVEFR-----GAYEDRQSVHLVMELCSG--GELFDKIIAQGHYTEKAAA 198
++HL + N+V + + LV E DK+ + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIK 123
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
+ ++ + H V+HRDLKP+N L+++ +K DFGL+ +V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVV 180
Query: 259 GSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGV 313
+ +Y APEVL + SY +D+WS G I + P F ++ I D I G+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI---GL 237
Query: 314 -------DFESEPWL---------------LISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ P I + KDL+ K L +P KRI++ L H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 352 PWMRE 356
P+ ++
Sbjct: 298 PYFQD 302
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-32
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 361 SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYE 420
+D + + F A + + L ++ +K +F +D DKSG I +
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 421 ELKTGLARL---GSKLSETEVKQLMDAADVDGNGTIDYIEFI 459
EL + L LS E K LM A D DG+G I EF
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 6e-31
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
+ LS ++K+ + A + D+ +F + + + + K F DKD SG+
Sbjct: 2 MTDLLSAEDIKKAIGAFTAAD--SFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGF 57
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
I DEL + +K + K +++ D D DG+I EEF T++
Sbjct: 58 IEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-32
Identities = 79/354 (22%), Positives = 131/354 (37%), Gaps = 92/354 (25%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREI 145
G + Y+LGK LG G FGI + +G +A K +L QD RE+
Sbjct: 1 GLETSSKK--YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL-------QDPRYKNREL 51
Query: 146 QIMQHLSGQQNIVEFR--------------------------------------GAYEDR 167
IM+ L NI++
Sbjct: 52 DIMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQN 110
Query: 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAA---------LCRAIVNVVHHCHFMGVMH 218
+ ++++ME + K++ + ++ L RA V H +G+ H
Sbjct: 111 KYLNVIMEYV--PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA----VGFIHSLGICH 164
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKE 276
RD+KP+N L+++KD LK DFG + + + + S +Y APE++ Y
Sbjct: 165 RDIKPQNLLVNSKDN--TLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPS 222
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-----------------GGVDF---E 316
ID+WS G + L+ G P F ET I++ V F +
Sbjct: 223 IDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK 282
Query: 317 SEPWLLI-----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
++ W I A DL+ ++L +P RI E + HP+ + + +
Sbjct: 283 AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 6e-32
Identities = 82/351 (23%), Positives = 134/351 (38%), Gaps = 64/351 (18%)
Query: 55 KMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT 114
K + M S + +G + + Y K +G G GI
Sbjct: 26 KQVDVSYIAKHYNMSKSKVDNQFYS---VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAY 82
Query: 115 ENSTGNSYACKSILKRKLVNK-QDREDIK---REIQIMQHLSGQQNIVEFR------GAY 164
+ + A K KL Q++ K RE+ +M+ + +NI+
Sbjct: 83 DAVLDRNVAIK-----KLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTL 136
Query: 165 EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPE 224
E+ Q V+LVMEL ++I + + L ++ + H H G++HRDLKP
Sbjct: 137 EEFQDVYLVMEL--MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Query: 225 NFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAG 283
N ++ D LK DFGL+ + V + YY APEV L Y + +D+WS G
Sbjct: 194 N-IVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 284 VILYILLSGVPPFWAETEKGIFDAIL---------------------------KGGVDFE 316
I+ ++ F ++ ++ G+ F
Sbjct: 251 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 310
Query: 317 -----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 311 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 9e-32
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQ 146
++ TL + +G G FG Y G+ A K+ + E++++E +
Sbjct: 5 DFAEL----TLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAK 58
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI-- 204
+ L NI+ RG ++ LVME GG L +++ I
Sbjct: 59 LFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQIAR 116
Query: 205 -VNVVHHCHFMGVMHRDLKPENFLLSNKDGGA-----MLKATDFGLSVFIDEGKVYRDIV 258
+N +H + ++HRDLK N L+ K +LK TDFGL+
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAA 175
Query: 259 GSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPF 296
G+ ++APEV+R S + K DVWS GV+L+ LL+G PF
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-31
Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 47/320 (14%)
Query: 54 PKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLC 113
P+M+ R P K+S TS +Q+ + P E + +G+ +G+G+FG Y
Sbjct: 2 PEMNLSLLSARSFPRKASQTSI-FLQEWDI----PFEQL----EIGELIGKGRFGQVYHG 52
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173
+ A + ++ + N+ + KRE+ + +N+V F GA + ++
Sbjct: 53 RWHGE---VAIR-LIDIERDNEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLAII 107
Query: 174 MELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD 232
LC G L+ + A+ + + IV + + H G++H+DLK +N N
Sbjct: 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK 167
Query: 233 GGAMLKATDFGLS------VFIDEGKVYRDIVGSAYYVAPEVLRRS----------YGKE 276
+ TDFGL R G ++APE++R+ + K
Sbjct: 168 ----VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGI-FDAILKGGVDFESEPWLLISDSA----KDLV 331
DV++ G I Y L + PF K +AI+ + +P L D++
Sbjct: 224 SDVFALGTIWYELHAREWPF-----KTQPAEAII-WQMGTGMKP-NLSQIGMGKEISDIL 276
Query: 332 RKMLIQDPKKRITSAEVLEH 351
+ ++R T ++++
Sbjct: 277 LFCWAFEQEERPTFTKLMDM 296
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 4e-31
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 24/217 (11%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
G+ LG+G FG T TG K +++ +++ + +E+++M+ L N
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+++F G + ++ + E GG L I + Y + + I + + + H M
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD---------------IVGS 260
++HRDL N L+ + DFGL+ + + K + +VG+
Sbjct: 129 IIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 261 AYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF 296
Y++APE++ RSY +++DV+S G++L ++ V
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 8e-31
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
+ LS ++ + T + +F T ++ + + F++ D D SGY
Sbjct: 2 ITDILSAEDIAAALQE--CQDPDTFEPQKFF-QTSGLSKMSASQ-VKDIFRFIDNDQSGY 57
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ DEL+ ++ + E+ K ++ D D DG+I +EF M+ S
Sbjct: 58 LDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 3e-29
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 369 VLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR 428
+ + +++ + + + LS+ +K +F +D D+SG + +ELK L +
Sbjct: 11 IAAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQK 69
Query: 429 LGS---KLSETEVKQLMDAADVDGNGTIDYIEFIS 460
S +L+E+E K LMDAAD DG+G I EF
Sbjct: 70 FQSDARELTESETKSLMDAADNDGDGKIGADEFQE 104
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 9e-31
Identities = 72/342 (21%), Positives = 128/342 (37%), Gaps = 82/342 (23%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
G+P +D R Y L ++LG G F +L + A K I++ K E + E
Sbjct: 12 KGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMK-IVRGD---KVYTEAAEDE 65
Query: 145 IQIMQHLS----------GQQNIVEFRGA--YEDRQSVH--LVMELCSGGELFDKIIAQG 190
I+++Q ++ G +I++ ++ VH +V E+ G L I
Sbjct: 66 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE 124
Query: 191 H--YTEKAAAALCRAIVNVVHHCH-FMGVMHRDLKPENFLLSNKD---GGAMLKATDFGL 244
H + + ++ + + H G++H D+KPEN L+ D +K D G
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 245 SVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG 303
+ + DE I + Y +PEV L +G D+WS +++ L++G F +
Sbjct: 185 ACWYDE-HYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242
Query: 304 -------------------------------IFDA-----------------ILKGGVDF 315
F++ +L F
Sbjct: 243 YTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF 302
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
+ ISD + ML DP+KR + ++ HPW+++
Sbjct: 303 SKDEAKEISD----FLSPMLQLDPRKRADAGGLVNHPWLKDT 340
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-30
Identities = 78/311 (25%), Positives = 128/311 (41%), Gaps = 53/311 (17%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
+ + Y K +G G GI + + A K + R N+ + RE+ +M+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKC 80
Query: 151 LSGQQNIVEFR------GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
+ +NI+ + E+ Q V++VMEL L ++I + + L +
Sbjct: 81 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQM-ELDHERMSYLLYQM 136
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ + H H G++HRDLKP N ++ D LK DFGL+ + V + YY
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSN-IVVKSD--CTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 265 APEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL-------------- 309
APEV L Y + +D+WS G I+ ++ G F ++ ++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253
Query: 310 -------------KGGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITS 345
G FE SE L + A+DL+ KML+ D KRI+
Sbjct: 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313
Query: 346 AEVLEHPWMRE 356
E L+HP++
Sbjct: 314 DEALQHPYINV 324
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-30
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P D+ + +++G G FG + + G+ A K IL + + + + RE+ I
Sbjct: 35 PWCDL----NIKEKIGAGSFGTVHRAEWH--GSDVAVK-ILMEQDFHAERVNEFLREVAI 87
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAI 204
M+ L NIV F GA ++ +V E S G L+ + G E+ ++ +
Sbjct: 88 MKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 205 VNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSA 261
+++ H ++HR+LK N L+ K +K DFGLS + G+
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKKY---TVKVCDFGLSRLKASTFLSSKSAAGTP 203
Query: 262 YYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF 296
++APEVLR ++ DV+S GVIL+ L + P+
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 2e-30
Identities = 84/332 (25%), Positives = 136/332 (40%), Gaps = 76/332 (22%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK---REIQI 147
D+ Y K LG G G+ + +N A K K+V D + +K REI+I
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK-----KIVL-TDPQSVKHALREIKI 61
Query: 148 MQHLSGQQNIVE--------------FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYT 193
++ L NIV+ G+ + SV++V E +L ++ QG
Sbjct: 62 IRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDL-ANVLEQGPLL 118
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
E+ A ++ + + H V+HRDLKP N ++ +D +LK DFGL+ +D
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMDPHYS 176
Query: 254 YRDI----VGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG---- 303
++ + + +Y +P +L +Y K ID+W+AG I +L+G F G
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF-----AGAHEL 231
Query: 304 -----IFDAI-----------------------LKGGVDFESEPWLL--ISDSAKDLVRK 333
I ++I + LL IS A D + +
Sbjct: 232 EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ---LLPGISREAVDFLEQ 288
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
+L P R+T+ E L HP+M D+PI
Sbjct: 289 ILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-30
Identities = 75/343 (21%), Positives = 121/343 (35%), Gaps = 74/343 (21%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHL--- 151
Y + LG G FG C +++ G S I++ N RE + EI +++ +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIKEK 76
Query: 152 --SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIVN 206
+ V + + + EL G F+ + + ++ + + +
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE-FLKENNFQPYPLPHVRHMAYQLCH 134
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD----------------GGAMLKATDFGLSVFIDE 250
+ H + H DLKPEN L N + ++ DFG + F E
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE 194
Query: 251 GKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE-------- 301
IV + +Y PEV L + + DVWS G IL+ G F
Sbjct: 195 -HHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 302 --KGIFDAIL-----------KGGVDFESEP--------------WLLISDSAK-----D 329
G + + KGG+ ++ ++ DS + D
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSR 372
L+R+ML DP +RIT AE L HP+ S SR
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNPSR 355
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 5e-30
Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 44/310 (14%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
++ + Y +G G +G + TG A K + R + + RE+++++H
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKH 84
Query: 151 LSGQQNIVEFR------GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
+ +N++ + E+ V+LV L G +L + I+ T+ L I
Sbjct: 85 MK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQI 141
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ + + H ++HRDLKP N L N+D LK DFGL+ + V + +Y
Sbjct: 142 LRGLKYIHSADIIHRDLKPSN-LAVNEDC--ELKILDFGLARHTADEMT--GYVATRWYR 196
Query: 265 APEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAI---------- 308
APE++ Y + +D+WS G I+ LL+G F K I +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 309 ---------LKGGVDFESEPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
++ + + + A DL+ KML+ D KRIT+A+ L H +
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
Query: 356 EGGEASDKPI 365
+ + D+P+
Sbjct: 317 QYHDPDDEPV 326
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 63/337 (18%), Positives = 114/337 (33%), Gaps = 86/337 (25%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-----QDREDIK--- 142
++ YT+ + + G +G +S G A K + + D K
Sbjct: 19 AMQSPYTVQRFISSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77
Query: 143 REIQIMQHLSGQQNIVEFR-----GAYEDRQSVHLVMEL----------CSGGELFDK-- 185
REI+++ H NI+ R ++LV EL + +
Sbjct: 78 REIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 186 --IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243
+ + + H H GV+HRDL P N +L + + DF
Sbjct: 137 QYFMYH----------ILLGL----HVLHEAGVVHRDLHPGN-ILLADNN--DITICDFN 179
Query: 244 LSVFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE 301
L+ V +Y APE++ + + K +D+WSAG ++ + + F
Sbjct: 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF----- 234
Query: 302 KG---------IFDA--------------------ILKGGVDFESEPWLLI----SDSAK 328
+G I + + + + W + A
Sbjct: 235 RGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL 294
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
DL+ KML +P++RI++ + L HP+ + D
Sbjct: 295 DLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTE 331
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-29
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLSGQ 154
Y + +LG G YL + A K + K++ + +RE+ LS
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIK-AIFIPPREKEETLKRFEREVHNSSQLS-H 70
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
QNIV E+ +LVME G L + I + G + A I++ + H H M
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEVLRRS 272
++HRD+KP+N L+ + K DFG++ + E + + ++G+ Y +PE +
Sbjct: 131 RIVHRDIKPQNILID-SNKTL--KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 273 Y-GKEIDVWSAGVILYILLSGVPPFWAETE-----KGIFDAILKGGVDFESEPWLLISDS 326
+ D++S G++LY +L G PPF ET K I D++ D + I S
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKD----IPQS 243
Query: 327 AKDLVRKMLIQDPKKRITSAEVL 349
+++ + +D R + + +
Sbjct: 244 LSNVILRATEKDKANRYKTIQEM 266
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-29
Identities = 33/220 (15%), Positives = 77/220 (35%), Gaps = 27/220 (12%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
+ + +L G + GN K +LK + + + D E
Sbjct: 8 DFKQL----NFLTKLNENHSGELWKGRWQ--GNDIVVK-VLKVRDWSTRKSRDFNEECPR 60
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHL--VMELCSGGELFDKIIAQGHYTEKAAAALCRAI- 204
++ S N++ GA + + H + G L++ + ++ + A+ A+
Sbjct: 61 LRIFS-HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 205 ----VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
+ +H + + L + ++ + + + + +
Sbjct: 120 MARGMAFLHTLEPL-IPRHALNSRSVMIDEDM---TARISMADVKFSFQSPGR----MYA 171
Query: 261 AYYVAPEVLRRS----YGKEIDVWSAGVILYILLSGVPPF 296
+VAPE L++ + D+WS V+L+ L++ PF
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 3e-29
Identities = 76/310 (24%), Positives = 125/310 (40%), Gaps = 63/310 (20%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-QDREDIK---REIQ 146
++ + Y +G G +G + +G A K KL Q K RE+
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK-----KLSRPFQSEIFAKRAYRELL 75
Query: 147 IMQHLSGQQNIVEFR------GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL 200
+++H+ +N++ + + +LVM +L KI+ ++E+ L
Sbjct: 76 LLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDL-QKIMGL-KFSEEKIQYL 131
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ + + H GV+HRDLKP N L N+D LK DFGL+ D V +
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGN-LAVNEDC--ELKILDFGLARHADAEMT--GYVVT 186
Query: 261 AYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG---------IFDAI- 308
+Y APEV+ Y + +D+WS G I+ +L+G F KG I
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF-----KGKDYLDQLTQILKVTG 241
Query: 309 ------------------LKGGVDFESEPWLLI----SDSAKDLVRKMLIQDPKKRITSA 346
++ + + + S A DL+ KML D KR+T+A
Sbjct: 242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301
Query: 347 EVLEHPWMRE 356
+ L HP+
Sbjct: 302 QALTHPFFEP 311
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-29
Identities = 87/349 (24%), Positives = 140/349 (40%), Gaps = 66/349 (18%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
MS+P P R + V E +R Y + +G G +G +
Sbjct: 1 MSSPPP-------------ARSGFYRQEVTKTAWE-VRAVYRDLQPVGSGAYGAVCSAVD 46
Query: 116 NSTGNSYACKSILKRKLVNK-QDREDIK---REIQIMQHLSGQQNIVEFR------GAYE 165
TG A K KL Q K RE+++++H+ +N++ +
Sbjct: 47 GRTGAKVAIK-----KLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLD 100
Query: 166 DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225
D +LVM G +L K++ E L ++ + + H G++HRDLKP N
Sbjct: 101 DFTDFYLVMPFM-GTDL-GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN 158
Query: 226 FLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAG 283
L N+D LK DFGL+ D V + +Y APEV+ Y + +D+WS G
Sbjct: 159 -LAVNEDC--ELKILDFGLARQADSEMT--GYVVTRWYRAPEVILNWMRYTQTVDIWSVG 213
Query: 284 VILYILLSGVPPFWAETE----KGIFDAI-------------------LKGGVDFESEPW 320
I+ +++G F K I +KG + E + +
Sbjct: 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF 273
Query: 321 LLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
I S A +L+ KML+ D ++R+T+ E L HP+ + D+P
Sbjct: 274 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQ 322
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-29
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLG-----SKLSETEVKQLMDAADVDGNGTIDYI 456
+ T F + + G + EEL+ L + G S S + ++ D D G + +
Sbjct: 2 VYTYF-SAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 457 EFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISE 515
F + F D+D SG + EL A+ G ++ I+
Sbjct: 61 AFKEL------WAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114
Query: 516 VDTDNDGRINYEEFCTMM 533
+GRI ++++
Sbjct: 115 Y--SKNGRIFFDDYVACC 130
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 3e-18
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
+ K F +D D SGT+ + EL+ + +G +LS + ++ NG I + ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDY 126
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYIT---RDELETAM 498
++ + +L L F+ D G D L+ M
Sbjct: 127 VACCV---KLRA---LTDFFRKRDHLQQGSANFIYDDFLQGTM 163
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-11
Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 478 FQYFDK--DNSGYITRDELETAMKDYGIGD------EASIKEIISEVDTDNDGRINYEEF 529
+ YF G + +EL+ + GI + + +I+ +D D+ G++ + F
Sbjct: 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62
Query: 530 CTMMRS 535
+ +
Sbjct: 63 KELWAA 68
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 5e-29
Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 20/252 (7%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
M + + E+ G Y L + +GRG G Y +
Sbjct: 1 MGSSHHHHHH-SSGLVPRGSHMDGTAESREGTQFGP----YRLRRLVGRGGMGDVYEAED 55
Query: 116 NSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174
A K ++ L + R ++RE + L + ++V E +++ M
Sbjct: 56 TVRERIVALK-LMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYVDM 113
Query: 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234
L +G +L + QG A A+ R I + + H G HRD+KPEN L+S D
Sbjct: 114 RLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS-ADDF 172
Query: 235 AMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVLRRSYGKEI----DVWSAGVILYI 288
A L DFG++ + K+ + + VG+ YY+APE D+++ +LY
Sbjct: 173 AYL--VDFGIASATTDEKLTQLGNTVGTLYYMAPERFS---ESHATYRADIYALTCVLYE 227
Query: 289 LLSGVPPFWAET 300
L+G PP+ +
Sbjct: 228 CLTGSPPYQGDQ 239
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 7e-29
Identities = 85/335 (25%), Positives = 129/335 (38%), Gaps = 100/335 (29%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK---REIQI 147
+I + L LG G +G+ T TG A K K+ REI+I
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK-----KIEPFDKPLFALRTLREIKI 62
Query: 148 MQHLSGQQNIVEFR-----GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR 202
++H +NI+ ++E+ V+++ EL +L ++I+ ++
Sbjct: 63 LKHFK-HENIITIFNIQRPDSFENFNEVYIIQELM-QTDL-HRVISTQMLSD-------- 111
Query: 203 AIVNVVHHCHFM-------------GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
H +F+ V+HRDLKP N LL N + LK DFGL+ ID
Sbjct: 112 -----DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN-LLINSNC--DLKVCDFGLARIID 163
Query: 250 EGKVYRDIVGSA-----------YYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPF 296
E +Y APEV+ Y + +DVWS G IL L P F
Sbjct: 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
Query: 297 WAETEKG---------IFDAILKGGVDFESEPWLLISDSAK------------------- 328
G IF I G +++ + S A+
Sbjct: 224 -----PGRDYRHQLLLIFGII--GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 329 -------DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
DL+++ML+ DP KRIT+ E LEHP+++
Sbjct: 277 RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 9e-29
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 467 RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKEIISEVDTDNDGRI 524
R + +E + +AF+ FD + G I DE + M+ G +A ++E + E D D +G I
Sbjct: 3 RQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVI 62
Query: 525 NYEEFCTMMRSGT 537
+ EF +++
Sbjct: 63 DIPEFMDLIKKSK 75
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 8e-16
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGT 452
+ +++ + + F D + G I ++E K + ++G + L++ EV++ M AD DGNG
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 453 IDYIEFISATMHRYRLERDE 472
ID EF+ + + + E
Sbjct: 62 IDIPEFM-DLIKKSKNALKE 80
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 9e-29
Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 381 KLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE- 437
KLK ++ + +E+E++ F + SG + + + T+
Sbjct: 7 KLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTKF 64
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
+ + D + +G I++ EFI A R DE L AF+ +D DN GYITR+E+
Sbjct: 65 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 124
Query: 498 MK---------DYGIGDEASIKE----IISEVDTDNDGRINYEEFCTMMRS 535
+ +E + ++ I + +D + DG++ +EF ++
Sbjct: 125 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 74/332 (22%), Positives = 119/332 (35%), Gaps = 84/332 (25%)
Query: 95 FYTLGKELGRGQFGITY--LCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIM 148
F G ++GRG +G Y + YA K I + I REI ++
Sbjct: 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI---------EGTGISMSACREIALL 72
Query: 149 QHLSGQQNIVEFRGAYEDRQ--SVHLVMELCSGGELFD--KIIAQGHYTEKAAAA----- 199
+ L N++ + + V L+ + D II ++
Sbjct: 73 RELK-HPNVISLQKVFLSHADRKVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLPR 127
Query: 200 -----LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK-DGGAMLKATDFGLS-VFIDEGK 252
L I++ +H+ H V+HRDLKP N L+ + +K D G + +F K
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 253 VYRDIVGSA---YYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG---- 303
D+ +Y APE+L R Y K ID+W+ G I LL+ P F E
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
Query: 304 ---------IFDAI------------------------------LKGGVDFESEPWLLIS 324
IF+ + + + + +
Sbjct: 248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD 307
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
A L++K+L DP KRITS + ++ P+ E
Sbjct: 308 SKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-28
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE+ + +K F DT+K+G+I Y ELK + LG + + E+ +LM+ D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 454 DYIEFISATMHRYRLERD 471
+ +F+ M RD
Sbjct: 61 GFDDFLDI-MTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 3e-19
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ + + +AF FD + +G I EL+ AM+ G + I E+++E D + +G I ++
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 528 EFCTMM 533
+F +M
Sbjct: 64 DFLDIM 69
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 2e-28
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 381 KLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE- 437
KL K L + ++ EI+ F + SG + E+ + S +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
L D D NG I + EFI+ R +E L AF+ +D ++ GYIT DE+ T
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 498 MKDYG-------------IGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E +K+I +D + DG I +EF +
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 83/366 (22%), Positives = 134/366 (36%), Gaps = 109/366 (29%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-QDREDIK-- 142
G+ + + Y L K+LG+G +GI + + TG A K K+ + Q+ D +
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK-----KIFDAFQNSTDAQRT 55
Query: 143 -REIQIMQHLSGQQNIVEFRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA 199
REI I+ LSG +NIV ++ + V+LV + +L +I
Sbjct: 56 FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-ETDL-HAVIRANILEP----- 108
Query: 200 LCRAIVNVVHHCHFM-------------GVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
VH + + G++HRD+KP N LL N + +K DFGLS
Sbjct: 109 --------VHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL-NAEC--HVKVADFGLSR 157
Query: 247 FIDEGKVYRDIVGSA----------------------YYVAPEVL--RRSYGKEIDVWSA 282
+ + + + +Y APE+L Y K ID+WS
Sbjct: 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL 217
Query: 283 GVILYILLSGVPPF------------------------------------------WAET 300
G IL +L G P F
Sbjct: 218 GCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIR 277
Query: 301 EKGIFDAILKGGVDFES-EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359
+ D K P ++ A DL+ K+L +P KRI++ + L+HP++
Sbjct: 278 QSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHN 337
Query: 360 ASDKPI 365
+++P
Sbjct: 338 PNEEPN 343
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 4e-28
Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 16/156 (10%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE-VKQLMDAADVDGNGT 452
++ E++ L F + SG + E K A+ + L +A D G+
Sbjct: 15 FTKRELQVLYRGF--KNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 453 IDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK---------DYGI 503
+ + +F++A R E L F +D + GYI ++E+ +K Y +
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 132
Query: 504 GDEASIKE----IISEVDTDNDGRINYEEFCTMMRS 535
E + ++ ++D + DG + +EF +
Sbjct: 133 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 5e-10
Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464
+F DT ++G++ +E+ T L+ L +++ + D++ +G I+ E +
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 465 RYRLER------------DEHLYKAFQYFDKDNSGYITRDELETAMKDY 501
Y + +H+ FQ DK+ G +T DE + ++
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED 169
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 4e-28
Identities = 78/323 (24%), Positives = 115/323 (35%), Gaps = 72/323 (22%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHL--- 151
Y + LG G FG C ++ G + I+K N E + EIQ+++HL
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK----NVDRYCEAARSEIQVLEHLNTT 71
Query: 152 --SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNV 207
+ V+ +E + +V EL G +D I G + + I
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAM----------------LKATDFGLSVFIDEG 251
V+ H + H DLKPEN L D +K DFG + + DE
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE- 189
Query: 252 KVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------- 301
+V + +Y APEV L + + DVWS G IL G F
Sbjct: 190 HHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 302 -KGIFDA-ILKGG-----VDFESEPWLLISDSAK------------------------DL 330
G +++ + W S + + DL
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
++KML DP KRIT E L+HP+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPF 331
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 5e-28
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 15/149 (10%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-----LSETEVKQLMDAA 445
A + L F + G I +EL+ L + G + + ++
Sbjct: 24 GPAFPGQTQDPLYGYF-AAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82
Query: 446 DVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG- 504
D D +GT+ + EF + F FD D SG + EL+ A+ G
Sbjct: 83 DRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRL 136
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
++ I +G+I ++++
Sbjct: 137 SPQAVNSIAKRY--STNGKITFDDYIACC 163
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 9e-17
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
+ G + F + DTD+SGT+ +EL+ L +G +LS V + NG I + ++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDY 159
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYIT---RDELETAM 498
I+ + + L +F+ D G + D ++ M
Sbjct: 160 IACCV------KLRALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-11
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG------DEASIKEIISEVDTDNDG 522
+ + LY F G I DEL+ + GI + + + ++S +D D G
Sbjct: 30 QTQDPLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 88
Query: 523 RINYEEFCTMMRS 535
+ + EF +
Sbjct: 89 TMGFNEFKELWAV 101
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 5e-28
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--- 152
Y + K +G+G FG ++ A K +++ + K+ EI+I++HL
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALK-MVRNE---KRFHRQAAEEIRILEHLRKQD 154
Query: 153 --GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIVNV 207
N++ + R + + EL S L++ +I + + + +I+
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ H ++H DLKPEN LL + + +K DFG S + + +VY I S +Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCYEHQ-RVYTYIQ-SRFYRAPE 269
Query: 268 V-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE 301
V L YG ID+WS G IL LL+G P E E
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
D +++ L DP R+T + L HPW+R
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-27
Identities = 36/188 (19%), Positives = 74/188 (39%), Gaps = 21/188 (11%)
Query: 366 GSAVLSRMKQFRAMNKLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELK 423
GS+ S M L K L+ + SEEE+ F + +G IT ++ +
Sbjct: 1 GSSGSSGMGN-SKSGALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQ 57
Query: 424 TGLARLGSKLSETE-VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482
+ A+ + + + D + +GT+D+ E++ A + ++ L AF +D
Sbjct: 58 SIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYD 117
Query: 483 KDNSGYITRDEL---------------ETAMKDYGIGDEASIKEIISEVDTDNDGRINYE 527
D +G I+++E+ + D E ++I ++D ++ +
Sbjct: 118 VDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEK 177
Query: 528 EFCTMMRS 535
EF +
Sbjct: 178 EFIEGTLA 185
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-27
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E L AF+ FD+D G+IT DEL AM G + + +I E D D DGR+NYE
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 528 EFCTMMR 534
EF M+
Sbjct: 63 EFARMLA 69
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 6e-17
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+ ++ L+ F D D G IT +EL+ +A LG L + E+ ++ ADVD +G ++
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 455 YIEFI 459
Y EF
Sbjct: 61 YEEFA 65
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-27
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCT 531
+ + + F+ FD + G I+ EL A++ G ++ +++E+DTD DG I++ EF +
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 532 MMRSG 536
+
Sbjct: 63 FCNAN 67
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 1e-18
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
++ ++ +F DT+ G I+ EL L LGS ++ EV+++M D DG+G ID+
Sbjct: 2 ADD---MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDF 57
Query: 456 IEFISATMHRYRLERDEHLYKAF 478
EFI + + + K F
Sbjct: 58 NEFI--SFCNANPGLMKDVAKVF 78
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-27
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Query: 376 FRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE 435
+ + L EE+ L+++FA D ++SG + EE + L +
Sbjct: 3 HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60
Query: 436 TEVKQLMDAADVDGNGTIDYIEFIS 460
+ + + D D +G I + EF
Sbjct: 61 ADAEAVFQRLDADRDGAITFQEFAR 85
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 3e-23
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528
E L F D + SG + R+E + + + + +D D DG I ++E
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPA-DAEAVFQRLDADRDGAITFQE 82
Query: 529 FCTMMR 534
F
Sbjct: 83 FARGFL 88
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-27
Identities = 64/331 (19%), Positives = 111/331 (33%), Gaps = 80/331 (24%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLS-- 152
+ + +++G G FG LC YA K +++ N + K E I++ +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVK-VVR----NIKKYTRSAKIEADILKKIQND 91
Query: 153 --GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVV 208
NIV++ G + + L+ E G L++ I + + + C I+ +
Sbjct: 92 DINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKAL 150
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAM----------------------LKATDFGLSV 246
++ M + H DLKPEN LL + +K DFG +
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT 210
Query: 247 FIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE---- 301
F + I + Y APEV L + D+WS G +L L +G F
Sbjct: 211 FKSD-YHGSIIN-TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
Query: 302 ------KGIFD--------------------------------AILKGGVDFESEPWLLI 323
+K ++
Sbjct: 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK 328
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ D + +L DP R + AE+L+H ++
Sbjct: 329 HELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 8e-27
Identities = 64/261 (24%), Positives = 103/261 (39%), Gaps = 34/261 (13%)
Query: 96 YTLGKELGRGQFGITYLCT-ENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHL 151
Y + + G G YL N G K LV+ D E E Q + +
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG-----LVHSGDAEAQAMAMAERQFLAEV 136
Query: 152 SGQQNIVEFR--GAYEDRQSVH---LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
+IV+ + DR +VME G L A A I+
Sbjct: 137 V-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILP 193
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
+ + H +G+++ DLKPEN +L+ ++ LK D G I+ + + G+ + AP
Sbjct: 194 ALSYLHSIGLVYNDLKPENIMLT-EEQ---LKLIDLGAVSRINS---FGYLYGTPGFQAP 246
Query: 267 EVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
E++R D+++ G L L +P G+ E +P L DS
Sbjct: 247 EIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PEDDPVLKTYDS 296
Query: 327 AKDLVRKMLIQDPKKRITSAE 347
L+R+ + DP++R T+AE
Sbjct: 297 YGRLLRRAIDPDPRQRFTTAE 317
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-26
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 19/266 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLSGQ 154
Y LG+ LG G +L + A K +L+ L +RE Q L+
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAALN-H 71
Query: 155 QNIVEF--RGAYEDRQSVH--LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
IV G E +VME G L D + +G T K A + ++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY----RDIVGSAYYVAP 266
H G++HRD+KP N ++S K DFG++ I + ++G+A Y++P
Sbjct: 132 SHQNGIIHRDVKPANIMIS-ATNAV--KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 267 EVLRRSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI--LKGGVDFESEPWLLI 323
E R DV+S G +LY +L+G PPF ++ + A ++ S +
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--AYQHVREDPIPPSARHEGL 246
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVL 349
S +V K L ++P+ R +A +
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEM 272
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-26
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P I T+G+ +G G FG Y + A K +L Q + K E+ +
Sbjct: 22 PDGQI----TVGQRIGSGSFGTVYKGKWHGD---VAVK-MLNVTAPTPQQLQAFKNEVGV 73
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVN 206
++ NI+ F G + +V + C G L+ + ++ + K + R
Sbjct: 74 LRKTR-HVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS---VFIDEGKVYRDIVGSAYY 263
+ + H ++HRDLK N L +K DFGL+ + + GS +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 264 VAPEVLRRS----YGKEIDVWSAGVILYILLSGVPPF 296
+APEV+R Y + DV++ G++LY L++G P+
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 6e-26
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-REDIKREIQIMQHLS-- 152
Y + +G+G FG + A K I+K NK+ + E+++++ ++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-IIK----NKKAFLNQAQIEVRLLELMNKH 110
Query: 153 ---GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNV 207
+ IV + + R + LV E+ S L+D + + + +
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169
Query: 208 VHHCHF--MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ + ++H DLKPEN LL N + +K DFG S + + ++Y+ I S +Y +
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQLGQ-RIYQYIQ-SRFYRS 226
Query: 266 PEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE 301
PEV L Y ID+WS G IL + +G P F E
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
KDL+ +ML DPK RI L+H + ++
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKK 378
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 8e-26
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528
+ + F+ FD + G I+ EL A+K G ++ +++E+DTD DG I+++E
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 67
Query: 529 FCTMMRSG 536
F R+
Sbjct: 68 FTDFARAN 75
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 1e-24
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A + ++I + +F DT+ G I+ EL L LG ++ EV+++M D DG
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59
Query: 450 NGTIDYIEFISATMHRYRLERDEHLYKAF 478
+G I + EF R + + K F
Sbjct: 60 DGFISFDEFT--DFARANRGLVKDVSKIF 86
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-25
Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 63/301 (20%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HL 151
TL + +G+G++G + + G + A K + +D + RE ++ H
Sbjct: 11 TLLECVGKGRYGEVWRGSWQ--GENVAVKIF------SSRDEKSWFRETELYNTVMLRH- 61
Query: 152 SGQQNIVEFRGAYEDRQSVH----LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
+NI+ F + + L+ G L+D + + + +I +
Sbjct: 62 ---ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASG 117
Query: 208 VHHCHF--------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-- 257
+ H H + HRDLK +N L+ K+G D GL+V + D+
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILV-KKNG--QCCIADLGLAVMHSQSTNQLDVGN 174
Query: 258 ---VGSAYYVAPEVLR-------RSYGKEIDVWSAGVILYILLSGV----------PPFW 297
VG+ Y+APEVL K +D+W+ G++L+ + + PPF+
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
Query: 298 AETEKGIFDAILKGGVDFESE----PWLLISDSA----KDLVRKMLIQDPKKRITSAEVL 349
++ V + + P SD L+++ Q+P R+T+ +
Sbjct: 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294
Query: 350 E 350
+
Sbjct: 295 K 295
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 4e-25
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVD 517
I A +H+ + + F+ FD + I+R+E + + +E+
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 518 TDNDGRINYEEFCTMMRSGTPQPA 541
+ GR+ Y +F + S T
Sbjct: 71 VNAKGRLKYPDFLSRFSSETAATP 94
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 3e-22
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 383 KKMALKVIAEALSE---EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVK 439
A + I L + + F N DT K+ TI+ EE + R L++ +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFD 63
Query: 440 QLMDAADVDGNGTIDYIEFISA 461
+L + V+ G + Y +F+S
Sbjct: 64 RLWNEMPVNAKGRLKYPDFLSR 85
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 64/296 (21%), Positives = 106/296 (35%), Gaps = 53/296 (17%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
L + +G+G+FG + G A K I + RE EI L +N
Sbjct: 45 VLQESIGKGRFGEVWRGKWR--GEEVAVK-IFSSREERSWFRE---AEIYQTVMLR-HEN 97
Query: 157 IVEFRGAYEDRQSVH----LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
I+ F A LV + G LFD + + T + L + + + H H
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHLH 156
Query: 213 F--------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-----VG 259
+ HRDLK +N +L K+G D GL+V D DI VG
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKN-ILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 260 SAYYVAPEVLRRS-------YGKEIDVWSAGVILYILLSGV----------PPFWAETEK 302
+ Y+APEVL S K D+++ G++ + + P++
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273
Query: 303 GIFDAILKGGVDFESE----PWLLISDSA----KDLVRKMLIQDPKKRITSAEVLE 350
++ V + P S A ++R+ + R+T+ + +
Sbjct: 274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 6e-25
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 372 RMKQFRAMNKLKKMAL---KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR 428
+ +Q ++++ K L K ++ +++G K + D + +G I LK L +
Sbjct: 1 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFIS 460
LG + E+K+L+ T Y +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 8e-20
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD-EASIKEIISEVDTDNDGRINYE 527
+ E + + FD + +G I L+ ++ G+ +K++I EV + + +Y
Sbjct: 29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYP 88
Query: 528 EFCTMMRSGTPQPAKLI 544
+F MM K+I
Sbjct: 89 DFLRMMLGKRSAILKMI 105
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 1e-24
Identities = 78/436 (17%), Positives = 135/436 (30%), Gaps = 141/436 (32%)
Query: 43 QQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKEL 102
+ ++ + S++P I Y + +
Sbjct: 4 HEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMP--RPHSDWQIPDRYEIRHLI 61
Query: 103 GRGQFGITYLCTENSTGNSYACKSILKRKLVNK-QDREDIK---REIQIMQHLSGQQNIV 158
G G +G + A K K++ +D D K REI I+ L+ ++V
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIK-----KILRVFEDLIDCKRILREIAILNRLN-HDHVV 115
Query: 159 EFR-----GAYEDRQSVHLVMELC---------SGGELFDK----IIAQGHYTEKAAAAL 200
+ E +++V+E+ + L + ++ L
Sbjct: 116 KVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYN----------L 165
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
+ + H G++HRDLKP N L N+D +K DFGL+ +D + +
Sbjct: 166 LVGV----KYVHSAGILHRDLKPAN-CLVNQDC--SVKVCDFGLARTVDYPENGNSQLPI 218
Query: 261 A----------------------------YYVAPEVL--RRSYGKEIDVWSAGVILYILL 290
+ +Y APE++ + +Y + IDVWS G I LL
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Query: 291 SGVPPFWAETEKG-----------------------------------IFDAILKGGVDF 315
+ + A IF+ + G
Sbjct: 279 NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNIL---GTPS 335
Query: 316 ESEPWLLISDSAKDLVR--------------------------KMLIQDPKKRITSAEVL 349
E + L + AK +R +ML+ +P KRIT E L
Sbjct: 336 EEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECL 395
Query: 350 EHPWMREGGEASDKPI 365
HP+ +E A +
Sbjct: 396 AHPFFKEVRIAEVETN 411
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 1e-24
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
+ +F +D + G ++YEE+K +++ + +E ++ + + D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 3e-17
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTM 532
F+ D + G ++ +E++ + +E ++ I +D D +G I+ EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 533 MRS 535
S
Sbjct: 62 YGS 64
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 5e-14
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
+ L DV+G+G + Y E + + ++ ++ L F+ D D +G I ++E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 498 MK 499
Sbjct: 62 YG 63
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-05
Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 384 KMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL 429
K + +E+ ++ +F ++D D +G I E +
Sbjct: 23 KAFVSKKRAIKNEQLLQ---LIFKSIDADGNGEIDQNEFAKFYGSI 65
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 1e-24
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
+ +E L +AF+ FDKD +GYI+ EL M + G + ++++I E D D DG++NYE
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 528 EFCTMMRS 535
EF MM +
Sbjct: 66 EFVKMMMT 73
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 4e-17
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
+ + + LK F D D++G I+ EL+ + LG KL++ EV+Q++ AD+DG+G +
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQV 62
Query: 454 DYIEFI---SATMHRYRLERDEHLYKAF 478
+Y EF+ L + F
Sbjct: 63 NYEEFVKMMMTVRGGGGGNGWSRLRRKF 90
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-24
Identities = 69/338 (20%), Positives = 117/338 (34%), Gaps = 58/338 (17%)
Query: 56 MSAPQPQPRQQPM-KSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT 114
M+ P + + + S +S P V + I + K++G+G++G ++
Sbjct: 2 MTYIPPGESLRDLIEQSQSSGSGSGLPLLVQRTIAKQI----QMVKQIGKGRYGEVWMGK 57
Query: 115 ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH--- 171
G A K + RE EI + +NI+ F A
Sbjct: 58 WR--GEKVAVK-VFFTTEEASWFRE---TEIYQTVLMR-HENILGFIAADIKGTGSWTQL 110
Query: 172 -LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF--------MGVMHRDLK 222
L+ + G L+D + K+ L + V+ + H H + HRDLK
Sbjct: 111 YLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 223 PENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-----VGSAYYVAPEVLRRS----- 272
+N +L K+G D GL+V DI VG+ Y+ PEVL S
Sbjct: 170 SKN-ILVKKNG--TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226
Query: 273 --YGKEIDVWSAGVILYILLSGV----------PPFWAETEKGIFDAILKGGVDFESE-- 318
D++S G+IL+ + P+ ++ V +
Sbjct: 227 FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRP 286
Query: 319 --PWLLISDSA----KDLVRKMLIQDPKKRITSAEVLE 350
P SD L+ + +P R+T+ V +
Sbjct: 287 SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 8e-24
Identities = 39/281 (13%), Positives = 75/281 (26%), Gaps = 36/281 (12%)
Query: 71 SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
S+ P + V G + + R Y L G + + + A + +
Sbjct: 10 DRESSAPPDDVQLVPGARIANGR--YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQ 67
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG 190
++ ++ + + + + R +V E GG L + +A
Sbjct: 68 GVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGGLVVAEWIRGGSLQE--VADT 124
Query: 191 HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
+ A +++ H GV P +S DG +L
Sbjct: 125 SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI-DGDVVL--AYPA------- 174
Query: 251 GKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK 310
P+ + D+ G LY LL P + +
Sbjct: 175 -------------TMPDANPQD-----DIRGIGASLYALLVNRWPLPEAGVRSGLAPAER 216
Query: 311 GGVDFESEPWLL---ISDSAKDLVRKMLIQDPKKRITSAEV 348
EP + I + + + D R S +
Sbjct: 217 DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 4e-23
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 450 NGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508
+ E + + +E + +AF+ DKD +GYI+ EL M + G +
Sbjct: 7 HHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEE 66
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 67 VDEMIREADIDGDGQVNYEEFVQMMTA 93
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-15
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA 444
++ + SEEEI+ + D D +G I+ EL+ + LG KL++ EV +++
Sbjct: 17 YFQSLMKDTDSEEEIREAFRVE---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 73
Query: 445 ADVDGNGTIDYIEFI 459
AD+DG+G ++Y EF+
Sbjct: 74 ADIDGDGQVNYEEFV 88
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 6e-23
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 16/125 (12%)
Query: 374 KQFRAMNKLKKMALKVIAEA-----------LSEEEIKGLKTMFANMDTDKSGTITYEEL 422
K F + ++ L I E++ K + D + G I L
Sbjct: 13 KAFGILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSL 72
Query: 423 KTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482
K + +LG + E+K+++ + TI Y +F+ M R + K F+
Sbjct: 73 KRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFV-NMMLGKRSA----VLKLVMMFE 127
Query: 483 KDNSG 487
+
Sbjct: 128 GKANE 132
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 84.1 bits (208), Expect = 2e-19
Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 7/105 (6%)
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
+ + ++ + + + Y + + E+ + + FD +N G I
Sbjct: 15 FGILKARQERRLAEINREFLCDQKYSDEENLP------EKLTAFKEKYMEFDLNNEGEID 68
Query: 491 RDELETAMKDYGIGD-EASIKEIISEVDTDNDGRINYEEFCTMMR 534
L+ M+ G+ +K++ISEV I+Y +F MM
Sbjct: 69 LMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMML 113
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 7e-23
Identities = 71/377 (18%), Positives = 124/377 (32%), Gaps = 125/377 (33%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-QDREDIK---REIQ 146
+ Y + +GRG +G YL + +T + A K K+ +D D K REI
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK-----KVNRMFEDLIDCKRILREIT 77
Query: 147 IMQHLSGQQNIVEFR-----GAYEDRQSVHLVMELC---------SGGELFDK----IIA 188
I+ L I+ +++V+E+ + L ++ I+
Sbjct: 78 ILNRLK-SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILY 136
Query: 189 QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
L + H G++HRDLKP N LL N+D +K DFGL+ I
Sbjct: 137 N----------LLLGE----NFIHESGIIHRDLKPANCLL-NQDC--SVKVCDFGLARTI 179
Query: 249 DEGKVYRDIVGSA-----------------------YYVAPEVL--RRSYGKEIDVWSAG 283
+ K + +Y APE++ + +Y K ID+WS G
Sbjct: 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239
Query: 284 VILYILLSGVPPFWAETE--KGIF------------DAILKGGVDF-------------- 315
I LL+ + + +F ++
Sbjct: 240 CIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP 299
Query: 316 -ESEPWLLISDSAKDLVR--------------------------KMLIQDPKKRITSAEV 348
E + + ++ ML +P KRIT +
Sbjct: 300 TEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQA 359
Query: 349 LEHPWMREGGEASDKPI 365
L+HP++++ + +
Sbjct: 360 LDHPYLKDVRKKKLENF 376
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 2e-22
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEAS-------IKEIISEVDTDND 521
+ L AF+ D + GY+T EL+T M S ++I D ++D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 522 GRINYEEFCTMMR 534
G+I+ EEF
Sbjct: 64 GKISKEEFLNANA 76
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 5e-13
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS------ETEVKQLMDAADV 447
++ + L+ F +D + G +T EL+T + L + + + +L+ AD
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 448 DGNGTIDYIEFIS 460
+ +G I EF++
Sbjct: 61 NSDGKISKEEFLN 73
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 7e-22
Identities = 64/327 (19%), Positives = 111/327 (33%), Gaps = 59/327 (18%)
Query: 66 QPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACK 125
+S + L + RG+FG + A K
Sbjct: 2 GHHHHHHSSGVDLGTENLYF-----QSMPL-QLLEVKARGRFGCVWKAQLL--NEYVAVK 53
Query: 126 SILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH----LVMELCSGGE 181
I + E E+ + + +NI++F GA + SV L+ G
Sbjct: 54 -IFPIQDKQSWQNE---YEVYSLPGMK-HENILQFIGAEKRGTSVDVDLWLITAFHEKGS 108
Query: 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM----------GVMHRDLKPENFLLSNK 231
L D + + + + + + H + HRD+K +N LL
Sbjct: 109 LSD-FLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL-KN 166
Query: 232 DGGAMLKATDFGLSVFIDEGKVYRDI---VGSAYYVAPEVLR------RSYGKEIDVWSA 282
+ A DFGL++ + GK D VG+ Y+APEVL R ID+++
Sbjct: 167 NLTA--CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAM 224
Query: 283 GVILYILLSG-----------VPPFWAET-EKGIFDAILKGGVDFESEPWLLISDSAKDL 330
G++L+ L S + PF E + + + + V + P L
Sbjct: 225 GLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAG 284
Query: 331 VRKM--LI-----QDPKKRITSAEVLE 350
+ + I D + R+++ V E
Sbjct: 285 MAMLCETIEECWDHDAEARLSAGCVGE 311
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 9e-22
Identities = 28/161 (17%), Positives = 65/161 (40%), Gaps = 22/161 (13%)
Query: 394 LSEEEIKGLKTMF--------ANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
L+++EI F ++++ + +E++ + + E + ++ +
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKE-RICRVFSTS 72
Query: 446 DVDGNGTIDYIEFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKD-YGI 503
++ + +F+ ++ D + AF+ FD D+ G + R++L + G
Sbjct: 73 P--AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGE 130
Query: 504 GDEASIKE---------IISEVDTDNDGRINYEEFCTMMRS 535
G++ + I+ E D D DG IN EF ++
Sbjct: 131 GEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 9e-22
Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 34/258 (13%)
Query: 69 KSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSIL 128
KS R V K + VL ED+ LG+++GRG FG + + A KS
Sbjct: 95 KSGVVLHRAVPKDKWVL--NHEDL----VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC- 147
Query: 129 KRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD---- 184
R+ + + +E +I++ S NIV G +Q +++VMEL GG+
Sbjct: 148 -RETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT 205
Query: 185 -----KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239
++ AAA + + +HRDL N L++ K+ +LK
Sbjct: 206 EGARLRVKTLLQMVGDAAAGME--------YLESKCCIHRDLAARNCLVTEKN---VLKI 254
Query: 240 TDFGLSVFIDEGKVYRDIVGSAYYV---APEVLR-RSYGKEIDVWSAGVILY-ILLSGVP 294
+DFG+S +G V APE L Y E DVWS G++L+ G
Sbjct: 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS 314
Query: 295 PFWAETEKGIFDAILKGG 312
P+ + + + + KGG
Sbjct: 315 PYPNLSNQQTREFVEKGG 332
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 95.7 bits (238), Expect = 1e-21
Identities = 61/365 (16%), Positives = 116/365 (31%), Gaps = 112/365 (30%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--- 152
Y + ++LG G F +L + A K ++K + E EI++++ +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMK-VVKS---AEHYTETALDEIRLLKSVRNSD 94
Query: 153 ----GQQNIVEFRGAYEDR--QSVH--LVMELCSGGELFDKIIAQGH--YTEKAAAALCR 202
++ +V+ ++ H +V E+ G L II + + +
Sbjct: 95 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQ 153
Query: 203 AIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAM------------------------- 236
++ + + H ++H D+KPEN LLS +
Sbjct: 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 213
Query: 237 ---------------------LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYG 274
+K D G + ++ + + + + + Y + EV + Y
Sbjct: 214 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIGSGYN 271
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFD---------AIL------------KGGV 313
D+WS + + L +G F + + +L
Sbjct: 272 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKE 331
Query: 314 DFESE----------PWLLIS-------------DSAKDLVRKMLIQDPKKRITSAEVLE 350
F + PW L D + ML P+KR T+AE L
Sbjct: 332 FFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391
Query: 351 HPWMR 355
HPW+
Sbjct: 392 HPWLN 396
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 2e-21
Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
Query: 430 GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
G K Q + + +D ++ + + E + FD + +G I
Sbjct: 9 GGKAFGLLKAQQEERLEGINKQFLDDPKYSNDEDLP---SKLEAFKVKYMEFDLNGNGDI 65
Query: 490 TRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAKLI 544
L+ ++ G+ +K +I EV + ++ +Y +F MM ++I
Sbjct: 66 DIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMI 121
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 5e-21
Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 372 RMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS 431
+ ++ +NK K + +++ K + D + +G I LK L +LG
Sbjct: 20 QEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV 79
Query: 432 KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSG 487
+ E+K+L+ T Y +F + +R L + +++ N
Sbjct: 80 PKTHLELKRLIREVSSGSEETFSYSDF----LRMMLGKRSAIL-RMILMYEEKNKE 130
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 89.3 bits (221), Expect = 3e-21
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 24/116 (20%)
Query: 420 EELKTGLARLGSKLSETEVK-QLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478
E L+ + + +++S E++ D DGN +D +E +A H ++ E E
Sbjct: 51 EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSE------ 104
Query: 479 QYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ ++ DEL I ++ + D +NDG I+Y EF ++
Sbjct: 105 ------QAPLMSEDELINI-----------IDGVLRDDDKNNDGYIDYAEFAKSLQ 143
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 7e-21
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 378 AMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
+M + A LSEE I K F D D G I+ +EL T + LG ++ E
Sbjct: 2 SMTDQQAEARAF----LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHR 465
+ +++ D DG+GTID+ EF+ M R
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVM-MVR 84
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 9e-19
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 461 ATMHRYRLERDEHL-------YK-AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE 511
A+M + E L +K AF FD D G I+ EL T M+ G + +
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDA 60
Query: 512 IISEVDTDNDGRINYEEFCTMM 533
II EVD D G I++EEF MM
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMM 82
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 2e-20
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTM 532
+ F+ FDK+ G ++ DE + + I + E+D D +G +N +EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 533 MRS 535
+
Sbjct: 63 IEK 65
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 83.7 bits (208), Expect = 3e-20
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
K +F D +K G ++ +E + ++ ++ + + DVDGNG ++ EF S
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 462 TMHR 465
+ +
Sbjct: 63 -IEK 65
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 2e-20
Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 381 KLKKMALKVIAEA--LSEEEIKGLKTMF--------ANMDTDKSGTITYEELKTGLARLG 430
+L K L + L+++EI F ++++ + +E++ +
Sbjct: 30 RLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA 89
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE--RDEHLYKAFQYFDKDNSGY 488
+ E + ++ + ++ + +F+ + + D + AF+ FD D+ G
Sbjct: 90 NPFKE-RICRVFSTSP--AKDSLSFEDFLDL-LSVFSDTATPDIKSHYAFRIFDFDDDGT 145
Query: 489 ITRDELETAMKD-YGIGDEASIKE---------IISEVDTDNDGRINYEEFCTMM 533
+ R++L + G G++ + I+ E D D DG IN EF ++
Sbjct: 146 LNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 200
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 5e-05
Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 11/106 (10%)
Query: 405 MFANMDTDKS-GTITYEELKTGLARLGSKLSETEVKQLM-DAADVDGNGTIDYIEF---- 458
+ T + ++++E+ L+ + D D +GT++ +
Sbjct: 96 ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLV 155
Query: 459 --ISATMHRYRL---ERDEHLYKAFQYFDKDNSGYITRDELETAMK 499
++ RL E + + + D D G I E + +
Sbjct: 156 NCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 201
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 4e-20
Identities = 66/318 (20%), Positives = 112/318 (35%), Gaps = 75/318 (23%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI--- 147
D+ L + +GRG++G Y + + A K + +R++ E I
Sbjct: 11 DLDNL-KLLELIGRGRYGAVYKGSLD--ERPVAVK-VFS-----FANRQNFINEKNIYRV 61
Query: 148 --MQHLSGQQNIVEFRGAYEDRQSVH-----LVMELCSGGELFDKIIAQGHYTEKAAAAL 200
M+H NI F E + LVME G L ++ ++ L
Sbjct: 62 PLMEH----DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRL 116
Query: 201 CRAIVNVVHHCHFM---------GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
++ + + H + HRDL N +L DG +DFGLS+ +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN-VLVKNDGTC--VISDFGLSMRLTGN 173
Query: 252 KVYRD---------IVGSAYYVAPEVLR--------RSYGKEIDVWSAGVILYILLSGV- 293
++ R VG+ Y+APEVL S K++D+++ G+I + +
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 294 ------------PPFWAETEKGIFDAILKGGVDFE------SEPWLLISDSAKDLVRKML 335
F E ++ V E E W S + + L +
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293
Query: 336 I---QDPKKRITSAEVLE 350
QD + R+T+ E
Sbjct: 294 DCWDQDAEARLTAQXAEE 311
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 1e-19
Identities = 66/303 (21%), Positives = 116/303 (38%), Gaps = 47/303 (15%)
Query: 38 YQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQ-KPETVLGKPLEDIRQFY 96
+Q + Q + K+ P A T + E P ++I
Sbjct: 22 FQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEV----PRKNI---- 73
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIKREIQIMQHL 151
TL + LG G FG Y + N A K++ ++ ++QD D E I+
Sbjct: 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKF 131
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH- 210
+ QNIV G +++EL +GG+L + + ++ +++V
Sbjct: 132 N-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 211 ---CHFMGVM---HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
C ++ HRD+ N LL+ G + K DFG++ RDI + YY
Sbjct: 191 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRAGYYR 241
Query: 265 ------------APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILK 310
PE + + D WS GV+L+ + S G P+ +++ + + + +
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 301
Query: 311 GGV 313
GG
Sbjct: 302 GGR 304
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-19
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 468 LERDEHLYKAFQYFDKD--NSGYITRDELETAMKDYG---IGDEASIKEIISEVDTDNDG 522
++ E + AF+ F + I+++EL+ M+ G + +++ E+I EVD + DG
Sbjct: 1 MKSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 523 RINYEEFCTMMRSGT 537
+++EEF MM+ +
Sbjct: 61 EVSFEEFLVMMKKIS 75
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-12
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET--EVKQLMDAADVDGNGT 452
S EEIKG +FA + I+ EELK + LG L + + ++++ D +G+G
Sbjct: 3 SPEEIKGAFEVFAAKE-GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 453 IDYIEFI 459
+ + EF+
Sbjct: 62 VSFEEFL 68
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 5e-19
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 43/240 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG+++G G FG YL T+ + G A K + K + Q + E +I + + G
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQ----LHIESKIYKMMQGGV 65
Query: 156 NIVEFRGAYEDRQSVHLVMELC--SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
I R + +VMEL S +LF+ ++ K L +++ + + H
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS 123
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--------------IVG 259
+HRD+KP+NFL+ G ++ DFGL+ K YRD + G
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA------KKYRDARTHQHIPYRENKNLTG 177
Query: 260 SAYYVAPEVLRRSYGKEI----DVWSAG-VILYILLSGVPPFW----AETEKGIFDAILK 310
+A Y + + G E D+ S G V++Y L +P W A T++ ++ I +
Sbjct: 178 TARYAS---INTHLGIEQSRRDDLESLGYVLMYFNLGSLP--WQGLKAATKRQKYERISE 232
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 5e-19
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 17/225 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLS 152
K LG G FG Y G A K + R+ + + ++I E +M +
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASVD 75
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHC 211
++ G +V L+ +L G L D + + + + C I +++
Sbjct: 76 -NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---APEV 268
++HRDL N L+ +K TDFGL+ + + G + A E
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ R Y + DVWS GV ++ L++ G P+ I + KG
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 40/237 (16%), Positives = 72/237 (30%), Gaps = 33/237 (13%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSI---LKR-KLVNKQDREDIKREIQIMQHLS 152
+ LG+G F + G+ LK ++ E +M LS
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+++V G LV E G L + + + + H
Sbjct: 71 -HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMH 127
Query: 213 F---MGVMHRDLKPENFLLSNKDGGA-----MLKATDFGLSVFIDEGKVYRDIVGSAYY- 263
F ++H ++ +N LL ++ +K +D G+S ++
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---------ITVLPKDILQ 178
Query: 264 -----VAPEVL--RRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
V PE + ++ D WS G L+ + S G P A +
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 2e-18
Identities = 65/309 (21%), Positives = 112/309 (36%), Gaps = 40/309 (12%)
Query: 21 STAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQK 80
+T + + + ++ V+ +S + + + T T P +
Sbjct: 324 ATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTR 383
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQD 137
+ E I LG+ +G GQFG + + + + A K+ + +
Sbjct: 384 DYEI---QRERI----ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--KNCTSDSV 434
Query: 138 REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKA 196
RE +E M+ +IV+ G V ++MELC+ GEL + + +
Sbjct: 435 REKFLQEALTMRQFD-HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
+ + + +HRD+ N L+S+ D +K DFGLS R
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS---------RY 540
Query: 257 IVGSAYYV-----------APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
+ S YY APE + R + DVW GV ++ +L GV PF
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
Query: 304 IFDAILKGG 312
+ I G
Sbjct: 601 VIGRIENGE 609
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 43/249 (17%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQ 149
Q +TLG+ LG+G+FG S+ A K LK ++ D E+ RE M+
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKM-LKADIIASSDIEEFLREAACMK 80
Query: 150 HLSGQQNIVEFRGA------YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA 203
++ + G +++ G+L ++A L
Sbjct: 81 EFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 204 I---VNVVHHCHFMGVM---HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
+ V++ ++ HRDL N +L+ + DFGLS R I
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM---TVCVADFGLS---------RKI 187
Query: 258 VGSAYYV------------APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
YY A E L Y DVW+ GV ++ +++ G P+
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 304 IFDAILKGG 312
I++ ++ G
Sbjct: 248 IYNYLIGGN 256
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 2e-18
Identities = 46/220 (20%), Positives = 83/220 (37%), Gaps = 34/220 (15%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDI-RQFYTLGKELGRGQFGITYLCT 114
M + + + + PE GK L+D+ + LGK++G G FG+ YL
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMPFPE---GKVLDDMEGNQWVLGKKIGSGGFGLIYLAF 57
Query: 115 ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR------------- 161
+ A + K V Q+ + E++ Q ++ + I ++
Sbjct: 58 PTNKPEKDARHVV---K-VEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113
Query: 162 ---GAYEDRQSVH--LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGV 216
G E + + +VME G +L G + + L +++V+ + H
Sbjct: 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEY 172
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
+H D+K N LL K+ + D+GLS Y
Sbjct: 173 VHGDIKAANLLLGYKNPD-QVYLADYGLS------YRYCP 205
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 3e-18
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 40/234 (17%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + + A K+ ++ ED E ++M LS
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNK-DKVAIKT-IR---EGAMSEEDFIEEAEVMMKLS-HPK 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF--- 213
+V+ G ++ + LV E G L D + + AA L ++V +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV--------- 264
V+HRDL N L+ ++K +DFG++ R ++ Y
Sbjct: 123 ACVIHRDLAARNCLVGENQ---VIKVSDFGMT---------RFVLDDQYTSSTGTKFPVK 170
Query: 265 --APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+PEV + + + DVWS GV+++ + S G P+ + + + I G
Sbjct: 171 WASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 86.6 bits (214), Expect = 3e-18
Identities = 64/239 (26%), Positives = 94/239 (39%), Gaps = 41/239 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ LG+++G G FG YL T T A K K + E +I + L G
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-----KTKHPQLLYESKIYRILQGGT 63
Query: 156 NIVEFRGAYEDRQSVHLVMELC--SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
I R + LVM+L S +LF+ + K L ++N V H
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS 121
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--------------IVG 259
+HRD+KP+NFL+ + DFGL+ K YRD + G
Sbjct: 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA------KKYRDTSTHQHIPYRENKNLTG 175
Query: 260 SAYYVAPEVLRRSYGKEI----DVWSAGVILYILLSGVPPFW----AETEKGIFDAILK 310
+A Y + + G E D+ S G +L L G P W A T+K ++ I +
Sbjct: 176 TARYAS---VNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQKYEKISE 230
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 86.9 bits (215), Expect = 3e-18
Identities = 77/316 (24%), Positives = 118/316 (37%), Gaps = 22/316 (6%)
Query: 9 RVPPSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPM 68
+ + + +S A + +T T Q + P +PR PM
Sbjct: 251 KEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPM 310
Query: 69 KSSATSTRPVQKPETVLGKPLEDIRQFYTLGK-ELGRGQFGITYLCTENSTGNSY--ACK 125
+S + P PE + K L R + ELG G FG A K
Sbjct: 311 DTSVFES-PFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIK 369
Query: 126 SILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDK 185
+ ++ K D E++ RE QIM L IV G + +++ LVME+ GG L
Sbjct: 370 VL--KQGTEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKF 425
Query: 186 IIAQGHYTEKAAAALCRAIVNVVHHCHF---MGVMHRDLKPENFLLSNKDGGAMLKATDF 242
+ G E + + + V + +HR+L N LL N+ K +DF
Sbjct: 426 L--VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH---YAKISDF 480
Query: 243 GLSVFIDEGK-VYRDIVGSAYYV---APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPF 296
GLS + Y + + APE + R + DVWS GV ++ LS G P+
Sbjct: 481 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540
Query: 297 WAETEKGIFDAILKGG 312
+ I +G
Sbjct: 541 KKMKGPEVMAFIEQGK 556
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 3e-18
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 46/254 (18%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIK 142
P ++I TL + LG G FG Y + N A K++ ++ ++QD D
Sbjct: 28 PRKNI----TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFL 81
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR 202
E I+ + QNIV G ++MEL +GG+L + + ++
Sbjct: 82 MEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 203 AIVNVVHH----CHFMGVM---HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR 255
+++V C ++ HRD+ N LL+ G + K DFG++ R
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------R 191
Query: 256 DIVGSAYYV------------APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAE 299
DI ++YY PE G + D WS GV+L+ + S G P+ ++
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFM--EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
Query: 300 TEKGIFDAILKGGV 313
+ + + + + GG
Sbjct: 250 SNQEVLEFVTSGGR 263
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 3e-18
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 16/227 (7%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R T+ +LG GQ+G Y + A K+ LK + + E+ +E +M+ +
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-LKE---DTMEVEEFLKEAAVMKEIK 274
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL--CRAIVNVVHH 210
N+V+ G +++ E + G L D + A L I + + +
Sbjct: 275 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---APE 267
+HR+L N L+ ++K DFGLS + G Y G+ + + APE
Sbjct: 334 LEKKNFIHRNLAARNCLVGENH---LVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 389
Query: 268 VLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
L + + DVW+ GV+L+ + + G+ P+ +++ + K
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 436
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 3e-18
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKR 143
P ++F ++LG G FG LC + G++ A KS LK + D+K+
Sbjct: 15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS-LKPE-SGGNHIADLKK 72
Query: 144 EIQIMQHLSGQQNIVEFRGA--YEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAAL 200
EI+I+++L +NIV+++G + + L+ME G L + + + K
Sbjct: 73 EIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
I + + +HRDL N L+ ++ +K DFGL+ I+ K Y
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDKEY------ 182
Query: 261 AYYV-----------APEVLR-RSYGKEIDVWSAGVILYILLS 291
Y V APE L + DVWS GV L+ LL+
Sbjct: 183 -YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 4e-18
Identities = 69/308 (22%), Positives = 115/308 (37%), Gaps = 54/308 (17%)
Query: 45 QQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDI----RQFYTLGK 100
Q M++ P R SS T+ P+ + P + R TLGK
Sbjct: 29 QVTVSAESSSSMNSNTPLVRITTRLSS-TADTPMLAGVSEYELPEDPKWEFPRDKLTLGK 87
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSI------LKRKLVNKQDREDIKREIQIMQHLSGQ 154
LG G FG + +++ LK ++D D+ E+++M+ +
Sbjct: 88 PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKH 146
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+NI+ GA +++++E S G L + + A+ + + + R + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 215 GVM----------------HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
HRDL N L++ + M K DFGL+ RDI
Sbjct: 207 SCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVM-KIADFGLA---------RDIN 254
Query: 259 GSAYYV------------APEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGI 304
YY APE L R Y + DVWS GV+++ I G P+ + +
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
Query: 305 FDAILKGG 312
F + +G
Sbjct: 315 FKLLKEGH 322
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 6e-18
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 43/241 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +G+ +G G FG+ + T A K + D ++ E + + L+G
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-----FEPRRSDAPQLRDEYRTYKLLAGCT 66
Query: 156 NIVEFRGAYEDRQSVHLVMELC--SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
I ++ LV++L S +L D ++ K A + ++ V H
Sbjct: 67 GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHE 124
Query: 214 MGVMHRDLKPENFLLSNKDG--GAMLKATDFGLSVFIDEGKVYRD--------------I 257
+++RD+KP+NFL+ + M+ DFG+ K YRD +
Sbjct: 125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV------KFYRDPVTKQHIPYREKKNL 178
Query: 258 VGSAYYVAPEVLRRSYGKEI----DVWSAGVILYILLSGVPPFW----AETEKGIFDAIL 309
G+A Y++ + G+E D+ + G + L G P W A T K ++ I
Sbjct: 179 SGTARYMS---INTHLGREQSRRDDLEALGHVFMYFLRGSLP-WQGLKAATNKQKYERIG 234
Query: 310 K 310
+
Sbjct: 235 E 235
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 6e-18
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 37/253 (14%)
Query: 62 QPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFY----TLGKELGRGQFGITYLCTENS 117
T+ + D QF ++LG+G FG +C +
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDP 64
Query: 118 TGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA--YEDRQSVH 171
++ A K + + ++ D +REI+I++ L NIV+++G R+++
Sbjct: 65 LQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLK 120
Query: 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
L+ME G L D + + I + + +HRDL N L+ N
Sbjct: 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 180
Query: 231 KDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV-----------APEVLR-RSYGKEID 278
++ +K DFGL+ + + K Y Y V APE L + D
Sbjct: 181 EN---RVKIGDFGLTKVLPQDKEY-------YKVKEPGESPIFWYAPESLTESKFSVASD 230
Query: 279 VWSAGVILYILLS 291
VWS GV+LY L +
Sbjct: 231 VWSFGVVLYELFT 243
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 7e-18
Identities = 59/273 (21%), Positives = 101/273 (36%), Gaps = 45/273 (16%)
Query: 71 SATSTRPVQKPETVLGKPLEDI---RQFYTLGKELGRGQFGITYLCTENSTGNSY---AC 124
S+ V + L LED+ R LGK LG G+FG + A
Sbjct: 8 HHHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAV 67
Query: 125 KSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH-----LVMELCSG 179
K+ +K ++++ E+ E M+ S N++ G + S +++
Sbjct: 68 KT-MKLDNSSQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFMKY 125
Query: 180 GELFDKIIAQGHYTEKAAAALCRAI---VNVVHHCHF---MGVMHRDLKPENFLLSNKDG 233
G+L ++ T L + V++ + +HRDL N +L +
Sbjct: 126 GDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD--- 182
Query: 234 GAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------APEVLR-RSYGKEIDVW 280
+ DFGLS + I YY A E L R Y + DVW
Sbjct: 183 DMTVCVADFGLS---------KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW 233
Query: 281 SAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ GV ++ + + G+ P+ ++D +L G
Sbjct: 234 AFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 8e-18
Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 97 TLGKELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
L + LG G FG Y + A K+ +K ++E E IM++L
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKNLD- 71
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+IV+ G E + ++MEL GEL + + + L + + +
Sbjct: 72 HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 214 ---MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------ 264
+ +HRD+ N L+++ + +K DFGLS R I YY
Sbjct: 129 LESINCVHRDIAVRNILVASPE---CVKLGDFGLS---------RYIEDEDYYKASVTRL 176
Query: 265 -----APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+PE + + + DVW V ++ +LS G PF+ K + + KG
Sbjct: 177 PIKWMSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 8e-18
Identities = 61/241 (25%), Positives = 93/241 (38%), Gaps = 34/241 (14%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIM 148
+ +LG+G FG LC + G++ A K + + + D +REIQI+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQIL 78
Query: 149 QHLSGQQNIVEFRG--AYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIV 205
+ L IV++RG RQS+ LVME G L D + + I
Sbjct: 79 KALH-SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV- 264
+ + +HRDL N L+ ++ +K DFGL+ + K Y Y V
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEA---HVKIADFGLAKLLPLDKDY-------YVVR 187
Query: 265 ----------APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
APE L + ++ DVWS GV+LY L + E +
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV 247
Query: 313 V 313
Sbjct: 248 P 248
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 9e-18
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 16/223 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+ +LG GQ+G Y + A K+ LK + + E+ +E +M+ + N
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-LK---EDTMEVEEFLKEAAVMKEIK-HPN 70
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFD--KIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+V+ G +++ E + G L D + + + + I + + +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---APEVLR- 270
+HRDL N L+ ++K DFGLS + Y G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVGENH---LVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAY 186
Query: 271 RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ + DVW+ GV+L+ + + G+ P+ +++ + K
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 9e-18
Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 36/241 (14%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQ 149
+ +GRG FG Y T A KS L ++ + + E IM+
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LN-RITDIGEVSQFLTEGIIMK 81
Query: 150 HLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNV 207
S N++ G S +V+ G+L + I + H T K +
Sbjct: 82 DFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV--- 264
+ + +HRDL N +L K +K DFGL+ RD+ YY
Sbjct: 141 MKYLASKKFVHRDLAARNCMLDEKF---TVKVADFGLA---------RDMYDKEYYSVHN 188
Query: 265 -----------APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
A E L+ + + + DVWS GV+L+ L++ G PP+ I +L+G
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
Query: 312 G 312
Sbjct: 249 R 249
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 59/326 (18%), Positives = 102/326 (31%), Gaps = 40/326 (12%)
Query: 12 PSDMNGYRSSTAHSSHQATGVATQTPYQTYQQQQQQQLHVQPPKMSAPQPQPRQQPMKSS 71
P D G+ + P + + + ++
Sbjct: 3 PIDPMGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGAN 62
Query: 72 ATSTRPVQKPETVLGKP----LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY---AC 124
++ + + +GRG FG Y T A
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122
Query: 125 KSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELF 183
KS L ++ + + E IM+ S N++ G S +V+ G+L
Sbjct: 123 KS-LN-RITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 184 DKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
+ I + T K + + +HRDL N +L K +K DF
Sbjct: 180 NFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF---TVKVADF 236
Query: 243 GLSVFIDEGKVYRDIVGSAYYV--------------APEVLR-RSYGKEIDVWSAGVILY 287
GL+ RD+ + A E L+ + + + DVWS GV+L+
Sbjct: 237 GLA---------RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 287
Query: 288 ILLS-GVPPFWAETEKGIFDAILKGG 312
L++ G PP+ I +L+G
Sbjct: 288 ELMTRGAPPYPDVNTFDITVYLLQGR 313
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 1e-17
Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 38/220 (17%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIM 148
+++ ++LG G FG L + T + A K+ LK Q R K+EI I+
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA-LKAD-AGPQHRSGWKQEIDIL 87
Query: 149 QHLSGQQNIVEFRGA--YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
+ L ++I++++G S+ LVME G L D + H A L
Sbjct: 88 RTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRH--SIGLAQLLLFAQQ 142
Query: 207 VVHHCHFMGVM---HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ ++ HRDL N LL N ++K DFGL+ + EG Y Y
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDR---LVKIGDFGLAKAVPEGHEY-------YR 192
Query: 264 V-----------APEVLR-RSYGKEIDVWSAGVILYILLS 291
V APE L+ + DVWS GV LY LL+
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 1e-17
Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSI----LKRKLVNKQDREDIKREIQIMQHLS 152
GK LG G FG T G A + LK + ++E + E++IM HL
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSELKIMSHLG 107
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFD------KIIAQGHYTEKAAAAL------ 200
+NIV GA V ++ E C G+L + +++ A +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 201 --CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
+ + +HRD+ N LL+N G + K DFGL+ RDI+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIM 215
Query: 259 GSAYYV------------APEVLR-RSYGKEIDVWSAGVILY 287
+ Y+ APE + Y + DVWS G++L+
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-17
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ A K +K ++ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKM-IK---EGSMSEDEFIEEAKVMMNLS-HEK 80
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF--- 213
+V+ G ++ + ++ E + G L + + + L +V +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV--------- 264
+HRDL N L++++ ++K +DFGLS R ++ Y
Sbjct: 139 KQFLHRDLAARNCLVNDQG---VVKVSDFGLS---------RYVLDDEYTSSVGSKFPVR 186
Query: 265 --APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
PEVL Y K + D+W+ GV+++ + S G P+ T + I +G
Sbjct: 187 WSPPEVLM--YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-17
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 17/225 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLS 152
K LG G FG Y G A K + R+ + + ++I E +M +
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASVD 75
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHC 211
++ G +V L+ +L G L D + + + + C I +++
Sbjct: 76 -NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---APEV 268
++HRDL N L+ +K TDFGL+ + + G + A E
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ R Y + DVWS GV ++ L++ G P+ I + KG
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-17
Identities = 48/225 (21%), Positives = 83/225 (36%), Gaps = 17/225 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLS 152
K LG G FG + G S K I +Q + + + + L
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLD 73
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHC 211
+IV G S+ LV + G L D + +G + I +++
Sbjct: 74 -HAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---APEV 268
G++HR+L N LL + ++ DFG++ + + + A E
Sbjct: 132 EEHGMVHRNLAARNVLLKSPS---QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ Y + DVWS GV ++ L++ G P+ + D + KG
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG 233
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIM 148
+ ++LG+G FG +C + ++ A K + + ++ D +REI+I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEIL 65
Query: 149 QHLSGQQNIVEFRGA--YEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIV 205
+ L NIV+++G R+++ L+ME G L D + + I
Sbjct: 66 KSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV- 264
+ + +HRDL N L+ N++ +K DFGL+ + + K + + V
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEF-------FKVK 174
Query: 265 ----------APEVLR-RSYGKEIDVWSAGVILYILLS 291
APE L + DVWS GV+LY L +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 52/257 (20%), Positives = 97/257 (37%), Gaps = 52/257 (20%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIK 142
E I T+ +ELG+G FG+ Y A K++ + + ++R +
Sbjct: 23 AREKI----TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFL 76
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR 202
E +M+ ++V G Q ++MEL + G+L + +
Sbjct: 77 NEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 203 AIVNVVHHCH----------FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
++ ++ +HRDL N +++ +K DFG++
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMT------- 185
Query: 253 VYRDIVGSAYYV------------APEVLRRSYGK---EIDVWSAGVILY-ILLSGVPPF 296
RDI + YY +PE L+ G DVWS GV+L+ I P+
Sbjct: 186 --RDIYETDYYRKGGKGLLPVRWMSPESLK--DGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Query: 297 WAETEKGIFDAILKGGV 313
+ + + +++GG+
Sbjct: 242 QGLSNEQVLRFVMEGGL 258
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 53/261 (20%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI------LKRKLVNKQDREDI 141
P + + TLGK LG G FG + +++ LK ++D D+
Sbjct: 33 PRDKL----TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDL 87
Query: 142 KREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALC 201
E+++M+ + +NI+ GA +++++E S G L + + A+ + + +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 202 RAIVNVVHHCHF----------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
R + +HRDL N L++ ++K DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE---NNVMKIADFGLA 204
Query: 246 VFIDEGKVYRDIVGSAYYV------------APEVLR-RSYGKEIDVWSAGVILY-ILLS 291
RDI YY APE L R Y + DVWS GV+++ I
Sbjct: 205 ---------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 292 GVPPFWAETEKGIFDAILKGG 312
G P+ + +F + +G
Sbjct: 256 GGSPYPGIPVEELFKLLKEGH 276
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 54/227 (23%), Positives = 83/227 (36%), Gaps = 50/227 (22%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIKREIQIMQHL 151
+ GK LG G FG T S A K + + + +RE + E++++ +L
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLSYL 83
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGEL-----------FDKIIAQGHYTEKAAAAL 200
NIV GA ++ E C G+L + + A
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 201 CRAIVNVVH-------HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
+++ + +HRDL N LL++ G + K DFGL+
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GRITKICDFGLA-------- 192
Query: 254 YRDIVGSAYYV------------APEVLR-RSYGKEIDVWSAGVILY 287
RDI + YV APE + Y E DVWS G+ L+
Sbjct: 193 -RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 59/286 (20%), Positives = 101/286 (35%), Gaps = 31/286 (10%)
Query: 41 YQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGK 100
+ + P+PQ +P T P + E + K
Sbjct: 3 HHHHHSSGRENLYFQGKLPEPQFYAEP----HTYEEPGR---AGRSFTREIEASRIHIEK 55
Query: 101 ELGRGQFGITYLCTENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
+G G G G A K++ + ++ R D E IM NI
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMGQFD-HPNI 112
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF---M 214
+ G + +V E G L + + H + L + V + +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYV---APEVLR 270
G +HRDL N L+ + + K +DFGLS + D+ G + APE +
Sbjct: 171 GYVHRDLAARNVLVDSNL---VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 271 RSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ DVWS GV+++ +L+ G P+W T + + ++ +G
Sbjct: 228 --FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 4e-17
Identities = 58/239 (24%), Positives = 92/239 (38%), Gaps = 50/239 (20%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
TL KELG GQFG+ L A K +K ++ +E Q M LS
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQ-YDVAVKM-IK---EGSMSEDEFFQEAQTMMKLS-HPK 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA-----AAALCRAIVNVVHHC 211
+V+F G +++V E S G L + + + G E + +C
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG-------M 117
Query: 212 HF---MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---- 264
F +HRDL N L+ +K +DFG++ R ++ Y
Sbjct: 118 AFLESHQFIHRDLAARNCLVDRDL---CVKVSDFGMT---------RYVLDDQYVSSVGT 165
Query: 265 -------APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
APEV Y K + DVW+ G++++ + S G P+ T + + +G
Sbjct: 166 KFPVKWSAPEVFH--YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 5e-17
Identities = 60/225 (26%), Positives = 89/225 (39%), Gaps = 18/225 (8%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSY--ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
KELG G FG A K LK + + ++++ E +MQ L
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKI-LKNEANDPALKDELLAEANVMQQLD-NP 78
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
IV G E +S LVME+ G L + H +K L + + +
Sbjct: 79 YIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYV---APEVLRR 271
+HRDL N LL + K +DFGLS + + Y+ + V APE +
Sbjct: 138 FVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN- 193
Query: 272 SYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
Y K + DVWS GV+++ S G P+ + + KG
Sbjct: 194 -YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 6e-17
Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 43/241 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +GK++G G FG L T A K + K Q + E + + L
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQ----LHLEYRFYKQLGSGD 65
Query: 156 NIVEFRGAYEDRQSVHLVMELC--SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
I + + +V+EL S +LFD ++ K + +++ + + H
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL--CDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 214 MGVMHRDLKPENFLLSNKDGGA--MLKATDFGLSVFIDEGKVYRD--------------I 257
+++RD+KPENFL+ ++ DF L+ K Y D +
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA------KEYIDPETKKHIPYREHKSL 177
Query: 258 VGSAYYVAPEVLRRSYGKEI----DVWSAGVILYILLSGVPPFW----AETEKGIFDAIL 309
G+A Y++ + GKE D+ + G + L G P W A+T K + I
Sbjct: 178 TGTARYMS---INTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQKIG 233
Query: 310 K 310
Sbjct: 234 D 234
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 8e-17
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 15/226 (6%)
Query: 97 TLGKELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
L ++LG G FG+ + S A K + L + +D RE+ M L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 79
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCH 212
+N++ G + +V EL G L D++ QGH+ + + + +
Sbjct: 80 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYRDIVGSAYYV---APEV 268
+HRDL N LL+ +D ++K DFGL + + Y APE
Sbjct: 139 SKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
L+ R++ D W GV L+ + + G P+ I I K G
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 241
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 8e-17
Identities = 60/291 (20%), Positives = 105/291 (36%), Gaps = 46/291 (15%)
Query: 41 YQQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGK 100
Y + + Q P ++ T + + T K
Sbjct: 4 YHHHHHHDYDIPTTENLYFQGAMGSDPNQAVLKFTTEI---------HPSCV----TRQK 50
Query: 101 ELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
+G G+FG Y ++ A K++ + ++ R D E IM S N
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMGQFS-HHN 107
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ G + + ++ E G L + G ++ + R I + + M
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV----------A 265
+HRDL N L+++ + K +DFGLS + D + Y A
Sbjct: 168 YVHRDLAARNILVNSNL---VCKVSDFGLSRVL------EDDPEATYTTSGGKIPIRWTA 218
Query: 266 PEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
PE + SY K DVWS G++++ +++ G P+W + + AI G
Sbjct: 219 PEAI--SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF 267
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 1e-16
Identities = 58/252 (23%), Positives = 94/252 (37%), Gaps = 49/252 (19%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSI------LKRKLVNKQDREDIKREIQIMQH 150
LGK LG G FG L + LK ++D D+ E+++M+
Sbjct: 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKM 130
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ +NI+ GA +++++E S G L + + A+ + + +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 211 CHF----------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
+HRDL N L++ ++K DFGL+
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA--------- 238
Query: 255 RDIVGSAYYV------------APEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAET 300
RDI YY APE L R Y + DVWS GV+L+ I G P+
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 301 EKGIFDAILKGG 312
+ +F + +G
Sbjct: 299 VEELFKLLKEGH 310
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 33/262 (12%)
Query: 73 TSTRPVQKPETVLGKPLEDIRQFY--------TLGKELGRGQFGITYLCTENSTGNSY-- 122
R P T P + + +F ++ K +G G+FG
Sbjct: 17 PGLRTFVDPHTF-EDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 123 -ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181
A K++ + ++ R D E IM NI+ G + V +V E G
Sbjct: 76 VAIKTL--KVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF---MGVMHRDLKPENFLLSNKDGGAMLK 238
L + + H + L + + + MG +HRDL N L+++ + K
Sbjct: 133 LDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---VCK 187
Query: 239 ATDFGLSVFI-DEGKVYRDIVGSAYYV---APEVLRRSYGK---EIDVWSAGVILYILLS 291
+DFGL + D+ + G + +PE + +Y K DVWS G++L+ ++S
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMS 245
Query: 292 -GVPPFWAETEKGIFDAILKGG 312
G P+W + + + A+ +G
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGY 267
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 2e-16
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 40/267 (14%)
Query: 61 PQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGN 120
+S T+ + K + P E + L +LG+G FG ++ T N T
Sbjct: 157 CHRLTTVCPTSKPQTQGLAKDAWEI--PRESL----RLEVKLGQGCFGEVWMGTWNGTTR 210
Query: 121 SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG 180
A K+ LK E +E Q+M+ L + +V+ + +++V E S G
Sbjct: 211 V-AIKT-LKP---GTMSPEAFLQEAQVMKKLR-HEKLVQLYAVV-SEEPIYIVTEYMSKG 263
Query: 181 ELFDKIIAQGHYTEKAAAAL--CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238
L D + + + + I + + + M +HRDL+ N L+ + K
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL---VCK 320
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAYYV-----------APEVLR-RSYGKEIDVWSAGVIL 286
DFGL+ R I + Y APE + + DVWS G++L
Sbjct: 321 VADFGLA---------RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 287 YILLS-GVPPFWAETEKGIFDAILKGG 312
L + G P+ + + D + +G
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVERGY 398
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 58/263 (22%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIK 142
L + +ELG +FG Y A K++ + RE+ +
Sbjct: 7 SLSAV----RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFR 60
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR 202
E + L N+V G Q + ++ CS G+L + ++ + +++ + R
Sbjct: 61 HEAMLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 203 AIVNVVHHCHFMGV-------M---------HRDLKPENFLLSNKDGGAMLKATDFGLSV 246
+ + + F+ + M H+DL N L+ +K +K +D GL
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL---NVKISDLGLF- 175
Query: 247 FIDEGKVYRDIVGSAYYV------------APEVLRRSYGK---EIDVWSAGVILYILLS 291
R++ + YY APE + YGK + D+WS GV+L+ + S
Sbjct: 176 --------REVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFS 225
Query: 292 -GVPPFWAETEKGIFDAILKGGV 313
G+ P+ + + + + I V
Sbjct: 226 YGLQPYCGYSNQDVVEMIRNRQV 248
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 97 TLGKELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
LG+ +G GQFG + + + + A K+ + + RE +E M+
Sbjct: 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMRQFD- 74
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+IV+ G V ++MELC+ GEL + Q A+L + +
Sbjct: 75 HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 131
Query: 214 ---MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------ 264
+HRD+ N L+S+ D +K DFGLS R + S YY
Sbjct: 132 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLS---------RYMEDSTYYKASKGKL 179
Query: 265 -----APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
APE + R + DVW GV ++ +L GV PF + I G
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 54/237 (22%), Positives = 91/237 (38%), Gaps = 36/237 (15%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY---ACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ +G+G FG+ Y + A KS L ++ Q E RE +M+ L+
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKS-LS-RITEMQQVEAFLREGLLMRGLN- 80
Query: 154 QQNIVEFRGAYEDRQSVHL-VMELCSGGELFDKIIAQGHY-TEKAAAALCRAIVNVVHHC 211
N++ G + + ++ G+L I + T K + + + +
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------- 264
+HRDL N +L +K DFGL+ RDI+ YY
Sbjct: 141 AEQKFVHRDLAARNCMLDESF---TVKVADFGLA---------RDILDREYYSVQQHRHA 188
Query: 265 -------APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
A E L+ + + DVWS GV+L+ LL+ G PP+ + + +G
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR 245
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 3e-16
Identities = 54/226 (23%), Positives = 84/226 (37%), Gaps = 49/226 (21%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIKREIQIMQHL 151
LGK LGRG FG + A K + ++ + + E++I+ H+
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHI 87
Query: 152 SGQQNIVEFRGA-YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
N+V GA + + +++E C G L + ++ + A + +
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 211 CHF----------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
H +HRDL N LLS ++K DFGL+
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNVVKICDFGLA--------- 195
Query: 255 RDIVGSAYYV------------APEVLR-RSYGKEIDVWSAGVILY 287
RDI YV APE + R Y + DVWS GV+L+
Sbjct: 196 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 4e-16
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
++EE+ + F ++ D S I+ K + SKLS E+ + + +D D +G
Sbjct: 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGA 72
Query: 453 IDYIEFISATMH 464
+ EF +A H
Sbjct: 73 LTLPEFCAA-FH 83
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 4e-13
Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 8/82 (9%)
Query: 469 ERDEHLYKA-FQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYE 527
E Y F+ D S +I+ + + + I D D DG +
Sbjct: 18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKL-SIPELSYIWELSDADCDGALTLP 76
Query: 528 EFCTMM------RSGTPQPAKL 543
EFC ++G P P L
Sbjct: 77 EFCAAFHLIVARKNGYPLPEGL 98
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 4e-16
Identities = 63/263 (23%), Positives = 101/263 (38%), Gaps = 59/263 (22%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY-----ACKSILKRKLVNKQDREDIK 142
DI L +ELG G FG +L + + A K++ K R+D +
Sbjct: 13 KRRDI----VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQ 65
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR 202
RE +++ +L ++IV+F G D + +V E G+L + A G R
Sbjct: 66 REAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124
Query: 203 AIVNVVHHCHFMGVM----------------HRDLKPENFLLSNKDGGAMLKATDFGLSV 246
+ + + HRDL N L+ ++K DFG+S
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS- 180
Query: 247 FIDEGKVYRDIVGSAYYV------------APEVLRRSYGK---EIDVWSAGVILYILLS 291
RD+ + YY PE + Y K E DVWS GVIL+ + +
Sbjct: 181 --------RDVYSTDYYRVGGHTMLPIRWMPPESIM--YRKFTTESDVWSFGVILWEIFT 230
Query: 292 -GVPPFWAETEKGIFDAILKGGV 313
G P++ + + + I +G V
Sbjct: 231 YGKQPWFQLSNTEVIECITQGRV 253
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 5e-16
Identities = 61/230 (26%), Positives = 91/230 (39%), Gaps = 25/230 (10%)
Query: 97 TLGK-ELGRGQFGITYLCTENSTGNSY--ACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ ELG G FG A K + ++ K D E++ RE QIM L
Sbjct: 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD- 68
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
IV G + +++ LVME+ GG L + G E + + + V +
Sbjct: 69 NPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKY 125
Query: 214 ---MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VYRDIVGSAYYV---AP 266
+HRDL N LL N+ K +DFGLS + Y + + AP
Sbjct: 126 LEEKNFVHRDLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 267 EVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
E + ++ K DVWS GV ++ LS G P+ + I +G
Sbjct: 183 ECI--NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 230
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 6e-16
Identities = 60/262 (22%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 66 QPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACK 125
+S T+ + K + P E + L +LG+G FG ++ T N T A K
Sbjct: 245 TVCPTSKPQTQGLAKDAWEI--PRESL----RLEVKLGQGCFGEVWMGTWNGTTRV-AIK 297
Query: 126 SILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDK 185
+ LK E +E Q+M+ L + +V+ + +++V E S G L D
Sbjct: 298 T-LKP---GTMSPEAFLQEAQVMKKLR-HEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDF 351
Query: 186 IIAQGHYTEKAAAAL--CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243
+ + + + I + + + M +HRDL+ N L+ + K DFG
Sbjct: 352 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL---VCKVADFG 408
Query: 244 LSVFIDEGKVYRDIVGSAYYV-----------APEVLR-RSYGKEIDVWSAGVILYILLS 291
L+ R I + Y APE + + DVWS G++L L +
Sbjct: 409 LA---------RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
Query: 292 -GVPPFWAETEKGIFDAILKGG 312
G P+ + + D + +G
Sbjct: 460 KGRVPYPGMVNREVLDQVERGY 481
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 7e-16
Identities = 57/231 (24%), Positives = 87/231 (37%), Gaps = 53/231 (22%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSI----LKRKLVNKQDREDIKREIQIMQHLS 152
GK LG G FG T + + LK + + +RE + E+++M L
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLG 106
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFD-------KIIAQGHYTEKAAAALCRAIV 205
+NIV GA ++L+ E C G+L + K E +
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 206 NVVHHCHF----------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
NV+ +HRDL N L+++ G ++K DFGL+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH---GKVVKICDFGLA---- 219
Query: 250 EGKVYRDIVGSAYYV------------APEVLR-RSYGKEIDVWSAGVILY 287
RDI+ + YV APE L Y + DVWS G++L+
Sbjct: 220 -----RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 58/248 (23%), Positives = 88/248 (35%), Gaps = 35/248 (14%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY--ACKSILKRKLVNKQDREDIKREI 145
DI +G G FG G A K +K + +K D D E+
Sbjct: 23 DWNDI----KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKR-MK-EYASKDDHRDFAGEL 76
Query: 146 QIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+++ L NI+ GA E R ++L +E G L D + A A+ +
Sbjct: 77 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
Query: 206 NVVHHCHF----------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+ + +HRDL N L+ + K DFGLS +
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---NYVAKIADFGLSRGQE 193
Query: 250 EGKVYRDIVGSAYYV---APEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGI 304
Y V A E L Y DVWS GV+L+ I+ G P+ T +
Sbjct: 194 V---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 250
Query: 305 FDAILKGG 312
++ + +G
Sbjct: 251 YEKLPQGY 258
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 1e-15
Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 34/231 (14%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
L K+LG GQFG ++ T N A K+ +K E E +M+ L
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTKV-AVKT-MKP---GSMSVEAFLAEANVMKTLQ-HDK 244
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFD--KIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+V+ ++ ++++ E + G L D K I +
Sbjct: 245 LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---------- 264
+HRDL+ N L+S + K DFGL+ R I + Y
Sbjct: 304 NYIHRDLRAANILVSASL---VCKIADFGLA---------RVIEDNEYTAREGAKFPIKW 351
Query: 265 -APEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
APE + S+ + DVWS G++L +++ G P+ + + A+ +G
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 2e-15
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 42/259 (16%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
M+ + + + L ++++ L + +G+G+FG L GN A K
Sbjct: 172 VMEGTVAAQDEFYRSGWAL--NMKEL----KLLQTIGKGEFGDVMLGDYR--GNKVAVKC 223
Query: 127 ILKRKLVNKQD--REDIKREIQIMQHLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELF 183
I K D + E +M L N+V+ G E++ +++V E + G L
Sbjct: 224 I-------KNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 184 DKIIAQGHYTEKAAAAL--CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241
D + ++G L + + + +HRDL N L+S + + K +D
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSD 332
Query: 242 FGLSVFIDEGKVYRDIVGSAYYV-------APEVLR-RSYGKEIDVWSAGVILYILLS-G 292
FGL+ ++ + APE LR + + + DVWS G++L+ + S G
Sbjct: 333 FGLT---------KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 383
Query: 293 VPPFWAETEKGIFDAILKG 311
P+ K + + KG
Sbjct: 384 RVPYPRIPLKDVVPRVEKG 402
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 56/317 (17%), Positives = 104/317 (32%), Gaps = 70/317 (22%)
Query: 42 QQQQQQQLHVQPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKE 101
+ L P ++ + P + + E P +I ++
Sbjct: 3 MESAAVTLTTLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEY----PRNNI----EYVRD 54
Query: 102 LGRGQFGITYLCT-ENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
+G G FG + A K + ++ + + D +RE +M N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALMAEFD-NPN 111
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGEL--------FDKIIAQGHYTEKAAAALCRAIVNVV 208
IV+ G + + L+ E + G+L + + H A + +
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 209 HHCHFMGVM----------------HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
+ + HRDL N L+ ++K DFGLS
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE---NMVVKIADFGLS------- 221
Query: 253 VYRDIVGSAYYV------------APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPF 296
R+I + YY PE + Y + E DVW+ GV+L+ + S G+ P+
Sbjct: 222 --RNIYSADYYKADGNDAIPIRWMPPESIF--YNRYTTESDVWAYGVVLWEIFSYGLQPY 277
Query: 297 WAETEKGIFDAILKGGV 313
+ + + + G +
Sbjct: 278 YGMAHEEVIYYVRDGNI 294
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 64 RQQPMKSSATSTRP--VQKPETVLGKPLEDI-RQFYTLGKELGRGQFGITYLCTENSTGN 120
P + + + ++ P+ + I R+ L ELG G FG +L ++
Sbjct: 8 SLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLP 67
Query: 121 SY-----ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
A K++ K ++ R+D +RE +++ L Q+IV F G + + + +V E
Sbjct: 68 EQDKMLVAVKAL---KEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFE 123
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH------------CHF---MGVMHRD 220
G+L + + G + A A + + + +HRD
Sbjct: 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183
Query: 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------APEV 268
L N L+ G ++K DFG+S RDI + YY PE
Sbjct: 184 LATRNCLVGQ---GLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLPIRWMPPES 231
Query: 269 LRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313
+ Y K E DVWS GV+L+ + + G P++ + D I +G
Sbjct: 232 IL--YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 278
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-15
Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 38/233 (16%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
L + LG GQFG ++ N A KS LK + E +M+ L Q
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHT-KVAVKS-LK---QGSMSPDAFLAEANLMKQLQ-HQR 69
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFD--KIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+V ++ ++++ E G L D K + T + I +
Sbjct: 70 LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV---------- 264
+HRDL+ N L+S+ K DFGL+ R I + Y
Sbjct: 129 NYIHRDLRAANILVSDTL---SCKIADFGLA---------RLIEDNEYTAREGAKFPIKW 176
Query: 265 -APEVLRRSYGK---EIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
APE + YG + DVWS G++L +++ G P+ T + + +G
Sbjct: 177 TAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 2e-15
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+S E +F D D G ++ E++ + + L T + + D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGK 60
Query: 453 IDYIEFISATMH 464
+ +F A H
Sbjct: 61 LSKDQFALA-FH 71
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-12
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCT 531
+ F DKD G+++ E+ G+ + I S DT + G+++ ++F
Sbjct: 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFAL 68
Query: 532 MM-------RSGTPQPAKL 543
G P L
Sbjct: 69 AFHLISQKLIKGIDPPHVL 87
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 3e-15
Identities = 58/260 (22%), Positives = 100/260 (38%), Gaps = 46/260 (17%)
Query: 68 MKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI 127
M S + + L ++++ L + +G+G+FG L GN A K I
Sbjct: 1 MGGSVAAQDEFYRSGWAL--NMKEL----KLLQTIGKGEFGDVMLGDYR--GNKVAVKCI 52
Query: 128 LKRKLVNKQD--REDIKREIQIMQHLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELFD 184
K D + E +M L N+V+ G E++ +++V E + G L D
Sbjct: 53 -------KNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 185 --KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
+ + + + + +HRDL N L+S + + K +DF
Sbjct: 105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDF 161
Query: 243 GLSVFIDEGKVYRDIVGSAYYV-------APEVLRRSYGK---EIDVWSAGVILYILLS- 291
GL+ ++ + APE LR K + DVWS G++L+ + S
Sbjct: 162 GLT---------KEASSTQDTGKLPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSF 210
Query: 292 GVPPFWAETEKGIFDAILKG 311
G P+ K + + KG
Sbjct: 211 GRVPYPRIPLKDVVPRVEKG 230
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 3e-15
Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 19/144 (13%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSK------LSETEVKQLMDAADVDGNGTIDY 455
+ + + I +L+ L + S E + L+ ++ NG +D
Sbjct: 7 HHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQ 65
Query: 456 IEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKD----YGIGDEASIKE 511
EF +R H FQ + G + +L A+++ GI +
Sbjct: 66 EEFARL------WKRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLH 118
Query: 512 IISEVDTDNDGRINYEEF-CTMMR 534
+++ +D+ GR+++ C +MR
Sbjct: 119 LVTLRYSDSVGRVSFPSLVCFLMR 142
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 4e-13
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 14/106 (13%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLAR----LGSKLSETEVKQLMDAADVDGNGTID 454
+ + +F + G + +L + G +S E+ L+ D G +
Sbjct: 75 LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVS 132
Query: 455 YIEFISATMHRYRLERDEHLYKAFQYFDKDNSG-YITRDE-LETAM 498
+ + M R E + K F+ KD G Y+T E + M
Sbjct: 133 FPSLVCFLM------RLEAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 6e-15
Identities = 40/223 (17%), Positives = 85/223 (38%), Gaps = 40/223 (17%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDI-RQFYTLGKELGRGQFGITYLCT 114
M Q + +SSA Q G+ + D+ + +G +G+G FG YL
Sbjct: 2 MRVKAAQAGR---QSSAKRHLAEQFAV---GEIITDMAAAAWKVGLPIGQGGFGCIYLAD 55
Query: 115 ENSTGNSYA-CKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR------------ 161
NS+ + + ++K V D + E++ Q + + I ++
Sbjct: 56 MNSSESVGSDAPCVVK---VEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112
Query: 162 ----GAYEDRQSVH--LVMEL--CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
G ++ + ++M+ ++++ ++ K L I++++ + H
Sbjct: 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE 170
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
+H D+K N LL+ K+ + D+GL+ Y
Sbjct: 171 HEYVHGDIKASNLLLNYKN-PDQVYLVDYGLA------YRYCP 206
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-14
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+++E+ + F + D +G I K + SKL E+ + + +D D +G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59
Query: 453 IDYIEFISATMH 464
+ EF +A H
Sbjct: 60 LTLDEFCAA-FH 70
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-13
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCT 531
++ F+ D +G+I + + + I D D DG + +EFC
Sbjct: 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCA 67
Query: 532 MM------RSGTPQPAKL 543
++G P KL
Sbjct: 68 AFHLVVARKNGYDLPEKL 85
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-14
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A+ + + +F + D SG +T + +T L + S L + ++ + + +D+D +G
Sbjct: 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGK 64
Query: 453 IDYIEFISATMH 464
+ EFI A MH
Sbjct: 65 LTAEEFILA-MH 75
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 5e-13
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM-- 533
+ F DK SG++T + T + + +A + I + D D DG++ EEF M
Sbjct: 18 QLFNSHDKTMSGHLTGPQARTILMQSSL-PQAQLASIWNLSDIDQDGKLTAEEFILAMHL 76
Query: 534 ----RSGTPQPAKL 543
SG P P L
Sbjct: 77 IDVAMSGQPLPPVL 90
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 2e-14
Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 62/269 (23%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCT-ENSTGNSY----ACKSILKRKLVNKQDREDIK 142
P +++ LGK LG G+FG T + G + A K + ++ + + D+
Sbjct: 21 PRKNL----VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLL 74
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL-----------FDKIIAQGH 191
E +++ + ++++ GA + L++E G L + + G
Sbjct: 75 SEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 192 YTEKAAAALCRAIVNVVHHCHF-------------MGVMHRDLKPENFLLSNKDGGAMLK 238
+ + + F M ++HRDL N L++ G +K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE---GRKMK 190
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAYYV------------APEVLR-RSYGKEIDVWSAGVI 285
+DFGLS RD+ YV A E L Y + DVWS GV+
Sbjct: 191 ISDFGLS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 286 LY-ILLSGVPPFWAETEKGIFDAILKGGV 313
L+ I+ G P+ + +F+ + G
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLKTGHR 270
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 1e-12
Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 31/211 (14%)
Query: 65 QQPMKSSATSTRPVQKPETVLGKPLEDIR-QFYTLGKELGRGQFGITYLCTENSTGNSYA 123
+ + + +T P G L D + + L R GI Y ST +
Sbjct: 15 TENLYFQSMTTSLEALPT---GTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDS 71
Query: 124 CKS----ILKRKLVNKQ--------DREDIKREIQIMQHLSGQQNI----VEFRGAYEDR 167
LK + + R ++ + L + G ++D+
Sbjct: 72 GPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDK 131
Query: 168 QSVHLVMEL--CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPEN 225
LV+ S D + +E++ + +++ + H +H ++ EN
Sbjct: 132 YRF-LVLPSLGRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN 189
Query: 226 FLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
+ +D + + +G + Y
Sbjct: 190 IFVDPED-QSQVTLAGYGFA------FRYCP 213
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 2e-12
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A++ EE F ++ SG IT ++ + + S L + + Q+ AD++ +G
Sbjct: 26 AITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGR 82
Query: 453 IDYIEFISATMH 464
+D +EF A M
Sbjct: 83 MDQVEFSIA-MK 93
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 4e-10
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528
+ + + K SG+IT D+ G+ + + +I + D +NDGR++ E
Sbjct: 29 VEERAKHDQQFHSLKPISGFITGDQARNFFFQSGL-PQPVLAQIWALADMNNDGRMDQVE 87
Query: 529 FCTMM------RSGTPQPAKL 543
F M G P+ L
Sbjct: 88 FSIAMKLIKLKLQGYQLPSAL 108
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 9e-11
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 463 MHRYRLERDEHLY-KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDND 521
+ +L +Y K ++ + N+G + + +K G+ D + +I DTD
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI-LGKIWDLADTDGK 59
Query: 522 GRINYEEFCTMMR------SGTPQPAKLI 544
G ++ +EF +R +G +
Sbjct: 60 GVLSKQEFFVALRLVACAQNGLEVSLSSL 88
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 1e-09
Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
++ + + ++ +G + + L + S L + + ++ D AD DG
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDG 58
Query: 450 NGTIDYIEFISATMH 464
G + EF A +
Sbjct: 59 KGVLSKQEFFVA-LR 72
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 2e-10
Identities = 65/447 (14%), Positives = 129/447 (28%), Gaps = 127/447 (28%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRK---LVNKQD 137
P+++L K E+I + L ++ + +L+ L++
Sbjct: 42 PKSILSK--EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99
Query: 138 REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKA 196
E + + ++ DR L + ++F K +++ K
Sbjct: 100 TEQRQPSMMTRMYIE-----------QRDR--------LYNDNQVFAKYNVSRLQPYLKL 140
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
AL L+P +L + G G + + V
Sbjct: 141 RQALLE------------------LRPAKNVLIDGVLG-------SGKTWVALD--VCLS 173
Query: 257 IVGSAYYVAPEVLRRSYGKEIDV-W-------SAGVILYILLSGVPPFWAETEKGIFDAI 308
+V + K + W S +L +L + D
Sbjct: 174 Y---------KVQCKMDFK---IFWLNLKNCNSPETVLEMLQK----LLYQ-----IDPN 212
Query: 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA 368
D S L I S + +R++L P + VL + + A + +
Sbjct: 213 WTSRSDHSSNIKLRI-HSIQAELRRLLKSKPYEN--CLLVLLNVQNAKAWNAFN--LSCK 267
Query: 369 VL--SRMKQ---FRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELK 423
+L +R KQ F + ++L + L+ +E+K L + + E+
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP----REVL 323
Query: 424 TG----LARLGSKLSETEVKQLMDAADVDGNGTIDY---------IEFISATMHRYRLER 470
T L+ + + DG T D I ++++ LE
Sbjct: 324 TTNPRRLSIIAESIR-------------DGLATWDNWKHVNCDKLTTIIESSLN--VLEP 368
Query: 471 DE--HLYKAFQYFDKDNSGYITRDELE 495
E ++ F +I L
Sbjct: 369 AEYRKMFDRLSVFPPSA--HIPTILLS 393
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 62.1 bits (150), Expect = 2e-10
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
I+ + ++ +D D+SGT+ E++ L G KL ++ Q++ A D ID+ F
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNF 662
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYI--TRDE-LETAM 498
+ + RLE L+K F+ D +N+G I L ++
Sbjct: 663 VRCLV---RLEI---LFKIFKQLDPENTGTIQLDLISWLSFSV 699
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 7e-08
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 404 TMFANMDTDKSGTITYEELKTGLAR----LGSKLSETEVKQLMDAADVDGNGTIDYIEFI 459
A D + S L+ LA+ S K ++D D DG+G + EF
Sbjct: 539 AQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF- 597
Query: 460 SATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTD 519
+ + K ++ D D SG + E+ A+++ G + ++I D
Sbjct: 598 -----YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFAD 652
Query: 520 NDGRINYEEF-CTMMR 534
++ I+++ F ++R
Sbjct: 653 DELIIDFDNFVRCLVR 668
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 62.5 bits (151), Expect = 2e-10
Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 17/182 (9%)
Query: 362 DKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEE 421
+ +VL ++ + M I SEEE + + +F + ++ E
Sbjct: 694 ISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEE-RQFRKLFVQLA-GDDMEVSATE 751
Query: 422 LKTGLARLGSK--------LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473
L L ++ ++ + ++ D D G + + EF +Y +
Sbjct: 752 LMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEF------KYLWNNIKK 805
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEF-CTM 532
++ F+ D SG I +EL A + G I +I +D G ++++ F +
Sbjct: 806 WQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFISCL 865
Query: 533 MR 534
+R
Sbjct: 866 VR 867
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 62.5 bits (151), Expect = 2e-10
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
I+ T+F D DKSG+++ E++ + G KL ++ Q++ A D ID+ F
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNF 664
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
+ + RLE L+K F+ D +N+G I
Sbjct: 665 VRCLV---RLEI---LFKIFKQLDPENTGTIQ 690
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 5e-10
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF 458
IK + ++ +TD+SGTI EL G L++ + ++ D G +D+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQ-HIYSMIIRRYSDETGNMDFDNF 861
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
IS + RL+ +++AF+ DK+ +G I
Sbjct: 862 ISCLV---RLDA---MFRAFRSLDKNGTGQIQ 887
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 1e-06
Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 15/175 (8%)
Query: 369 VLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR 428
S K + A + LSEEEI + I+ +EL+T L R
Sbjct: 502 FFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNR 561
Query: 429 LGSK--------LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480
+ SK S + +++ D DGNG + +EF R + F+
Sbjct: 562 IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEF------NILWNRIRNYLTIFRK 615
Query: 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEF-CTMMR 534
FD D SG ++ E+ A++ G + ++I D++ I+++ F ++R
Sbjct: 616 FDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 670
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 60.7 bits (146), Expect = 7e-10
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 377 RAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET 436
R +N+++ L A+ +S+E++ + F + D K+G + E+ + L +G + E
Sbjct: 702 RTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEA 761
Query: 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELE 495
E ++M D + G + + FI + + + +F+ D YIT DEL
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK-NYITVDELR 820
Query: 496 TAMKD 500
+
Sbjct: 821 RELPP 825
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 2e-09
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 12/143 (8%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
LGK LGRG FG + +T + A K LK + + E++I+ H+
Sbjct: 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGA-THSEHRALMSELKILIHI 82
Query: 152 SGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
N+V GA + + +++E C G L + ++ +
Sbjct: 83 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP----YKTKGARFRQG 138
Query: 211 CHFMGVMHRDLKPENFLLSNKDG 233
++G + DLK +++
Sbjct: 139 KDYVGAIPVDLKRRLDSITSSQS 161
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 26/96 (27%)
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV--------- 264
+HRDL N LLS ++K DFGL+ RDI YV
Sbjct: 212 RKCIHRDLAARNILLSE---KNVVKICDFGLA---------RDIYKDPDYVRKGDARLPL 259
Query: 265 ---APEVLR-RSYGKEIDVWSAGVILY-ILLSGVPP 295
APE + R Y + DVWS GV+L+ I G P
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 3e-09
Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 13/142 (9%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
+ + D +K + ++ELK L L ++ + +++ D +++ E +
Sbjct: 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETF 72
Query: 462 TMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIGDEASIKEIISEVD 517
Y+ L + + +AF+ ++ + L T ++ A +I +
Sbjct: 73 ----YKMLTQRAEIDRAFEEAAGSAE-TLSVERLVTFLQHQQREEEAGPALALSLIERYE 127
Query: 518 TD----NDGRINYEEFCTMMRS 535
++ + F + S
Sbjct: 128 PSETAKAQRQMTKDGFLMYLLS 149
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 2e-05
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 467 RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRIN 525
R + ++ + DK+ + EL+ +K+ I D+ ++I E D +
Sbjct: 6 RQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLE 65
Query: 526 YEEFCTMMRSGTPQP 540
EE T + T +
Sbjct: 66 DEEIETFYKMLTQRA 80
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-09
Identities = 11/72 (15%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 468 LERD-EHLYKAFQYFDKD--NSGYITRDELETAMKD---YGIGDEASIKEIISEVDTDND 521
++ L F+ + + ++++EL+ ++ + ++ ++ E+D + D
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 522 GRINYEEFCTMM 533
G +++EEF ++
Sbjct: 62 GEVSFEEFQVLV 73
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-05
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 396 EEEIKGLKTMFANMDTDK--SGTITYEELKTGLAR-LGSKLSETE-VKQLMDAADVDGNG 451
++ LK++F + ++ EELK + S L + L D +G+G
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 452 TIDYIEFIS 460
+ + EF
Sbjct: 63 EVSFEEFQV 71
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 7e-09
Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528
D+ Y A +G+++ D+++ + + + + + D D+DG ++ +E
Sbjct: 11 PEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDE 69
Query: 529 FCTMM------RSGTPQPAKL 543
F M P P L
Sbjct: 70 FAVAMFLVYCALEKEPVPMSL 90
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 1e-08
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A+ E+ +F ++ +G ++ +++K L SKL + ++ + +D+D +G
Sbjct: 8 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGM 64
Query: 453 IDYIEFISATMH 464
+D EF M
Sbjct: 65 LDRDEFA-VAMF 75
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 4e-08
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 468 LERD-EHLYKAFQYFDKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVDTDN 520
+E E + F F D GY+T+++L M+ D ++ +I+ ++D
Sbjct: 4 MEHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCR 62
Query: 521 DGRINYEEFCTMM 533
DG++ ++ F +++
Sbjct: 63 DGKVGFQSFFSLI 75
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGN 450
E ++ + F DK G +T E+L+ + + L ++ V ++M D +
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 451 GTIDYIEFIS 460
G + + F S
Sbjct: 64 GKVGFQSFFS 73
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 4e-07
Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 9/73 (12%)
Query: 479 QYFDK--DNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM--- 533
+ F +G IT + M + + +I D D DG ++ EEF
Sbjct: 55 EIFYTLSPVNGKITGANAKKEMVKSKL-PNTVLGKIWKLADVDKDGLLDDEEFALANHLI 113
Query: 534 ---RSGTPQPAKL 543
G PA L
Sbjct: 114 KVKLEGHELPADL 126
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-05
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
E + ++ +F + +G IT K + + SKL T + ++ ADVD +G
Sbjct: 43 EWVVGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK--SKLPNTVLGKIWKLADVDKDG 99
Query: 452 TIDYIEFISATMH 464
+D EF H
Sbjct: 100 LLDDEEFA-LANH 111
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 4e-07
Identities = 33/221 (14%), Positives = 59/221 (26%), Gaps = 53/221 (23%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSI-----LKRKLVNKQDREDIKREIQIMQH 150
+++G G FG + + A K I +++ E+I EI I +
Sbjct: 22 LQRCEKIGEGVFGEVFQTI--ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKE 79
Query: 151 LSGQQ--------NIVEFRGAY------------------------------EDRQSVHL 172
LS + + + +
Sbjct: 80 LSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFI 139
Query: 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN-- 230
V+E GG +++ + A + L + ++ + HRDL N LL
Sbjct: 140 VLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTS 199
Query: 231 ------KDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
G GL V I + + R
Sbjct: 200 LKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFC 240
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 8e-07
Identities = 15/75 (20%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE+ + + F Y K+ + + + EL+ + DEA+ ++++S +D+
Sbjct: 5 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 64
Query: 519 DNDGRINYEEFCTMM 533
+ D ++++E+C +
Sbjct: 65 NRDNEVDFQEYCVFL 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFAN--MDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVD 448
E+ + + + F + ELK L R LG + E ++LM D +
Sbjct: 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 65
Query: 449 GNGTIDYIEFIS 460
+ +D+ E+
Sbjct: 66 RDNEVDFQEYCV 77
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 1e-06
Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 12/126 (9%)
Query: 429 LGSKLSETEVKQLMDAADVDGN---GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDN 485
+G S+ Q+ D+ + E D L F DK+
Sbjct: 52 IGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNA 111
Query: 486 SGYITRDELETAMKDYGIGDEASIKE---------IISEVDTDNDGRINYEEFCTMMRSG 536
G +T +E++ + ++ S + I+ E+D N G I E+ ++
Sbjct: 112 DGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171
Query: 537 TPQPAK 542
+ A
Sbjct: 172 PSEAAA 177
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 2e-06
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGL-KTMF---ANMDTDKSGTITYEELKTGLARL 429
K+F + + + + + MF A +T +ELK +L
Sbjct: 32 KRFNQLQVDGVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQL 91
Query: 430 GSKLSETEVKQLMDAADVDGNGTIDYIEF---ISATMHRYRLER-----DEHLYKAFQYF 481
+ + ++ D D + +G + E I+ + +L + DE+ +
Sbjct: 92 TDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEEL 151
Query: 482 DKDNSGYITRDELETAMK 499
D N GYI ++LE +
Sbjct: 152 DPTNLGYIEMEDLEALLL 169
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-06
Identities = 13/70 (18%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 472 EHLYKAFQ-YFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDTDNDGR 523
+ + F Y K+ + + + EL+ + DEA+ ++++S +D++ D
Sbjct: 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNE 72
Query: 524 INYEEFCTMM 533
++++E+C +
Sbjct: 73 VDFQEYCVFL 82
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 5e-04
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFAN--MDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVD 448
E+ + + + F + ELK L R LG + E ++LM D +
Sbjct: 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSN 68
Query: 449 GNGTIDYIEFIS 460
+ +D+ E+
Sbjct: 69 RDNEVDFQEYCV 80
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-06
Identities = 10/65 (15%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 475 YKAFQYFDKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVDTDNDGRINYEE 528
+ + I++ ++ G+ + ++I +D ++DGRI+++E
Sbjct: 17 FYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDE 76
Query: 529 FCTMM 533
+ T++
Sbjct: 77 YWTLI 81
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 5e-05
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
Query: 396 EEEIKGLKTMF---ANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADV 447
E+ + L F + + I+ + L + L + +L+ D
Sbjct: 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA 66
Query: 448 DGNGTIDYIEFIS 460
+ +G I + E+ +
Sbjct: 67 NHDGRISFDEYWT 79
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 2e-06
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 17/75 (22%)
Query: 478 FQYFDKDNSGYITRDELETAM-----KDYGIGDEAS------------IKEIISEVDTDN 520
F D ++ G + ELE K Y +E + ++ VDT+
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 521 DGRINYEEFCTMMRS 535
D + EEF +
Sbjct: 86 DRLVTLEEFLASTQR 100
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 39.2 bits (91), Expect = 4e-04
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 20/98 (20%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
KT F D + G + +EL+ + E++++ D + +
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTK--------ELEKVYDPKNEE------------D 61
Query: 462 TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK 499
M ER + D + +T +E + +
Sbjct: 62 DMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 36/137 (26%)
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGK--VYRDIVGSAYYVA 265
H+ H ++HRD+K N LL D + K TDFG+S + + + + G+ Y+
Sbjct: 153 HYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYID 209
Query: 266 PEVLRR------SYGKEIDVWSAGVILYILLSGVPPF-------------WAET--EKGI 304
PE + S DV+S GV+L+ +L WA G
Sbjct: 210 PEYFIKGRLTEKS-----DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 305 FDAI----LKGGVDFES 317
+ I L + ES
Sbjct: 265 LEQIVDPNLADKIRPES 281
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-06
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 467 RLERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD--YGIGDEASIKEIISEVDTDND 521
LE+ + + Y N + RD+L+ ++ + E+D + D
Sbjct: 4 ELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTD 63
Query: 522 GRINYEEFCTMM 533
G +N++EF ++
Sbjct: 64 GAVNFQEFLILV 75
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 4e-05
Identities = 8/69 (11%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 396 EEEIKGLKTMF---ANMDTDKSGTITYEELKTGLAR-LGSKLSETEVKQLMDAADVDGNG 451
E+ + + ++ + + + + ++LK L + + D++ +G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNF-HAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDG 64
Query: 452 TIDYIEFIS 460
+++ EF+
Sbjct: 65 AVNFQEFLI 73
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-06
Identities = 11/72 (15%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKDY---GIGDEASIKEIISEVDTDND 521
LE E + F + ++ ++ +E + + + D S+ E + +D + D
Sbjct: 17 LEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQD 76
Query: 522 GRINYEEFCTMM 533
+ + E+ ++
Sbjct: 77 SELKFNEYWRLI 88
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 3e-06
Identities = 13/75 (17%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQYF--DKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE+ + + F + + + + + EL+ + DEA+ ++++S +D+
Sbjct: 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 76
Query: 519 DNDGRINYEEFCTMM 533
+ D ++++E+C +
Sbjct: 77 NRDNEVDFQEYCVFL 91
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 2e-04
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFAN--MDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVD 448
E+ + + + F + ELK L R LG + E ++LM D +
Sbjct: 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 77
Query: 449 GNGTIDYIEFIS 460
+ +D+ E+
Sbjct: 78 RDNEVDFQEYCV 89
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 4e-06
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-R 271
+HRD+K N LL D K +DFGL+ ++ + IVG+ Y+APE LR
Sbjct: 154 HIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE 210
Query: 272 SYGKEIDVWSAGVILYILLSGVPPF-----------WAE---TEKGIFDAIL 309
K D++S GV+L +++G+P E E+ + +
Sbjct: 211 ITPKS-DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 261
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 4e-06
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE E L F + K+ + +++ EL+ ++ D ++ +I+ E+D
Sbjct: 4 LETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE 63
Query: 519 DNDGRINYEEFCTMM 533
+ DG ++++EF ++
Sbjct: 64 NGDGEVDFQEFVVLV 78
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 37.8 bits (88), Expect = 8e-04
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 396 EEEIKGLKTMF---ANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADV 447
E ++ L +F + + DK ++ +ELK L L + V ++M D
Sbjct: 5 ETAMETLINVFHAHSGKEGDK-YKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE 63
Query: 448 DGNGTIDYIEFIS 460
+G+G +D+ EF+
Sbjct: 64 NGDGEVDFQEFVV 76
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 4e-06
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQYF--DKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE E + F + K + +++ EL+ + I D+A I EI +D
Sbjct: 7 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDA 66
Query: 519 DNDGRINYEEFCTMM 533
+ D +++++EF +++
Sbjct: 67 NQDEQVDFQEFISLV 81
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 8e-06
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE+ + FQ Y + + + + EL+ ++ E + +S +DT
Sbjct: 5 LEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 64
Query: 519 DNDGRINYEEFCTMM 533
+ D +++ E+ +
Sbjct: 65 NKDCEVDFVEYVRSL 79
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--VYRDIVGSAYYVAPEVLRRSY 273
++HRD+K N LL D DFGL+ +D V + G+ ++APE L
Sbjct: 155 IIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 211
Query: 274 GKE-IDVWSAGVILYILLSGVPPF 296
E DV+ GV+L L++G F
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAF 235
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-05
Identities = 12/76 (15%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 467 RLERD-EHLYKAFQYF--DKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVD 517
LE + F + + ++ +T+ EL+ M+ D+ ++ +++ ++D
Sbjct: 3 ELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLD 62
Query: 518 TDNDGRINYEEFCTMM 533
+ D ++++ EF +
Sbjct: 63 ANGDAQVDFSEFIVFV 78
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-05
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 472 EHLYKAFQYF--DKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVDTDNDGR 523
E L FQ N+ I++ E M D + ++ ++D D+DG+
Sbjct: 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQ 72
Query: 524 INYEEFCTMM 533
++++EF ++
Sbjct: 73 LDFQEFLNLI 82
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 10/62 (16%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 479 QYFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDTDNDGRINYEEFCT 531
QY ++ + + + EL+ + + I ++ + +++ +D++ DG +++EF
Sbjct: 17 QYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMA 76
Query: 532 MM 533
+
Sbjct: 77 FV 78
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-05
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 468 LERD-EHLYKAFQYF--DKDNSGYITRDELETAMKD---YGIGDEASIKEIISEVDTDND 521
LE+ + F + + + ++R EL+ +K G E+SI +++ +D ++D
Sbjct: 5 LEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSD 64
Query: 522 GRINYEEFCTMM 533
I+++E+ +
Sbjct: 65 QEIDFKEYSVFL 76
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 3e-05
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD-------YGIGDEASIKEIISEVD 517
LER+ E + F Y K + + + E + ++ +E I+ I+ ++D
Sbjct: 7 LERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLD 66
Query: 518 TDNDGRINYEEFCTMM 533
T+ D ++++EEF +M
Sbjct: 67 TNADKQLSFEEFIMLM 82
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-05
Identities = 13/73 (17%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD----YGIGDEASIKEIISEVDTDN 520
L++ L F Y ++ + +++ EL+ ++ +A I ++ ++D +
Sbjct: 5 LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNK 64
Query: 521 DGRINYEEFCTMM 533
D +N++E+ T +
Sbjct: 65 DQEVNFQEYVTFL 77
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 8e-05
Identities = 10/70 (14%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 472 EHLYKAFQYF--DKDNSGYITRDELETAMKD------YGIGDEASIKEIISEVDTDNDGR 523
+ L F + + + +++ EL+ + D +++I++++D++ D
Sbjct: 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNE 69
Query: 524 INYEEFCTMM 533
+++ EF ++
Sbjct: 70 VDFNEFVVLV 79
|
| >2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus} Length = 550 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 1e-04
Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 9/158 (5%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+L + ++ L M A + EEL++ A + E D
Sbjct: 379 HSLKPKLLEALDDMLAQDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVERGPDEAI 438
Query: 452 TIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKE 511
S + + +D+ Y Y G ++ + +T M + + +
Sbjct: 439 EDGEEG--SEDDAEWVVTKDKSKYDEIFYNLAPADGKLSGSKAKTWMVGTKL-PNSVLGR 495
Query: 512 IISEVDTDNDGRINYEEFCTMM------RSGTPQPAKL 543
I D D DG ++ EEF G P L
Sbjct: 496 IWKLSDVDRDGMLDDEEFALASHLIEAKLEGHGLPTNL 533
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A Length = 261 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 2e-04
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 16/182 (8%)
Query: 372 RMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS 431
++++ + L ++L +AL + +K + T Y+ L+ L +
Sbjct: 66 KLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVN 125
Query: 432 --KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
+ + L++ D G I + F + + + ++ F+ ++G+
Sbjct: 126 VPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFC 184
Query: 490 TRDELETAMKD-----YGIGDEASIKE--IISEVD-----TDNDGRINYEEFCTMMRSGT 537
+ L + D +G+ AS I V +N I F MR
Sbjct: 185 DQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL-E 243
Query: 538 PQ 539
PQ
Sbjct: 244 PQ 245
|
| >1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A Length = 100 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 3e-04
Identities = 5/43 (11%), Positives = 19/43 (44%)
Query: 491 RDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533
++ + + ++ + D + D +I++ EF +++
Sbjct: 36 KENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL 78
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 544 | |||
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.95 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.94 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.93 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.93 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.92 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.92 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.92 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.91 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.91 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.91 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.91 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.9 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.9 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.89 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.89 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.89 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.89 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.89 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.89 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.89 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.88 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.88 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.88 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.88 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.88 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.88 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.88 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.88 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.87 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.87 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.87 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.86 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.86 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.86 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.86 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.86 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.86 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.85 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.85 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.85 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.84 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.84 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.84 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.84 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.84 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.84 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.83 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.83 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.83 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.83 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.83 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.83 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.83 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.83 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.82 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.82 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.82 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.81 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.81 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.81 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.81 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.81 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.8 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.8 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.8 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.8 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.79 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.79 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.79 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.79 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.79 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.79 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.78 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.78 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.78 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.77 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.77 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.77 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.76 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.76 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.76 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.74 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.73 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.72 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.68 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.68 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.67 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.67 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.67 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.66 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.65 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.65 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.64 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.63 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.62 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.62 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.61 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.61 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.61 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.56 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.55 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.55 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.53 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.52 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.52 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.5 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.48 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.48 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.48 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.47 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.46 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.46 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.46 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.43 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.42 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.41 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.4 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.4 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.4 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.39 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.38 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.36 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.35 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.35 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.34 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.32 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.32 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.32 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.32 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.31 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.31 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.3 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.3 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.3 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.29 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.29 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.28 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.28 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.27 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.27 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.27 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.25 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.25 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.25 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.25 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.24 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.24 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.24 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.24 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.23 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.23 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.23 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.23 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.23 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.23 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.23 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.22 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.22 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.22 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.21 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.21 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.21 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.21 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.21 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.2 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.2 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.2 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.2 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.2 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.2 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.19 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.19 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.19 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.19 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.19 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.19 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.19 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.18 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.18 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.18 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.18 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.18 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.17 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.17 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.17 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.17 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.16 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.16 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.16 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.16 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.16 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.16 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.16 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.16 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.16 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.16 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.16 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.14 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.14 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.14 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.14 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 99.14 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.14 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.14 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.14 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.14 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.14 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.13 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.13 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 99.12 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.12 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.11 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.11 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.11 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.11 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.11 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 99.1 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.1 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.1 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.1 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.1 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.09 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.09 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 99.08 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.08 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.08 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.08 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.08 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.08 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.07 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.07 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.07 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 99.06 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.06 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.06 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 99.05 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.04 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.04 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 99.04 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.04 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.04 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 99.03 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.03 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.03 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.03 |
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-78 Score=637.51 Aligned_cols=449 Identities=36% Similarity=0.599 Sum_probs=396.9
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh----------hcHHHHHHHHHHHHhccCCC
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK----------QDREDIKREIQIMQHLSGQQ 155 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~~h~ 155 (544)
......+.++|++++.||+|+||+||+|.+..++..||+|++.+...... ...+.+.+|+.+++++. ||
T Consensus 28 ~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp 106 (504)
T 3q5i_A 28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HP 106 (504)
T ss_dssp CEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-CT
T ss_pred eccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-CC
Confidence 33445677889999999999999999999999999999999976543221 34577899999999997 99
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 156 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
||+++++++...+.++||||||+||+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++..+...
T Consensus 107 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCS
T ss_pred CCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCc
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999997765556
Q ss_pred cEEEeecCCcccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC
Q 009091 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
.+||+|||++............+||+.|+|||++.+.++.++|||||||++|+|++|..||.+......+..+..+...+
T Consensus 187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266 (504)
T ss_dssp SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 79999999999877665566778999999999998889999999999999999999999999999999999999988777
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCC---cccHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK---PIGSAVLSRMKQFRAMNKLKKMALKVIAE 392 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~---~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 392 (544)
+.+.+..+++++++||.+||++||.+|||++++|+||||++....... ......+.++++|...+++++.++..+..
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~ 346 (504)
T 3q5i_A 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGS 346 (504)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHH
T ss_pred CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 766677899999999999999999999999999999999876544321 12345567888899999999999999987
Q ss_pred hh-hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh--------CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 393 AL-SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL--------GSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 393 ~~-~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~--------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.+ +++++++++++|..||.|++|+|+.+||..++..+ +...+..++..+|+.+|.|+||.|+|+||+..+.
T Consensus 347 ~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 426 (504)
T 3q5i_A 347 KLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCM 426 (504)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHS
T ss_pred cCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 77 89999999999999999999999999999999988 5577889999999999999999999999998876
Q ss_pred ccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 464 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
........+.++.+|+.+|+|+||+|+.+||+.++...+. ++++++++|..+|.|+||.|+|+||+.+|.+.
T Consensus 427 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~-~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 498 (504)
T 3q5i_A 427 DKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSI-SEKTWNDVLGEADQNKDNMIDFDEFVSMMHKI 498 (504)
T ss_dssp CHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCC-CHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHH
T ss_pred hhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCC-CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 6544556788999999999999999999999999876433 78899999999999999999999999999864
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-78 Score=634.08 Aligned_cols=446 Identities=39% Similarity=0.659 Sum_probs=398.0
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
...+.++|++.+.||+|+||.||+|.+..++..||||++.+.........+.+.+|+.+++++. ||||+++++++...+
T Consensus 21 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~ 99 (484)
T 3nyv_A 21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKG 99 (484)
T ss_dssp CCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSS
T ss_pred CCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 3456778999999999999999999999999999999997665544566788999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+++||||+.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++...
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999999999999889999999999999999999999999999999999999976556678999999999887
Q ss_pred cCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.........+||+.|+|||++.+.++.++|||||||++|+|++|..||.+......+..+..+...+..+.+..+++.++
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 259 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK 259 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHH
T ss_pred ccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHH
Confidence 76655566789999999999988999999999999999999999999999999999999999988888888888999999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCCCC---CCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHHHHhhHHH
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEA---SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEEEIKGLKT 404 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~---~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~ 404 (544)
+||.+||++||.+|||+.++|+||||+..... ...+.....+..+++|...+++++.++..++..+ ++++++++.+
T Consensus 260 ~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~ 339 (484)
T 3nyv_A 260 DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTA 339 (484)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 99999999999999999999999999875432 2334556778899999999999999999998776 7899999999
Q ss_pred HhcccCCCCCCccCHHHHHHHHH----HhCCCCC-------HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHH
Q 009091 405 MFANMDTDKSGTITYEELKTGLA----RLGSKLS-------ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473 (544)
Q Consensus 405 ~F~~~D~~~~G~I~~~e~~~~l~----~~~~~~~-------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~ 473 (544)
+|..+|.|++|.|+.+||..++. .+|..++ ..++..+|+.+|.|++|.|+|+||+..+.........+.
T Consensus 340 ~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~ 419 (484)
T 3nyv_A 340 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRER 419 (484)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHH
Confidence 99999999999999999955554 4566666 788999999999999999999999988766544456678
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
++.+|+.||+|+||+|+.+||+.+|...+. ++++++++|..+|.|+||.|+|+||+++|.+.
T Consensus 420 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 420 LERAFRMFDSDNSGKISSTELATIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 999999999999999999999999987322 78899999999999999999999999999864
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-78 Score=635.20 Aligned_cols=444 Identities=37% Similarity=0.654 Sum_probs=379.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|++.+.||+|+||+||+|.+..+++.||||++.+... .......+.+|+.+++++. ||||+++++++...+.+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 96 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSF 96 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH-BCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCEE
Confidence 466789999999999999999999999999999999865432 2334678899999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++|||||.|++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++..+..+.+||+|||++.....
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999999999999999888999999999999999999999999999999999999997666667899999999988766
Q ss_pred CCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
.......+||+.|+|||++.+.++.++|||||||++|+|++|..||.+......+..+..+...+..+.+..+++++++|
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp C----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred CCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence 65556678999999999999889999999999999999999999999999999999999988888888888899999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccCCCCCCC----cccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHHHHhhHHHH
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASDK----PIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEEEIKGLKTM 405 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~----~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~ 405 (544)
|.+||+.||.+|||+.++|+||||+......+. +.....+.++++|...+++++.++..+...+ +.+++++++++
T Consensus 257 i~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~ 336 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEI 336 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 999999999999999999999999876543321 2234556788899999999999999999877 88999999999
Q ss_pred hcccCCCCCCccCHHHHHHHHHH----hCCCCC----------HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 406 FANMDTDKSGTITYEELKTGLAR----LGSKLS----------ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 406 F~~~D~~~~G~I~~~e~~~~l~~----~~~~~~----------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
|..+|.|+||.|+.+||..++.. +|..++ ..++..+|+.+|.|+||.|+|+||+..+.........
T Consensus 337 F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~ 416 (486)
T 3mwu_A 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSR 416 (486)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCH
T ss_pred HHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchH
Confidence 99999999999999999665554 466555 7889999999999999999999999887766555667
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.++.+|+.||+|+||+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+++|.+-
T Consensus 417 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp HHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 889999999999999999999999999999987 88899999999999999999999999998753
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-78 Score=636.79 Aligned_cols=453 Identities=37% Similarity=0.645 Sum_probs=396.4
Q ss_pred cccCCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEE
Q 009091 83 TVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG 162 (544)
Q Consensus 83 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 162 (544)
.........+.++|++++.||+|+||+||+|.+..++..||+|++.+... .......+.+|+.+++.+. ||||+++++
T Consensus 26 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~ 103 (494)
T 3lij_A 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLD-HPNIMKLYD 103 (494)
T ss_dssp GGCCCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCC-CTTBCCEEE
T ss_pred heeecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHhCC-CCCCCeEEE
Confidence 33444455677889999999999999999999999999999999876443 2233567889999999997 999999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
++...+.+|+|||||+||+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+||
T Consensus 104 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 183 (494)
T 3lij_A 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDF 183 (494)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEEC
Confidence 99999999999999999999999998889999999999999999999999999999999999999977666678999999
Q ss_pred CCcccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
|++............+||+.|+|||++.+.++.++|||||||++|+|++|..||.+......+..+..+...+..+.|..
T Consensus 184 G~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 263 (494)
T 3lij_A 184 GLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263 (494)
T ss_dssp TTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTT
T ss_pred CCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhccc
Confidence 99988776666667789999999999988899999999999999999999999999999999999999988888888888
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC----CCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHH
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA----SDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEE 397 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~----~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~-~~~ 397 (544)
+++.+++||.+||+.||.+|||+.++|+||||++.... ...+.....+..++++...+++++.++..+...+ +++
T Consensus 264 ~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~ 343 (494)
T 3lij_A 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQE 343 (494)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHH
T ss_pred CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHH
Confidence 99999999999999999999999999999999864221 2233445677889999999999999999998877 899
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCC--------CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccccc
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLGS--------KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE 469 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~ 469 (544)
++++++++|..||.|++|.|+.+||..++..++. ..+..++..+|+.+|.|++|.|+|+||+..+.......
T Consensus 344 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~ 423 (494)
T 3lij_A 344 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLL 423 (494)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHT
T ss_pred HHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccc
Confidence 9999999999999999999999999999999854 44578899999999999999999999998876654455
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
..+.++.+|+.||+|+||+|+.+||+.+|...+ .++++++++|..+|.|+||.|+|+||+++|.+..+
T Consensus 424 ~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~-~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 491 (494)
T 3lij_A 424 SKDKLESAFQKFDQDGNGKISVDELASVFGLDH-LESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 491 (494)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHC-CCS-CCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcC-CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhcc
Confidence 678899999999999999999999999987622 26789999999999999999999999999986543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-63 Score=484.80 Aligned_cols=256 Identities=33% Similarity=0.548 Sum_probs=232.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+++|++|+ |||||++++++++++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEE
Confidence 35999999999999999999999999999999998765545556788999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC--
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-- 251 (544)
||||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||| +.++.+||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 45568999999999977532
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
....+.+||+.|||||++. ..|+.++|||||||++|+|++|..||.+.+...++..+..+.+.++. .+++++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~----~~s~~~~d 263 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE----KFFPKARD 263 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----TCCHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc----ccCHHHHH
Confidence 2345679999999999986 46899999999999999999999999999999999999988776543 57999999
Q ss_pred HHHHhcccCcCCCCChhh------hhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAE------VLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~e------ll~hp~f~~~ 357 (544)
||.+||.+||++|||++| |++||||+.-
T Consensus 264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 999999999999999998 5899999764
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-63 Score=490.61 Aligned_cols=260 Identities=30% Similarity=0.548 Sum_probs=229.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..+.|++.++||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.+|+.|+ |||||+++++|.+++.+|
T Consensus 72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ 147 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 147 (346)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 34679999999999999999999999999999999965432 33456889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||||+||+|.+++.. +.+++..++.++.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.+...
T Consensus 148 ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 148 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCCCEEEecCcCceecCCC
Confidence 99999999999998865 5799999999999999999999999999999999999994 4567999999999987543
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
....+.+||+.|||||++. ..|+.++|||||||++|||++|..||.+.+..+.+..+..+.. ...+.+..+++++++
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~d 302 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKG 302 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHHH
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHHH
Confidence 3445689999999999986 5699999999999999999999999999888888888776532 233445578999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
||.+||++||++|||++|+|+||||++...+
T Consensus 303 li~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p 333 (346)
T 4fih_A 303 FLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333 (346)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred HHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence 9999999999999999999999999986543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-62 Score=471.27 Aligned_cols=255 Identities=35% Similarity=0.627 Sum_probs=213.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+|++++ |||||++++++.+++.+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999998766555566778999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||| +|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCc
Confidence 9999 67999999999999999999999999999999999999999999999999 4456799999999988776666
Q ss_pred eecccCCccccCccccccc-C-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLRRS-Y-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
..+.+||+.|||||++.+. | +.++|||||||++|+|++|+.||.+.+...++..+..+...++. .+++++++||
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li 243 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLI 243 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----TSCHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHH
Confidence 6678999999999998753 4 68999999999999999999999998888888888887665542 5799999999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccC
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+||++||++|||++|+|+||||+..
T Consensus 244 ~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHccCChhHCcCHHHHHcCcccccC
Confidence 99999999999999999999999753
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-62 Score=495.68 Aligned_cols=260 Identities=31% Similarity=0.558 Sum_probs=229.9
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+..++|++.++||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.|+ |||||+++++|.+.+.+
T Consensus 148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~ 223 (423)
T 4fie_A 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDEL 223 (423)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT---CSSGGGHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHhCC-CCCCCceEEEEEECCEE
Confidence 34567999999999999999999999999999999996543 234456889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||||+||+|.+++.. +.+++..++.++.||+.||+|||++|||||||||+||||+ .++.|||+|||+|+.+..
T Consensus 224 ~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TTCCEEECCCTTCEECCS
T ss_pred EEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEecCccceECCC
Confidence 999999999999998865 5799999999999999999999999999999999999994 456799999999998754
Q ss_pred C-CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 G-KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
. ....+.+||+.|||||++. ..|+.++|||||||++|||++|..||.+.+....+..+..+.. .....+..++++++
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~ 378 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLK 378 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHHH
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHHH
Confidence 3 3445679999999999986 5699999999999999999999999999988888888776532 23334457899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+||.+||..||.+|||++|+|+||||++...
T Consensus 379 dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 379 GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 9999999999999999999999999998654
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-61 Score=466.46 Aligned_cols=256 Identities=23% Similarity=0.426 Sum_probs=219.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~~~ 170 (544)
+|++.++||+|+||+||+|.+..++..||+|++.+... .....+.+.+|+.+|++|+ |||||+++++|.. ++.+
T Consensus 27 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~ 104 (290)
T 3fpq_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETTEEEE
T ss_pred eEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCCCcEE
Confidence 35888899999999999999999999999999976543 3455678999999999997 9999999999865 3568
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
|||||||+||+|.+++.+.+.+++..++.++.||+.||+|||++| ||||||||+||||+.. ++.+||+|||+|+..
T Consensus 105 ~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~--~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESST--TSCEEECCTTGGGGC
T ss_pred EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECC--CCCEEEEeCcCCEeC
Confidence 999999999999999999999999999999999999999999998 9999999999999532 357999999999864
Q ss_pred cCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCccCCCCcccCCCHHH
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.. ....+.+||+.|||||++.+.|+.++|||||||+||||+||+.||.+.... .+...+..+..+ ......+++++
T Consensus 183 ~~-~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 259 (290)
T 3fpq_A 183 RA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEV 259 (290)
T ss_dssp CT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHH
T ss_pred CC-CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--CCCCccCCHHH
Confidence 43 344567999999999999988999999999999999999999999876544 444555444322 22234578999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++||.+||++||++|||++|+|+||||++.
T Consensus 260 ~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 260 KEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 999999999999999999999999999863
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-62 Score=481.52 Aligned_cols=256 Identities=27% Similarity=0.542 Sum_probs=222.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|++|+ |||||++++++.+++.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEE
Confidence 469999999999999999999999999999999976543 3445678999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+||+|.+++...+ .+++..++.|+.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCCEEEcccccceeecCC
Confidence 99999999999997653 479999999999999999999999999999999999994 4567999999999876543
Q ss_pred C-ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 K-VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
. .....+||+.|||||++.+ .|+.++|||||||+||||++|+.||.+.+..+++..+..+.++. .+..+++++++
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~s~~~~~ 255 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP---VSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CCTTSCHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC---CCccCCHHHHH
Confidence 2 2345689999999999874 69999999999999999999999999999989998988876532 23468999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
||.+||++||.+|||++|+|+||||++.
T Consensus 256 li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 9999999999999999999999999864
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-60 Score=465.09 Aligned_cols=255 Identities=30% Similarity=0.510 Sum_probs=219.5
Q ss_pred ccceecceecccCCeEEEEEEEC---CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
++|++++.||+|+||+||+|++. .+++.||+|++.+.... ......+.+|+.+|++++ |||||++++++.+++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-VRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-EEECC------CCCCCCC-CTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-hHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEE
Confidence 45999999999999999999974 46789999999765432 223346788999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC---
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999 4456799999999986543
Q ss_pred -CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 -GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 -~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.....+.+||+.|||||++. ..|+.++|||||||++|||+||+.||.+.+..+++..+.++...++ ..+|++++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 254 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHH
Confidence 33345679999999999986 5699999999999999999999999999999999999988766544 35899999
Q ss_pred HHHHHhcccCcCCCCCh-----hhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~-----~ell~hp~f~~~ 357 (544)
+||.+||++||++|||+ +|+++||||+.-
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 99999999999999995 799999999863
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-60 Score=465.40 Aligned_cols=256 Identities=24% Similarity=0.334 Sum_probs=221.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++.++||+|+||+||+|+++.+|+.||||++..... ..+|+.+|+.|+ |||||++++++.+++.+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~-HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLS-SPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEE
Confidence 458999999999999999999999999999999965432 246999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+||||+.++ ..+||+|||+|+.+.....
T Consensus 129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS--CCEEECCCTTCEEC-----
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC--CEEEEeeCCCCeEccCCCc
Confidence 99999999999999999999999999999999999999999999999999999995432 2599999999987654321
Q ss_pred ------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 254 ------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 254 ------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
....+||+.|||||++. ..|+.++|||||||+||||++|+.||.+.....++..+......+. ..+..++++
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~ 285 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCAPL 285 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSCHH
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCCHH
Confidence 12358999999999986 4699999999999999999999999998877777777777654332 123468999
Q ss_pred HHHHHHHhcccCcCCCCChhhh-------------hCCCccccCCCCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEV-------------LEHPWMREGGEAS 361 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~el-------------l~hp~f~~~~~~~ 361 (544)
+++||.+||++||.+|||+.|| |+|||+.+..+|.
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~Pr 333 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPR 333 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCCC
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCCC
Confidence 9999999999999999999997 6899998876554
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-58 Score=469.83 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=225.4
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----- 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----- 166 (544)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ......+.+.+|+.+|++|+ |||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCTT
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcC-CCCcceEeeeeecccccc
Confidence 4567999999999999999999999999999999985433 23445577889999999997 9999999998763
Q ss_pred -CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 167 -RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 167 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
.+.+|||||||+ |+|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGla 205 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMA 205 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeeccee
Confidence 367999999996 5899999988999999999999999999999999999999999999999 45567999999999
Q ss_pred ccccCC-----CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC
Q 009091 246 VFIDEG-----KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318 (544)
Q Consensus 246 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 318 (544)
+.+... ....+.+||+.|||||++.+ .++.++||||+||++|||++|+.||.+.+..+.+..|......++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876432 23346799999999998754 47999999999999999999999999998888887776532221110
Q ss_pred -----------------------c----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 319 -----------------------P----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 319 -----------------------~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
+ +..+++++++||.+||.+||.+|||++|+|+||||++...+.+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~~p 358 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 358 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGGSC
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCcccc
Confidence 0 124688999999999999999999999999999999876655443
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-56 Score=436.61 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=198.8
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC------
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ------ 168 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~------ 168 (544)
.|++.+.||+|+||+||+|+++.+++.||||++.... .....+.+.+|+.+|++|+ |||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCcccccc
Confidence 4899999999999999999999999999999986543 3445678899999999997 999999999987543
Q ss_pred ------eEEEEEeccCCCChHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 169 ------SVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 169 ------~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
.+|||||||+||+|.+++.....+ +...++.++.||+.||+|||++||+||||||+||||+ .++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~---~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC---CCCcEEE
Confidence 479999999999999999876553 4567889999999999999999999999999999994 4457999
Q ss_pred eecCCcccccCCCc-------------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HH
Q 009091 240 TDFGLSVFIDEGKV-------------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GI 304 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~ 304 (544)
+|||+|+....... ..+.+||+.|||||++. ..|+.++|||||||++|||++ ||...... ..
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~ 236 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT 236 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH
Confidence 99999987654321 22458999999999986 469999999999999999996 88654322 22
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+..+..... + +.+...++.+.+||.+||++||.+|||+.|+|+||||++..
T Consensus 237 ~~~~~~~~~--p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 287 (299)
T 4g31_A 237 LTDVRNLKF--P-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287 (299)
T ss_dssp HHHHHTTCC--C-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred HHHHhcCCC--C-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence 333333222 1 12234567889999999999999999999999999998754
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-56 Score=444.39 Aligned_cols=257 Identities=27% Similarity=0.468 Sum_probs=210.4
Q ss_pred cccccceecceecccCCeEEEEEEEC---CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.+.++|++++.||+|+||+||+|+++ .+++.||+|++.+. .....+.+|+++|+.+.+||||+++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 45678999999999999999999875 45788999988543 23456889999999997799999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+++|||||||+||+|.+++ +.+++..++.++.||+.||+|||++||+||||||+|||++.+. +.+||+|||+|+.
T Consensus 93 ~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~--~~~kl~DFGla~~ 167 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL--KKYALVDFGLAQG 167 (361)
T ss_dssp TEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT--TEEEECCCTTCEE
T ss_pred CEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC--CeEEECcCCCCcc
Confidence 9999999999999999988 4699999999999999999999999999999999999996432 4799999999976
Q ss_pred ccCCC-----------------------------ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCC
Q 009091 248 IDEGK-----------------------------VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPF 296 (544)
Q Consensus 248 ~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf 296 (544)
..... ...+.+||+.|||||++.+ .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 54321 1234589999999998864 4899999999999999999999999
Q ss_pred CCCCh-HHHHHHHHhC--------------------------------------C------------ccCCCCcccCCCH
Q 009091 297 WAETE-KGIFDAILKG--------------------------------------G------------VDFESEPWLLISD 325 (544)
Q Consensus 297 ~~~~~-~~~~~~i~~~--------------------------------------~------------~~~~~~~~~~~~~ 325 (544)
..... ...+..|... . .......+..+++
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 76543 2333332210 0 0001123456799
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+++|||.+||.+||++|+|++|+|+||||++.
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 99999999999999999999999999999874
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-56 Score=434.84 Aligned_cols=251 Identities=23% Similarity=0.390 Sum_probs=214.7
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.|.+.+.||+|+||+||+|++. .++..||||++... .....+.|.+|+++|++|+ |||||+++++|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCC
Confidence 46899999999999999999875 35788999998542 3455678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHc-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
.+|||||||++|+|.++|... ..+++..+..++.||+.||.|||+++|+||||||+|||| +.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCCC
Confidence 999999999999999999764 358999999999999999999999999999999999999 4456
Q ss_pred cEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHh
Q 009091 236 MLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILK 310 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~ 310 (544)
.+||+|||+|+........ ....||+.|||||++. +.|+.++|||||||+||||+| |+.||.+.+..+++..+..
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~ 245 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 8999999999876543322 2346999999999986 679999999999999999998 8999999998888888887
Q ss_pred CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 311 GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+.... .+..+++++.+||.+||+.||++|||+++| ++|+++
T Consensus 246 ~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~ 286 (299)
T 4asz_A 246 GRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN 286 (299)
T ss_dssp TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred CCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence 65422 223689999999999999999999999998 456654
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-56 Score=470.47 Aligned_cols=265 Identities=34% Similarity=0.641 Sum_probs=240.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++++.||+|+||+||+|.++.+|+.||+|++.... ....+.+.+|+.+|+.|+ |||||+++++|.+.+.+|
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEE
Confidence 4567999999999999999999999999999999986532 345677899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+ ..+.+||+|||+|+.+..
T Consensus 231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECCT
T ss_pred EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEccC
Confidence 99999999999999865 4679999999999999999999999999999999999999653 235799999999999887
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......+||+.|||||++. ..|+.++|||||||++|||++|..||.+....+.+..+......++...+..+++++++
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 389 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 77777889999999999986 45899999999999999999999999999999999999988888777777789999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
||.+||..||.+|||+.|+|+||||+....+.
T Consensus 390 li~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~ 421 (573)
T 3uto_A 390 FIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421 (573)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred HHHHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence 99999999999999999999999999876543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-55 Score=432.24 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=207.1
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.+.+.++||+|+||+||+|+++ .++..||||++... .....+.|.+|+.+|++|+ |||||+++++|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECC
Confidence 45888999999999999999865 36789999998542 3455678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQ---------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
.+|||||||++|+|.+++... +.+++..+..|+.||+.||.|||+++||||||||+||||+ .
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~---~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---Q 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---T
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC---C
Confidence 999999999999999999753 3589999999999999999999999999999999999994 4
Q ss_pred CccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 009091 234 GAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i 308 (544)
++.+||+|||+|+...... .....+||+.|||||++. ..|+.++|||||||+||||+| |+.||.+.+..+.+..+
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i 273 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 5689999999998765432 223467999999999886 569999999999999999999 89999999888888888
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..+.. .+. ...+++++.+||.+||+.||++|||+.||+++
T Consensus 274 ~~g~~-~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 274 TQGRE-LER--PRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp HHTCC-CCC--CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred HcCCC-CCC--cccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 77642 222 23689999999999999999999999999753
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-55 Score=427.33 Aligned_cols=250 Identities=22% Similarity=0.373 Sum_probs=204.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.++++++||+|+||+||+|++. ..||||++.... ......+.|.+|+.+|++++ |||||++++++.. +.++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEC-CeEEE
Confidence 345889999999999999999865 359999885433 34455678999999999997 9999999998865 56899
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||||+||+|.++|... ..+++..+..|+.||+.||+|||+++||||||||+||||+ .++.+||+|||+|+.....
T Consensus 109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSCBC----
T ss_pred EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEEeeccCceecccC
Confidence 99999999999999764 5799999999999999999999999999999999999994 5568999999999876432
Q ss_pred ---CceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC--CCcccC
Q 009091 252 ---KVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE--SEPWLL 322 (544)
Q Consensus 252 ---~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~ 322 (544)
......+||+.|||||++. +.|+.++|||||||+||||+||+.||.+.+....+..+.......+ ...+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 265 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN 265 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence 2234568999999999985 3489999999999999999999999988766655555444433222 123346
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++++.+||.+||+.||.+|||+.+++++
T Consensus 266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 266 CPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp SCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 89999999999999999999999987543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-55 Score=461.09 Aligned_cols=254 Identities=29% Similarity=0.462 Sum_probs=218.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHH---HHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE---IQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E---~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+| +.+++.+. |||||+++++|.+.+.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-CCCEeEEEEEEEECCEE
Confidence 459999999999999999999999999999999977654433444445555 45555565 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||||+||+|.++|...+.+++..++.|+.||+.||+|||++|||||||||+|||| +.++.|||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999 5556899999999988765
Q ss_pred CCceecccCCccccCccccc-c-cCCCcchHHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-R-SYGKEIDVWSAGVILYILLSGVPPFWAET---EKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~~l~el~tg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.. ..+.+||+.|||||++. + .|+.++|||||||+||||++|..||.+.. ...+...+......++ ..+|+
T Consensus 345 ~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~~~S~ 419 (689)
T 3v5w_A 345 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSP 419 (689)
T ss_dssp CC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred CC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----ccCCH
Confidence 43 34679999999999985 3 59999999999999999999999997643 2344555665554443 35899
Q ss_pred HHHHHHHHhcccCcCCCCC-----hhhhhCCCcccc
Q 009091 326 SAKDLVRKMLIQDPKKRIT-----SAEVLEHPWMRE 356 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~ 356 (544)
++++||.+||++||.+|++ ++||++||||+.
T Consensus 420 ~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence 9999999999999999998 699999999985
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-55 Score=426.67 Aligned_cols=249 Identities=20% Similarity=0.301 Sum_probs=212.9
Q ss_pred ccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
..+++.++||+|+||+||+|... .+++.||||++.... .....+.|.+|+.+|++|+ |||||+++++|..++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCC-CCCCCCcceEEEECC
Confidence 34788999999999999999863 467889999985432 3445678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD 232 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~ 232 (544)
.++||||||++|+|.++|... ..+++..+..++.||+.||.|||+++||||||||+|||| +
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl---~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV---Y 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---C
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---C
Confidence 999999999999999999653 358999999999999999999999999999999999999 4
Q ss_pred CCccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 009091 233 GGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDA 307 (544)
Q Consensus 233 ~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~ 307 (544)
.++.+||+|||+|+...... .....+||+.|||||++. +.|+.++|||||||+||||+| |..||.+.+..++...
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~ 259 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 55689999999998764332 233468999999999885 679999999999999999998 8999999998888888
Q ss_pred HHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 308 ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 308 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+..+... +. ...+++++.+||.+||+.||.+|||+.||+++
T Consensus 260 i~~~~~~-~~--p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 260 IRNRQVL-PC--PDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHTTCCC-CC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCC-CC--cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 8766432 22 23689999999999999999999999999764
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-53 Score=430.59 Aligned_cols=300 Identities=35% Similarity=0.689 Sum_probs=264.0
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|++.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~ 102 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESF 102 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCE
Confidence 3456789999999999999999999999999999999865433 3445677899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
.|+||||++||+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+|||++....
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999999999888889999999999999999999999999999999999999766555679999999998877
Q ss_pred CCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++.+.+..+++++.
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 262 (362)
T 2bdw_A 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262 (362)
T ss_dssp TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHH
T ss_pred CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 6555556789999999999864 689999999999999999999999999988888999998888888887888999999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIA 391 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 391 (544)
+||.+||+.||.+|||+.++|+||||..................+++|...++++..++..+.
T Consensus 263 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 325 (362)
T 2bdw_A 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMI 325 (362)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997643333333345667788888888888887765554
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-54 Score=430.79 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=210.4
Q ss_pred cccceecceecccCCeEEEEEEECCCC-----CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTG-----NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED- 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 166 (544)
.++|++++.||+|+||+||+|.+..++ +.||||++.... .....+.+.+|+.+|.++.+|||||+++++|..
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 567999999999999999999976543 579999885432 334467799999999999877999999999976
Q ss_pred CCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~ 230 (544)
.+.++||||||++|+|.++|... ..+++..+..++.||+.||+|||+++||||||||+|||++
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~- 219 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 219 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC-
Confidence 45789999999999999999763 3478999999999999999999999999999999999994
Q ss_pred CCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHH
Q 009091 231 KDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305 (544)
Q Consensus 231 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~ 305 (544)
.++.+||+|||+|+.+..... ....+||+.|||||++. +.|+.++|||||||+||||+| |..||.+......+
T Consensus 220 --~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~ 297 (353)
T 4ase_A 220 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297 (353)
T ss_dssp --GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred --CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 456899999999987654332 23467999999999886 569999999999999999998 89999887654444
Q ss_pred HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 306 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..++.....++.+ ..+++++.+||.+||+.||++|||+.+|++|
T Consensus 298 ~~~i~~g~~~~~p--~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 298 CRRLKEGTRMRAP--DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCCCC--ccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 4444333333333 3579999999999999999999999999987
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-54 Score=443.49 Aligned_cols=299 Identities=39% Similarity=0.720 Sum_probs=261.0
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|++++.||+|+||+||+|.+..++..+|+|++..... .....+.+.+|+.+++.+. ||||+++++++.+.+.
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLK-HPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCC-BTTBCCEEEEEECSSE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CcCCCeEEEEEEECCE
Confidence 3456789999999999999999999999999999999876543 2344667899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
.++||||++||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++....++.+||+|||++....
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999765556789999999998765
Q ss_pred CCC-ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 250 EGK-VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 250 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++.+.+..+++++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 244 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 432 2345689999999999865 68999999999999999999999999999999999999998888888888899999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHH
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~ 390 (544)
++||.+||+.||.+|||+.|+|+||||+..............+..+++|...++++..+...+
T Consensus 245 ~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~ 307 (444)
T 3soa_A 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307 (444)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999865333333334667788888888888887766544
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=415.10 Aligned_cols=296 Identities=38% Similarity=0.678 Sum_probs=236.2
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
....+.++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+.+++++. ||||+++++++...
T Consensus 47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 120 (349)
T 2w4o_A 47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETP 120 (349)
T ss_dssp BCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCC-CTTBCCEEEEEECS
T ss_pred ccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCC-CCCCcceeeeEecC
Confidence 34556788999999999999999999999999999999986432 3456789999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+.+++||||+++++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++..+.++.+||+|||++..
T Consensus 121 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp SEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred CeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999999999998888899999999999999999999999999999999999997644567899999999987
Q ss_pred ccCCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHhCCccCCCCcccCCCH
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
..........+||+.|+|||++.+ .++.++|||||||++|+|++|..||....... .+..+......+..+.+..++.
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCH
Confidence 765544556789999999999864 58999999999999999999999998765544 6667777666666565667899
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIA 391 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 391 (544)
++.+||.+||+.||.+|||+.++|+||||+....... .......+++++....+++.......+
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFV--HMDTAQKKLQEFNARRKLKAAVKAVVA 344 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCS--CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccCCCccchh--hhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987643322 235666778888888888777655443
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=410.11 Aligned_cols=258 Identities=37% Similarity=0.609 Sum_probs=232.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..+|..||||++.+... .....+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEE
Confidence 4569999999999999999999999999999999866443 3455677889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++|++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSSC
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCCC
Confidence 99999999999999998999999999999999999999999999999999999999 455679999999998877666
Q ss_pred ceecccCCccccCccccccc-C-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLRRS-Y-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
.....+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.........+..+....+. .+++++.+|
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~l 244 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENL 244 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHH
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHHH
Confidence 66678999999999998643 4 47899999999999999999999999988888888887665543 479999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
|.+||..||.+|||++++|+||||+....
T Consensus 245 i~~~L~~dP~~R~t~~eil~h~~~~~~~~ 273 (328)
T 3fe3_A 245 LKRFLVLNPIKRGTLEQIMKDRWINAGHE 273 (328)
T ss_dssp HHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred HHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence 99999999999999999999999987654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-52 Score=417.64 Aligned_cols=267 Identities=40% Similarity=0.693 Sum_probs=238.9
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---hcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..+.++|++++.||+|+||.||+|.++.+|..||+|++.+...... ...+.+.+|+.+++.+. ||||+++++++..
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEe
Confidence 3566789999999999999999999999999999999976543221 24678999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-CccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~-~~~vkl~Dfg~a 245 (544)
.+.+++||||++||+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||+...+. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999999988888999999999999999999999999999999999999965432 236999999999
Q ss_pred ccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
............+||+.|+|||++. ..++.++|||||||++|+|++|..||.+....+.+..+......++...+..++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 246 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence 9877665556778999999999986 468999999999999999999999999999989999998887777666667789
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.+++||.+||..||.+|||+.++|+||||+..
T Consensus 247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 999999999999999999999999999999753
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-52 Score=418.29 Aligned_cols=298 Identities=35% Similarity=0.632 Sum_probs=242.9
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC--hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN--KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.+.++|++.+.||+|+||+||+|.+..+++.||||++....... ....+.+.+|+.+++.+. ||||+++++++...+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 45678999999999999999999999999999999986543221 224678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
.+|||||||+|++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++....+||+|||+
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999998887653 3489999999999999999999999999999999999997766566799999999
Q ss_pred cccccCCCc-eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 245 SVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 245 a~~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
+........ ....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+. .......+..+........+..
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCcccccc
Confidence 987765432 34568999999999986 45899999999999999999999999874 4556677777766655555567
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHH
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~ 390 (544)
+++++++||.+||..||.+|||+.++|+||||++................++++...++++......+
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 326 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAV 326 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC---------
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999875332222223455667777777777766655444
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-51 Score=413.20 Aligned_cols=257 Identities=29% Similarity=0.523 Sum_probs=226.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+++.+.+||||+++++++...+.+|||
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997654444556677889999999987799999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~ 252 (544)
|||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC---
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCCc
Confidence 9999999999999998899999999999999999999999999999999999999 455679999999998643 233
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||.+.....++..+..+...++. .+++.+.+||
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li 255 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGIL 255 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHH
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHH
Confidence 445678999999999986 45999999999999999999999999999999999999888766543 4799999999
Q ss_pred HHhcccCcCCCCCh------hhhhCCCccccC
Q 009091 332 RKMLIQDPKKRITS------AEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rps~------~ell~hp~f~~~ 357 (544)
.+||+.||.+||++ +++++||||+..
T Consensus 256 ~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 99999999999999 899999999864
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=421.76 Aligned_cols=261 Identities=34% Similarity=0.603 Sum_probs=216.8
Q ss_pred ccccceec-ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 009091 92 IRQFYTLG-KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED---- 166 (544)
Q Consensus 92 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 166 (544)
+.+.|.+. +.||+|+||+||+|.+..++..||||++.. ...+.+|+.++.++.+||||+++++++..
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--------chhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 33446665 789999999999999999999999998842 13567899998777679999999999875
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
.+.+|||||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 567999999999999999998753 599999999999999999999999999999999999997654467899999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH----HHHHHHHhCCccCCCCc
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK----GIFDAILKGGVDFESEP 319 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~ 319 (544)
+............+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.... .....+..+...++.+.
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~ 290 (400)
T 1nxk_A 211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 290 (400)
T ss_dssp CEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTT
T ss_pred ccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcc
Confidence 98776555556678999999999986 56899999999999999999999999775432 35566777777777777
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
+..+++++.+||.+||+.||.+|||+.++|+||||......
T Consensus 291 ~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~ 331 (400)
T 1nxk_A 291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331 (400)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTS
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCC
Confidence 77899999999999999999999999999999999876443
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-51 Score=411.81 Aligned_cols=258 Identities=33% Similarity=0.527 Sum_probs=208.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+.+++.+. ||||+++++++...+.+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA----AIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST----TSCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc----cccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEEE
Confidence 456999999999999999999999999999999986532 22356889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.. ....+||+|||++.......
T Consensus 94 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 94 IMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC-------
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccccccccC
Confidence 99999999999999988899999999999999999999999999999999999999543 23359999999998654444
Q ss_pred ceecccCCccccCccccc-ccCCCc-chHHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHhCCccCCCCcccCCCHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKE-IDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~-~DiwslG~~l~el~tg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.....+||+.|+|||++. ..++.+ +|||||||++|+|++|+.||.+... ......+......++ ....+++.
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~ 250 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--DDIRISPE 250 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--TTSCCCHH
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--CcCCCCHH
Confidence 445668999999999885 445444 8999999999999999999987544 334445554444333 33357999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.+||.+||..||.+|||+.++++||||.+..
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred HHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 99999999999999999999999999997653
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=410.67 Aligned_cols=263 Identities=29% Similarity=0.592 Sum_probs=236.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|++++.||+|+||.||+|.+..++..||+|++... ......+.+|+.+++.+. ||||+++++++.+.+.+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 76 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIAR-HRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCEE
Confidence 3567799999999999999999999999999999988532 334567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||++|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.. .++.+||+|||++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECC
Confidence 99999999999999997653 69999999999999999999999999999999999999642 24689999999999887
Q ss_pred CCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++...+..+++++.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHH
Confidence 6666667789999999999865 478999999999999999999999999999899999988887776666677899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+||.+||..||.+|||+.|+|+||||++...
T Consensus 236 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 266 (321)
T 1tki_A 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIE 266 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred HHHHHHcCCChhHCcCHHHHhcChhhccCcc
Confidence 9999999999999999999999999987644
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=405.23 Aligned_cols=256 Identities=32% Similarity=0.546 Sum_probs=229.1
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999997654434455678889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~ 252 (544)
|||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 445689999999998643 333
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||.+.........+......++. .+++++++||
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li 236 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHH
Confidence 445678999999999986 46899999999999999999999999998888888888877665543 5799999999
Q ss_pred HHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 332 RKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
.+||+.||.+|| +++++++||||+..
T Consensus 237 ~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 999999999999 89999999999753
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-51 Score=409.08 Aligned_cols=267 Identities=39% Similarity=0.712 Sum_probs=236.1
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC---hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN---KQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..+.++|.+.+.||+|+||.||+|.+..++..||+|++.+..... ....+.+.+|+.+++++. ||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 346678999999999999999999999999999999997654322 124678999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC-CCccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~-~~~~vkl~Dfg~a 245 (544)
.+.+++||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999999998888899999999999999999999999999999999999996543 2337999999999
Q ss_pred ccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+......++...+..++
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence 8876555555678999999999986 568999999999999999999999999988888888887776665555556789
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 246 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999999999999999999999999999999764
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-51 Score=396.58 Aligned_cols=269 Identities=41% Similarity=0.735 Sum_probs=241.7
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|++.+.||+|+||.||+|.+..++..+|+|++.... ....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (277)
T 3f3z_A 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF---VEDVDRFKQEIEIMKSLD-HPNIIRLYETFEDNTD 80 (277)
T ss_dssp -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc---cchHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCe
Confidence 456788999999999999999999999999999999986543 234678899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
.++||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+..++.+..+||+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999999999999988899999999999999999999999999999999999999665566789999999998877
Q ss_pred CCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.........||+.|+|||++.+.++.++||||||+++|+|++|..||...........+..+...++...+..+++.+.+
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES 240 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHH
T ss_pred CccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHH
Confidence 66666677899999999999888999999999999999999999999998888888888888776665555578999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
||.+||+.||.+|||+.++|+||||++.....+
T Consensus 241 li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~ 273 (277)
T 3f3z_A 241 LIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273 (277)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTSHHHHHHHCCSG
T ss_pred HHHHHccCChhhCcCHHHHhcCHHHhccccccc
Confidence 999999999999999999999999987654433
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=409.97 Aligned_cols=257 Identities=27% Similarity=0.491 Sum_probs=222.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|..++.++.+||||+++++++...+.+|||
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 45999999999999999999999999999999998765544555567889999999886699999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc-cCCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~ 252 (544)
|||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.. ....
T Consensus 132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCCC
Confidence 9999999999999998899999999999999999999999999999999999999 45568999999999863 3344
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCC---------ChHHHHHHHHhCCccCCCCcccC
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAE---------TEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||... ....+...+......++. .
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~ 284 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----S 284 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT----T
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC----c
Confidence 456679999999999986 46899999999999999999999999643 223455666666555443 4
Q ss_pred CCHHHHHHHHHhcccCcCCCCCh------hhhhCCCccccC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITS------AEVLEHPWMREG 357 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~------~ell~hp~f~~~ 357 (544)
+++++++||.+||+.||.+||++ +++++||||+..
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 79999999999999999999996 799999999753
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-50 Score=390.54 Aligned_cols=268 Identities=37% Similarity=0.737 Sum_probs=241.8
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|++.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++++. ||||+++++++...+..
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCEE
Confidence 355779999999999999999999999999999999865443 3445677889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||+++++|.+.+.....+++..+..++.|++.||.|||+.||+||||||+|||++.++....+||+|||++.....
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999999999999999888999999999999999999999999999999999999997766666799999999988776
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
........||+.|+|||++. ..++.++||||||+++|+|++|..||...........+..+....+.+.+..+++++.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence 55556678999999999886 45899999999999999999999999999888888888888887777777788999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
||.+||+.||.+|||+.++|+||||+.....
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 9999999999999999999999999876543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=404.03 Aligned_cols=257 Identities=28% Similarity=0.470 Sum_probs=228.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+.+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+||||+++++++.+.+.+|+|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997654333445677889999999885699999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~ 252 (544)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.... ..
T Consensus 97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 4456899999999986432 23
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||.+.....++..+......++ ..+++++++||
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 249 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 249 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHHHH
Confidence 345678999999999886 4589999999999999999999999999988888888887765443 24799999999
Q ss_pred HHhcccCcCCCCChh-hhhCCCccccC
Q 009091 332 RKMLIQDPKKRITSA-EVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~-ell~hp~f~~~ 357 (544)
.+||..||.+||++. ++++||||+..
T Consensus 250 ~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 250 VKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHHhcCCHhHcCCChHHHHcCccccCC
Confidence 999999999999998 99999999864
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-50 Score=397.47 Aligned_cols=254 Identities=29% Similarity=0.583 Sum_probs=228.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||+|++..+|+.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+.+.+|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997654433445677889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCCc--
Confidence 9999999999999998899999999999999999999999999999999999999 45568999999999876542
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....+||+.|+|||++. ..++.++|||||||++|||++|..||........+..+......++. .+++++.+||.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~ 235 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLS 235 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHHH
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHHHHH
Confidence 34568999999999886 46899999999999999999999999998888888888887665543 57999999999
Q ss_pred HhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 333 KMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+||..||.+|| +++++++||||+..
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 99999999999 89999999999753
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-51 Score=399.19 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=190.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ---- 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 168 (544)
.++|.+.+.||+|+||+||+|++ +|+.||||++.... ........|+..+.+++ |||||++++++..++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCC-CCCCCcEEEEEEecCCCce
Confidence 35689999999999999999987 48899999984321 11222345666667787 999999999997653
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCEeecCCCCceeeecCCCCccEEEe
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM--------GVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.+|||||||+||+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||| +.++.+||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEE
Confidence 68999999999999999976 4689999999999999999999987 99999999999999 555689999
Q ss_pred ecCCcccccCCCc-----eecccCCccccCcccccc-------cCCCcchHHHHHHHHHHHhhCCCCCCCC---------
Q 009091 241 DFGLSVFIDEGKV-----YRDIVGSAYYVAPEVLRR-------SYGKEIDVWSAGVILYILLSGVPPFWAE--------- 299 (544)
Q Consensus 241 Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~~l~el~tg~~pf~~~--------- 299 (544)
|||+|+....... ....+||+.|||||++.+ .++.++|||||||+||||+||..||...
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 9999987654322 124589999999999864 3577899999999999999997765321
Q ss_pred ------ChHHHHHHHHhCCccCCCCccc---CCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 300 ------TEKGIFDAILKGGVDFESEPWL---LISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 300 ------~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
........+.........+... ..++.+.+||.+||+.||++|||+.||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1223344444444333322211 12357889999999999999999999874
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=397.08 Aligned_cols=267 Identities=36% Similarity=0.658 Sum_probs=213.8
Q ss_pred ccceec---ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLG---KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~---~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
++|.+. +.||+|+||.||+|.+..+++.||||++.+ .....+.+|+.+++.+.+||||+++++++.+.+..
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG------GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh------hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 456664 789999999999999999999999999853 23467789999999998899999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++....+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp EEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999999999999999988999999999999999999999999999999999999998766566899999999986544
Q ss_pred C-CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHhCCccCCCCccc
Q 009091 251 G-KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET-------EKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 251 ~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~ 321 (544)
. ......+||+.|+|||++. ..++.++|||||||++|+|++|..||.... .......+..+...+..+.+.
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence 3 2334567899999999986 458999999999999999999999997643 345667777777766666666
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCccc
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~ 366 (544)
.+++++++||.+||..||.+|||++++++||||+........+..
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~~~ 286 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLM 286 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSCCS
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCCCC
Confidence 789999999999999999999999999999999987665555543
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-50 Score=405.85 Aligned_cols=255 Identities=27% Similarity=0.519 Sum_probs=216.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHH-HhccCCCCeeEEEEEEEeCCeEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM-QHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+.|++.+.||+|+||+||+|+++.++..||+|++.+...........+.+|..++ +.+. ||||+++++++...+.+|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC-CTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCEEEE
Confidence 4599999999999999999999999999999999776554444556677787774 5565 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~ 251 (544)
||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccCC
Confidence 99999999999999988899999999999999999999999999999999999999 455689999999998643 33
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......+||+.|+|||++. ..++.++|||||||++|||++|..||.+....+.+..+......++. .+++.+++|
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~l 269 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP----NITNSARHL 269 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS----SSCHHHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC----CCCHHHHHH
Confidence 3445678999999999986 45899999999999999999999999998888888888887655432 579999999
Q ss_pred HHHhcccCcCCCCCh----hhhhCCCcccc
Q 009091 331 VRKMLIQDPKKRITS----AEVLEHPWMRE 356 (544)
Q Consensus 331 i~~~l~~dp~~Rps~----~ell~hp~f~~ 356 (544)
|.+||+.||.+||++ .++++||||+.
T Consensus 270 i~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 270 LEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp HHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred HHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 999999999999997 58999999975
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=390.17 Aligned_cols=262 Identities=32% Similarity=0.595 Sum_probs=224.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|.+.+.||+|+||.||+|.+..++..+|+|++.... .....+.+.+|+.+++++. ||||+++++++...+..
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 95 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNM 95 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCC-CchHHhHHHheecCCeE
Confidence 35577999999999999999999999999999999986543 2345678899999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 171 HLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||+...+..+.+||+|||++.
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999999998854 3679999999999999999999999999999999999999765556789999999998
Q ss_pred cccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
............||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+......+... ...+++.
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 254 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQ 254 (285)
T ss_dssp C----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCCHH
T ss_pred ecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCCHH
Confidence 776655555678999999999998889999999999999999999999999888777776666554443322 2247899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+.+||.+||+.||.+|||+.|+|+||||++
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 999999999999999999999999999985
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=398.78 Aligned_cols=257 Identities=28% Similarity=0.487 Sum_probs=224.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|+.+++++.+||||+++++++...+.+|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999998766555566778889999999986699999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~ 252 (544)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCCC
Confidence 9999999999999988899999999999999999999999999999999999999 455689999999998643 333
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCC---------ChHHHHHHHHhCCccCCCCcccC
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAE---------TEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||... ........+......++. .
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~ 241 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----S 241 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT----T
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC----C
Confidence 445678999999999886 46899999999999999999999999752 233455666666554432 5
Q ss_pred CCHHHHHHHHHhcccCcCCCCCh------hhhhCCCccccC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITS------AEVLEHPWMREG 357 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~------~ell~hp~f~~~ 357 (544)
++.++++||.+||+.||.+||++ +++++||||+..
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 79999999999999999999996 799999999753
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-50 Score=403.03 Aligned_cols=256 Identities=27% Similarity=0.496 Sum_probs=228.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|..++..+.+||||+++++++...+.+|+|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 45999999999999999999999999999999997654434455677889999999886799999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CCC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~ 252 (544)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ...
T Consensus 100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCCc
Confidence 9999999999999988899999999999999999999999999999999999999 455689999999998643 333
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....+||+.|+|||++. ..++.++|||||||++|||++|..||.+.....++..+......++. .+++++.+||
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li 252 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAIC 252 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHH
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHHHH
Confidence 445678999999999886 56899999999999999999999999999888889998887665543 5799999999
Q ss_pred HHhcccCcCCCCC-----hhhhhCCCcccc
Q 009091 332 RKMLIQDPKKRIT-----SAEVLEHPWMRE 356 (544)
Q Consensus 332 ~~~l~~dp~~Rps-----~~ell~hp~f~~ 356 (544)
.+||..||.+||+ ++++++||||+.
T Consensus 253 ~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 253 KGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp HHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 9999999999995 599999999975
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-50 Score=406.00 Aligned_cols=263 Identities=31% Similarity=0.621 Sum_probs=234.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+|+.+|+.+. ||||+++++++...+.++
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~ 124 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMV 124 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCEEE
Confidence 4567999999999999999999999999999999985432 334567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||++|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.. ..+.+||+|||++.....
T Consensus 125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNP 203 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCceEEEecccceecCC
Confidence 9999999999999887654 69999999999999999999999999999999999999542 335799999999998776
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......+||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+......+....+..+++++.+
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 204 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred CcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 65556678999999999986 45899999999999999999999999998888888888887776666666678999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
||.+||+.||.+|||+.++|+||||+....
T Consensus 284 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 999999999999999999999999987643
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=412.33 Aligned_cols=260 Identities=31% Similarity=0.492 Sum_probs=227.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||+||+|+++.++..||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+.+.+||
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEE
Confidence 457999999999999999999999999999999997643333333455789999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 147 V~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp EECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTS
T ss_pred EEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccCC
Confidence 9999999999998865 579999999999999999999999999999999999999 455689999999998776543
Q ss_pred c--eecccCCccccCccccccc-----CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 253 V--YRDIVGSAYYVAPEVLRRS-----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 253 ~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
. ....+||+.|+|||++.+. ++.++|||||||++|||++|..||.+......+..+......+..+.+..+++
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~ 302 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK 302 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCH
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccH
Confidence 2 2357899999999988532 78899999999999999999999999998888888877654444444457899
Q ss_pred HHHHHHHHhcccCcCC--CCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKK--RITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~ 357 (544)
++++||.+||..+|.+ ||+++|+++||||+..
T Consensus 303 ~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 303 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 9999999999999998 9999999999999874
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=401.20 Aligned_cols=261 Identities=36% Similarity=0.615 Sum_probs=229.1
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.+.|++.+.||+|+||.||+|.++.+++.||+|++.+... ...+|++++.++.+||||+++++++.+.+.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 90 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKY 90 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence 3456789999999999999999999999999999999865431 234688999998679999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-CccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~-~~~vkl~Dfg~a~~~ 248 (544)
+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+. ...+||+|||++...
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999999999998889999999999999999999999999999999999999865432 356999999999876
Q ss_pred cCC-CceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCC---CChHHHHHHHHhCCccCCCCcccCC
Q 009091 249 DEG-KVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWA---ETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 249 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. ....+++..+..+...+....+..+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 250 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence 543 33445689999999999864 488999999999999999999999986 3456678888888887777777789
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++++++||.+||..||.+|||+.++|+||||...
T Consensus 251 s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999999999999999999999999999754
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-51 Score=405.76 Aligned_cols=256 Identities=34% Similarity=0.588 Sum_probs=221.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEE
Confidence 356999999999999999999999999999999997654333344567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+ +|+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.......
T Consensus 87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCCc
Confidence 99999 77999999988899999999999999999999999999999999999999 445679999999998877666
Q ss_pred ceecccCCccccCccccccc-C-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLRRS-Y-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
.....+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.........+....... ...+++.+.+|
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~l 238 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDFLSPGAQSL 238 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC----CTTSCHHHHHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC----cccCCHHHHHH
Confidence 66677899999999998653 3 789999999999999999999998765544333332222222 23579999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|.+||..||.+|||++|+++||||+..
T Consensus 239 i~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHcCCChhHCcCHHHHHhChhhccC
Confidence 999999999999999999999999865
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=388.89 Aligned_cols=259 Identities=29% Similarity=0.488 Sum_probs=223.2
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
...++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+.+++.+. ||||+++++++...+.+
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 92 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 92 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc---ccHHHHHHHHHHHHhcCC-CCCCCeEeEEEEECCEE
Confidence 34567999999999999999999999999999999986543 334567889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||++|++|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 93 WVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCS
T ss_pred EEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCceecCC
Confidence 9999999999999988764 699999999999999999999999999999999999994 445799999999987654
Q ss_pred CC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+....... ......+++.+.
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIFR 247 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHHHH
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHHHH
Confidence 32 334568999999999885 568999999999999999999999998887766665554433222 222346799999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+||.+||+.||.+|||++++|+||||+...
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 277 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence 999999999999999999999999998653
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=399.62 Aligned_cols=253 Identities=32% Similarity=0.571 Sum_probs=228.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+.+.+|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEE
Confidence 45999999999999999999999999999999997655444455678889999999996 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC--
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccCC--
Confidence 9999999999999988899999999999999999999999999999999999999 44568999999999876543
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+..+...++. .+++++.+||.
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~ 270 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TCCHHHHHHHH
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHH
Confidence 24568999999999885 56899999999999999999999999999888888888887665543 57999999999
Q ss_pred HhcccCcCCCCC-----hhhhhCCCcccc
Q 009091 333 KMLIQDPKKRIT-----SAEVLEHPWMRE 356 (544)
Q Consensus 333 ~~l~~dp~~Rps-----~~ell~hp~f~~ 356 (544)
+||+.||.+||+ ++++++||||+.
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred HHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 999999999999 999999999975
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=402.36 Aligned_cols=257 Identities=26% Similarity=0.492 Sum_probs=226.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.+. ||||+++++++.+.+.+|+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEE
Confidence 456999999999999999999999999999999997665444556678899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+.||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCCC
Confidence 99999999999999988899999999999999999999999999999999999999 455689999999999877666
Q ss_pred ceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHhCCccCCCCcccCCCH
Q 009091 253 VYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAET---EKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.....+||+.|+|||++. ..++.++|||||||++|+|++|..||.... .......+......++ ..+++
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s~ 245 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQ 245 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCCH
Confidence 666789999999999985 348999999999999999999999997543 3444555555544433 25799
Q ss_pred HHHHHHHHhcccCcCCCCC-hhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKKRIT-SAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps-~~ell~hp~f~~~ 357 (544)
.+.+||.+||+.||.+||+ ++++++||||+..
T Consensus 246 ~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 9999999999999999998 8999999999753
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=403.32 Aligned_cols=260 Identities=37% Similarity=0.642 Sum_probs=225.0
Q ss_pred ccccee--cceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 93 RQFYTL--GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 93 ~~~y~~--~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
...|.+ .+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.+++++. ||||+++++++...+.+
T Consensus 86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 161 (373)
T 2x4f_A 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDI 161 (373)
T ss_dssp GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEE
T ss_pred ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 344555 678999999999999999999999999986532 345678899999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+|||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+..+ ..+.+||+|||++....
T Consensus 162 ~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR-DAKQIKIIDFGLARRYK 240 (373)
T ss_dssp EEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET-TTTEEEECCCSSCEECC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC-CCCcEEEEeCCCceecC
Confidence 9999999999999988764 469999999999999999999999999999999999999643 34579999999999876
Q ss_pred CCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
........+||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+......++...+..++++++
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 320 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAK 320 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHH
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHH
Confidence 655555668999999999886 4588999999999999999999999999988888888888777666666667899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+||.+||+.||.+|||+.++|+||||+..
T Consensus 321 ~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 321 EFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 99999999999999999999999999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=393.09 Aligned_cols=264 Identities=35% Similarity=0.605 Sum_probs=220.7
Q ss_pred ccccceec-ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 92 IRQFYTLG-KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 92 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.++|++. +.||+|+||+||+|.+..+++.||||++... .......+.+|+.++.++.+||||+++++++...+.+
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC---SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC---cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 45678885 7899999999999999999999999998653 2345678899999999976699999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++....+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999999999888999999999999999999999999999999999999997655545699999999876532
Q ss_pred CC--------ceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---------------
Q 009091 251 GK--------VYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------- 301 (544)
Q Consensus 251 ~~--------~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~--------------- 301 (544)
.. .....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+...
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 11 122456999999999885 3489999999999999999999999976542
Q ss_pred HHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 302 KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 302 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
......+..+...++...+..+++.+++||.+||+.||.+|||++++|+||||+...
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 345666666666555444456899999999999999999999999999999998753
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-50 Score=411.24 Aligned_cols=262 Identities=26% Similarity=0.463 Sum_probs=225.7
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..+. ||||+++++++.+.+.+|
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCEEE
Confidence 3467999999999999999999999999999999996543322333345789999999996 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhccc
Confidence 99999999999999987 5779999999999999999999999999999999999999 5556899999999987654
Q ss_pred CCce--ecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc-cc
Q 009091 251 GKVY--RDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP-WL 321 (544)
Q Consensus 251 ~~~~--~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~ 321 (544)
.... ...+||+.|+|||++. +.++.++|||||||++|||++|..||.+....+.+..+......+..+. ..
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 307 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT 307 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence 3322 3468999999999885 3589999999999999999999999999988888888876433333222 24
Q ss_pred CCCHHHHHHHHHhcccCcCC--CCChhhhhCCCccccC
Q 009091 322 LISDSAKDLVRKMLIQDPKK--RITSAEVLEHPWMREG 357 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~ 357 (544)
.+++++++||++||..+|.+ |++++|+++||||+..
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 58999999999999998888 9999999999999864
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-49 Score=391.90 Aligned_cols=267 Identities=39% Similarity=0.699 Sum_probs=234.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---hcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..+.++|++++.||+|+||.||+|.+..++..||+|++........ ...+.+.+|+.+++++. ||||+++++++..
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYEN 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEec
Confidence 3456789999999999999999999999999999999976543221 24678999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-CccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~-~~~vkl~Dfg~a 245 (544)
.+.+++||||+++++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+|||++.++. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999999998888999999999999999999999999999999999999965431 126999999999
Q ss_pred ccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+......++...+..++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccC
Confidence 8876655555678999999999886 568999999999999999999999999988888888887766555443345689
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 247 ~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp HHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 999999999999999999999999999999754
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-49 Score=393.94 Aligned_cols=272 Identities=31% Similarity=0.571 Sum_probs=234.8
Q ss_pred CCCcccccccceec-ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 86 GKPLEDIRQFYTLG-KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 86 ~~~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
....+.+..+|.+. +.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+.+||||+++++++
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 34456778889887 899999999999999999999999999865432 3445678899999999998789999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
...+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.....+.+||+||
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999999988553 66999999999999999999999999999999999999965444568999999
Q ss_pred CCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
|++.............||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......+..+.+.
T Consensus 179 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 258 (327)
T 3lm5_A 179 GMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS 258 (327)
T ss_dssp GGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTT
T ss_pred ccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhc
Confidence 9998876655555678999999999886 568999999999999999999999999988888888888777777766667
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.+++.+.+||.+||+.||.+|||++++|+||||+...
T Consensus 259 ~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~ 295 (327)
T 3lm5_A 259 SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295 (327)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence 7899999999999999999999999999999998753
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=412.22 Aligned_cols=258 Identities=37% Similarity=0.589 Sum_probs=230.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|.+++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+. ||||+++++++...+.++
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3456999999999999999999999999999999997654333345678899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhcccc
Confidence 999999999999999888889999999999999999999999999999999999999 44557999999999987766
Q ss_pred CceecccCCccccCccccccc--CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
......+||+.|+|||++.+. .+.++|||||||++|+|++|..||.+.........+..+....+ ..+++++.+
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 245 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVIS 245 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHHH
Confidence 666677899999999998754 36899999999999999999999998888888888887755433 247899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
||.+||..||.+|||+.++++||||+..
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 9999999999999999999999999864
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-49 Score=398.68 Aligned_cols=263 Identities=34% Similarity=0.670 Sum_probs=232.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc-C----hhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV-N----KQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++...... . ....+.+.+|+.+++++.+||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 3456799999999999999999999999999999998654311 1 1224567899999999966999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
..+..++||||++|++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFS 247 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCcc
Confidence 999999999999999999999988889999999999999999999999999999999999999 44567999999999
Q ss_pred ccccCCCceecccCCccccCcccccc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLRR-------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 318 (544)
............+||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...+..+
T Consensus 248 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 327 (365)
T 2y7j_A 248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327 (365)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHH
T ss_pred cccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence 88776655566789999999998752 47889999999999999999999999888888888888877766655
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.+..++..+.+||.+||+.||.+|||+.++|+||||++
T Consensus 328 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 56678999999999999999999999999999999974
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=383.88 Aligned_cols=259 Identities=25% Similarity=0.433 Sum_probs=213.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|.+..+++.||+|++.... ........+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-CcCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEE
Confidence 46999999999999999999999999999999996544 23444577889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+++ +|.+.+.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCSCC
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceecCCcc
Confidence 999976 56555554 67799999999999999999999999999999999999994 4557999999999876532
Q ss_pred CceecccCCccccCcccccc-c-CCCcchHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHhCCccCCCC----------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR-S-YGKEIDVWSAGVILYILLSGVPPFW-AETEKGIFDAILKGGVDFESE---------- 318 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~~l~el~tg~~pf~-~~~~~~~~~~i~~~~~~~~~~---------- 318 (544)
.......||+.|+|||++.+ . ++.++|||||||++|+|++|..||. +......+..+..........
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 33345689999999998853 3 7999999999999999999888854 444555555554321111100
Q ss_pred ---------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 319 ---------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 319 ---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
....+++.+++||.+||+.||.+|||++|+|+||||++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence 1124688999999999999999999999999999998753
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=386.53 Aligned_cols=261 Identities=25% Similarity=0.349 Sum_probs=214.2
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
......+.++|++.++||+|+||+||+|.+..+++.||||++.... ...........|+..+.++.+||||+++++++.
T Consensus 49 ~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~ 127 (311)
T 3p1a_A 49 SRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE 127 (311)
T ss_dssp TSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC-CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc-cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE
Confidence 3444556778999999999999999999999999999999875432 233444556677777777756999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+.+++||||+ +++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+
T Consensus 128 ~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~DFG~ 203 (311)
T 3p1a_A 128 EGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGL 203 (311)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---GGGCEEECCCTT
T ss_pred eCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEcccee
Confidence 999999999999 66998888765 4599999999999999999999999999999999999994 445799999999
Q ss_pred cccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
+.............||+.|+|||++.+.++.++|||||||++|||++|..||.... ....+..+.. +......++
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~~--~~~~~~~~~ 278 (311)
T 3p1a_A 204 LVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGYL--PPEFTAGLS 278 (311)
T ss_dssp CEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTCC--CHHHHTTSC
T ss_pred eeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccCC--CcccccCCC
Confidence 98876655555668999999999998899999999999999999999987775432 2333333322 112233579
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
+++.+||.+||+.||.+|||++++|+||||++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 99999999999999999999999999999975
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=404.64 Aligned_cols=260 Identities=26% Similarity=0.457 Sum_probs=222.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++..+. ||||+++++++.+.+.+||
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCEEEE
Confidence 467999999999999999999999999999999996543333334456789999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||++||+|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccCC
Confidence 999999999999998754 79999999999999999999999999999999999999 45568999999999876554
Q ss_pred Cce--ecccCCccccCccccc--------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc-c
Q 009091 252 KVY--RDIVGSAYYVAPEVLR--------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP-W 320 (544)
Q Consensus 252 ~~~--~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~-~ 320 (544)
... ...+||+.|+|||++. ..++.++|||||||++|||++|..||.+....+.+..+.........+. .
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 295 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVD 295 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC---
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccc
Confidence 332 3468999999999885 3589999999999999999999999999888888888775432222221 2
Q ss_pred cCCCHHHHHHHHHhcccCcCCC---CChhhhhCCCccccC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKR---ITSAEVLEHPWMREG 357 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~R---ps~~ell~hp~f~~~ 357 (544)
..+++++++||.+||. +|.+| |+++++++||||+..
T Consensus 296 ~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 296 EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp -CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 3689999999999999 99998 599999999999864
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-49 Score=409.40 Aligned_cols=257 Identities=30% Similarity=0.528 Sum_probs=218.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.+. ||||+++++++...+.++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEEE
Confidence 456999999999999999999999999999999997654444555667889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE- 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~- 250 (544)
||||++|++|.+++...+.+++..++.++.||+.||.|||+ .||+||||||+|||++ .++.+||+|||++.....
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCEEEccCCCceeccCC
Confidence 99999999999999988899999999999999999999998 9999999999999994 445799999999986433
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......+||+.|+|||++. ..++.++|||||||++|||++|..||.+.........+......++. .+++++.+
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~ 378 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 378 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHH
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHHH
Confidence 33345678999999999885 56899999999999999999999999999888888888877665543 47999999
Q ss_pred HHHHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
||.+||+.||.+|| +++++|+||||+..
T Consensus 379 li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 99999999999999 99999999999864
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=389.24 Aligned_cols=263 Identities=33% Similarity=0.498 Sum_probs=232.0
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|.+++.||+|+||.||+|.+..++..||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+.+.++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 3467999999999999999999999999999999997665555566788999999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCCCEEEeeccCceecccC
Confidence 9999999999999998888999999999999999999999999999999999999994 4457999999999876532
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+......++. .+++.+.+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 270 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAAS 270 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT----TSCHHHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCc----cCCHHHHH
Confidence 2334567999999999886 45889999999999999999999999988877777777766554432 57899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
||.+||+.||.+|||++++|+||||+....+..
T Consensus 271 li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~ 303 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 303 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSC
T ss_pred HHHHHccCChhHCcCHHHHhcCccccCCCcccc
Confidence 999999999999999999999999998765543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=385.40 Aligned_cols=264 Identities=25% Similarity=0.369 Sum_probs=215.8
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc--ChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV--NKQDREDIKREIQIMQHLS--GQQNIVEFRGAYED 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~ 166 (544)
.+.++|++.+.||+|+||+||+|.+..+++.||+|++...... .......+.+|+.+++++. +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3456799999999999999999999999999999998654321 1122345678888887775 49999999999987
Q ss_pred CC-----eEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 167 RQ-----SVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 167 ~~-----~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
.. .+++||||+. ++|.+++..... +++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC---TTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEE
Confidence 55 5899999996 599999987654 99999999999999999999999999999999999994 4457999
Q ss_pred eecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC
Q 009091 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 318 (544)
+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+.......+..
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 9999998776655556678999999999885 568999999999999999999999999988877776665422111111
Q ss_pred c-----------------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 319 P-----------------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 319 ~-----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
. ...+++.+.+||.+||++||.+|||+.|+|+||||+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 1 124688999999999999999999999999999998753
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-49 Score=384.77 Aligned_cols=266 Identities=41% Similarity=0.721 Sum_probs=239.6
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCe
Confidence 4456789999999999999999999999999999999865432 3345678899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+++||||+++++|.+.+.....+++..++.++.||+.||.|||+.||+||||||+|||++..+....+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999999999888899999999999999999999999999999999999999766656689999999998776
Q ss_pred CCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.........||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+..+...+..+.+..+++++.+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (287)
T ss_dssp CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHH
T ss_pred CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHH
Confidence 55544556789999999999888999999999999999999999999998888888888888777666666678999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+|.+||..||.+|||+.++|+||||++.
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 9999999999999999999999999865
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=384.54 Aligned_cols=264 Identities=40% Similarity=0.706 Sum_probs=232.2
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++++. ||||+++++++...+.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIK-HENIVTLEDIYESTTHY 81 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCC-CCCeeehhhhcccCCEE
Confidence 45677999999999999999999999999999999986432 223456889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||+++++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+|||+...+..+.+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999999999998888999999999999999999999999999999999999996555567899999999976543
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
. ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+..+...++.+.+..+++.+.+
T Consensus 162 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 240 (304)
T 2jam_A 162 G-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240 (304)
T ss_dssp B-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHH
T ss_pred C-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHH
Confidence 2 233457999999999886 45899999999999999999999999998888888888888777666666678999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
||.+||..||.+|||+.++|+||||+....
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 241 FICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 999999999999999999999999987643
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-48 Score=382.25 Aligned_cols=265 Identities=37% Similarity=0.661 Sum_probs=234.6
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC------hhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN------KQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~------~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||||++....... ....+.+.+|+.+++++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34567999999999999999999999999999999986543111 123466789999999997799999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...+..++||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc---CCCcEEEecccc
Confidence 99999999999999999999999888899999999999999999999999999999999999994 445799999999
Q ss_pred cccccCCCceecccCCccccCccccc-------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 317 (544)
+.............||+.|+|||++. ..++.++||||||+++|+|++|..||...........+..+...++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 98876655556678999999999874 34788999999999999999999999998888888888888777776
Q ss_pred CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 318 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.+..+++.+.+||.+||+.||.+|||+.++|+||||++..
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 66677899999999999999999999999999999998754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=386.89 Aligned_cols=263 Identities=25% Similarity=0.437 Sum_probs=215.0
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.+.+.++|++.+.||+|+||+||+|.+. +++.||+|++.... ........+.+|+.+++++. ||||+++++++...+
T Consensus 16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 92 (311)
T 3niz_A 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELH-HPNIVSLIDVIHSER 92 (311)
T ss_dssp EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCC-CTTBCCEEEEECCSS
T ss_pred ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcC-CCCEeeeeeEEccCC
Confidence 4556778999999999999999999986 58999999986543 22334567889999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.+++||||+++ +|.+.+... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..
T Consensus 93 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 93 CLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARA 168 (311)
T ss_dssp CEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEE
T ss_pred EEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CCCCEEEccCcCcee
Confidence 99999999975 888887764 4599999999999999999999999999999999999994 445799999999987
Q ss_pred ccCC-CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC------
Q 009091 248 IDEG-KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE------ 318 (544)
Q Consensus 248 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~------ 318 (544)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+..........
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 6532 23345689999999998853 58999999999999999999999998877766665554311111100
Q ss_pred --------------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 319 --------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 319 --------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
....+++++.+||.+||++||.+|||++|+|+||||++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 0123678999999999999999999999999999998753
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=411.27 Aligned_cols=262 Identities=28% Similarity=0.406 Sum_probs=198.7
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----- 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----- 166 (544)
+.++|++++.||+|+||+||+|.+..+++.||||++.+. .......+.+.+|+.+|+++. ||||+++++++..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTT
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCC-CCCCCceEEEEecCCccc
Confidence 456799999999999999999999999999999998543 234455678899999999997 9999999999843
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
...+|+||||+ +++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||| +.++.+||+|||+++
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLAR 204 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTCB
T ss_pred CceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccch
Confidence 35799999998 56999999888889999999999999999999999999999999999999 455689999999998
Q ss_pred cccCCC----------------------------ceecccCCccccCcccc-c-ccCCCcchHHHHHHHHHHHhh-----
Q 009091 247 FIDEGK----------------------------VYRDIVGSAYYVAPEVL-R-RSYGKEIDVWSAGVILYILLS----- 291 (544)
Q Consensus 247 ~~~~~~----------------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~~l~el~t----- 291 (544)
...... .....+||+.|+|||++ . ..++.++|||||||++|||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 764221 22346889999999976 3 469999999999999999999
Q ss_pred ------CCCCCCCCCh--------------------HHHHHHHHhC--C--------------------c-c----CCCC
Q 009091 292 ------GVPPFWAETE--------------------KGIFDAILKG--G--------------------V-D----FESE 318 (544)
Q Consensus 292 ------g~~pf~~~~~--------------------~~~~~~i~~~--~--------------------~-~----~~~~ 318 (544)
|+++|.+... ...+..+... . . . ....
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE 364 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGG
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHH
Confidence 6666655331 1111111110 0 0 0 0011
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
.+..+++++.+||.+||..||.+|||++|+|+||||+....
T Consensus 365 ~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 365 RFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 12356899999999999999999999999999999987644
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-49 Score=401.33 Aligned_cols=266 Identities=32% Similarity=0.498 Sum_probs=211.9
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ- 168 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 168 (544)
..+.++|++.+.||+|+||.||+|.+..+++.||||++.+. .........+.+|+.+++++.+||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 34567799999999999999999999999999999998543 2345556778899999999988999999999997544
Q ss_pred -eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 -SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.+|+||||++ ++|..++.. +.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRS 158 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEE
T ss_pred CEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCccccc
Confidence 7999999997 589888876 579999999999999999999999999999999999999 4556799999999986
Q ss_pred ccC----------------------CCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHH
Q 009091 248 IDE----------------------GKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKG 303 (544)
Q Consensus 248 ~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~ 303 (544)
... .......+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 532 112234689999999998854 58999999999999999999999999888777
Q ss_pred HHHHHHhCCccCCC--------------------------------------------CcccCCCHHHHHHHHHhcccCc
Q 009091 304 IFDAILKGGVDFES--------------------------------------------EPWLLISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 304 ~~~~i~~~~~~~~~--------------------------------------------~~~~~~~~~~~~li~~~l~~dp 339 (544)
.+..+..... .+. .+...+++++.+||.+||..||
T Consensus 239 ~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 QLERIIGVID-FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHHC-CCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHhcC-CCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 6666543110 000 0112568899999999999999
Q ss_pred CCCCChhhhhCCCccccCCCCCC
Q 009091 340 KKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 340 ~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
.+|||++|+|+||||+....+..
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~~~~~ 340 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFHNPNE 340 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTCCGGG
T ss_pred ccCCCHHHHhCCHHHHHhcCCcc
Confidence 99999999999999987654433
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=379.73 Aligned_cols=259 Identities=32% Similarity=0.617 Sum_probs=224.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++++.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++++. ||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEEE
Confidence 456999999999999999999999999999999986654433445677899999999998 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+++++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.......
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCccc
Confidence 99999999999999988899999999999999999999999999999999999999 445579999999986554332
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....||+.|+|||++. ..++.++||||||+++|+|++|..||...........+......++. .+++.+.+||
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li 238 (279)
T 3fdn_A 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLI 238 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT----TSCHHHHHHH
T ss_pred -ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCC----cCCHHHHHHH
Confidence 24568999999999886 45789999999999999999999999988888888777766554432 4789999999
Q ss_pred HHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
.+||+.||.+|||+.++|+||||+.....
T Consensus 239 ~~~l~~~p~~Rps~~e~l~h~~~~~~~~~ 267 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREVLEHPWITANSSK 267 (279)
T ss_dssp HHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred HHHhccChhhCCCHHHHhhCccccCCccC
Confidence 99999999999999999999999876543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-48 Score=387.48 Aligned_cols=257 Identities=32% Similarity=0.562 Sum_probs=214.5
Q ss_pred cccceecceecccCCeEEEEEEEC---CCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.++|++.+.||+|+||.||+|++. .++..||+|++.+.... .......+.+|+.+++.+. ||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCC
Confidence 456999999999999999999985 68999999998654322 2234456789999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQGHVKLTDFGLCKES 171 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTSCEEECCCSCC---
T ss_pred EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCCcEEEEeCCccccc
Confidence 9999999999999999999888999999999999999999999999999999999999994 4557999999999764
Q ss_pred cC-CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 249 DE-GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 249 ~~-~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.. .......+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+......++. .++++
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~ 247 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQE 247 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT----TSCHH
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHH
Confidence 33 23334568999999999885 56899999999999999999999999998888888888877655442 47899
Q ss_pred HHHHHHHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+++||.+||..||.+|| ++.++++||||+..
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999999999999999 88899999999753
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=389.11 Aligned_cols=258 Identities=31% Similarity=0.524 Sum_probs=216.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||+||+|.+..+++.||+|++..... ....+.+.+|+.+++.+. ||||+++++++...+..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEEE
Confidence 4569999999999999999999999999999999864432 223466889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++|++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECEETT
T ss_pred EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CCCCEEEEEeeccceeccCC
Confidence 999999999999998888899999999999999999999999999999999999994 44579999999998654322
Q ss_pred ---ceecccCCccccCcccccc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHhCCccCCCCcccCCCHH
Q 009091 253 ---VYRDIVGSAYYVAPEVLRR-S-YGKEIDVWSAGVILYILLSGVPPFWAETEKGI-FDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 253 ---~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.....+||+.|+|||++.+ . ++.++|||||||++|+|++|..||........ ......... ..+++..+++.
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 237 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKIDSA 237 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--TSTTGGGSCHH
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--cCCccccCCHH
Confidence 2235689999999999864 3 47789999999999999999999987655432 333333222 22345578999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+.+||.+||..||.+|||+.|+++||||+...
T Consensus 238 ~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 238 PLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 99999999999999999999999999998653
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-49 Score=391.19 Aligned_cols=263 Identities=27% Similarity=0.449 Sum_probs=212.4
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||+||+|.+..+++.||||++.... ........+.+|+.+++++. ||||+++++++...+.++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCC-CTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc-cccccchhHHHHHHHHHHcC-CCCcceEEEEEecCCEEE
Confidence 3456999999999999999999999999999999986543 22333456779999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC--CCccEEEeecCCccccc
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--GGAMLKATDFGLSVFID 249 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--~~~~vkl~Dfg~a~~~~ 249 (544)
|||||+++ +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++....
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 99999975 9999999988999999999999999999999999999999999999996432 34569999999998765
Q ss_pred CC-CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc------
Q 009091 250 EG-KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW------ 320 (544)
Q Consensus 250 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~------ 320 (544)
.. .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+...........+
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 32 23345678999999998864 4899999999999999999999999988877766665542111111100
Q ss_pred --------------------cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 321 --------------------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 321 --------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..+++++.+||.+||+.||.+|||++|+|+||||+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 1167899999999999999999999999999999875
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=384.14 Aligned_cols=257 Identities=29% Similarity=0.550 Sum_probs=214.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----------------------hhcHHHHHHHHHHHH
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----------------------KQDREDIKREIQIMQ 149 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~ 149 (544)
.++|++.+.||+|+||.||+|.+..+++.||||++.+..... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 356999999999999999999999999999999986543211 112356889999999
Q ss_pred hccCCCCeeEEEEEEEe--CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCcee
Q 009091 150 HLSGQQNIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227 (544)
Q Consensus 150 ~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nil 227 (544)
++. ||||+++++++.. .+.+++||||+++++|.+++ ..+.+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 92 ~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 92 KLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL 169 (298)
T ss_dssp TCC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred hCC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 997 9999999999986 57899999999999998754 3457999999999999999999999999999999999999
Q ss_pred eecCCCCccEEEeecCCcccccCCC-ceecccCCccccCccccccc----CCCcchHHHHHHHHHHHhhCCCCCCCCChH
Q 009091 228 LSNKDGGAMLKATDFGLSVFIDEGK-VYRDIVGSAYYVAPEVLRRS----YGKEIDVWSAGVILYILLSGVPPFWAETEK 302 (544)
Q Consensus 228 l~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~~l~el~tg~~pf~~~~~~ 302 (544)
++ .++.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||......
T Consensus 170 ~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 170 VG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp EC---TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EC---CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 94 44579999999998765432 33456899999999998643 367899999999999999999999988777
Q ss_pred HHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 303 GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 303 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.....+......++. ...+++.+.+||.+||+.||.+|||+.++|+||||++
T Consensus 247 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 247 CLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 777777666554433 3468999999999999999999999999999999963
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-49 Score=406.32 Aligned_cols=265 Identities=37% Similarity=0.661 Sum_probs=218.5
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----hhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----KQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.+.++|.+.+.||+|+||+||+|.+..++..||||++.+..... ......+.+|+.+|+++. ||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC-CTTBCCCCEEEE
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC-CCCEeeEEEEEe
Confidence 35678999999999999999999999999999999997654321 112235789999999997 999999999985
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
.+.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+|||++
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred -cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 4568999999999999999988888999999999999999999999999999999999999977666678999999999
Q ss_pred ccccCCCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCccCCCCcc
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPW 320 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 320 (544)
............+||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+...+....+
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~ 369 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhh
Confidence 9877665556778999999999874 45788999999999999999999999765443 345556666555544445
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..+++.+.+||.+||+.||.+|||++++|+||||++.
T Consensus 370 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 6789999999999999999999999999999999753
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-49 Score=395.41 Aligned_cols=271 Identities=36% Similarity=0.602 Sum_probs=230.9
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc--ChhcHHHHHHHHHHHHhccCCCCeeEEEEE
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV--NKQDREDIKREIQIMQHLSGQQNIVEFRGA 163 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 163 (544)
+.....+.++|++.+.||+|+||.||+|.+..++..||+|++.+.... .....+.+.+|+.++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~ 96 (345)
T 3hko_A 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEV 96 (345)
T ss_dssp CBCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred CchhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC-CCCcceeehh
Confidence 344567788999999999999999999999999999999998654321 2345678899999999997 9999999999
Q ss_pred EEeCCeEEEEEeccCCCChHHHHHH----------------------------------------cCCCCHHHHHHHHHH
Q 009091 164 YEDRQSVHLVMELCSGGELFDKIIA----------------------------------------QGHYTEKAAAALCRA 203 (544)
Q Consensus 164 ~~~~~~~~lv~e~~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~~~~q 203 (544)
+.+.+..++||||++||+|.+++.. ...+++..++.++.|
T Consensus 97 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 176 (345)
T 3hko_A 97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ 176 (345)
T ss_dssp EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence 9999999999999999999998742 011357788999999
Q ss_pred HHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-----ceecccCCccccCccccc---ccCCC
Q 009091 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-----VYRDIVGSAYYVAPEVLR---RSYGK 275 (544)
Q Consensus 204 l~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~ 275 (544)
|+.||.|||+.||+||||||+|||++.+ ....+||+|||++....... ......||+.|+|||++. ..++.
T Consensus 177 i~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 177 IFSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 9999999999999999999999999643 23479999999998654311 123567999999999885 46899
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 276 ~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
++|||||||++|+|++|..||.+.........+......+..+.+..+++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~ 335 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhc
Confidence 99999999999999999999999998888888888877777776677899999999999999999999999999999998
Q ss_pred cCC
Q 009091 356 EGG 358 (544)
Q Consensus 356 ~~~ 358 (544)
...
T Consensus 336 ~~~ 338 (345)
T 3hko_A 336 QFS 338 (345)
T ss_dssp TTS
T ss_pred cCh
Confidence 764
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=413.00 Aligned_cols=256 Identities=30% Similarity=0.545 Sum_probs=224.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||.||+|.+..+|..||+|++.+...........+.+|+.+|+.+. ||||+++++++.+.+.+||
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCEEEE
Confidence 456999999999999999999999999999999997654444445677889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||++||+|.+++...+. +++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceeccc
Confidence 9999999999999987544 9999999999999999999999999999999999999 4556899999999998776
Q ss_pred CCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHhCCccCCCCcccCCCH
Q 009091 251 GKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAET----EKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.......+||+.|+|||++.+ .++.++|||||||++|||++|..||.... ...+...+......++ ..+++
T Consensus 339 ~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s~ 414 (576)
T 2acx_A 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFSP 414 (576)
T ss_dssp TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCCH
Confidence 655666799999999999864 68999999999999999999999998753 2344555554433332 35799
Q ss_pred HHHHHHHHhcccCcCCCC-----ChhhhhCCCcccc
Q 009091 326 SAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMRE 356 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~ 356 (544)
++++||.+||+.||.+|| +++|+++||||+.
T Consensus 415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 999999999999999999 7899999999986
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-48 Score=384.88 Aligned_cols=260 Identities=24% Similarity=0.403 Sum_probs=205.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|.+..++..||+|++.... .......+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCeEEEE
Confidence 45999999999999999999999999999999986543 2333467889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 174 MELCSGGELFDKIIAQ------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
|||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCCEEECcCcccee
Confidence 99997 5999988764 3589999999999999999999999999999999999994 445799999999987
Q ss_pred ccCC-CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC-------
Q 009091 248 IDEG-KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES------- 317 (544)
Q Consensus 248 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~------- 317 (544)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+.........
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 6532 23345689999999999864 5899999999999999999999999988887776666432110000
Q ss_pred -----------------------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 318 -----------------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 318 -----------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
.....+++++.+||.+||+.||.+|||++++|+||||++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 0012468899999999999999999999999999999986543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=380.89 Aligned_cols=257 Identities=30% Similarity=0.457 Sum_probs=211.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|.+ .+++.||+|++..... .......+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcC-CCCEeeeeeEEccCCeEEEE
Confidence 4699999999999999999998 5789999999865432 2233467889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+++ +|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEeECccccccCccc
Confidence 999976 999988764 6799999999999999999999999999999999999994 4557999999999876432
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC------------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES------------ 317 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~------------ 317 (544)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+.........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 22344578999999998853 4899999999999999999999999988777666655432110000
Q ss_pred ---------C----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 318 ---------E----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 318 ---------~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
. ....+++++.+||.+||+.||.+|||++++|+||||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0 012478899999999999999999999999999999864
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=376.12 Aligned_cols=265 Identities=33% Similarity=0.501 Sum_probs=232.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|.+++.||+|+||.||+|.+..++..+|+|++...........+.+.+|+.+++.+. ||||+++++++...+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCEEE
Confidence 3467999999999999999999999999999999997665555566778899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCCEEEEeccCceecccC
Confidence 9999999999999998888999999999999999999999999999999999999994 4557999999999876532
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+.......+. .+++.+.+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 244 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAAS 244 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT----TSCHHHHH
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCcc----ccCHHHHH
Confidence 2334567999999999886 45889999999999999999999999988877777777666544332 57899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
+|.+||+.||.+|||++++++||||+....+...+
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~~~~ 279 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 279 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCC
T ss_pred HHHHHcccChhhCcCHHHHhhChheecCCcCCCCC
Confidence 99999999999999999999999999876655443
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=393.99 Aligned_cols=262 Identities=19% Similarity=0.298 Sum_probs=215.5
Q ss_pred cccceecceeccc--CCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 93 RQFYTLGKELGRG--QFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G--~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.++|++++.||+| +||+||+|.+..+++.||||++..... .....+.+.+|+.+++.+. ||||+++++++...+.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEE
Confidence 4569999999999 999999999999999999999976442 3455677889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 171 HLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCGGGCEEC
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccccceee
Confidence 9999999999999999876 6799999999999999999999999999999999999994 4557999999988654
Q ss_pred cCC--------CceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC--
Q 009091 249 DEG--------KVYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF-- 315 (544)
Q Consensus 249 ~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~-- 315 (544)
... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 321 11123479999999999864 58999999999999999999999998766554443332221110
Q ss_pred ----------------------------------------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 316 ----------------------------------------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 316 ----------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
..+....+++.+.+||.+||+.||.+|||++|+|+||||+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~ 338 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence 0112235788999999999999999999999999999998
Q ss_pred cCCC
Q 009091 356 EGGE 359 (544)
Q Consensus 356 ~~~~ 359 (544)
....
T Consensus 339 ~~~~ 342 (389)
T 3gni_B 339 QIKR 342 (389)
T ss_dssp GC--
T ss_pred HHhh
Confidence 7644
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=378.78 Aligned_cols=265 Identities=40% Similarity=0.720 Sum_probs=228.2
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.++|++.+.||+|+||.||+|.+..+++.||+|++........ ...+.+.+|+.+++++. ||||+++++++...+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKT 81 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCC
Confidence 44679999999999999999999999999999999876543221 24678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC-CCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~-~~~~vkl~Dfg~a~~ 247 (544)
..++||||+++++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++ ....+||+|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999998888899999999999999999999999999999999999996543 234799999999987
Q ss_pred ccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
...........||+.|+|||++. ..++.++||||||+++|+|++|..||...........+......+....+..+++.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHH
Confidence 76655555668999999999886 56899999999999999999999999998888877777766555444444567999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.+||.+||..||.+|||+.++|+||||+..
T Consensus 242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 9999999999999999999999999999865
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=420.21 Aligned_cols=258 Identities=27% Similarity=0.484 Sum_probs=231.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++++.||+|+||.||+|.++.+++.||||++.+.........+.+..|..++..+.+||+|+.+++++...+.+||
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 35699999999999999999999999999999999765443444567788999999998779999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc-CC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~ 251 (544)
||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++... ..
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCC
Confidence 99999999999999998899999999999999999999999999999999999999 455689999999998643 33
Q ss_pred CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......+||+.|+|||++. ..|+.++|||||||+||||++|..||.+....+++..+......++. .+++++++|
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~l 572 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAI 572 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT----TSCHHHHHH
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHHHH
Confidence 3445678999999999986 56899999999999999999999999999999999999988766553 579999999
Q ss_pred HHHhcccCcCCCCCh-----hhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRITS-----AEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rps~-----~ell~hp~f~~~ 357 (544)
|.+||+.||.+||++ ++|++||||+..
T Consensus 573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 999999999999998 999999999753
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=388.14 Aligned_cols=264 Identities=38% Similarity=0.669 Sum_probs=221.1
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc-----ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV-----NKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++++. ||||+++++++.
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~ 85 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC-CTTBCCEEEEEE
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC-CCCCceEeeEEc
Confidence 3557799999999999999999999999999999998654321 1122345789999999997 999999999987
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
..+ +++||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+|||++
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred CCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 655 8999999999999999988888999999999999999999999999999999999999976665667999999999
Q ss_pred ccccCCCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCccCCCCcc
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPW 320 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 320 (544)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+...+....+
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh
Confidence 8876654445568999999999873 45889999999999999999999999765443 344555555544433334
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
..+++.+.+||.+||..||.+|||+.++|+||||+.
T Consensus 245 ~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 568999999999999999999999999999999975
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-48 Score=392.75 Aligned_cols=258 Identities=26% Similarity=0.451 Sum_probs=215.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC-CCCeeEEEEEEEeCCeEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG-QQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~~~~~~ 171 (544)
.+.|++++.||+|+||+||+|.+.. +..||||++..... .....+.+.+|+.+|+++.+ ||||+++++++...+.+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 4569999999999999999999865 89999999865432 34556788999999999974 699999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||| +.+++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+.. +.+||+|||++......
T Consensus 133 lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS----SCEEECCCSSSCCC---
T ss_pred EEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC----CeEEEEecCccccccCC
Confidence 9999 557899999999889999999999999999999999999999999999999942 46999999999876543
Q ss_pred C---ceecccCCccccCcccccc------------cCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHhCCccC
Q 009091 252 K---VYRDIVGSAYYVAPEVLRR------------SYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDF 315 (544)
Q Consensus 252 ~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~~~~~~~ 315 (544)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+..+.......
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 287 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence 2 2235689999999998853 588899999999999999999999987543 34455555544443
Q ss_pred CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 316 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
..+. ..+.++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 288 ~~~~--~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 329 (390)
T 2zmd_A 288 EFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329 (390)
T ss_dssp CCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC-
T ss_pred CCCc--cchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCc
Confidence 3332 35789999999999999999999999999999986543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=375.62 Aligned_cols=259 Identities=32% Similarity=0.635 Sum_probs=227.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||.||+|.+..++..||+|++.............+.+|+.+++++. ||||+++++++...+..++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCEEEEE
Confidence 56999999999999999999999999999999986654333344577899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~~~~~- 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGWSVHAPSLR- 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECSSSC-
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEEecccccccCcccc-
Confidence 99999999999999888899999999999999999999999999999999999994 44579999999987654432
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....|++.|+|||++. ..++.++||||||+++|+|++|..||...........+......++ ..+++.++++|.
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~ 244 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLIS 244 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHH
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHHHH
Confidence 34568999999999886 4589999999999999999999999998888777777776654433 257899999999
Q ss_pred HhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 333 KMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
+||..||.+|||++++++||||+......
T Consensus 245 ~~l~~~p~~Rps~~~ll~h~~~~~~~~~~ 273 (284)
T 2vgo_A 245 KLLRYHPPQRLPLKGVMEHPWVKANSRRV 273 (284)
T ss_dssp HHSCSSGGGSCCHHHHHTCHHHHHHCCCC
T ss_pred HHhhcCHhhCCCHHHHhhCHHHHhhcccc
Confidence 99999999999999999999998765443
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=380.27 Aligned_cols=261 Identities=28% Similarity=0.508 Sum_probs=214.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|.+..++..||+|++.... ......+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEEE
Confidence 56999999999999999999999999999999886543 23344567889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-C
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-K 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~ 252 (544)
|||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++...... .
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECC----
T ss_pred EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCCEEEeeCCCchhccCccc
Confidence 99999999999888888899999999999999999999999999999999999994 4557999999999876532 2
Q ss_pred ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC------------------
Q 009091 253 VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG------------------ 312 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~------------------ 312 (544)
......||+.|+|||++. ..++.++||||||+++|+|++|..||.+.........+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 334568999999999885 458999999999999999999999998887766554443210
Q ss_pred -ccCCCC--------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 313 -VDFESE--------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 313 -~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
...+.+ ....+++.+.+||.+||+.||.+|||++++|+||||+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 011111 01357889999999999999999999999999999987643
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=374.03 Aligned_cols=259 Identities=37% Similarity=0.583 Sum_probs=218.9
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+. ||||+++++++...+..+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 87 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDFF 87 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeEE
Confidence 4467999999999999999999999999999999986654333445678899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGGGCCCC-
T ss_pred EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEEEeecccccccCCC
Confidence 9999999999999999888899999999999999999999999999999999999994 4457999999999887665
Q ss_pred CceecccCCccccCccccccc-C-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLRRS-Y-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......||+.|+|||++.+. + +.++||||||+++|+|++|..||...........+..+....+ ..++..+.+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 240 (276)
T 2h6d_A 165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVAT 240 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHHH
Confidence 555566899999999998754 3 5789999999999999999999998888777777776654433 246899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+|.+||+.||.+|||+.++++||||++..
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 99999999999999999999999998753
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-48 Score=403.70 Aligned_cols=261 Identities=26% Similarity=0.407 Sum_probs=210.1
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR-- 167 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 167 (544)
..+.++|++++.||+|+||+||+|.+..+++.||||++.+. .........+.+|+.+|+.+. ||||+++++++...
T Consensus 58 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~ 135 (464)
T 3ttj_A 58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKT 135 (464)
T ss_dssp EEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCS
T ss_pred eeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCC-CCCCCcEEEEEccCCc
Confidence 34567899999999999999999999999999999998654 234455678889999999997 99999999999654
Q ss_pred ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 168 ----QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 168 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
..+||||||+++ +|.+.+. ..+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||
T Consensus 136 ~~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG 209 (464)
T 3ttj_A 136 LEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFG 209 (464)
T ss_dssp TTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCC
T ss_pred cccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEE
Confidence 468999999976 5666653 359999999999999999999999999999999999999 445679999999
Q ss_pred CcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC-------
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF------- 315 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~------- 315 (544)
+++...........+||+.|+|||++. ..|+.++|||||||++|||++|+.||.+......+..+.......
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 998876655556779999999999875 469999999999999999999999999887766666554321100
Q ss_pred ---------------CCCccc----------------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 316 ---------------ESEPWL----------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 316 ---------------~~~~~~----------------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
....+. ..++++++||.+||..||.+|||++|+|+||||+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 363 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence 000000 0146789999999999999999999999999998654
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=392.51 Aligned_cols=266 Identities=25% Similarity=0.410 Sum_probs=214.6
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
....+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++++. ||||+++++++...
T Consensus 19 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~ 96 (367)
T 1cm8_A 19 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPD 96 (367)
T ss_dssp SEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSC
T ss_pred ceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecC
Confidence 34456778999999999999999999999999999999885432 33445677889999999997 99999999999765
Q ss_pred ------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 168 ------QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 168 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~D 171 (367)
T 1cm8_A 97 ETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILD 171 (367)
T ss_dssp SSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECC
T ss_pred CccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc---CCCCEEEEe
Confidence 3469999999 7899998876 5799999999999999999999999999999999999994 456799999
Q ss_pred cCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC----
Q 009091 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF---- 315 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~---- 315 (544)
||+++..... ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+.......
T Consensus 172 fg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 172 FGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249 (367)
T ss_dssp CTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred eecccccccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9999876542 345689999999998754 68999999999999999999999999887766665554321110
Q ss_pred -------------------CCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 316 -------------------ESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 316 -------------------~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
... ....+++.+.+||.+||..||.+|||++++|+||||++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~ 319 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 319 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCcc
Confidence 011 11346899999999999999999999999999999998765443
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-47 Score=372.20 Aligned_cols=258 Identities=23% Similarity=0.424 Sum_probs=218.5
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~ 168 (544)
.++|++.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++++. ||||+++++++.. ..
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCc
Confidence 3458999999999999999999999999999999865443 3455678899999999997 9999999999865 45
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
.+++||||+++++|.+++...+.+++..++.++.||+.||.|||+.| |+||||||+|||++. ..+.+||+|||++.
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGG
T ss_pred eEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCCcc
Confidence 68999999999999999998888999999999999999999999999 999999999999952 33579999999997
Q ss_pred cccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHhCCccCCCCcccCCCH
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
..... ......||+.|+|||++.+.++.++|||||||++|+|++|..||....... ....+..+... .......++
T Consensus 181 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 257 (290)
T 1t4h_A 181 LKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIP 257 (290)
T ss_dssp GCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCH
T ss_pred ccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--cccCCCCCH
Confidence 65443 334568999999999998889999999999999999999999998755444 34444333221 122235678
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++.+||.+||+.||.+|||+.++|+||||++.
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 99999999999999999999999999999864
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=384.19 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=221.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
...+.|.+.+.||+|+||+||+|.+..++..||||++...........+.+.+|+.+++++. ||||+++++++...+..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 129 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTA 129 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCeE
Confidence 34566999999999999999999999999999999986544333444567899999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+|||||+. |+|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSS
T ss_pred EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCceecC
Confidence 99999997 588887754 56799999999999999999999999999999999999995 44589999999998764
Q ss_pred CCCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.. ....||+.|+|||++. +.++.++|||||||++|||++|..||.+.........+..+..... ....+++
T Consensus 206 ~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 280 (348)
T 1u5q_A 206 PA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSE 280 (348)
T ss_dssp SB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCH
T ss_pred CC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCCH
Confidence 32 3468999999999873 4689999999999999999999999998877776666665543322 2235789
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.+.+||.+||+.||.+|||++++|+||||....
T Consensus 281 ~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 999999999999999999999999999997653
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=389.57 Aligned_cols=262 Identities=26% Similarity=0.397 Sum_probs=210.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|.+..++..||+|++..... ......+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEE
Confidence 459999999999999999999999999999999854321 111123457999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 174 MELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||+++ +|.+++...+ .+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEEECC----
T ss_pred eccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEEccCcccccccCCc
Confidence 999974 8988887754 589999999999999999999999999999999999994 4457999999999865432
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc----------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP---------- 319 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~---------- 319 (544)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+...........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 23344578999999998854 589999999999999999999999999888777666654211111111
Q ss_pred ----------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 320 ----------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 320 ----------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
...+++++.+||.+||+.||.+|||++|+|+||||........
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 293 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH 293 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccc
Confidence 1246889999999999999999999999999999988755433
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=387.41 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=218.7
Q ss_pred CCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc----CCCCeeEEEE
Q 009091 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS----GQQNIVEFRG 162 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~ 162 (544)
.....+.++|++.+.||+|+||+||+|.+..+++.||||++.. .......+..|+.+++.+. +||||+++++
T Consensus 28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN----IKKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc----chhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 4455667889999999999999999999999999999999853 2344566788999999986 5999999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC---------
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK--------- 231 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~--------- 231 (544)
++...+.+++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~ 182 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITV 182 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccch
Confidence 999999999999999 889999998754 49999999999999999999999999999999999999541
Q ss_pred -------------CCCccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCC
Q 009091 232 -------------DGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFW 297 (544)
Q Consensus 232 -------------~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~ 297 (544)
.....+||+|||++...... .....||+.|+|||++. ..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp ECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred hcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 12467999999999865442 24568999999999875 568999999999999999999999998
Q ss_pred CCChHHHHHHHHhCCccCCCC------------------------c------------------ccCCCHHHHHHHHHhc
Q 009091 298 AETEKGIFDAILKGGVDFESE------------------------P------------------WLLISDSAKDLVRKML 335 (544)
Q Consensus 298 ~~~~~~~~~~i~~~~~~~~~~------------------------~------------------~~~~~~~~~~li~~~l 335 (544)
.......+..+.......+.. . ....++.+.+||.+||
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 340 (360)
T 3llt_A 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL 340 (360)
T ss_dssp CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence 887766665554322211100 0 0012477889999999
Q ss_pred ccCcCCCCChhhhhCCCccc
Q 009091 336 IQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 336 ~~dp~~Rps~~ell~hp~f~ 355 (544)
+.||.+|||++|+|+||||+
T Consensus 341 ~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 341 QIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp CSSGGGSCCHHHHTTSGGGC
T ss_pred cCChhhCCCHHHHhcCcccC
Confidence 99999999999999999995
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=380.26 Aligned_cols=255 Identities=28% Similarity=0.495 Sum_probs=212.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~ 170 (544)
.++|++++.||+|+||+||+|.+..+++.||+|++.. ...+.+.+|+.+++++.+||||+++++++.. ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP------VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS------CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc------cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 4679999999999999999999999999999998843 2356788999999999889999999999987 6789
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++||||+++++|.+++. .+++..++.++.||+.||.|||++||+||||||+|||++.++ ..+||+|||++.....
T Consensus 109 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~--~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCCTTCEECCT
T ss_pred EEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC--CEEEEEeCCCceEcCC
Confidence 99999999999988773 489999999999999999999999999999999999996433 3799999999987766
Q ss_pred CCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHH-------------HHhCCcc
Q 009091 251 GKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDA-------------ILKGGVD 314 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~-------------i~~~~~~ 314 (544)
........||+.|+|||++. ..++.++|||||||++|+|++|..||...... ..+.. +......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 55556678999999999875 45899999999999999999999999654322 22211 1111111
Q ss_pred C--------------------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 315 F--------------------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 315 ~--------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
. .......+++++.+||.+||++||.+|||++|+|+||||+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 1 0111223789999999999999999999999999999998754
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-47 Score=376.26 Aligned_cols=255 Identities=29% Similarity=0.545 Sum_probs=220.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|...+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++++. ||||+++++++...+..++||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 121 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVLM 121 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 4777889999999999999999999999999985432 345677889999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-c
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-V 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~ 253 (544)
||++|++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++....... .
T Consensus 122 e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~~ 197 (321)
T 2c30_A 122 EFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVPK 197 (321)
T ss_dssp CCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSSSCC
T ss_pred ecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeeeeecccCccc
Confidence 99999999998754 5799999999999999999999999999999999999994 44579999999998765432 3
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
.....||+.|+|||++. ..++.++|||||||++|+|++|..||...........+....... ......+++.+.+||.
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~ 276 (321)
T 2c30_A 198 RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LKNSHKVSPVLRDFLE 276 (321)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-CTTGGGSCHHHHHHHH
T ss_pred cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-cCccccCCHHHHHHHH
Confidence 34568999999999886 458999999999999999999999999888777776666543322 2223457899999999
Q ss_pred HhcccCcCCCCChhhhhCCCccccCC
Q 009091 333 KMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+||+.||.+|||+.++|+||||....
T Consensus 277 ~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 277 RMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHccCChhhCcCHHHHhcChhhccCC
Confidence 99999999999999999999998754
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=401.41 Aligned_cols=257 Identities=30% Similarity=0.520 Sum_probs=223.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|.+.+.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.+++++. ||||+++++++...+.+|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCEEEE
Confidence 356999999999999999999999999999999997655444455678889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 173 VMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||||++||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeec
Confidence 99999999999998764 369999999999999999999999999999999999999 45568999999999877
Q ss_pred cCCCc-eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGKV-YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAET----EKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.. ...+...+......++ ..
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~ 415 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DK 415 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----TT
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----cc
Confidence 55432 334689999999999864 58999999999999999999999998753 3456666666655443 35
Q ss_pred CCHHHHHHHHHhcccCcCCCCC-----hhhhhCCCccccC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
+++.+++||.+||+.||.+||+ ++++++||||+..
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 7999999999999999999996 4889999999863
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=384.17 Aligned_cols=264 Identities=27% Similarity=0.424 Sum_probs=218.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED------ 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------ 166 (544)
..+|++.+.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.+++.+. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhcc-CCCcccHhheeeccccccc
Confidence 4569999999999999999999999999999998865432 2333456789999999997 9999999999876
Q ss_pred --CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 167 --RQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 167 --~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
.+.+++||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCT
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCCEEEccch
Confidence 4578999999975 777777654 5699999999999999999999999999999999999994 44579999999
Q ss_pred CcccccCC-----CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC
Q 009091 244 LSVFIDEG-----KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316 (544)
Q Consensus 244 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~ 316 (544)
++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.......+
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 99876421 22345678999999998853 489999999999999999999999999888777666654322222
Q ss_pred CCcccC----------------------------CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 317 SEPWLL----------------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 317 ~~~~~~----------------------------~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
...+.. .++.+.+||.+||+.||.+|||++|+|+||||+....+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 323 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence 222111 2678999999999999999999999999999998765544
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-48 Score=385.99 Aligned_cols=254 Identities=29% Similarity=0.514 Sum_probs=217.8
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh-----hcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-----QDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.+.++|++.+.||+|+||+||+|.+..++..||||++........ .....+.+|+.+++++. ||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~ 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFE 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe
Confidence 456789999999999999999999999999999999976543221 13345678999999997 999999999999
Q ss_pred eCCeEEEEEeccCCC-ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 166 DRQSVHLVMELCSGG-ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+.+++||||+.+| +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~ 176 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGS 176 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTT
T ss_pred eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCCcEEEeeccc
Confidence 999999999999766 9999999888899999999999999999999999999999999999994 456799999999
Q ss_pred cccccCCCceecccCCccccCcccccc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLRR-SY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
+............+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||..... .... .......
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~----~~~~~~~ 246 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA----AIHPPYL 246 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT----CCCCSSC
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh----ccCCCcc
Confidence 998776666667789999999998864 33 7889999999999999999999975322 1111 1122235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+++++.+||.+||+.||.+|||++++|+||||+...
T Consensus 247 ~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 799999999999999999999999999999998754
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=372.50 Aligned_cols=258 Identities=29% Similarity=0.516 Sum_probs=197.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC-CTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC-CCCeEeEEEEEccCCeEEE
Confidence 356999999999999999999999999999999986544333344578899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEEeecceeeccCC
Confidence 99999999999999875 5699999999999999999999999999999999999994 4457999999999876532
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+....... ...++.++.+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 241 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM----PSFLSIEAKD 241 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCC----CTTSCHHHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCC----ccccCHHHHH
Confidence 2223467999999999886 458899999999999999999999998766555444433332222 2357899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
||.+||..||.+|||++++|+||||....
T Consensus 242 li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999999999999999999999998654
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=385.54 Aligned_cols=264 Identities=25% Similarity=0.346 Sum_probs=219.7
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ- 168 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 168 (544)
..+.++|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+.+++++. ||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETP 86 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC-CTTBCCEEEEEEEEET
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC-CCCcceEEEeeeccCC
Confidence 345677999999999999999999999999999999997654445555678899999999997 999999999987543
Q ss_pred ---eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 169 ---SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 169 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
..|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~a 163 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIA 163 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET---TSCEEECCCSCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcC---CCCEEEeeccCc
Confidence 45999999999999999998889999999999999999999999999999999999999954 347999999999
Q ss_pred ccccCCC----ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 246 VFIDEGK----VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 246 ~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
....... ......||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+.......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHS
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccccc
Confidence 8764422 223457999999999886 46899999999999999999999999988887776666665444333333
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..+++++.++|.+||+.||.+||++.++|.|+|++..
T Consensus 244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999753
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=398.40 Aligned_cols=262 Identities=27% Similarity=0.412 Sum_probs=211.3
Q ss_pred CCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
...+....+|++.+.||+|+||+||+|.+..++. +|+|++..... ...+|+.+++.+. ||||+++++++..
T Consensus 33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~-h~niv~l~~~~~~ 103 (394)
T 4e7w_A 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVK-HPNVVDLKAFFYS 103 (394)
T ss_dssp SSCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCC-CTTBCCEEEEEEE
T ss_pred CCCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCC-CCCcceEEEEEEe
Confidence 3344556779999999999999999999887665 88888754321 1236999999997 9999999999864
Q ss_pred CC------eEEEEEeccCCCChHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCcc
Q 009091 167 RQ------SVHLVMELCSGGELFDKII----AQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 167 ~~------~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~ 236 (544)
.+ .+++||||++++ +...+. ....+++..++.++.||+.||.|||++||+||||||+|||++. .++.
T Consensus 104 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~ 180 (394)
T 4e7w_A 104 NGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP--PSGV 180 (394)
T ss_dssp ESSSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTE
T ss_pred cCCCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC--CCCc
Confidence 33 388999999874 444333 2567999999999999999999999999999999999999952 3457
Q ss_pred EEEeecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc-
Q 009091 237 LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV- 313 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~- 313 (544)
+||+|||+++............||+.|+|||++.+ .++.++|||||||++|||++|..||.+......+..+.+...
T Consensus 181 ~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~ 260 (394)
T 4e7w_A 181 LKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGT 260 (394)
T ss_dssp EEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999988766555567789999999998853 589999999999999999999999998887766655543110
Q ss_pred ----------------cCCC---C-----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 314 ----------------DFES---E-----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 314 ----------------~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
.++. . ....+++++.+||.+||+.||.+|||+.++|+||||++....
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG 331 (394)
T ss_dssp CCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred CCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence 0000 0 012378899999999999999999999999999999876443
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-47 Score=391.78 Aligned_cols=265 Identities=27% Similarity=0.433 Sum_probs=210.5
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--- 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 167 (544)
.+.++|++.+.||+|+||.||+|.+..++..||||++... .......+.+.+|+.+|+++. ||||+++++++...
T Consensus 23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~ 100 (432)
T 3n9x_A 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLL 100 (432)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCCC
Confidence 4567799999999999999999999999999999998643 234455678899999999997 99999999999765
Q ss_pred --CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 168 --QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 168 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
+.+||||||+. ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFGla 176 (432)
T 3n9x_A 101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLA 176 (432)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCCc
Confidence 57999999996 5999999888889999999999999999999999999999999999999 45567999999999
Q ss_pred ccccCCC-----------------------ceecccCCccccCcccc-c-ccCCCcchHHHHHHHHHHHhhCCCCC----
Q 009091 246 VFIDEGK-----------------------VYRDIVGSAYYVAPEVL-R-RSYGKEIDVWSAGVILYILLSGVPPF---- 296 (544)
Q Consensus 246 ~~~~~~~-----------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~~l~el~tg~~pf---- 296 (544)
+...... .....+||+.|+|||++ . ..++.++|||||||++|||++|..||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~ 256 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSG
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccc
Confidence 8765322 12457899999999986 3 45999999999999999999854433
Q ss_pred -------CCCC-----------------hHHHHHHHHh------------------------CCccCCCC---cccCCCH
Q 009091 297 -------WAET-----------------EKGIFDAILK------------------------GGVDFESE---PWLLISD 325 (544)
Q Consensus 297 -------~~~~-----------------~~~~~~~i~~------------------------~~~~~~~~---~~~~~~~ 325 (544)
.+.. ....+..+.. .....+.+ .+..+++
T Consensus 257 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 336 (432)
T 3n9x_A 257 TNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336 (432)
T ss_dssp GGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred ccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence 2221 0111111111 00000000 1135799
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
++.+||.+||..||.+|||++|+|+||||+....+.
T Consensus 337 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~ 372 (432)
T 3n9x_A 337 DGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK 372 (432)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence 999999999999999999999999999999865443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-47 Score=371.09 Aligned_cols=263 Identities=25% Similarity=0.396 Sum_probs=219.6
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|++.+.||+|+||.||+|.+..++..||+|++...........+.+.+|+.+++++. ||||+++++++...+.
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~ 85 (294)
T 4eqm_A 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDDC 85 (294)
T ss_dssp SCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-BTTBCCEEEEEECSSE
T ss_pred hHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC-CCCCceEEEeeeeCCe
Confidence 345678999999999999999999999999999999987655445566678999999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+++||||++|++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCSSSTTC-
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEEeCCCccccc
Confidence 999999999999999999988999999999999999999999999999999999999994 44579999999998765
Q ss_pred CCC--ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC-CCcccCCCH
Q 009091 250 EGK--VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE-SEPWLLISD 325 (544)
Q Consensus 250 ~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 325 (544)
... ......||+.|+|||++. ..++.++||||||+++|+|++|..||.+.................. ......+++
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ 242 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCH
Confidence 432 223457999999999886 4588999999999999999999999998877666555554432211 122345789
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.+.++|.+||+.||.+||+..+.+.++|..-
T Consensus 243 ~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 243 SLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 9999999999999999997777777777543
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=379.25 Aligned_cols=260 Identities=28% Similarity=0.448 Sum_probs=214.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+.+|+.+++++. ||||+++++++...+.+++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEEE
Confidence 456999999999999999999999999999999986543 23444567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
||||+++++|..++...+.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 102 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCTTC-------
T ss_pred EEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCcEEEEeCCCceeecCCc
Confidence 999999998988877778899999999999999999999999999999999999994 4457999999999876442
Q ss_pred CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc----------------
Q 009091 252 KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV---------------- 313 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~---------------- 313 (544)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 23345689999999998864 589999999999999999999999988877665544432100
Q ss_pred ---cCCCC--------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 314 ---DFESE--------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 314 ---~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..+.. ....+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 00000 012468999999999999999999999999999999764
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=384.68 Aligned_cols=257 Identities=33% Similarity=0.566 Sum_probs=215.3
Q ss_pred ccceecceecccCCeEEEEEEEC---CCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
++|++.+.||+|+||.||+|++. .+++.||||++.+.... .....+.+.+|+.+++++.+||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 56999999999999999999984 58999999998654321 122345567899999999779999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++|||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeecc
Confidence 99999999999999999988899999999999999999999999999999999999999 445679999999998654
Q ss_pred CC--CceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHhCCccCCCCcc
Q 009091 250 EG--KVYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAET----EKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 250 ~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~ 320 (544)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ...+...+......+ .
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----~ 286 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----P 286 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC----C
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCC----C
Confidence 32 22334689999999999863 37899999999999999999999997543 233444444443332 2
Q ss_pred cCCCHHHHHHHHHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
..++..+.+||.+||..||.+|| +++++++||||+..
T Consensus 287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 35789999999999999999999 99999999999864
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=373.67 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=214.9
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-- 166 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 166 (544)
.....++|++.+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++++.+||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3445677999999999999999999999999999999985432 3346788999999999669999999999976
Q ss_pred ----CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 167 ----RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 167 ----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~---~~~~~kl~ 171 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLV 171 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEEC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEc---CCCCEEEe
Confidence 56899999999999999999864 5699999999999999999999999999999999999994 44579999
Q ss_pred ecCCcccccCC-CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc
Q 009091 241 DFGLSVFIDEG-KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 241 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~ 313 (544)
|||++...... .......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+.....
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 251 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA 251 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc
Confidence 99999876532 2233457999999999874 4588999999999999999999999988777666655555433
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.. .....+++.+.+||.+||..||.+||++.++++||||+...
T Consensus 252 ~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 252 PR--LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp CC--CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred cc--CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 22 22235789999999999999999999999999999998753
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=367.79 Aligned_cols=274 Identities=25% Similarity=0.426 Sum_probs=229.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..+.|++.+.||+|+||.||+|.+..++..||+|++.... .....+.+.+|+.+++.+. ||||+++++++...+.++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 96 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLW 96 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT--CSTTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc--cHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEE
Confidence 4566999999999999999999999999999999986543 2345678899999999996 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
+||||+++++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 97 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp EEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECBTT
T ss_pred EEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---CCCCEEEeecccceecCcc
Confidence 99999999999998754 5799999999999999999999999999999999999994 4457999999999876543
Q ss_pred C-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 K-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 ~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
. ......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+....... ....++..+.+
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~ 249 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT---LEGNYSKPLKE 249 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---CCSSCCHHHHH
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCC---CccccCHHHHH
Confidence 3 233567999999999986 458899999999999999999999998887776666665543321 22357899999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHHH
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~~ 377 (544)
||.+||+.||.+|||+.++++||||....... .....+..++++++
T Consensus 250 li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~ 295 (303)
T 3a7i_A 250 FVEACLNKEPSFRPTAKELLKHKFILRNAKKT--SYLTELIDRYKRWK 295 (303)
T ss_dssp HHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCG--GGGHHHHHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHhhChhhhcCCCcc--HHHHHHHHHHHHhh
Confidence 99999999999999999999999998764322 22244444444443
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=377.16 Aligned_cols=260 Identities=25% Similarity=0.429 Sum_probs=212.6
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCCe
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ-QNIVEFRGAYEDRQS 169 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~~~ 169 (544)
...++|++.+.||+|+||.||+|.+. ++..||||++.... ......+.+.+|+.+++++.+| |||+++++++...+.
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 34567999999999999999999975 68899999986543 2344567889999999999833 999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+ .+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. +.+||+|||++....
T Consensus 84 ~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~----~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 84 IYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCCC-
T ss_pred EEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC----CcEEEeecccccccC
Confidence 9999995 57899999999989999999999999999999999999999999999999952 469999999998765
Q ss_pred CCC---ceecccCCccccCccccc------------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCc
Q 009091 250 EGK---VYRDIVGSAYYVAPEVLR------------RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGV 313 (544)
Q Consensus 250 ~~~---~~~~~~gt~~y~aPE~~~------------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~ 313 (544)
... .....+||+.|+|||++. ..++.++|||||||++|+|++|..||...... ..+..+.....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc
Confidence 432 223568999999999874 45788999999999999999999999875433 33444444333
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
....+ ...+..+.+||.+||+.||.+|||+.++|+||||+....
T Consensus 239 ~~~~~--~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 282 (343)
T 3dbq_A 239 EIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282 (343)
T ss_dssp CCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC
T ss_pred ccCCc--ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCC
Confidence 32222 245789999999999999999999999999999986543
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=381.69 Aligned_cols=265 Identities=26% Similarity=0.375 Sum_probs=213.7
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh--hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK--QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..++|++.+.||+|+||.||+|.+..+++.||||++........ .....+.+|+.+++.+. ||||+++++++...+.
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC-CCCCCeEEEEEeeCCc
Confidence 34679999999999999999999999999999999865332111 11246789999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++||||+++ +|..++... ..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEEEEecccceec
Confidence 9999999976 888888664 3589999999999999999999999999999999999994 4557999999999876
Q ss_pred cCC-CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc------
Q 009091 249 DEG-KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP------ 319 (544)
Q Consensus 249 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~------ 319 (544)
... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+...........
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence 432 23345689999999998853 478999999999999999999999998888777766654311111110
Q ss_pred ------------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 320 ------------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 320 ------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
+..+++++++||.+||..||.+|||+.|+|+||||+....+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~~ 302 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT 302 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCC
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCCC
Confidence 134578999999999999999999999999999998765443
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=364.74 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=213.2
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++.+.||+|+||+||+|.+..++..||+|++..... .......+.+|+..+..+.+||||+++++++...+.++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 45679999999999999999999999999999999865432 33445678899999999955999999999999999999
Q ss_pred EEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC---------------
Q 009091 172 LVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--------------- 232 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--------------- 232 (544)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 999999999999999764 6799999999999999999999999999999999999996543
Q ss_pred -CCccEEEeecCCcccccCCCceecccCCccccCccccccc--CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHH
Q 009091 233 -GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL 309 (544)
Q Consensus 233 -~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~ 309 (544)
....+||+|||++....... ...||+.|+|||++.+. ++.++|||||||++|+|++|..|+.... ....+.
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~ 241 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIR 241 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHH
T ss_pred CCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHH
Confidence 44579999999998765532 34699999999998654 5579999999999999999998775432 334444
Q ss_pred hCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 310 KGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+.... ....+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 242 ~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 242 QGRLPR---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp TTCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred cCCCCC---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 443321 123579999999999999999999999999999999864
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=386.92 Aligned_cols=270 Identities=26% Similarity=0.425 Sum_probs=206.3
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.+....+.++|++.+.||+|+||.||+|.+..+|..||||++.... ........+.+|+.+++.+. ||||+++++++.
T Consensus 21 ~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~ 98 (367)
T 2fst_X 21 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFT 98 (367)
T ss_dssp TTEEEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEEC
T ss_pred cCcccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEe
Confidence 3445667788999999999999999999999999999999885432 23445677889999999997 999999999986
Q ss_pred eC------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 166 DR------QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 166 ~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
.. ..+++|||++ +++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||
T Consensus 99 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kL 173 (367)
T 2fst_X 99 PARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKI 173 (367)
T ss_dssp SCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEE
T ss_pred cCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC---CCCCEEE
Confidence 54 5689999999 7799888765 6799999999999999999999999999999999999994 4567999
Q ss_pred eecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc---
Q 009091 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD--- 314 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~--- 314 (544)
+|||+++..... ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+......
T Consensus 174 ~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~ 251 (367)
T 2fst_X 174 LDFGLARHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251 (367)
T ss_dssp CC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred eecccccccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 999999875442 345689999999998754 6899999999999999999999999988776666555431110
Q ss_pred --------------------CCCCc----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 315 --------------------FESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 315 --------------------~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
.+... ...+++.+.+||.+||..||.+|||+.++|+||||++...+.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~ 325 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP 325 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGGCC
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCCCC
Confidence 00000 124688999999999999999999999999999999876655443
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=387.39 Aligned_cols=263 Identities=27% Similarity=0.419 Sum_probs=215.8
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc-----CCCCeeEEEE
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS-----GQQNIVEFRG 162 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~ 162 (544)
+...+..+|++.+.||+|+||+||+|.+..++..||||++... ......+.+|+.+++.+. +|+||+++++
T Consensus 91 ~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~ 166 (429)
T 3kvw_A 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166 (429)
T ss_dssp TTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred CCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence 3455677899999999999999999999999999999998532 334567788999998885 4779999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
++...+.+++||||+. ++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++.++ ...+||+
T Consensus 167 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-~~~vkL~ 244 (429)
T 3kvw_A 167 NFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-RSGIKVI 244 (429)
T ss_dssp EEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-SCCEEEC
T ss_pred ecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-CcceEEe
Confidence 9999999999999996 59999988754 499999999999999999999999999999999999995432 1239999
Q ss_pred ecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC---
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE--- 316 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~--- 316 (544)
|||++...... ....+||+.|+|||++. ..++.++|||||||++|||++|..||.+......+..+.......+
T Consensus 245 DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 245 DFGSSCYEHQR--VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322 (429)
T ss_dssp CCTTCEETTCC--CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ecccceecCCc--ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 99999765442 34568999999999876 4699999999999999999999999998887766655543100000
Q ss_pred -----------------------------------------------CCc-----ccCCCHHHHHHHHHhcccCcCCCCC
Q 009091 317 -----------------------------------------------SEP-----WLLISDSAKDLVRKMLIQDPKKRIT 344 (544)
Q Consensus 317 -----------------------------------------------~~~-----~~~~~~~~~~li~~~l~~dp~~Rps 344 (544)
... ....++.+.+||.+||++||.+|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 000 0123778999999999999999999
Q ss_pred hhhhhCCCccccCC
Q 009091 345 SAEVLEHPWMREGG 358 (544)
Q Consensus 345 ~~ell~hp~f~~~~ 358 (544)
++|+|+||||++..
T Consensus 403 a~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 403 PGQALRHPWLRRRL 416 (429)
T ss_dssp HHHHHTSTTTC---
T ss_pred HHHHhCChhhccCC
Confidence 99999999998764
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=364.82 Aligned_cols=259 Identities=31% Similarity=0.524 Sum_probs=219.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|+.+++.+. ||||+++++++...+..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG--CTTHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc--chhhhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCEEEE
Confidence 456999999999999999999999999999999986543 2334577899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||+++++|.+++.....+++..++.++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++.......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECEETT
T ss_pred EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCccccCCCc
Confidence 999999999999988777899999999999999999999999999999999999994 44579999999998654321
Q ss_pred ---ceecccCCccccCcccccc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHhCCccCCCCcccCCCHH
Q 009091 253 ---VYRDIVGSAYYVAPEVLRR-S-YGKEIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 253 ---~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~~l~el~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
......||+.|+|||++.+ . ++.++||||||+++|+|++|..||....... ....+...... ...+..+++.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 237 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDSA 237 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCHH
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCHH
Confidence 2335679999999999864 3 4678999999999999999999998765432 33333332222 2334568999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+.+||.+||+.||.+|||++++++||||+....
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 999999999999999999999999999987643
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=377.49 Aligned_cols=265 Identities=36% Similarity=0.635 Sum_probs=193.1
Q ss_pred cccccceecc-eecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 009091 91 DIRQFYTLGK-ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--- 166 (544)
Q Consensus 91 ~~~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 166 (544)
.+.++|.+.+ .||+|+||+||+|.+..+++.||||++... ....+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 4556798855 699999999999999999999999998532 1233444444444459999999999876
Q ss_pred -CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 167 -RQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 167 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
...++|||||++||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..+..+.+||+|||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 456899999999999999998754 59999999999999999999999999999999999999776666789999999
Q ss_pred CcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHH----HHHHHhCCccCCCC
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGI----FDAILKGGVDFESE 318 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~----~~~i~~~~~~~~~~ 318 (544)
++...... ......||+.|+|||++. ..++.++|||||||++|+|++|..||........ ...+......++.+
T Consensus 177 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 177 FAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp TCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred cceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 99866543 234567899999999885 5588899999999999999999999977654433 23334444455555
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
.+..+++.+.+||.+||+.||.+|||+.++|+||||+........+
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~ 301 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCCCB
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCCCc
Confidence 5567899999999999999999999999999999998765444443
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=384.62 Aligned_cols=256 Identities=27% Similarity=0.419 Sum_probs=210.8
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED---- 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 166 (544)
...++|++++.||+|+||+||+|.+..++..||||++..... ...+|+.+++.+. ||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLD-HVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCC-CTTBCCEEEEEEEC---
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcC-CCCccchhheeeecCcc
Confidence 345679999999999999999999999999999998854321 1237999999997 9999999999843
Q ss_pred ----------------------------------CCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHH
Q 009091 167 ----------------------------------RQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVV 208 (544)
Q Consensus 167 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l 208 (544)
...+++||||+++ +|.+.+.. ...+++..++.++.||+.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3458999999985 77766653 56799999999999999999
Q ss_pred HHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHH
Q 009091 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVIL 286 (544)
Q Consensus 209 ~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l 286 (544)
.|||+.||+||||||+|||++.. ++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++
T Consensus 155 ~~LH~~gi~H~Dikp~Nil~~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 155 GFIHSLGICHRDIKPQNLLVNSK--DNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHHTTTEECSCCCGGGEEEETT--TTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHHCcCccCccCHHHEEEcCC--CCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99999999999999999999532 35799999999998766655566789999999998754 489999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHHHhCCc-----------------cCCC---C-----cccCCCHHHHHHHHHhcccCcCC
Q 009091 287 YILLSGVPPFWAETEKGIFDAILKGGV-----------------DFES---E-----PWLLISDSAKDLVRKMLIQDPKK 341 (544)
Q Consensus 287 ~el~tg~~pf~~~~~~~~~~~i~~~~~-----------------~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~ 341 (544)
|+|++|..||.+....+.+..+..... .++. . ....+++++.+||.+||..||.+
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 999999999998887776666543110 0100 0 01246889999999999999999
Q ss_pred CCChhhhhCCCccccC
Q 009091 342 RITSAEVLEHPWMREG 357 (544)
Q Consensus 342 Rps~~ell~hp~f~~~ 357 (544)
|||+.|+|+||||++.
T Consensus 313 R~t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 313 RINPYEAMAHPFFDHL 328 (383)
T ss_dssp SCCHHHHHTSGGGHHH
T ss_pred CCCHHHHhcCHHHHHH
Confidence 9999999999999864
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=374.58 Aligned_cols=260 Identities=22% Similarity=0.390 Sum_probs=214.6
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-- 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 168 (544)
...++|++.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 82 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCc
Confidence 345779999999999999999999999999999999864332 334577889999999997 999999999998655
Q ss_pred eEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec-CCCCccEEEeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN-KDGGAMLKATDFGL 244 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~-~~~~~~vkl~Dfg~ 244 (544)
.+++||||+++++|.+++..... +++..++.++.||+.||.|||+.||+||||||+|||+.. .+....+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 78999999999999999986433 999999999999999999999999999999999999832 34456799999999
Q ss_pred cccccCCCceecccCCccccCccccc---------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHhC
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR---------RSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKG 311 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~----~~~~~~i~~~ 311 (544)
+.............||+.|+|||++. ..++.++|||||||++|||++|..||..... ...+..+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 99877666556678999999999874 4588999999999999999999999975332 3344444443
Q ss_pred CccC-------------------C--CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 312 GVDF-------------------E--SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 312 ~~~~-------------------~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
.... + ......+++.+.+||.+||+.||.+|||++|+|+||=
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 2210 0 0111123567899999999999999999999999974
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=376.62 Aligned_cols=253 Identities=24% Similarity=0.403 Sum_probs=205.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ---- 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 168 (544)
.++|++.+.||+|+||.||+|++..++..||||++.... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCC-CTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEeccchh
Confidence 456999999999999999999999999999999986543 3445678999999999997 999999999986543
Q ss_pred -----------------------------------------------------eEEEEEeccCCCChHHHHHHcCC---C
Q 009091 169 -----------------------------------------------------SVHLVMELCSGGELFDKIIAQGH---Y 192 (544)
Q Consensus 169 -----------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~---~ 192 (544)
.+++|||||+|++|.+++..... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 38999999999999999987544 4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-------------ceecccC
Q 009091 193 TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-------------VYRDIVG 259 (544)
Q Consensus 193 ~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-------------~~~~~~g 259 (544)
++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... .....+|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 5667899999999999999999999999999999994 44579999999998775432 2234579
Q ss_pred CccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccC
Q 009091 260 SAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338 (544)
Q Consensus 260 t~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 338 (544)
|+.|+|||++. ..++.++|||||||++|+|++|..|+.. .......+.....+ ......++.+.+||.+||+.|
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~ 313 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFP---LLFTQKYPQEHMMVQDMLSPS 313 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHHCSS
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCC---cccccCChhHHHHHHHHccCC
Confidence 99999999886 4689999999999999999998776521 11222223322111 112345788899999999999
Q ss_pred cCCCCChhhhhCCCcccc
Q 009091 339 PKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 339 p~~Rps~~ell~hp~f~~ 356 (544)
|.+|||++++|+||||+.
T Consensus 314 p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 314 PTERPEATDIIENAIFEN 331 (332)
T ss_dssp GGGSCCHHHHHHSTTCCC
T ss_pred CCcCCCHHHHhhchhhhc
Confidence 999999999999999975
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=379.24 Aligned_cols=265 Identities=28% Similarity=0.405 Sum_probs=218.4
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR-- 167 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 167 (544)
..+..+|++.+.||+|+||.||+|.+..++..||||++... ........+.+|+.+++++. ||||+++++++...
T Consensus 23 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 99 (364)
T 3qyz_A 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTI 99 (364)
T ss_dssp CCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSST
T ss_pred ccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCc
Confidence 34557899999999999999999999999999999998542 23445577889999999997 99999999998654
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...++||||+.+ +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 100 ~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 100 EQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGL 174 (364)
T ss_dssp TTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred cccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcc
Confidence 478999999974 89988865 469999999999999999999999999999999999999 4455799999999
Q ss_pred cccccCCCc----eecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC---
Q 009091 245 SVFIDEGKV----YRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF--- 315 (544)
Q Consensus 245 a~~~~~~~~----~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~--- 315 (544)
+........ ....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+.......
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 987653221 23458999999999864 348999999999999999999999998887766665554211000
Q ss_pred --------------------CCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 316 --------------------ESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 316 --------------------~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
... ....+++++.+||.+||+.||.+|||+.++|+||||++...+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~ 325 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCccc
Confidence 000 01346889999999999999999999999999999998755443
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-46 Score=384.46 Aligned_cols=256 Identities=29% Similarity=0.434 Sum_probs=209.8
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR----- 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----- 167 (544)
..+|++.+.||+|+||.||+|.+..++..||||++.... ....+|+++|+++. ||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~~ 124 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKD 124 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCC-CTTBCCEEEEEEEEETTTT
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcC-CCCccceeeEEeccCCCCc
Confidence 446999999999999999999999999999999885432 12347999999997 99999999988532
Q ss_pred -CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 168 -QSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 168 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
..+++||||+++ +|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ ..+||+||
T Consensus 125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~--~~~kl~DF 201 (420)
T 1j1b_A 125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDF 201 (420)
T ss_dssp EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT--TEEEECCC
T ss_pred ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC--CeEEeccc
Confidence 247799999976 66665543 46799999999999999999999999999999999999996432 46899999
Q ss_pred CCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC---------
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--------- 311 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~--------- 311 (544)
|+++...........+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+......+..+.+.
T Consensus 202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99998765555556789999999998853 5899999999999999999999999988776665555431
Q ss_pred --------CccCCC---Cc-----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 312 --------GVDFES---EP-----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 312 --------~~~~~~---~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
.+.++. .+ ...+++++.+||.+||..||.+|||+.|+|+||||++...
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence 011110 01 1246889999999999999999999999999999987543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=381.83 Aligned_cols=259 Identities=26% Similarity=0.412 Sum_probs=205.1
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-- 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 168 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.+. ||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 99 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL 99 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSCCST
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcC-CCCccceEEeecccccc
Confidence 45678999999999999999999999999999999986532 23445677889999999997 999999999997654
Q ss_pred ----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 169 ----SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 169 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
.+++||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 100 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 100 EEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 173 (371)
T ss_dssp TTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCCCC
T ss_pred ccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEEEeec
Confidence 78999999975 7888775 4699999999999999999999999999999999999994 455799999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC------
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES------ 317 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~------ 317 (544)
+............+||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+.........
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 98776554445678999999999886 46899999999999999999999999988877766666543211000
Q ss_pred -----------Ccc---------------------cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 318 -----------EPW---------------------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 318 -----------~~~---------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+.. ...++.+++||.+||..||.+|||++++|+||||+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 000 0115678999999999999999999999999999854
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=378.54 Aligned_cols=259 Identities=25% Similarity=0.381 Sum_probs=217.3
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
...++|++.+.||+|+||.||+|.+..++..||+|++.... .....+.+.+|+.+++++. ||||+++++++...+.+
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEETTEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCC-CCCEEEEeEEEEECCEE
Confidence 34567999999999999999999999999999999986542 3445678899999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||++|++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+|||++ .++.+||+|||++....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHHH
T ss_pred EEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCCcccc
Confidence 99999999999999999888999999999999999999999996 999999999999994 44579999999997653
Q ss_pred CCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHH----------------------
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD---------------------- 306 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~---------------------- 306 (544)
.. ......||+.|+|||++. ..++.++|||||||++|+|++|..||..........
T Consensus 184 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 184 DS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp HH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred cc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 32 223468999999999886 458999999999999999999999998765543321
Q ss_pred --------------------HHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 307 --------------------AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 307 --------------------~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.+..... +..+...++.++.+||.+||+.||.+|||++++|+||||+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred cccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 1111111 1112234688999999999999999999999999999998753
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=387.55 Aligned_cols=265 Identities=26% Similarity=0.440 Sum_probs=197.7
Q ss_pred cccccccee-cceecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTL-GKELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~-~~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..+.+.|.+ +++||+|+||+||+|.++ .++..||||++.... ....+.+|+.+|+++. ||||+++++++..
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~ 89 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLS 89 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-----CCHHHHHHHHHHHHCC-CTTBCCCCEEEEE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-----CCHHHHHHHHHHHhcC-CCCeeeEeeEEec
Confidence 345566877 668999999999999966 568899999885332 2346789999999997 9999999999954
Q ss_pred --CCeEEEEEeccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC-CCC
Q 009091 167 --RQSVHLVMELCSGGELFDKIIAQ---------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK-DGG 234 (544)
Q Consensus 167 --~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~-~~~ 234 (544)
...++|||||+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..
T Consensus 90 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 90 HADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTT
T ss_pred CCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCC
Confidence 6789999999965 888877532 248999999999999999999999999999999999999643 345
Q ss_pred ccEEEeecCCcccccCC----CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChH------
Q 009091 235 AMLKATDFGLSVFIDEG----KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEK------ 302 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~------ 302 (544)
+.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 248 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccccc
Confidence 68999999999876532 22345689999999998864 4899999999999999999999999765432
Q ss_pred ---HHHHHHHhCCccCCCCccc----------------------------------CCCHHHHHHHHHhcccCcCCCCCh
Q 009091 303 ---GIFDAILKGGVDFESEPWL----------------------------------LISDSAKDLVRKMLIQDPKKRITS 345 (544)
Q Consensus 303 ---~~~~~i~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~l~~dp~~Rps~ 345 (544)
..+..+...........|. ..++.+.+||.+||..||.+|||+
T Consensus 249 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta 328 (405)
T 3rgf_A 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS 328 (405)
T ss_dssp CCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCH
T ss_pred chHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 3333333211111111111 126789999999999999999999
Q ss_pred hhhhCCCccccCCCCC
Q 009091 346 AEVLEHPWMREGGEAS 361 (544)
Q Consensus 346 ~ell~hp~f~~~~~~~ 361 (544)
+|+|+||||++...+.
T Consensus 329 ~e~L~hp~f~~~~~~~ 344 (405)
T 3rgf_A 329 EQAMQDPYFLEDPLPT 344 (405)
T ss_dssp HHHHTSGGGTSSSCCC
T ss_pred HHHhcChhhccCCCCc
Confidence 9999999999865543
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-48 Score=392.24 Aligned_cols=251 Identities=17% Similarity=0.188 Sum_probs=203.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEE-------E
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFR-------G 162 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~-------~ 162 (544)
..++|++.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.+++.+. +||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 3567999999999999999999999999999999997654445556788999996555543 499999988 7
Q ss_pred EEEeCCe-----------------EEEEEeccCCCChHHHHHHcCCCCH-------HHHHHHHHHHHHHHHHHHHcCCEe
Q 009091 163 AYEDRQS-----------------VHLVMELCSGGELFDKIIAQGHYTE-------KAAAALCRAIVNVVHHCHFMGVMH 218 (544)
Q Consensus 163 ~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~~~~~-------~~~~~~~~ql~~~l~~lH~~~ivH 218 (544)
++...+. .||||||+ +|+|.+++...+.+++ ..++.++.||+.||+|||++||+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 229 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 229 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 7665542 88999999 6799999987655555 788889999999999999999999
Q ss_pred ecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccccCcccccc------------cCCCcchHHHHHHHH
Q 009091 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR------------SYGKEIDVWSAGVIL 286 (544)
Q Consensus 219 rDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~~l 286 (544)
|||||+|||++ .++.+||+|||+++.... .....+| +.|+|||++.+ .++.++|||||||++
T Consensus 230 rDikp~NIll~---~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 230 TYLRPVDIVLD---QRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp SCCCGGGEEEC---TTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred CCCCHHHEEEc---CCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 99999999995 445799999999986443 3445678 99999999863 589999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 287 YILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 287 ~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|||++|..||.+.........+.. .+..+++++.+||.+||+.||.+|||+.++|+||||++.
T Consensus 304 ~elltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHHHHSSCCC------CCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHHHHCCCCCcccccccchhhhhh--------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 999999999976544332222221 123579999999999999999999999999999999753
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=364.05 Aligned_cols=259 Identities=24% Similarity=0.295 Sum_probs=198.0
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||+||+|.+..+++.||+|++..... .......+..+...++.+. ||||+++++++...+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~iv~~~~~~~~~~~~~ 82 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDVW 82 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSSEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCC-CCeEEEEeeeeeccCCEE
Confidence 45679999999999999999999999999999999854321 1222233344444466665 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 172 LVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
+||||++| +|.+++.. ...+++..++.++.|++.||.|||++ ||+||||||+|||++ ..+.+||+|||++.
T Consensus 83 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 83 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALGQVKMCDFGISG 158 (290)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TTCCEEBCCC----
T ss_pred EEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecCCcc
Confidence 99999975 88777654 46799999999999999999999998 999999999999994 44579999999998
Q ss_pred cccCCCceecccCCccccCccccc-----ccCCCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhCCccCCCCcc
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLR-----RSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~ 320 (544)
............||+.|+|||++. ..++.++|||||||++|+|++|..||... ............... ..+.
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 236 (290)
T 3fme_A 159 YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--QLPA 236 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC--CCCT
T ss_pred cccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC--Cccc
Confidence 776655445568999999999862 45788999999999999999999999763 333344444443222 1222
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 35799999999999999999999999999999998653
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-46 Score=366.54 Aligned_cols=261 Identities=26% Similarity=0.486 Sum_probs=218.0
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-hhcHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-KQDREDIKREIQIMQHLSGQQNIVEFRGAYE--DRQ 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--~~~ 168 (544)
+.++|++++.||+|+||.||+|.+..++..||+|++....... ......+.+|+.+++++. ||||+++++++. ..+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCC
Confidence 3467999999999999999999999999999999986543221 234577899999999997 999999999984 456
Q ss_pred eEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 169 SVHLVMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
..++||||++++ |.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeecccccc
Confidence 899999999875 7777765 45699999999999999999999999999999999999994 44579999999998
Q ss_pred cccC---CCceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 247 FIDE---GKVYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 247 ~~~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
.... ........||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~--- 234 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG--- 234 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCS---
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCC---
Confidence 7643 222345679999999998864 2477999999999999999999999988888888887776554432
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 361 (544)
.+++.+.+||.+||+.||.+|||++++++||||++...+.
T Consensus 235 -~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~ 274 (305)
T 2wtk_C 235 -DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA 274 (305)
T ss_dssp -SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-
T ss_pred -ccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCc
Confidence 5789999999999999999999999999999998765443
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-46 Score=365.65 Aligned_cols=261 Identities=26% Similarity=0.437 Sum_probs=217.5
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.+..++|++.+.||+|+||.||+|.+..++..||+|++... .....+.+.+|+.+++.+. ||||+++++++...+.
T Consensus 15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 90 (302)
T 2j7t_A 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGK 90 (302)
T ss_dssp SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-C
T ss_pred cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCe
Confidence 34567799999999999999999999999999999988543 2345678899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
+++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++...
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCCccc
Confidence 9999999999999998876 46699999999999999999999999999999999999994 4457999999987643
Q ss_pred cCC-CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 249 DEG-KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 249 ~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
... .......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+........ ....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 246 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LTPS 246 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGG
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CCcc
Confidence 211 1223457999999999873 4578999999999999999999999998887777666665543222 2234
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.++..+.++|.+||+.||.+|||+.++++||||+...
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 5789999999999999999999999999999998754
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-46 Score=377.58 Aligned_cols=262 Identities=26% Similarity=0.373 Sum_probs=215.6
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC-----eeEEEE
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN-----IVEFRG 162 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~-----iv~~~~ 162 (544)
..+.+.++|++.+.||+|+||+||+|.+..+++.||||++... ......+.+|+.+++.+.+|++ |+++++
T Consensus 48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence 3455677899999999999999999999999999999998532 3345677889999998875664 999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH--HcCCEeecCCCCceeeecCCCCccEE
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCH--FMGVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH--~~~ivHrDikp~Nill~~~~~~~~vk 238 (544)
++...+.++|||||+.+ +|.+++... +.+++..++.++.|++.||.||| +.||+||||||+|||++.+ ..+.+|
T Consensus 124 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~-~~~~~k 201 (382)
T 2vx3_A 124 HFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP-KRSAIK 201 (382)
T ss_dssp EEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST-TSCCEE
T ss_pred eeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC-CCCcEE
Confidence 99999999999999965 999999875 45999999999999999999999 5799999999999999642 345799
Q ss_pred EeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC-
Q 009091 239 ATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE- 316 (544)
Q Consensus 239 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~- 316 (544)
|+|||++...... ....+||+.|+|||++. ..++.++|||||||++|||++|..||.+......+..+.......+
T Consensus 202 L~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 279 (382)
T 2vx3_A 202 IVDFGSSCQLGQR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPA 279 (382)
T ss_dssp ECCCTTCEETTCC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred EEeccCceecccc--cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9999999876543 34568999999999886 4689999999999999999999999998887776666554211000
Q ss_pred -----------------CCcc-----------------cC-------------------------CCHHHHHHHHHhccc
Q 009091 317 -----------------SEPW-----------------LL-------------------------ISDSAKDLVRKMLIQ 337 (544)
Q Consensus 317 -----------------~~~~-----------------~~-------------------------~~~~~~~li~~~l~~ 337 (544)
...| .. .++++++||.+||+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 359 (382)
T 2vx3_A 280 HILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDY 359 (382)
T ss_dssp HHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred HHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCC
Confidence 0000 00 013789999999999
Q ss_pred CcCCCCChhhhhCCCccccC
Q 009091 338 DPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 338 dp~~Rps~~ell~hp~f~~~ 357 (544)
||.+|||++|+|+||||++.
T Consensus 360 dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 360 DPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp CTTTSCCHHHHTTSGGGCC-
T ss_pred ChhhCCCHHHHhcCcccccC
Confidence 99999999999999999875
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-46 Score=366.20 Aligned_cols=261 Identities=24% Similarity=0.369 Sum_probs=210.3
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
..+....+|++.+.||+|+||+||+|.+ ++..||||++..... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQP 106 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECST
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEC
Confidence 3344466799999999999999999986 488999999865432 3445677899999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCCccEEEeec
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
+.+++||||+++++|.+++...+. +++..++.++.||+.||.|||+.| |+||||||+|||+ +.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEECCC
Confidence 999999999999999999987554 999999999999999999999999 9999999999999 44567999999
Q ss_pred CCcccccCCC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 243 GLSVFIDEGK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 243 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
|++....... ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+.........+
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-- 261 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP-- 261 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCC--
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--
Confidence 9997654332 233568999999999986 458999999999999999999999999888877776665443333322
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhC--CCccccC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLE--HPWMREG 357 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~--hp~f~~~ 357 (544)
..+++.+.+||.+||+.||.+|||++++++ +++++..
T Consensus 262 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 357999999999999999999999999987 6666554
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=374.88 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=212.9
Q ss_pred ccccceecceecccCCeEEEEEEEC-------CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTEN-------STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
..++|++++.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++++.+||||+++++++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 3567999999999999999999874 345579999885432 3445678899999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceee
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLL 228 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill 228 (544)
...+.+|+||||+++|+|.+++...+ .++...++.++.||+.||.|||++||+||||||+|||+
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence 99999999999999999999998753 47899999999999999999999999999999999999
Q ss_pred ecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHH
Q 009091 229 SNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303 (544)
Q Consensus 229 ~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~ 303 (544)
+.++.+||+|||++........ .....||+.|+|||++. ..++.++|||||||++|||++ |..||.+.....
T Consensus 237 ---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~ 313 (370)
T 2psq_A 237 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313 (370)
T ss_dssp ---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred ---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 4456799999999987654322 22346788999999875 568999999999999999999 999999888877
Q ss_pred HHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
....+..+... . ....+++++.++|.+||+.||.+|||+.+++++
T Consensus 314 ~~~~~~~~~~~-~--~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 314 LFKLLKEGHRM-D--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHHHTTCCC-C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCC-C--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77776655322 1 223578999999999999999999999998864
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-47 Score=383.57 Aligned_cols=258 Identities=16% Similarity=0.181 Sum_probs=196.0
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc-CCCCeeEEE-------EEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS-GQQNIVEFR-------GAYE 165 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~-------~~~~ 165 (544)
..|++.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.+++.|. +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 44999999999999999999999999999999997755434455677888866666554 499988865 4444
Q ss_pred eC-----------------CeEEEEEeccCCCChHHHHHHc-CCCCHHHH------HHHHHHHHHHHHHHHHcCCEeecC
Q 009091 166 DR-----------------QSVHLVMELCSGGELFDKIIAQ-GHYTEKAA------AALCRAIVNVVHHCHFMGVMHRDL 221 (544)
Q Consensus 166 ~~-----------------~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~------~~~~~ql~~~l~~lH~~~ivHrDi 221 (544)
.. ..+||||||++ ++|.+++... ..++.... ..++.||+.||.|||++||+||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 33 34899999998 7999999864 33444445 677799999999999999999999
Q ss_pred CCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCC
Q 009091 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWA 298 (544)
Q Consensus 222 kp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~ 298 (544)
||+|||++ .++.+||+|||++...... .....||+.|+|||++. ..++.++|||||||++|+|++|+.||..
T Consensus 221 kp~NIll~---~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 221 TPDNLFIM---PDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp SGGGEEEC---TTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CHHHEEEC---CCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 99999994 4557999999999876432 22456779999999986 3589999999999999999999999987
Q ss_pred CChHHH--HHH---HHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 299 ETEKGI--FDA---ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 299 ~~~~~~--~~~---i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
...... ... .......+..+.+..+++.+.+||.+||+.||.+|||+.++|+||||++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp CCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred cCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 643210 000 01111222233334689999999999999999999999999999999764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=378.94 Aligned_cols=260 Identities=23% Similarity=0.468 Sum_probs=220.9
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhc--------------HHHHHHHHHHHHhccCCCC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD--------------REDIKREIQIMQHLSGQQN 156 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~--------------~~~~~~E~~~l~~l~~h~~ 156 (544)
...++|++.+.||+|+||.||+|.+ ++..||+|++.......... .+.+.+|+.+++++. |||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ 104 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEY 104 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTT
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCC
Confidence 3456799999999999999999998 79999999997554322211 278899999999997 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCChHHH------HHH--cCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCcee
Q 009091 157 IVEFRGAYEDRQSVHLVMELCSGGELFDK------IIA--QGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFL 227 (544)
Q Consensus 157 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~--~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nil 227 (544)
|+++++++...+.+++||||+++++|.++ +.. ...+++..++.++.||+.||.|||+ .||+||||||+|||
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 99999999999999999999999999998 655 5679999999999999999999999 99999999999999
Q ss_pred eecCCCCccEEEeecCCcccccCCCceecccCCccccCccccccc--CCC-cchHHHHHHHHHHHhhCCCCCCCCCh-HH
Q 009091 228 LSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS--YGK-EIDVWSAGVILYILLSGVPPFWAETE-KG 303 (544)
Q Consensus 228 l~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DiwslG~~l~el~tg~~pf~~~~~-~~ 303 (544)
++ .++.+||+|||++...... ......||+.|+|||++.+. ++. ++|||||||++|+|++|..||..... ..
T Consensus 185 ~~---~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 185 MD---KNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp EC---TTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred Ec---CCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 94 4457999999999876544 33456899999999998643 455 89999999999999999999988766 66
Q ss_pred HHHHHHhCCccCCCCc---------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 304 IFDAILKGGVDFESEP---------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 304 ~~~~i~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
....+..+...++... ...+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 7777766655444211 13578999999999999999999999999999999865
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=367.72 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=211.9
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCe---EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNS---YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~---~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
....+|++.+.||+|+||.||+|.+..++.. ||||++.... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 122 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRG 122 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECGG
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeC
Confidence 3456799999999999999999999866554 9999985432 3445678899999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
+.+++||||++|++|.+++... +.+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSR 199 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCE
T ss_pred CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCccc
Confidence 9999999999999999999764 579999999999999999999999999999999999999 445689999999998
Q ss_pred cccCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 247 FIDEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 247 ~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
....... .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+.. . +..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~ 276 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR-L--PAP 276 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC-C--CCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCC-C--CCC
Confidence 7654321 12235678899999986 568999999999999999999 9999999888888877766532 2 222
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
..+++.+.+||.+||..||.+|||+.++++
T Consensus 277 ~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 367999999999999999999999999875
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=369.84 Aligned_cols=266 Identities=29% Similarity=0.435 Sum_probs=216.7
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR- 167 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 167 (544)
...+.++|++.+.||+|+||.||+|.+..+++.||||++... ........+.+|+.+++++. ||||+++++++...
T Consensus 6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 82 (353)
T 2b9h_A 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFK-HENIITIFNIQRPDS 82 (353)
T ss_dssp CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSC
T ss_pred ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCc-CCCcCCeeeeecccc
Confidence 344667899999999999999999999999999999998532 23445567889999999997 99999999988654
Q ss_pred ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 168 ----QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 168 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
...++||||+. ++|.+++.. +.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 83 ~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg 157 (353)
T 2b9h_A 83 FENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFG 157 (353)
T ss_dssp STTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCT
T ss_pred cCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---CCCcEEEEecc
Confidence 67999999997 589888876 5799999999999999999999999999999999999994 45579999999
Q ss_pred CcccccCCCc-----------eecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHh
Q 009091 244 LSVFIDEGKV-----------YRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK 310 (544)
Q Consensus 244 ~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~ 310 (544)
++........ ....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 9987643211 12357899999999874 4589999999999999999999999988776655444332
Q ss_pred CCc------------------------cCCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 311 GGV------------------------DFESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 311 ~~~------------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
... ..+.. .+..+++++.+||.+||+.||.+|||++++|+||||+....+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~ 317 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPND 317 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCccc
Confidence 100 00000 01357899999999999999999999999999999988655443
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=366.03 Aligned_cols=263 Identities=25% Similarity=0.356 Sum_probs=216.3
Q ss_pred ccccceecceecccCCeEEEEEEEC-CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEE---
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTEN-STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYE--- 165 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~--- 165 (544)
..++|++.+.||+|+||.||+|.+. .+++.||+|++...... ......+.+|+.+++.+. +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567999999999999999999995 67889999998654322 222335667888888774 4999999999987
Q ss_pred --eCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 166 --DRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 166 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
....+++||||+. ++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~---~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc---CCCCEEEec
Confidence 5567999999997 59999998753 499999999999999999999999999999999999994 445799999
Q ss_pred cCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC-----
Q 009091 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF----- 315 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~----- 315 (544)
||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+.......
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence 99998765544445568999999999885 568999999999999999999999999888777666665321000
Q ss_pred C------------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 316 E------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 316 ~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
+ ......+++.+++||.+||+.||.+|||+.++|+||||+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 0 0011357889999999999999999999999999999987644
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=361.95 Aligned_cols=257 Identities=27% Similarity=0.484 Sum_probs=214.2
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||.||+|.+..++..||+|++... ...+.+.+|+.+++++. ||||+++++++...+.++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT-----SCCHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch-----HHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEE
Confidence 456699999999999999999999999999999988542 23467889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.....
T Consensus 101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECBT
T ss_pred EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccchhhhh
Confidence 99999999999999874 56799999999999999999999999999999999999994 445799999999987654
Q ss_pred CC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+...... .......+++.+.
T Consensus 178 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 256 (314)
T 3com_A 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-TFRKPELWSDNFT 256 (314)
T ss_dssp TBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSSGGGSCHHHH
T ss_pred hccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCc-ccCCcccCCHHHH
Confidence 32 233467999999999886 45899999999999999999999999887766555444443221 1222335789999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+||.+||..||.+|||+.++|+||||+...
T Consensus 257 ~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 257 DFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred HHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 999999999999999999999999998753
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-46 Score=375.72 Aligned_cols=263 Identities=26% Similarity=0.408 Sum_probs=214.2
Q ss_pred CCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
.....+.++|.+.+.||+|+||.||+|.+..++..||||++.... ........+.+|+.+++.+. ||||+++++++..
T Consensus 35 ~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 112 (371)
T 4exu_A 35 KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTP 112 (371)
T ss_dssp TEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECS
T ss_pred cceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcC-CCCchhhhhheec
Confidence 334556788999999999999999999999999999999986532 23445678889999999997 9999999999987
Q ss_pred CCeE------EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 167 RQSV------HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 167 ~~~~------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.+.. ++||||+. ++|.+.+ ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus 113 ~~~~~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kL~ 186 (371)
T 4exu_A 113 ASSLRNFYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKIL 186 (371)
T ss_dssp CSSSTTCCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEEC
T ss_pred cCCcccceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC---CCCCEEEE
Confidence 6654 99999997 5887776 34599999999999999999999999999999999999994 45579999
Q ss_pred ecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc----
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD---- 314 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~---- 314 (544)
|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+......
T Consensus 187 Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 187 DFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264 (371)
T ss_dssp STTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ecCcccccccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHH
Confidence 99999866442 345689999999998864 6899999999999999999999999988776666555431100
Q ss_pred -------------------CCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 315 -------------------FESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 315 -------------------~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
.... .+..+++.+.+||.+||+.||.+|||++++|+||||+....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 332 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD 332 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCC
Confidence 0000 01246899999999999999999999999999999986543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=369.07 Aligned_cols=262 Identities=28% Similarity=0.401 Sum_probs=215.1
Q ss_pred CcccccccceecceecccCCeEEEEEEE-CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCC------CeeEE
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTE-NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ------NIVEF 160 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~------~iv~~ 160 (544)
..+.+.++|++.+.||+|+||.||+|.+ ..+++.||+|++... ....+.+.+|+.+++.+. |+ +|+++
T Consensus 8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~~ 82 (339)
T 1z57_A 8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLN-TTDPNSTFRCVQM 82 (339)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHH-HHCTTCTTCBCCE
T ss_pred cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhh-hcCCCCceeeEee
Confidence 3455677899999999999999999998 567889999988532 344567889999999987 44 59999
Q ss_pred EEEEEeCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-----
Q 009091 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG----- 233 (544)
Q Consensus 161 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~----- 233 (544)
++++...+.+++||||+ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence 99999999999999999 889999998765 5899999999999999999999999999999999999965321
Q ss_pred -----------CccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh
Q 009091 234 -----------GAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE 301 (544)
Q Consensus 234 -----------~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~ 301 (544)
++.+||+|||++...... .....||+.|+|||++. ..++.++|||||||++|||++|..||.....
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred CccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 457999999999865442 24568999999999886 4689999999999999999999999988776
Q ss_pred HHHHHHHHhCCccCCC----------------------------------------CcccCCCHHHHHHHHHhcccCcCC
Q 009091 302 KGIFDAILKGGVDFES----------------------------------------EPWLLISDSAKDLVRKMLIQDPKK 341 (544)
Q Consensus 302 ~~~~~~i~~~~~~~~~----------------------------------------~~~~~~~~~~~~li~~~l~~dp~~ 341 (544)
......+.......+. ......++.+.+||.+||+.||.+
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 6554443221111100 000112467899999999999999
Q ss_pred CCChhhhhCCCccccC
Q 009091 342 RITSAEVLEHPWMREG 357 (544)
Q Consensus 342 Rps~~ell~hp~f~~~ 357 (544)
|||+.|+|+||||++.
T Consensus 320 Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 320 RITLREALKHPFFDLL 335 (339)
T ss_dssp SCCHHHHTTSGGGGGG
T ss_pred ccCHHHHhcCHHHHHH
Confidence 9999999999999865
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=376.91 Aligned_cols=259 Identities=22% Similarity=0.284 Sum_probs=219.5
Q ss_pred cccccceecceecccCCeEEEEEE-----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
...++|++++.||+|+||+||+|. +..++..||||++... ........+.+|+.+++++. ||||+++++++.
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~ 144 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVSL 144 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCC-CCCCCeEEEEEe
Confidence 345779999999999999999999 4456778999988532 23445567889999999997 999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEE
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQG-------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vk 238 (544)
..+..++||||++||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++....+|
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999999998753 489999999999999999999999999999999999997655566799
Q ss_pred EeecCCcccccC---CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCc
Q 009091 239 ATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 239 l~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~ 313 (544)
|+|||+++.... ........||+.|+|||++. ..++.++|||||||++|||++ |..||...........+..+..
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~ 304 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 304 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999999976432 12233457899999999885 568999999999999999998 9999999888888887776643
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
... ...+++.+.+||.+||+.||.+|||+.+++++.|+.
T Consensus 305 ~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 305 MDP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 222 235789999999999999999999999999998864
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=359.54 Aligned_cols=258 Identities=27% Similarity=0.474 Sum_probs=218.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCCeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE--DRQSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--~~~~~ 170 (544)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++. ..+.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceE
Confidence 3569999999999999999999999999999999865432 3445678899999999997 999999999875 46789
Q ss_pred EEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC-----CEeecCCCCceeeecCCCCccEEEee
Q 009091 171 HLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVHHCHFMG-----VMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~-----ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
++||||+++++|.+++... ..+++..++.++.|++.||.|||+.| |+||||||+|||++ .++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~---~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC---SSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc---CCCCEEEec
Confidence 9999999999999999763 34999999999999999999999999 99999999999994 455799999
Q ss_pred cCCcccccCCC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 242 FGLSVFIDEGK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 242 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
||++....... ......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+..+.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--- 236 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--- 236 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccC---
Confidence 99998765432 223457999999999886 4588999999999999999999999998887777777776654322
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
...+++++.++|.+||+.||.+|||+.++|+|+|+.+..
T Consensus 237 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 237 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 125789999999999999999999999999999998764
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-46 Score=376.03 Aligned_cols=262 Identities=25% Similarity=0.361 Sum_probs=203.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe---
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS--- 169 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--- 169 (544)
.++|++.+.||+|+||+||+|.+..++..||||++.... .......+|+..+..+. ||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----RFRNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCT----TCCCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSCT
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc----cccHHHHHHHHHHHhcC-CCCcccHHHhhhccccccc
Confidence 456999999999999999999999999999999885432 22335567888888887 9999999999865332
Q ss_pred ----EEEEEeccCCCChHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH--HcCCEeecCCCCceeeecCCCCccEEE
Q 009091 170 ----VHLVMELCSGGELFDKII----AQGHYTEKAAAALCRAIVNVVHHCH--FMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 170 ----~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~ql~~~l~~lH--~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
+++||||+++ +|...+. ....+++..++.++.|++.||.||| ++||+||||||+|||++.. ++.+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~--~~~~kl 173 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKL 173 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT--TTEEEE
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC--CCcEEE
Confidence 8899999986 5554443 4567899999999999999999999 9999999999999999642 357999
Q ss_pred eecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC-
Q 009091 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE- 316 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~- 316 (544)
+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+........
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 253 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253 (360)
T ss_dssp CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence 99999998776655566789999999998743 489999999999999999999999998887776666544211000
Q ss_pred -------------------C--------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 317 -------------------S--------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 317 -------------------~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
. .....+++++.+||.+||+.||.+|||+.|+|+||||++...+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~ 326 (360)
T 3e3p_A 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPAT 326 (360)
T ss_dssp HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTC
T ss_pred HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCccc
Confidence 0 001124678999999999999999999999999999998755443
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=366.20 Aligned_cols=260 Identities=28% Similarity=0.452 Sum_probs=196.9
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||.||+|.+..++..||||++..... ....+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCC-CTTBCCEEEEEESSSCEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCCcE
Confidence 34569999999999999999999998999999998854321 234567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 172 LVMELCSGGELFDKIIA--------QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCCCEEEEecc
Confidence 99999999999999874 35589999999999999999999999999999999999994 44579999999
Q ss_pred CcccccCCC------ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccC
Q 009091 244 LSVFIDEGK------VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315 (544)
Q Consensus 244 ~a~~~~~~~------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~ 315 (544)
++....... ......||+.|+|||++. ..++.++|||||||++|+|++|..||...................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence 987654321 123457999999999985 458999999999999999999999998877666555554433221
Q ss_pred CC------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 316 ES------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 316 ~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.. .....+++.+.++|.+||+.||.+|||+.++++||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 11 1123578899999999999999999999999999999865
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=367.20 Aligned_cols=266 Identities=29% Similarity=0.406 Sum_probs=211.9
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE----
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE---- 165 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 165 (544)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 82 (320)
T 2i6l_A 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSGS 82 (320)
T ss_dssp EEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECTTSC
T ss_pred CccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcC-CCCeeEEEEecccccc
Confidence 45667899999999999999999999999999999988543 3455678899999999997 999999999873
Q ss_pred ----------eCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 166 ----------DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 166 ----------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
..+..++||||++ |+|.+++. .+.+++..++.++.|++.||.|||++||+||||||+|||++.. +.
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~ 158 (320)
T 2i6l_A 83 QLTDDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE--DL 158 (320)
T ss_dssp BCCC----CCSCSEEEEEEECCS-EEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--TT
T ss_pred ccccccccccccCceeEEeeccC-CCHHHHhh-cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CC
Confidence 3468899999997 59998875 4679999999999999999999999999999999999999633 35
Q ss_pred cEEEeecCCcccccCC----CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHH
Q 009091 236 MLKATDFGLSVFIDEG----KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL 309 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~ 309 (544)
.+||+|||++...... .......||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.........+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 7999999999876432 1223456899999999874 468999999999999999999999999887766665554
Q ss_pred hCCccC----------------------CCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCC
Q 009091 310 KGGVDF----------------------ESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363 (544)
Q Consensus 310 ~~~~~~----------------------~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 363 (544)
...... +.. ....+++++++||.+||+.||.+|||++++|+||||+....+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~~ 318 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDE 318 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC----
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccCC
Confidence 432110 000 112478999999999999999999999999999999987655443
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-46 Score=374.66 Aligned_cols=265 Identities=24% Similarity=0.353 Sum_probs=207.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc--------ChhcHHHHHHHHHHHHhccCCCCeeEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV--------NKQDREDIKREIQIMQHLSGQQNIVEFR 161 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--------~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 161 (544)
..+.++|++++.||+|+||.||+|.+.. +..||||++...... .....+.+.+|+.+++++. ||||++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~ 95 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLR 95 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCS
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCcccee
Confidence 4456789999999999999999999865 899999998654322 1223477899999999997 99999999
Q ss_pred EEEEe-----CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 162 GAYED-----RQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 162 ~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
+++.. ...+++||||+. |+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 96 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---~~~ 171 (362)
T 3pg1_A 96 DIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNN 171 (362)
T ss_dssp EEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTC
T ss_pred eeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc---CCC
Confidence 99843 347899999997 5888887754 3699999999999999999999999999999999999994 445
Q ss_pred cEEEeecCCcccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc
Q 009091 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~ 313 (544)
.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+.....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 251 (362)
T 3pg1_A 172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251 (362)
T ss_dssp CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 79999999998766555555678999999999875 4589999999999999999999999998877666655543110
Q ss_pred ------------------------cCCCCc----ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 314 ------------------------DFESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 314 ------------------------~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
..+... ...+++.+.+||.+||+.||.+|||+.++|+||||+....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 326 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDP 326 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCc
Confidence 000000 12458889999999999999999999999999999876443
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=376.81 Aligned_cols=261 Identities=22% Similarity=0.344 Sum_probs=208.0
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC-------CCCeeEEE
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG-------QQNIVEFR 161 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-------h~~iv~~~ 161 (544)
...+.++|++.+.||+|+||+||+|++..+++.||||++... ....+.+.+|+.+++.+.+ |+||++++
T Consensus 32 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 32 GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 (397)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred hhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence 345667899999999999999999999999999999998532 3445678899999999962 78899999
Q ss_pred EEEE----eCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCC--
Q 009091 162 GAYE----DRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKD-- 232 (544)
Q Consensus 162 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~-- 232 (544)
+++. ....++|||||+ +++|.+.+... ..+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHH
T ss_pred cceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchh
Confidence 9987 456899999999 56777777654 4699999999999999999999998 999999999999996432
Q ss_pred --------------------------------------------CCccEEEeecCCcccccCCCceecccCCccccCccc
Q 009091 233 --------------------------------------------GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268 (544)
Q Consensus 233 --------------------------------------------~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~ 268 (544)
....+||+|||++...... ....+||+.|+|||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChh
Confidence 1137999999999876543 345689999999998
Q ss_pred cc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh------HHHHHHHHhCCccCCC------------------------
Q 009091 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE------KGIFDAILKGGVDFES------------------------ 317 (544)
Q Consensus 269 ~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~------~~~~~~i~~~~~~~~~------------------------ 317 (544)
+. ..++.++|||||||++|+|++|..||..... ...+..+.......+.
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 86 4589999999999999999999999976542 2222222110000000
Q ss_pred --------------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 318 --------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 318 --------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
......++.+.+||.+||+.||.+|||++|+|+||||+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 000123467889999999999999999999999999963
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=366.49 Aligned_cols=264 Identities=26% Similarity=0.374 Sum_probs=214.2
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCC-CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC------ee
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN------IV 158 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------iv 158 (544)
......+.++|++.+.||+|+||+||+|.+..++ ..||+|++... ....+.+.+|+.+++.+. |++ ++
T Consensus 11 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~ 85 (355)
T 2eu9_A 11 CRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIK-EKDKENKFLCV 85 (355)
T ss_dssp CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHH-HHCTTSCSCBC
T ss_pred cccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHh-hcCCCCceeEE
Confidence 3444566788999999999999999999998777 68999998532 344567889999999987 444 89
Q ss_pred EEEEEEEeCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC-----
Q 009091 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK----- 231 (544)
Q Consensus 159 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~----- 231 (544)
.+++++...+.++|||||+ +++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||+...
T Consensus 86 ~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 86 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEE
T ss_pred EeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccc
Confidence 9999999999999999999 667878777653 69999999999999999999999999999999999999543
Q ss_pred -----------CCCccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCC
Q 009091 232 -----------DGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAE 299 (544)
Q Consensus 232 -----------~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~ 299 (544)
+..+.+||+|||++...... .....||+.|+|||++. ..++.++|||||||++|+|++|..||...
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 23467999999999865442 24568999999999885 56899999999999999999999999887
Q ss_pred ChHHHHHHHHhCCccCCC----------------------------------------CcccCCCHHHHHHHHHhcccCc
Q 009091 300 TEKGIFDAILKGGVDFES----------------------------------------EPWLLISDSAKDLVRKMLIQDP 339 (544)
Q Consensus 300 ~~~~~~~~i~~~~~~~~~----------------------------------------~~~~~~~~~~~~li~~~l~~dp 339 (544)
........+.......+. ......+..+.+||.+||+.||
T Consensus 243 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 243 ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred CHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 766554443321111100 0001124578899999999999
Q ss_pred CCCCChhhhhCCCccccC
Q 009091 340 KKRITSAEVLEHPWMREG 357 (544)
Q Consensus 340 ~~Rps~~ell~hp~f~~~ 357 (544)
.+|||++++|+||||+..
T Consensus 323 ~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 323 AQRITLAEALLHPFFAGL 340 (355)
T ss_dssp TTSCCHHHHTTSGGGGGC
T ss_pred hhCcCHHHHhcChhhcCC
Confidence 999999999999999875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-45 Score=358.36 Aligned_cols=255 Identities=25% Similarity=0.449 Sum_probs=207.5
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----- 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----- 166 (544)
+.++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+.+++++. ||||+++++++..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLN-HQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchh
Confidence 346799999999999999999999999999999998542 344577889999999997 9999999998864
Q ss_pred --------CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 167 --------RQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 167 --------~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
.+.+++||||+++++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+|||++ .++.+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~---~~~~~ 155 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNV 155 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCE
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc---CCCCE
Confidence 457899999999999999998654 578899999999999999999999999999999999994 45579
Q ss_pred EEeecCCcccccCC---------------CceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCC
Q 009091 238 KATDFGLSVFIDEG---------------KVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAET 300 (544)
Q Consensus 238 kl~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~ 300 (544)
||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++ ||....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999999865421 12234579999999999863 58999999999999999998 665432
Q ss_pred -hHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 301 -EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 301 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.......+......++.......++.+.++|.+||+.||.+|||+.++++||||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 234455555554444444444567889999999999999999999999999999764
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=358.81 Aligned_cols=262 Identities=25% Similarity=0.440 Sum_probs=212.6
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC-CCCeeEEEEEEEeC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG-QQNIVEFRGAYEDR 167 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~~ 167 (544)
.....++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+.+|+.+++++.+ ||||+++++++...
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~ 100 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence 4445567999999999999999999986 58899999986543 234556788999999999984 69999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+.+++||| +.+++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++. +.+||+|||++..
T Consensus 101 ~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~----~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 101 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQ 175 (313)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCC
T ss_pred CEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC----CeEEEeecccccc
Confidence 99999999 557899999999889999999999999999999999999999999999999943 4799999999987
Q ss_pred ccCCCc---eecccCCccccCcccccc------------cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhC
Q 009091 248 IDEGKV---YRDIVGSAYYVAPEVLRR------------SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKG 311 (544)
Q Consensus 248 ~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~ 311 (544)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+...
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCT
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhc
Confidence 654321 234579999999998753 5788999999999999999999999765432 334444443
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
......+ ...+..+.++|.+||+.||.+|||+.++|+||||+....
T Consensus 256 ~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 256 NHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp TSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred ccccCCc--ccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence 3322222 245889999999999999999999999999999987543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=365.52 Aligned_cols=258 Identities=31% Similarity=0.532 Sum_probs=215.3
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---hcHHHHHHHHHHHHhcc-CCCCeeEEEEE
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQIMQHLS-GQQNIVEFRGA 163 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~E~~~l~~l~-~h~~iv~~~~~ 163 (544)
..+.+.++|++++.||+|+||.||+|.+..+++.||||++........ .....+.+|+.+++++. +|+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 344566779999999999999999999999999999999976543221 12245668999999997 37999999999
Q ss_pred EEeCCeEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeec
Q 009091 164 YEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 164 ~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
+...+..++|||++.+ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++. ..+.+||+||
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~Df 194 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDF 194 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCC
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEeeC
Confidence 9999999999999976 899999998889999999999999999999999999999999999999963 3357999999
Q ss_pred CCcccccCCCceecccCCccccCcccccc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 243 GLSVFIDEGKVYRDIVGSAYYVAPEVLRR-S-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 243 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
|++...... ......||+.|+|||++.+ . ++.++|||||||++|+|++|..||.... .+......++
T Consensus 195 g~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~---- 263 (320)
T 3a99_A 195 GSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR---- 263 (320)
T ss_dssp TTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCS----
T ss_pred ccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhccccccc----
Confidence 999876543 2345679999999998863 3 4678999999999999999999996532 2233332222
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..+++++.+||.+||+.||.+|||++++++||||++..
T Consensus 264 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 35799999999999999999999999999999998754
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=371.32 Aligned_cols=254 Identities=26% Similarity=0.366 Sum_probs=210.0
Q ss_pred cccccceecceecccCCeEEEEEE-----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
...++|++++.||+|+||.||+|. +..+++.||||++.... .....+.+.+|+.++.++.+||||+++++++.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 345779999999999999999998 55667899999985432 33445678999999999977999999999998
Q ss_pred eCC-eEEEEEeccCCCChHHHHHHcCC-----------------------------------------------------
Q 009091 166 DRQ-SVHLVMELCSGGELFDKIIAQGH----------------------------------------------------- 191 (544)
Q Consensus 166 ~~~-~~~lv~e~~~~~~L~~~l~~~~~----------------------------------------------------- 191 (544)
..+ .+++||||+++|+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 755 48999999999999999976543
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC---cee
Q 009091 192 -------------YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYR 255 (544)
Q Consensus 192 -------------~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---~~~ 255 (544)
+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... ...
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~ 253 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKG 253 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC-
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhcc
Confidence 88999999999999999999999999999999999994 44579999999998664332 223
Q ss_pred cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHH
Q 009091 256 DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333 (544)
Q Consensus 256 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 333 (544)
...||+.|+|||++. ..++.++|||||||++|+|++ |..||.+...................+ ..+++++.++|.+
T Consensus 254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~ 331 (359)
T 3vhe_A 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYTTPEMYQTMLD 331 (359)
T ss_dssp -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCC--TTCCHHHHHHHHH
T ss_pred ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCC--CCCCHHHHHHHHH
Confidence 457889999999885 568999999999999999998 999998876555444444333322222 3578999999999
Q ss_pred hcccCcCCCCChhhhhCC
Q 009091 334 MLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 334 ~l~~dp~~Rps~~ell~h 351 (544)
||+.||.+|||+.++++|
T Consensus 332 ~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 332 CWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HccCChhhCCCHHHHHHH
Confidence 999999999999999876
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=366.77 Aligned_cols=261 Identities=26% Similarity=0.409 Sum_probs=212.5
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...+.
T Consensus 20 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 97 (353)
T 3coi_A 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASS 97 (353)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred cccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCcccHhheEecccc
Confidence 445678999999999999999999999999999999985532 23445677889999999997 9999999999987653
Q ss_pred ------EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 170 ------VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 170 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
+++||||+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 98 ~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg 171 (353)
T 3coi_A 98 LRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFG 171 (353)
T ss_dssp GGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTCCEEECSTT
T ss_pred cccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---CCCcEEEeecc
Confidence 599999997 58887763 3599999999999999999999999999999999999994 45579999999
Q ss_pred CcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc--------
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV-------- 313 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~-------- 313 (544)
++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+.....
T Consensus 172 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 172 LARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp CTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred cccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865432 235689999999998754 589999999999999999999999998877665555433100
Q ss_pred ---------------cCC----CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 314 ---------------DFE----SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 314 ---------------~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
..+ ......+++.+.+||.+||+.||.+|||++++|+||||+....+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~ 315 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP 315 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCc
Confidence 000 11123568999999999999999999999999999999875443
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=355.54 Aligned_cols=255 Identities=26% Similarity=0.428 Sum_probs=206.7
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 175 (544)
|.....||+|+||.||+|.+..++..||+|++... .....+.+.+|+.+++.+. ||||+++++++...+..++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCcEEEEEE
Confidence 44445899999999999999999999999998643 2344577889999999997 9999999999999999999999
Q ss_pred ccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 176 LCSGGELFDKIIAQG---HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 176 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|+++++|.+++.... .+++..++.++.|++.||.|||+.||+||||||+|||++.. ++.+||+|||++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT--TCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECC--CCCEEEeecccccccCCCC
Confidence 999999999998752 46789999999999999999999999999999999999642 3479999999998765422
Q ss_pred -ceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHhCCccCCCCcccCCCHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGI-FDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||........ ........ ........+++++
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 255 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--VHPEIPESMSAEA 255 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--CCCCCCTTSCHHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--ccccccccCCHHH
Confidence 2345679999999999853 378999999999999999999999976543321 11111111 1112223579999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.+||.+||+.||.+|||+.++|+||||+...
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999999999998654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=366.89 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=215.1
Q ss_pred ccccccceecceecccCCeEEEEEEECCC-------CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENST-------GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRG 162 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 162 (544)
+...++|.+++.||+|+||+||+|.+..+ +..||+|++... ........+.+|+.+++++.+||||+++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 142 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLG 142 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence 34457899999999999999999997543 357999988543 234556788999999999955999999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCce
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENF 226 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Ni 226 (544)
++...+.+++||||+++|+|.+++.... .+++..++.++.||+.||.|||+.||+||||||+||
T Consensus 143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 222 (382)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceE
Confidence 9999999999999999999999998754 489999999999999999999999999999999999
Q ss_pred eeecCCCCccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCh
Q 009091 227 LLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETE 301 (544)
Q Consensus 227 ll~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~ 301 (544)
|++ .++.+||+|||++....... ......||+.|+|||++. ..++.++|||||||++|+|++ |..||.+...
T Consensus 223 ll~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 223 LVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp EEC---TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred EEc---CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 994 44579999999998765432 223346788999999875 458999999999999999999 9999998888
Q ss_pred HHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 302 KGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 302 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
......+..+.... ....+++++.+||.+||+.||.+|||+.+++++
T Consensus 300 ~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 300 EELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 87777776653322 123579999999999999999999999999874
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=361.73 Aligned_cols=259 Identities=22% Similarity=0.313 Sum_probs=197.3
Q ss_pred cccccceecceecccCCeEEEEEEECCCCC---eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
...++|++++.||+|+||.||+|.+..++. .||||++..... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRS 97 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCC-CTTBCCCCEEEECC
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCC-CCceehhhceeecc
Confidence 345679999999999999999999887765 899998865432 3345678899999999996 99999999999876
Q ss_pred CeE------EEEEeccCCCChHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 168 QSV------HLVMELCSGGELFDKIIAQG------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 168 ~~~------~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
... ++||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~---~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc---CCC
Confidence 654 99999999999999986543 589999999999999999999999999999999999994 456
Q ss_pred cEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHh
Q 009091 236 MLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILK 310 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~ 310 (544)
.+||+|||++......... ....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~ 254 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc
Confidence 7999999999876543221 2345778999999886 458999999999999999999 9999998888888877766
Q ss_pred CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCC-------hhhhhCCCccccC
Q 009091 311 GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT-------SAEVLEHPWMREG 357 (544)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-------~~ell~hp~f~~~ 357 (544)
+..... ...+++.+.+||.+||+.||.+||| .+++++|||+...
T Consensus 255 ~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 255 GNRLKQ---PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp TCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred CCCCCC---CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 543222 2357899999999999999999999 7778999999764
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=360.46 Aligned_cols=245 Identities=23% Similarity=0.380 Sum_probs=205.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++++.||+|+||+||+|.+..++..||+|++.. ......+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC---CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEE
Confidence 3569999999999999999999999999999998843 23556678999999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC--
T ss_pred EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccc
Confidence 9999999999999987 5679999999999999999999999999999999999999 44567999999999876432
Q ss_pred Cce---------------ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH-----HHHHHHh
Q 009091 252 KVY---------------RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG-----IFDAILK 310 (544)
Q Consensus 252 ~~~---------------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~-----~~~~i~~ 310 (544)
... ...+||+.|+|||++. ..++.++|||||||++|+|++|..||....... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 211 1457999999999886 458999999999999999999999986532211 1111111
Q ss_pred CCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 311 GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.. ....+++.+.++|.+||+.||.+|||+.++++
T Consensus 242 ~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 242 RY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11 11257889999999999999999999999975
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=346.80 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=212.5
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 79 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS----MSEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIY 79 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT----BCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC----CcHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceE
Confidence 4567999999999999999999876 56789999985432 23467899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||+++++|.+++...+ .+++..++.++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecch
Confidence 9999999999999998754 49999999999999999999999999999999999999 4455799999999987655
Q ss_pred CCce--ecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKVY--RDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.... ....||+.|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+...... ..+++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLASDT 233 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcChHH
Confidence 4322 23456778999999864 68999999999999999999 99999988888777776665433222 346899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+.++|.+||+.||.+|||+.+++++
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999876
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=355.96 Aligned_cols=262 Identities=25% Similarity=0.333 Sum_probs=196.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
....++|++.+.||+|+||.||+|.+..+++.||||++..... .......+..+..+++.+. ||||+++++++...+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~ 98 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHD-CPYIVQCFGTFITNTD 98 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEECSSE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcC-CCceeeEEEEEecCCc
Confidence 3345679999999999999999999999999999999865431 1222233444445566665 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 170 VHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+++||||+ ++.+..+... ...+++..++.++.|++.||.|||+. ||+||||||+|||++ .++.+||+|||++..
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTSCEEECCCTTC--
T ss_pred EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCCCEEEEECCCchh
Confidence 99999999 5555555543 56799999999999999999999995 999999999999994 455799999999987
Q ss_pred ccCCCceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhCCccCCCCcc
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~ 320 (544)
...........||+.|+|||++. ..++.++|||||||++|+|++|..||... ........+....... .+..
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 253 (318)
T 2dyl_A 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL-LPGH 253 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC-CCSS
T ss_pred ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC-CCcc
Confidence 66554445568999999999983 35789999999999999999999999874 4445556665553322 2223
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
..+++++.+||.+||+.||.+||+++++++||||+...
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE 291 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence 35799999999999999999999999999999998653
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=362.77 Aligned_cols=258 Identities=29% Similarity=0.523 Sum_probs=204.0
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---hcHHHHHHHHHHHHhcc---CCCCeeEEEE
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQIMQHLS---GQQNIVEFRG 162 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~E~~~l~~l~---~h~~iv~~~~ 162 (544)
.+.+.++|++.+.||+|+||.||+|.+..+++.||||++........ .....+.+|+.++.++. +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 45566779999999999999999999999999999999865432211 12234567999999983 4999999999
Q ss_pred EEEeCCeEEEEEec-cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 163 AYEDRQSVHLVMEL-CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 163 ~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
++...+..++|||+ +.+++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++. .++.+||+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~d 183 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLID 183 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEECC
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEEEE
Confidence 99999999999999 789999999998888999999999999999999999999999999999999962 335799999
Q ss_pred cCCcccccCCCceecccCCccccCcccccc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLRR-SY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
||++....... .....||+.|+|||++.+ .+ +.++|||||||++|+|++|+.||.... .+......++
T Consensus 184 fg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~--- 253 (312)
T 2iwi_A 184 FGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP--- 253 (312)
T ss_dssp CSSCEECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC---
T ss_pred cchhhhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc---
Confidence 99998765533 345679999999998864 33 458999999999999999999996531 2233333322
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
..+++.+.+||.+||+.||.+|||++++++||||+...+
T Consensus 254 -~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 254 -AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred -ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 357899999999999999999999999999999987643
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=362.85 Aligned_cols=253 Identities=18% Similarity=0.197 Sum_probs=205.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++.+.||+|+||+||+|.+..+++.||||++.... ..+.+.+|+.+++++.+||||+++++++...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-----RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-----SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-----chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 4567999999999999999999999999999999885432 22357899999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC--CccEEEeecCCcccc
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG--GAMLKATDFGLSVFI 248 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~--~~~vkl~Dfg~a~~~ 248 (544)
+||||+ +++|.+++.. .+.+++..++.++.||+.||.|||+.||+||||||+|||++.++. ...+||+|||++...
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999999 8999999987 467999999999999999999999999999999999999954321 123999999999876
Q ss_pred cCCCc--------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHhCCccCC
Q 009091 249 DEGKV--------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE---KGIFDAILKGGVDFE 316 (544)
Q Consensus 249 ~~~~~--------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~---~~~~~~i~~~~~~~~ 316 (544)
..... .....||+.|+|||++. ..++.++|||||||++|||++|..||.+... ...+..+.......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP 240 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence 44321 23568999999999886 4589999999999999999999999987543 333444433322222
Q ss_pred CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 317 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
........+++.++|..||+.||.+||++++|++
T Consensus 241 ~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 241 IEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 2111112339999999999999999999988764
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=354.82 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=204.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCeEEEE
Confidence 45999999999999999999999999999999986654444555678999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||++|++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCccCcccccccc
Confidence 99999999999999888899999999999999999999999999999999999994 44579999999998765432
Q ss_pred -ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 253 -VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 253 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......||+.|+|||++. ..++.++||||||+++|+|++|..||.......... ........+......+++.+.++
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l 268 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA-HINQAIPRPSTVRPGIPVAFDAV 268 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH-HHHSCCCCGGGTSTTCCTHHHHH
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH-HhccCCCCccccCCCCCHHHHHH
Confidence 223457999999999885 558999999999999999999999998766553333 33333332223334689999999
Q ss_pred HHHhcccCcCCCC-ChhhhhC
Q 009091 331 VRKMLIQDPKKRI-TSAEVLE 350 (544)
Q Consensus 331 i~~~l~~dp~~Rp-s~~ell~ 350 (544)
|.+||+.||.+|| +++++++
T Consensus 269 i~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 269 IARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHhccCCHHHHHHhHHHHHH
Confidence 9999999999999 7777654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=361.21 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=190.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ-IMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
.++|++.+.||+|+||.||+|.+..+++.||||++.... .......+..|+. +++.+ +||||+++++++...+..+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEeCCceE
Confidence 456999999999999999999999999999999986532 2334455666776 45555 4999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 172 LVMELCSGGELFDKIIA-----QGHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
+||||+++ +|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+|||++ .++.+||+|||++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGIS 173 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTTEEEECCCSSS
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCCCEEEccCCCc
Confidence 99999975 88887764 56799999999999999999999998 999999999999995 4457999999999
Q ss_pred ccccCCCceecccCCccccCccccc-----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCc-cCCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR-----RSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGV-DFESE 318 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~-~~~~~ 318 (544)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+.. .+...
T Consensus 174 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3aln_A 174 GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253 (327)
T ss_dssp CC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred eecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence 8776544444558999999999973 45889999999999999999999999764321 12222222211 12222
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
....+++.+.+||.+||+.||.+|||+.++++||||....
T Consensus 254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 2345789999999999999999999999999999998654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=347.33 Aligned_cols=247 Identities=24% Similarity=0.395 Sum_probs=211.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 82 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA----MSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICL 82 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc----cCHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEE
Confidence 356999999999999999999987 47789999985432 23467899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEecccccccccccc
Confidence 99999999999999764 4589999999999999999999999999999999999994 4457999999999866442
Q ss_pred C--ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 K--VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
. ......||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+.... ....+++.+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 236 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHV 236 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTSCHHH
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCC---CCCcCCHHH
Confidence 2 112345778899999986 568999999999999999999 999999888888877776653222 223578999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.++|.+||+.||.+|||+.++++|
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999999999999999875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=347.47 Aligned_cols=252 Identities=26% Similarity=0.377 Sum_probs=201.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
.++|++.+.||+|+||.||+|.+. +..||+|++....... ....+.+.+|+.+++.++ ||||+++++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLC 82 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceE
Confidence 356999999999999999999975 8899999886543221 234577889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---CEeecCCCCceeeecCC-----CCccEEEeecC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKD-----GGAMLKATDFG 243 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---ivHrDikp~Nill~~~~-----~~~~vkl~Dfg 243 (544)
+||||+++++|.+++. .+.+++..++.++.|++.||.|||++| |+||||||+|||++... ..+.+||+|||
T Consensus 83 lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999988874 567999999999999999999999999 99999999999996522 24679999999
Q ss_pred CcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
++........ ....||+.|+|||++. ..++.++||||||+++|+|++|..||.+.........+.......+.+ ..
T Consensus 162 ~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 238 (271)
T 3dtc_A 162 LAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP--ST 238 (271)
T ss_dssp C--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC--TT
T ss_pred cccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC--cc
Confidence 9986654332 3457999999999886 458999999999999999999999999888777776666655443332 36
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++.+.++|.+||+.||.+|||+.+++++
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 78999999999999999999999999864
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=355.64 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=213.4
Q ss_pred cccccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
...++|.+++.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~ 96 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVN-HPHVIKLYGACS 96 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCceeeEEEEEe
Confidence 34567999999999999999999973 455889999885432 3445677899999999997 999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCCEeecC
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQGH------------------------YTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~~------------------------~~~~~~~~~~~ql~~~l~~lH~~~ivHrDi 221 (544)
..+.+++||||+++++|.+++..... +++..++.++.||+.||.|||++||+||||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di 176 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDL 176 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccccc
Confidence 99999999999999999999987543 889999999999999999999999999999
Q ss_pred CCCceeeecCCCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCC
Q 009091 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPF 296 (544)
Q Consensus 222 kp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf 296 (544)
||+|||++. ++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++ |..||
T Consensus 177 kp~NIli~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 177 AARNILVAE---GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp SGGGEEEET---TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred chheEEEcC---CCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 999999954 457999999999876543322 2346788999999885 458999999999999999999 99999
Q ss_pred CCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 297 WAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 297 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.+.........+..+... .....+++.+.++|.+||+.||.+|||+.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 254 PGIPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp TTCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 988877777766654322 2223679999999999999999999999999864
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=361.52 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=214.0
Q ss_pred ccccccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
+...++|++.+.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++. ||||+++++++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~ 119 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVC 119 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE
Confidence 344567999999999999999999987 345889999885432 3445678899999999997 99999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeec
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQ------------------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrD 220 (544)
...+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|||
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D 199 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 199 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 9999999999999999999999774 5689999999999999999999999999999
Q ss_pred CCCCceeeecCCCCccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCC
Q 009091 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPP 295 (544)
Q Consensus 221 ikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~p 295 (544)
|||+|||++ .++.+||+|||++....... ......||+.|+|||++. ..++.++|||||||++|+|++ |..|
T Consensus 200 lkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 200 LATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCcceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 999999994 44579999999998654322 223457889999999875 568999999999999999999 9999
Q ss_pred CCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 296 FWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 296 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
|.+.........+..+..... ...+++.+.++|.+||+.||.+|||+.++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~ 328 (343)
T 1luf_A 277 YYGMAHEEVIYYVRDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFCSIHR 328 (343)
T ss_dssp TTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCChHHHHHHHhCCCcCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 999888888777776644221 2357899999999999999999999999875
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=349.70 Aligned_cols=247 Identities=21% Similarity=0.359 Sum_probs=209.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.+++++. ||||+++++++...+.+++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC----CCHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeEE
Confidence 456999999999999999999876 57789999985432 23467889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++++|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCCCEEEcccccccccccc
Confidence 9999999999999976 56799999999999999999999999999999999999994 4557999999999866442
Q ss_pred Cc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.. .....||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+..... ...+++.+
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 250 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKV 250 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHH
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---CCcCCHHH
Confidence 21 12345778899999886 568999999999999999998 9999998888877777766533222 23568999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.++|.+||+.||.+|||+.++++|
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHH
Confidence 999999999999999999999875
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=368.31 Aligned_cols=249 Identities=25% Similarity=0.388 Sum_probs=210.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|.+++.||+|+||.||+|.+..++..||||++... ......+.+.+|+.+|+++. ||||+++++++...+.++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCC-CTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEecCCCcEE
Confidence 46799999999999999999999999999999988532 22344456889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+++|+|.+++...+ .+++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADG 266 (377)
T ss_dssp EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCEECTTS
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCCcEEECcCCCceecCCC
Confidence 999999999999998754 599999999999999999999999999999999999994 4457999999999865443
Q ss_pred Ccee---cccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 252 KVYR---DIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 252 ~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.... ...+++.|+|||++. +.++.++|||||||++|||++ |..||...........+..+. ..+. ...+++.
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~ 343 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-RLPC--PELCPDA 343 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC-CCCC--CTTCCHH
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCC--CCCCCHH
Confidence 2211 123567899999886 568999999999999999998 999998888777766665543 2222 2357899
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.+||.+||+.||.+|||++++++
T Consensus 344 l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999999999999999999864
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=361.41 Aligned_cols=255 Identities=24% Similarity=0.387 Sum_probs=210.9
Q ss_pred ccccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..+.|.+++.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++.+||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 4567999999999999999999973 456689999986432 233456789999999999559999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCC
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG-----------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKP 223 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp 223 (544)
.+.+++||||+++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 200 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 999999999999999999997653 278999999999999999999999999999999
Q ss_pred CceeeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCC
Q 009091 224 ENFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWA 298 (544)
Q Consensus 224 ~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~ 298 (544)
+|||++ .++.+||+|||++........ .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+
T Consensus 201 ~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 201 RNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp GGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hhEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 999995 445899999999986643322 22346788999999875 568999999999999999998 9999988
Q ss_pred CChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 299 ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 299 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
.........+.........+ ..+++.+.+||.+||+.||.+|||+.++++|-.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 278 IPVDANFYKLIQNGFKMDQP--FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCCSHHHHHHHHTTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 77665555555554433332 357999999999999999999999999988644
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=352.34 Aligned_cols=252 Identities=25% Similarity=0.466 Sum_probs=199.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||.||+|.+..++..||+|++.............+.+|+.+++++. ||||+++++++...+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCcEEE
Confidence 356999999999999999999999999999999986544444556678899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 173 VMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
||||+++++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCCEEEEeccceeee
Confidence 9999999999998865 45689999999999999999999999999999999999994 4457999999999876
Q ss_pred cCCC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHhCCccCCCCcccCCC
Q 009091 249 DEGK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE--KGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 249 ~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.... ......|++.|+|||++. ..++.++||||||+++|+|++|..||.+... ......+..... +..+...++
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 264 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSDHYS 264 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS--CCCCTTTSC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC--CCCcccccC
Confidence 5432 223457999999999876 4588999999999999999999999976532 234444444332 222234679
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+++.+||.+||+.||.+|||+.++++
T Consensus 265 ~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 265 EELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999999999999999875
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=352.81 Aligned_cols=255 Identities=19% Similarity=0.271 Sum_probs=210.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+.+|+||+++++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 345677999999999999999999999999999999885432 234577899999999779999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC--CCccEEEeecCCcc
Q 009091 170 VHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--GGAMLKATDFGLSV 246 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--~~~~vkl~Dfg~a~ 246 (544)
.++||||+ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++.
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999999 999999998754 599999999999999999999999999999999999996542 23459999999998
Q ss_pred cccCCCc--------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHhCCcc
Q 009091 247 FIDEGKV--------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAET---EKGIFDAILKGGVD 314 (544)
Q Consensus 247 ~~~~~~~--------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~---~~~~~~~i~~~~~~ 314 (544)
....... .....||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.. ....+..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 7654322 23467999999999986 458999999999999999999999998743 33344444332221
Q ss_pred CCCC-cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 315 FESE-PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 315 ~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.+ ....+++++.++|.+||+.||.+||+++++++
T Consensus 240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 1111 11257899999999999999999999999864
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=359.33 Aligned_cols=260 Identities=23% Similarity=0.297 Sum_probs=215.9
Q ss_pred cccccceecceecccCCeEEEEEE-----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
...++|++.+.||+|+||.||+|. +..++..||||++... ........+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 103 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVSL 103 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCC-CCCCCeEEEEEc
Confidence 345679999999999999999999 5567889999998532 23445667889999999996 999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEE
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQG-------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vk 238 (544)
..+..++||||+++++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++.++....+|
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999999998753 488999999999999999999999999999999999997655566799
Q ss_pred EeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCc
Q 009091 239 ATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 239 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~ 313 (544)
|+|||++....... ......||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 263 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 263 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC
Confidence 99999997654322 223456899999999885 568999999999999999998 9999988887777777766543
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.. ....+++.+.++|.+||+.||.+||++.++++|.|+..
T Consensus 264 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 264 MD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 22 22357999999999999999999999999999988753
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=354.84 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=212.3
Q ss_pred cccccceecceecccCCeEEEEEEE-----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTE-----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
...++|++++.||+|+||.||+|.+ ..++..||+|++.... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 3456799999999999999999985 4567899999985432 23456788999999999955999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCcee
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQG------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nil 227 (544)
..+..++||||+++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence 9999999999999999999998754 3899999999999999999999999999999999999
Q ss_pred eecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChH
Q 009091 228 LSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEK 302 (544)
Q Consensus 228 l~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~ 302 (544)
++. ++.+||+|||++........ .....||+.|+|||++. ..++.++||||||+++|+|++ |..||.+....
T Consensus 178 ~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 178 LTH---GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp EET---TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred EcC---CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 954 45799999999987654332 22345788999999875 568999999999999999999 99999887665
Q ss_pred HHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 303 GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 303 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
............... ...+++.+.++|.+||+.||.+|||+.+++++
T Consensus 255 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 255 SKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHhccCCCCCC--cccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 555444444333222 23578999999999999999999999998864
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=348.04 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=206.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhc----HHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~----~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.++|++.+.||+|+||+||+|.+..+++.||+|++.......... .+.+.+|+.+++++. ||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC-CTTBCCEEEEETTTT
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC-CCCchhhheeecCCC
Confidence 456999999999999999999999999999999986543322221 167889999999997 999999999987665
Q ss_pred eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCC--CccEEEeecC
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDG--GAMLKATDFG 243 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~--~~~vkl~Dfg 243 (544)
++||||+++++|.+.+... ..+++..++.++.|++.||.|||+.| |+||||||+|||++..+. ...+||+|||
T Consensus 97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 6999999999999888764 46999999999999999999999999 999999999999964331 2349999999
Q ss_pred CcccccCCCceecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHH--HHHHHhCCccCCCC
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGI--FDAILKGGVDFESE 318 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~--~~~i~~~~~~~~~~ 318 (544)
++..... ......||+.|+|||++. ..++.++|||||||++|+|++|..||........ ...+........
T Consensus 175 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-- 250 (287)
T 4f0f_A 175 LSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-- 250 (287)
T ss_dssp TCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC--
T ss_pred ccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC--
Confidence 9985543 334568999999999983 3478899999999999999999999987654433 344444433322
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
....+++.+.++|.+||+.||.+|||+.++++
T Consensus 251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 22367999999999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=348.76 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=200.6
Q ss_pred ccccccceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
+...++|++++.||+|+||.||+|.+..+ +..||+|++... ......+.+.+|+.+++++. ||||+++++++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~- 86 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT- 86 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCC-CCccceEEEEEc-
Confidence 44567899999999999999999998654 446999987432 23445677899999999997 999999999984
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
.+..++||||+++++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~ 163 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLS 163 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECC----
T ss_pred cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC---CCEEECccccc
Confidence 567889999999999999998754 69999999999999999999999999999999999999653 47999999999
Q ss_pred ccccCCCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 246 VFIDEGKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 246 ~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
........ .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..+... +...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~ 240 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPP 240 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCT
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCC
Confidence 87654322 22345778999999886 568999999999999999996 99999988888777777665322 1223
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+++.+.++|.+||+.||.+|||+.++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 67999999999999999999999999875
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=366.73 Aligned_cols=260 Identities=23% Similarity=0.389 Sum_probs=207.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC----------CCCeeEEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG----------QQNIVEFRG 162 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~----------h~~iv~~~~ 162 (544)
.++|++.+.||+|+||+||+|.+..+++.||||++... ....+.+.+|+.+++++.+ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 45799999999999999999999999999999998532 3345678899999998862 789999999
Q ss_pred EEEeCC----eEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCEeecCCCCceeeecC---C
Q 009091 163 AYEDRQ----SVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFM-GVMHRDLKPENFLLSNK---D 232 (544)
Q Consensus 163 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~-~ivHrDikp~Nill~~~---~ 232 (544)
++...+ .+++||||+ +++|.+++... ..+++..++.++.||+.||.|||++ ||+||||||+|||++.. +
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 987654 789999999 88999999873 4599999999999999999999998 99999999999999643 2
Q ss_pred CCccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh------HHHH
Q 009091 233 GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE------KGIF 305 (544)
Q Consensus 233 ~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~------~~~~ 305 (544)
....+||+|||++...... .....||+.|+|||++. ..++.++|||||||++|+|++|..||..... ...+
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 3457999999999876542 23458999999999886 4589999999999999999999999976542 2222
Q ss_pred HHHHhCCccCC--------------------------------------CCcccCCCHHHHHHHHHhcccCcCCCCChhh
Q 009091 306 DAILKGGVDFE--------------------------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347 (544)
Q Consensus 306 ~~i~~~~~~~~--------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e 347 (544)
..+.......+ ......+++++.+||.+||+.||.+|||+++
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 22221100000 0001124568899999999999999999999
Q ss_pred hhCCCccccCCC
Q 009091 348 VLEHPWMREGGE 359 (544)
Q Consensus 348 ll~hp~f~~~~~ 359 (544)
+|+||||++...
T Consensus 331 ll~hp~f~~~~~ 342 (373)
T 1q8y_A 331 LVNHPWLKDTLG 342 (373)
T ss_dssp HHTCGGGTTCTT
T ss_pred HhhChhhhcccC
Confidence 999999997643
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=357.63 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=207.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeE--EEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSY--ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.|++.+.||+|+||.||+|.+..++..+ |+|.+... ......+.+.+|+.+++++.+||||+++++++...+.++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 45999999999999999999999888865 88887542 233445678899999999955999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 172 LVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---CCC
Confidence 9999999999999997654 689999999999999999999999999999999999994 445
Q ss_pred cEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCc
Q 009091 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~ 313 (544)
.+||+|||++.............+++.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..+..
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 79999999987543322233446788999999886 457999999999999999998 9999998888777776655422
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
. .....+++.+.+||.+||..||.+|||+++++++
T Consensus 260 -~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 -L--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp -C--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -C--CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1 2223578999999999999999999999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=369.19 Aligned_cols=257 Identities=23% Similarity=0.398 Sum_probs=210.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-- 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 168 (544)
...++|++.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 82 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCC
Confidence 456789999999999999999999999999999999864332 334577889999999997 999999999998755
Q ss_pred eEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec-CCCCccEEEeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN-KDGGAMLKATDFGL 244 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~-~~~~~~vkl~Dfg~ 244 (544)
..++||||++|++|.+++..... +++..++.++.||+.||.|||+.||+||||||+|||+.. .+....+||+|||+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 78999999999999999876433 999999999999999999999999999999999999832 23456799999999
Q ss_pred cccccCCCceecccCCccccCccccc---------ccCCCcchHHHHHHHHHHHhhCCCCCCCC----ChHHHHHHHHhC
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR---------RSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGIFDAILKG 311 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~~l~el~tg~~pf~~~----~~~~~~~~i~~~ 311 (544)
+.............||+.|+|||++. ..++.++|||||||++|||++|..||... .....+..+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 98876655555678999999999875 35788999999999999999999999643 233455555554
Q ss_pred CccCCC-----------------C----cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 312 GVDFES-----------------E----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 312 ~~~~~~-----------------~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
...... + ....+++.+.++|.+||+.||.+||++.++++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 321100 0 01123567889999999999999999998743
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=369.02 Aligned_cols=256 Identities=27% Similarity=0.435 Sum_probs=199.7
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.+.|.+.+.||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.+++++.+||||+++++++...+.+
T Consensus 12 ~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 84 (434)
T 2rio_A 12 SLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFL 84 (434)
T ss_dssp SCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred hhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeE
Confidence 345668888999999999998754 457999999988532 2456789999999885699999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCC-------HHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecC----------CC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYT-------EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK----------DG 233 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~-------~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~----------~~ 233 (544)
+||||||. |+|.+++....... +..++.++.||+.||.|||++||+||||||+|||++.. +.
T Consensus 85 ~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 85 YIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp EEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCC
Confidence 99999996 59999997654332 23457899999999999999999999999999999653 24
Q ss_pred CccEEEeecCCcccccCCCc-----eecccCCccccCccccc--------ccCCCcchHHHHHHHHHHHhh-CCCCCCCC
Q 009091 234 GAMLKATDFGLSVFIDEGKV-----YRDIVGSAYYVAPEVLR--------RSYGKEIDVWSAGVILYILLS-GVPPFWAE 299 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~~l~el~t-g~~pf~~~ 299 (544)
...+||+|||++........ ....+||+.|+|||++. ..++.++|||||||++|||++ |..||...
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 46899999999987754321 23457999999999885 347899999999999999999 99999765
Q ss_pred ChHHHHHHHHhCCccCCCCc---ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 300 TEKGIFDAILKGGVDFESEP---WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 300 ~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.... ..+..+....+... ...+++++.+||.+||+.||.+|||+.++++||||+.
T Consensus 244 ~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 244 YSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp TTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred hhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 4433 34444443333221 1234578999999999999999999999999999974
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=372.42 Aligned_cols=255 Identities=25% Similarity=0.383 Sum_probs=197.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|.+.+.||+|+||+||. ....+++.||||++..... ..+.+|+.+|+.+.+||||+++++++.+.+.+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 4599999999999999764 3446789999999854321 23468999999996699999999999999999999
Q ss_pred EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC--CCccEEEeecCCcccccC
Q 009091 174 MELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--GGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--~~~~vkl~Dfg~a~~~~~ 250 (544)
||||. |+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..+ ....+||+|||++.....
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 99996 59999987654 355666789999999999999999999999999999996432 335688999999987654
Q ss_pred CC----ceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 251 GK----VYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 251 ~~----~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
.. .....+||+.|+|||++. ..++.++|||||||++|||++ |..||......... .+..........+..
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~ 254 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-ILLGACSLDCLHPEK 254 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-HHTTCCCCTTSCTTC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-HHhccCCccccCccc
Confidence 32 223467999999999985 346789999999999999999 89998665443332 222211111111222
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
..+..+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 345678999999999999999999999999999753
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=351.43 Aligned_cols=248 Identities=16% Similarity=0.219 Sum_probs=206.0
Q ss_pred cccceecceecccCCeEEEEEEECCCC-------CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTG-------NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.++|.+.+.||+|+||+||+|.+..++ ..||+|++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLS-HKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSC-CTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEE
Confidence 467999999999999999999998777 46999988543 2445678999999999997 999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCC-----ccEEE
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG-----AMLKA 239 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~-----~~vkl 239 (544)
..+..++||||++|++|.+++...+. +++..++.++.||+.||.|||++||+||||||+|||++.++.. ..+||
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999999987654 9999999999999999999999999999999999999765421 12999
Q ss_pred eecCCcccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC
Q 009091 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 317 (544)
+|||++...... ....||+.|+|||++. ..++.++|||||||++|+|++|..|+...................+.
T Consensus 163 ~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (289)
T 4fvq_A 163 SDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA 239 (289)
T ss_dssp CCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC
T ss_pred ccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC
Confidence 999998765432 2356899999999886 45899999999999999999966555554444433344443333332
Q ss_pred CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 318 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..++++.+||.+||+.||.+|||+.++++|
T Consensus 240 ----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 240 ----PKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp ----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ----CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 357889999999999999999999999875
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=354.14 Aligned_cols=260 Identities=23% Similarity=0.350 Sum_probs=217.9
Q ss_pred cccccccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEE
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA 163 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 163 (544)
.+...++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+. ||||++++++
T Consensus 20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~ 96 (322)
T 1p4o_A 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGV 96 (322)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEEE
T ss_pred hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcC-CCCEeeeEEE
Confidence 3445678999999999999999999876 457889999885432 3344567889999999997 9999999999
Q ss_pred EEeCCeEEEEEeccCCCChHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 164 YEDRQSVHLVMELCSGGELFDKIIAQ----------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 164 ~~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
+...+..++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~---~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---E 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---T
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc---C
Confidence 99999999999999999999998753 3568999999999999999999999999999999999994 4
Q ss_pred CccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 009091 234 GAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i 308 (544)
++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 253 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence 557999999999866543221 2345788999999886 568999999999999999999 89999888887777777
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC------CccccC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH------PWMREG 357 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h------p~f~~~ 357 (544)
..+..... ...+++.+.++|.+||+.||.+|||+.++++| +||++.
T Consensus 254 ~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~ 305 (322)
T 1p4o_A 254 MEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305 (322)
T ss_dssp HTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred HcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccc
Confidence 66543222 23578999999999999999999999999875 666543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=355.90 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=201.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeE----EEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSY----ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~----avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.++|++.+.||+|+||+||+|.+..++..+ |+|.+... ........+.+|+.+++++. ||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc--cCHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC
Confidence 456999999999999999999998888765 55555322 22345678899999999997 999999999998754
Q ss_pred eEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.++|+||+.+|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---PQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---TTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC---CCCEEEccCcceeE
Confidence 7899999999999999987 456999999999999999999999999999999999999954 34799999999987
Q ss_pred ccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 248 IDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 248 ~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
...... .....||+.|+|||++. ..++.++|||||||++|||++ |..||.+.........+..+.. .+. ...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~ 243 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQ--PPI 243 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-CCC--CTT
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCC-CCC--Ccc
Confidence 654322 12345688999999875 568999999999999999999 9999988877777666655432 222 235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
++..+.++|.+||+.||.+|||+.+++++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 78999999999999999999999999864
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=353.69 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=212.1
Q ss_pred ccccceecceecccCCeEEEEEEEC-------CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTEN-------STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
..++|++++.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++++.+||||+++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 3467999999999999999999975 457789999885432 3445677899999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceee
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLL 228 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill 228 (544)
...+.+++||||+++++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||+
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 99999999999999999999998654 38899999999999999999999999999999999999
Q ss_pred ecCCCCccEEEeecCCcccccCCCce---ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHH
Q 009091 229 SNKDGGAMLKATDFGLSVFIDEGKVY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303 (544)
Q Consensus 229 ~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~ 303 (544)
+ .++.+||+|||++......... ....+|+.|+|||++. ..++.++|||||||++|+|++ |..||.+.....
T Consensus 191 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 267 (334)
T 2pvf_A 191 T---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267 (334)
T ss_dssp C---TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred c---CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence 4 4457999999999876553321 2345788999999875 568999999999999999999 999999888877
Q ss_pred HHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
....+..+.... ....+++.+.++|.+||+.||.+|||+.+++++
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 268 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 777766653221 223578999999999999999999999998864
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=350.71 Aligned_cols=250 Identities=23% Similarity=0.355 Sum_probs=200.8
Q ss_pred cccccceecceecccCCeEEEEEE----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
...++|++.+.||+|+||+||+|+ +..++..||||++... .....+.+.+|+.+++++. ||||+++++++..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 82 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYS 82 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECH
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec
Confidence 345679999999999999999998 5678999999988532 3445678899999999997 9999999999854
Q ss_pred --CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 167 --RQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 167 --~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
...+++||||+++++|.+++.... .+++..++.++.|++.||.|||+.||+||||||+|||++.+ +.+||+|||
T Consensus 83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg 159 (295)
T 3ugc_A 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---NRVKIGDFG 159 (295)
T ss_dssp HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCC
T ss_pred CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCC---CeEEEccCc
Confidence 456899999999999999998754 49999999999999999999999999999999999999544 479999999
Q ss_pred CcccccCCC----ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH----------------
Q 009091 244 LSVFIDEGK----VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK---------------- 302 (544)
Q Consensus 244 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---------------- 302 (544)
++....... ......|+..|+|||++. ..++.++||||||+++|+|++|..||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 998765432 122345778899999886 56899999999999999999999998643221
Q ss_pred HHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 303 GIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 303 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.....+.. ....+ ....+++++.+||.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~-~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 240 HLIELLKN-NGRLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHHHT-TCCCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhc-cCcCC--CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 11222222 22222 22367999999999999999999999999874
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=347.67 Aligned_cols=245 Identities=33% Similarity=0.602 Sum_probs=197.0
Q ss_pred ccccceec-ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 009091 92 IRQFYTLG-KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED---- 166 (544)
Q Consensus 92 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 166 (544)
+.+.|.+. +.||+|+||.||+|.+..++..||+|++.. ...+.+|+.++.++.+||||+++++++..
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 33446665 789999999999999999999999998843 23567899998666679999999999876
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...++|||||++|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 678999999999999999998764 599999999999999999999999999999999999997654467899999999
Q ss_pred cccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHH----HhCCccCCCCcc
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI----LKGGVDFESEPW 320 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i----~~~~~~~~~~~~ 320 (544)
+..... ..++.++|||||||++|+|++|..||...........+ ......++.+.+
T Consensus 167 a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (299)
T 3m2w_A 167 AKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226 (299)
T ss_dssp CEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHH
T ss_pred cccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhc
Confidence 865432 34677899999999999999999999765543322111 112222222222
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
..+++++.+||.+||+.||.+|||+.++|+||||+........+
T Consensus 227 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~ 270 (299)
T 3m2w_A 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270 (299)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred ccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence 46799999999999999999999999999999998765544433
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=364.03 Aligned_cols=256 Identities=16% Similarity=0.169 Sum_probs=193.4
Q ss_pred ccccceecceecccCCeEEEEEEECCC-----CCeEEEEEEeeccccCh--------hcHHHHHHHHHHHHhccCCCCee
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENST-----GNSYACKSILKRKLVNK--------QDREDIKREIQIMQHLSGQQNIV 158 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~--------~~~~~~~~E~~~l~~l~~h~~iv 158 (544)
..+.|++++.||+|+||.||+|.+..+ ++.||||++........ .....+..|+..+..+. ||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~~iv 111 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK-YLGVP 111 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS-CCCSC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc-CCCCC
Confidence 345799999999999999999998764 57899998854321000 00012233444555554 99999
Q ss_pred EEEEEEEeC----CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC
Q 009091 159 EFRGAYEDR----QSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG 233 (544)
Q Consensus 159 ~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~ 233 (544)
++++++... ...+|||||+ |++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.. .
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~-~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-N 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS-C
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC-C
Confidence 999998764 5689999999 99999999876 679999999999999999999999999999999999999632 3
Q ss_pred CccEEEeecCCcccccCCCc--------eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHH
Q 009091 234 GAMLKATDFGLSVFIDEGKV--------YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGI 304 (544)
Q Consensus 234 ~~~vkl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~ 304 (544)
.+.+||+|||+++....... .....||+.|+|||++.+ .++.++|||||||++|||++|..||.+......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 46799999999987643211 123469999999998864 589999999999999999999999986433222
Q ss_pred HHHHHhCCccCC-------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 FDAILKGGVDFE-------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 ~~~i~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
............ ..+...+++++.++|..||..||.+||++.+|++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 111111000000 0011357899999999999999999999998864
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=380.34 Aligned_cols=253 Identities=26% Similarity=0.334 Sum_probs=206.2
Q ss_pred cccceecc-eecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGK-ELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.+.+.+.+ .||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+|++++ ||||+++++++.. +.
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-hpniv~l~~~~~~-~~ 409 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EA 409 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCC-CTTBCCEEEEEES-SS
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEecc-CC
Confidence 34455555 8999999999999875 345679999986532 3445678999999999997 9999999999976 56
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
++|||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++..
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~---~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN---RHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCCSTTTTC
T ss_pred eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcC---CCcEEEeeccCcccc
Confidence 89999999999999998754 45999999999999999999999999999999999999954 457999999999876
Q ss_pred cCCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
...... ....+++.|+|||++. +.++.++|||||||++|||++ |..||.+....+....+..+.. ... ...
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~-~~~--p~~ 563 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-MEC--PPE 563 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCC-CCC--CTT
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CCC--CCc
Confidence 433211 1234568899999986 679999999999999999998 9999999888888877766542 222 235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhh---CCCccc
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVL---EHPWMR 355 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell---~hp~f~ 355 (544)
+++++.+||.+||..||.+||++.+++ ++.|+.
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 899999999999999999999999974 455544
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=380.75 Aligned_cols=242 Identities=25% Similarity=0.290 Sum_probs=203.0
Q ss_pred ceecccCCeEEEEEEE--CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 100 KELGRGQFGITYLCTE--NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
+.||+|+||+||+|.+ ..++..||||++.... ......+.+.+|+.+|++++ ||||+++++++.. +.++|||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999954 4567889999886542 33455678999999999997 9999999999965 5588999999
Q ss_pred CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc----
Q 009091 178 SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV---- 253 (544)
Q Consensus 178 ~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---- 253 (544)
++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||||+. ++.+||+|||+++.......
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCTTHHHHTTC-------
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC---CCCEEEEEcCCccccccCcccccc
Confidence 99999999998888999999999999999999999999999999999999964 34799999999987654321
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....||+.|+|||++. ..++.++|||||||++|||++ |..||.+.........+..+... .. ...+++++.+||
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~-~~--p~~~~~~l~~li 605 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM-GC--PAGCPREMYDLM 605 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-CC--CTTCCHHHHHHH
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CC--CCCCCHHHHHHH
Confidence 22345678999999986 469999999999999999998 99999998888887777665432 22 235799999999
Q ss_pred HHhcccCcCCCCChhhhhC
Q 009091 332 RKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~ 350 (544)
..||+.||.+||++++|++
T Consensus 606 ~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHH
Confidence 9999999999999999864
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-44 Score=361.17 Aligned_cols=249 Identities=23% Similarity=0.385 Sum_probs=200.1
Q ss_pred cccceecceecccCCeEEEEEEEC---CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN---STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
..+|.+.+.||+|+||.||+|++. .++..||||++.... .....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCc
Confidence 457999999999999999999876 467789999885432 3445678999999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
++|||||+++++|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++...
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCcccccc
Confidence 999999999999999998754 69999999999999999999999999999999999999 44568999999999876
Q ss_pred cCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... .....+++.|+|||++. ..++.++|||||||++|||++ |..||...........+..+. ..+ ....
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~-~~~--~~~~ 274 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY-RLP--PPMD 274 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE-ECC--CCTT
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCC--CCcc
Confidence 54321 11224577899999886 568999999999999999998 999999888877777765542 222 2235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++..+.++|.+||+.||.+||++.++++
T Consensus 275 ~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 275 CPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp CBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 7899999999999999999999999875
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=354.07 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=211.5
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCC-----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGN-----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
+...+.|++++.||+|+||.||+|.+..++. .||+|++.... .....+.+.+|+.+++++.+||||+++++++
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3445679999999999999999999877665 79999885432 3345677899999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHc--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQ--------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~ 230 (544)
...+.+++||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC
Confidence 9999999999999999999998753 35799999999999999999999999999999999999954
Q ss_pred CCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHH
Q 009091 231 KDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305 (544)
Q Consensus 231 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~ 305 (544)
++.+||+|||++........ .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.......
T Consensus 200 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 276 (333)
T 2i1m_A 200 ---GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276 (333)
T ss_dssp ---GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred ---CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence 45799999999986543322 22345788999999875 568999999999999999998 99999887665555
Q ss_pred HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 306 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
..+.........+ ..+++.+.++|.+||+.||.+|||+.++++
T Consensus 277 ~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 277 YKLVKDGYQMAQP--AFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHHTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCC--CCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 5555544433322 356899999999999999999999999875
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=357.19 Aligned_cols=249 Identities=22% Similarity=0.293 Sum_probs=204.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCe----EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNS----YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.++|++.+.||+|+||+||+|.+..++.. ||+|.+.... .......+.+|+.+++++. ||||+++++++. .+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCC-CTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEc-CC
Confidence 35699999999999999999999888887 5555553221 2223345678999999997 999999999986 46
Q ss_pred eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..++||||+++|+|.+++... +.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---SSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---CCCeEEECCCCcccc
Confidence 688999999999999999774 5799999999999999999999999999999999999994 445799999999987
Q ss_pred ccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 248 IDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 248 ~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... ......||..|+|||++. +.++.++|||||||++|+|++ |..||.+.........+..+..... + ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~--~~ 241 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ-P--QI 241 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC-C--TT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC-C--Cc
Confidence 65432 223456888999999986 568999999999999999999 9999998877777776665532222 1 24
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
++..+.++|.+||..||.+|||+.+++++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 68889999999999999999999999876
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=344.92 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=214.1
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+...++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 83 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP 83 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC
Confidence 34456799999999999999999999999999999998532 334677899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
+++||||++|++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++..
T Consensus 84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCGGGT
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCcccee
Confidence 99999999999999999874 3489999999999999999999999999999999999994 445799999999987
Q ss_pred ccCCCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 248 IDEGKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 248 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
...... .....||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+..... . .....+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~ 237 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-M--ERPEGC 237 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC-C--CCCTTC
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC-C--CCCCCC
Confidence 654332 22345788999999886 568999999999999999999 9999988877777666655422 2 222367
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++.+.+||.+||..||.+|||+.++++
T Consensus 238 ~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 238 PEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 999999999999999999999999864
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=352.93 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=208.2
Q ss_pred ccccceecceecccCCeEEEEEEE-----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTE-----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..++|++++.||+|+||+||+|.+ ..+++.||+|++.... .......+.+|+.++.++.+||||+++++++..
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence 456799999999999999999985 3567899999985432 334456789999999999779999999999876
Q ss_pred CC-eEEEEEeccCCCChHHHHHHcCC----------------CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 167 RQ-SVHLVMELCSGGELFDKIIAQGH----------------YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 167 ~~-~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
.+ .+++||||+++++|.+++..... +++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence 54 58999999999999999987554 88999999999999999999999999999999999994
Q ss_pred cCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
.++.+||+|||++........ .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+......
T Consensus 183 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 259 (316)
T 2xir_A 183 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259 (316)
T ss_dssp ---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred ---CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence 445799999999987644322 22356789999999885 568999999999999999998 9999987664443
Q ss_pred H-HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 305 F-DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 305 ~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
. ..+..+ .....+ ..+++.+.++|.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~-~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 260 FCRRLKEG-TRMRAP--DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHHT-CCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhccC-ccCCCC--CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3 333333 222222 3578999999999999999999999999876
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=346.06 Aligned_cols=254 Identities=20% Similarity=0.284 Sum_probs=205.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+.+|++|..+..+....+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-----SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-----chhHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence 35577999999999999999999999999999999885432 2235789999999998555566666666778899
Q ss_pred EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++..+..+.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999999 8899999974 4579999999999999999999999999999999999999643445679999999998765
Q ss_pred CCCc--------eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHhCCccCCC
Q 009091 250 EGKV--------YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETE---KGIFDAILKGGVDFES 317 (544)
Q Consensus 250 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~---~~~~~~i~~~~~~~~~ 317 (544)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ...+..+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 4322 234679999999999864 689999999999999999999999986432 2333333332222221
Q ss_pred C-cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 318 E-PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 318 ~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+ ....+++.+.++|.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 1 11357899999999999999999999999864
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=343.60 Aligned_cols=249 Identities=25% Similarity=0.307 Sum_probs=207.9
Q ss_pred cccceecc-eecccCCeEEEEEEE--CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGK-ELGRGQFGITYLCTE--NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.++|.+.+ .||+|+||.||+|.+ ..++..||||++.... ......+.+.+|+.+++.+. ||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE-CCCC
Confidence 45689888 999999999999954 5667899999986542 23344678899999999997 99999999999 5677
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+++||||+++++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.+ +.+||+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECC
T ss_pred cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCC---CcEEEccCCcceeec
Confidence 89999999999999999998889999999999999999999999999999999999999653 479999999998765
Q ss_pred CCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..... ....|++.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+... . ....+
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~ 245 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM-G--CPAGC 245 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-C--CCTTC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-C--CCCCC
Confidence 43321 2235678899999886 458889999999999999999 99999988887777766654322 1 12357
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++.+.++|.+||+.||.+||++.++++
T Consensus 246 ~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 246 PREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999999999874
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=353.23 Aligned_cols=248 Identities=20% Similarity=0.250 Sum_probs=197.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ--- 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--- 168 (544)
-..+|++.+.||+|+||+||+|.+. ++.||||++... ........+|+.+++++. ||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 94 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMK-HENILQFIGAEKRGTSVD 94 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG----GHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSS
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC----chHHHHHHHHHHHHhcCC-CCCchhhcceeccCCCCC
Confidence 3467999999999999999999876 789999998532 233445567999999997 999999999998743
Q ss_pred -eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc----------CCEeecCCCCceeeecCCCCccE
Q 009091 169 -SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM----------GVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 169 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~----------~ivHrDikp~Nill~~~~~~~~v 237 (544)
.+++||||+++|+|.+++.. ..+++..++.++.|++.||.|||+. ||+||||||+|||+ +.++.+
T Consensus 95 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~ 170 (322)
T 3soc_A 95 VDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTA 170 (322)
T ss_dssp EEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCE
T ss_pred ceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeE
Confidence 47999999999999999876 4599999999999999999999999 99999999999999 445679
Q ss_pred EEeecCCcccccCCCc---eecccCCccccCcccccc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCh-------
Q 009091 238 KATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETE------- 301 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~~l~el~tg~~pf~~~~~------- 301 (544)
||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|||++|+.||.+...
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 9999999987654322 233579999999999864 456788999999999999999999975422
Q ss_pred ---------HHHHHHHHhCCccCCCCcc---cCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 302 ---------KGIFDAILKGGVDFESEPW---LLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 302 ---------~~~~~~i~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
......+.........+.. ...++++.+||.+||+.||.+|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 1222222222222111110 012345999999999999999999999874
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=355.65 Aligned_cols=256 Identities=22% Similarity=0.300 Sum_probs=205.9
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.....++|++.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.+++.+. ||||+++++++...+
T Consensus 34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 34 LEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE---SSQGIEEFETEIETLSFCR-HPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCC-CTTBCCEEEECCCTT
T ss_pred HHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCC
Confidence 3445677999999999999999999965 6899999987543 2345678899999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 169 SVHLVMELCSGGELFDKIIAQG----HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..++||||+++++|.+++.... .+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeeccc
Confidence 9999999999999999886543 48999999999999999999999999999999999999 4556899999999
Q ss_pred cccccCC---CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHH-------HHHHhCCc
Q 009091 245 SVFIDEG---KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF-------DAILKGGV 313 (544)
Q Consensus 245 a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~-------~~i~~~~~ 313 (544)
+...... .......||+.|+|||++. +.++.++|||||||++|+|++|+.||......... .....+..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 9865432 2223456899999999875 66899999999999999999999999765332111 11111111
Q ss_pred cC------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCC
Q 009091 314 DF------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352 (544)
Q Consensus 314 ~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 352 (544)
.. .......++..+.++|.+||+.||.+|||+.+++++-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 10 0111123456789999999999999999999998764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=352.75 Aligned_cols=255 Identities=29% Similarity=0.458 Sum_probs=191.7
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
+...+....+|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++.+||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~ 96 (337)
T 3ll6_A 20 GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96 (337)
T ss_dssp TCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence 444455566899999999999999999999999999999988543 34456678899999999977999999999984
Q ss_pred --------eCCeEEEEEeccCCCChHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCC
Q 009091 166 --------DRQSVHLVMELCSGGELFDKIIA---QGHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKD 232 (544)
Q Consensus 166 --------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~ 232 (544)
....+++||||+. |+|.+++.. .+.+++..++.++.||+.||.|||+.| |+||||||+|||++
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~--- 172 (337)
T 3ll6_A 97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS--- 172 (337)
T ss_dssp ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEEC---
T ss_pred ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEEC---
Confidence 3446899999996 699888865 456999999999999999999999999 99999999999994
Q ss_pred CCccEEEeecCCcccccCCCce-------------ecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCC
Q 009091 233 GGAMLKATDFGLSVFIDEGKVY-------------RDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPP 295 (544)
Q Consensus 233 ~~~~vkl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~p 295 (544)
.++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++|..|
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p 252 (337)
T 3ll6_A 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252 (337)
T ss_dssp TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 4457999999999876543211 1446999999999872 3578899999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 296 FWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 296 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
|......... ...... +.....+..+.+||.+||+.||.+|||+.++++|-+
T Consensus 253 ~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 253 FEDGAKLRIV----NGKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp C----------------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred CcchhHHHhh----cCcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 9765443322 222222 223356788999999999999999999999998754
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-43 Score=343.80 Aligned_cols=251 Identities=27% Similarity=0.380 Sum_probs=202.7
Q ss_pred ccccceecceecccCCeEEEEEE----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
..++|++.+.||+|+||.||+|. +..+++.||+|++.... .....+.+.+|+.+++.+. ||||+++++++...
T Consensus 19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~ 95 (302)
T 4e5w_A 19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTED 95 (302)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC-
T ss_pred hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCeeeeeeEEecC
Confidence 34669999999999999999999 56789999999986443 3345678899999999997 99999999999876
Q ss_pred --CeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 --QSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 --~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
..+++||||+++++|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~ 172 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGL 172 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTT
T ss_pred CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCC---CCEEECcccc
Confidence 678999999999999999955 4569999999999999999999999999999999999999553 4799999999
Q ss_pred cccccCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCC--------------ChHHHH
Q 009091 245 SVFIDEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAE--------------TEKGIF 305 (544)
Q Consensus 245 a~~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~--------------~~~~~~ 305 (544)
+........ .....||..|+|||++. ..++.++||||||+++|+|++|..|+... ......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987755432 23456888999999885 55888999999999999999999886322 111112
Q ss_pred HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 306 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
..........+ ....+++.+.+||.+||+.||.+|||+.++++
T Consensus 253 ~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 253 VNTLKEGKRLP--CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHHTTCCCC--CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHhccCCCC--CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 22222222222 22367999999999999999999999999875
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=367.71 Aligned_cols=248 Identities=21% Similarity=0.332 Sum_probs=212.7
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
....|++.+.||+|+||.||+|.+..++..||||++... ....+.+.+|+.+|+++. ||||+++++++...+.++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS----SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc----ccchHHHHHHHHHHHhcC-CCCEeeEEEEEecCCcEE
Confidence 356699999999999999999999988999999998543 234678999999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 172 LVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEEEeecccceecc
Confidence 999999999999999874 4589999999999999999999999999999999999994 44579999999998765
Q ss_pred CCCce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 250 EGKVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 250 ~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
..... ....++..|+|||++. +.++.++|||||||++|||++ |..||.+.........+..+ .... ....+++
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~ 446 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRME--RPEGCPE 446 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCC--CCTTCCH
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC--CCCCCCH
Confidence 43221 2335678899999886 568999999999999999999 99999888777776665543 2222 2236799
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+.+||.+||+.||.+|||+.+|++
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999999999975
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=350.57 Aligned_cols=250 Identities=22% Similarity=0.282 Sum_probs=202.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeecc--ccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRK--LVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.++|++.+.||+|+||.||+|.+..++..+++|+..+.. .........+.+|+.+++++. ||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC-c
Confidence 356999999999999999999999888876555443321 123445678999999999997 999999999998755 7
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++|+||+.+|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++....
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~---~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET---TEEEECCTTC-----
T ss_pred eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC---CCEEEccCcceeEcc
Confidence 8999999999999999874 569999999999999999999999999999999999999543 479999999998764
Q ss_pred CCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 250 EGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 250 ~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.... .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..+... +. ...++
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~ 245 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-PQ--PPICT 245 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-CC--CTTBC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-CC--CccCC
Confidence 3322 22345788999999886 568999999999999999999 99999988877777666554322 22 23578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.++.++|.+||..||.+|||+.++++
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999999999999876
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=344.79 Aligned_cols=248 Identities=25% Similarity=0.430 Sum_probs=209.8
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED---- 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 166 (544)
.+..+|++.+.||+|+||.||+|.+..+++.||+|++.... +.+.+|+.+++++. ||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 79 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD-HVNIVHYNGCWDGFDYD 79 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCC-CCCEEEEeeeEeccccC
Confidence 34567999999999999999999999999999999985432 34678999999997 9999999998854
Q ss_pred ------------CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC
Q 009091 167 ------------RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD 232 (544)
Q Consensus 167 ------------~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~ 232 (544)
...+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-- 157 (284)
T 2a19_B 80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD-- 157 (284)
T ss_dssp ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--
T ss_pred cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC--
Confidence 45589999999999999999764 57999999999999999999999999999999999999964
Q ss_pred CCccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC
Q 009091 233 GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311 (544)
Q Consensus 233 ~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~ 311 (544)
++.+||+|||++.............||+.|+|||++. ..++.++||||||+++|+|++|..||... ......+...
T Consensus 158 -~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~ 234 (284)
T 2a19_B 158 -TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG 234 (284)
T ss_dssp -TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT
T ss_pred -CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc
Confidence 3479999999998876655555668999999999886 45899999999999999999999987532 2233333332
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.. ...++..+.++|.+||+.||.+|||+.++++|.|....
T Consensus 235 ~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 235 II------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 21 12478999999999999999999999999999887654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=363.49 Aligned_cols=243 Identities=23% Similarity=0.338 Sum_probs=205.7
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-SV 170 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~ 170 (544)
..+.|++.+.||+|+||.||+|.+. +..||||++... ...+.+.+|+.+|++++ ||||+++++++.... .+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSC-----TTSHHHHHHHHHHHTCC-CTTBCCEEEEEECTTSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCc-----hHHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCCCce
Confidence 3467999999999999999999875 779999998542 24567899999999997 999999999987654 79
Q ss_pred EEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 171 HLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
+|||||+++|+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CCCCEEEeeCCCcccc
Confidence 999999999999999987654 79999999999999999999999999999999999994 4557999999999865
Q ss_pred cCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.... ....+++.|+|||++. ..++.++|||||||++|||++ |..||......+....+..+. ... ....+++.
T Consensus 340 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~--~p~~~~~~ 414 (450)
T 1k9a_A 340 SSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-KMD--APDGCPPA 414 (450)
T ss_dssp C--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC-CCC--CCTTCCHH
T ss_pred cccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCC--CCCcCCHH
Confidence 4322 2346788999999885 568999999999999999998 999999887777777766553 222 22368999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.+||.+||+.||.+|||+.++++
T Consensus 415 l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 415 VYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999864
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=340.57 Aligned_cols=250 Identities=24% Similarity=0.322 Sum_probs=206.0
Q ss_pred ccccceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
..++|++.+.||+|+||+||+|.+... +..||+|++.... .....+.+.+|+.+++++. ||||+++++++.. +
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~ 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEE-E 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHC-CTTBCCEEEEECS-S
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCC-CCCcceEEEEEcC-C
Confidence 346799999999999999999986543 3469999885432 3445678899999999997 9999999999865 4
Q ss_pred eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..++||||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||++..
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP---ECVKLGDFGLSRY 162 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEET---TEEEECCCCGGGC
T ss_pred CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCC---CcEEeCccCCCcc
Confidence 568999999999999999765 459999999999999999999999999999999999999653 4799999999987
Q ss_pred ccCCCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 248 IDEGKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 248 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
...... .....|++.|+|||++. ..++.++||||||+++|+|++ |+.||...........+..+.... ....+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 239 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---KPDLC 239 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---CCTTC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC---CCCCC
Confidence 654322 22346788999999886 568999999999999999998 999998877777776665543221 22357
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
++.+.++|.+||..||.+|||+.+++++
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 240 PPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 8999999999999999999999998764
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=344.58 Aligned_cols=253 Identities=23% Similarity=0.403 Sum_probs=196.6
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.+...++|++.+.||+|+||+||+|.+. ..+|+|++.... ......+.+.+|+.+++++. ||||+++++++ ...
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~ 92 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAP 92 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSS
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-CCHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCC
Confidence 3445567999999999999999999854 359999885443 23455678899999999997 99999999965 556
Q ss_pred eEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+|||++. ++.+||+|||++..
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~---~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE---DNTVKIGDFGLATE 169 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET---TTEEEECCCC----
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC---CCCEEEccceeccc
Confidence 68999999999999999864 356999999999999999999999999999999999999954 45799999999976
Q ss_pred ccC---CCceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHhCCccCCCC-
Q 009091 248 IDE---GKVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGI-FDAILKGGVDFESE- 318 (544)
Q Consensus 248 ~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~-~~~i~~~~~~~~~~- 318 (544)
... ........||+.|+|||++. ..++.++||||||+++|+|++|..||........ ...+..+.......
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh
Confidence 543 12233457999999999874 4578899999999999999999999988655544 44444443322221
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
....+++.+.+||.+||+.||.+|||+.++++
T Consensus 250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 22357899999999999999999999999875
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=382.95 Aligned_cols=260 Identities=26% Similarity=0.416 Sum_probs=211.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe------C
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED------R 167 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------~ 167 (544)
++|++.+.||+|+||.||+|.+..+|..||||++... ......+.+.+|+.+++++. ||||+++++++.. .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCceeeeecccccccCC
Confidence 4699999999999999999999999999999988543 23455678899999999997 9999999998765 6
Q ss_pred CeEEEEEeccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
+..++||||++|++|.+++.... .+++..++.++.|++.||.|||+.||+||||||+|||++.++....+||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 77899999999999999998754 589999999999999999999999999999999999998766666799999999
Q ss_pred cccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHH---------H-----HH
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD---------A-----IL 309 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~---------~-----i~ 309 (544)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||.......... . ..
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 99877666556678999999999886 568999999999999999999999997653321110 0 00
Q ss_pred hCCccC------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 310 KGGVDF------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 310 ~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.+...+ +......+++.+.+||.+||.+||.+|||+.++++||||++
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 111111 11112235688999999999999999999999999999975
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-43 Score=348.75 Aligned_cols=251 Identities=22% Similarity=0.368 Sum_probs=204.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCC----CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTG----NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
...+|++.+.||+|+||.||+|.+..++ ..||+|++.... .......+.+|+.+++++. ||||+++++++...
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 118 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKY 118 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSS
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecC
Confidence 3456999999999999999999987554 359999885432 3344567889999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
+.++|||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSR 195 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC--
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CCCcEEECCCCcch
Confidence 9999999999999999999775 5699999999999999999999999999999999999994 45679999999998
Q ss_pred cccCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 247 FIDEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 247 ~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
....... .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+.. .+ ..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~-~~--~~ 272 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-LP--TP 272 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CC--CC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc-CC--Cc
Confidence 7654321 12235678999999886 568999999999999999999 9999998888777777765522 22 22
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..+++.+.++|.+||+.||.+||++.+++++
T Consensus 273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3578999999999999999999999998754
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-43 Score=337.73 Aligned_cols=246 Identities=24% Similarity=0.395 Sum_probs=210.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA----MSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTT----BCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCeEEE
Confidence 56999999999999999999987 57789999985432 23467899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGGGGBCCHH
T ss_pred EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEccccccccccccc
Confidence 9999999999999875 5689999999999999999999999999999999999994 44579999999998664321
Q ss_pred --ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 253 --VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 253 --~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
......|++.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+.... ....+++.+.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~ 235 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVY 235 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTSCHHHH
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC---CCccCcHHHH
Confidence 112346788999999986 568999999999999999999 899999888877777776653322 1235789999
Q ss_pred HHHHHhcccCcCCCCChhhhhCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~h 351 (544)
++|.+||+.||.+|||+.+++++
T Consensus 236 ~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 236 QIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999999999764
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=341.25 Aligned_cols=251 Identities=26% Similarity=0.321 Sum_probs=209.8
Q ss_pred cccceecc-eecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGK-ELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.++|.+.. .||+|+||.||+|.+. .++..||+|++... ......+.+.+|+.+++++. ||||+++++++ ..+.
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~-~~~~ 83 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLD-NPYIVRLIGVC-QAEA 83 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEE-ESSS
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCC-CCCEeEEEEEe-cCCC
Confidence 45576666 9999999999999864 46778999998643 23455678899999999997 99999999999 4567
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++.+ +.+||+|||++...
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKAL 160 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEEC
T ss_pred cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC---CCEEECcccceeee
Confidence 89999999999999998654 459999999999999999999999999999999999999643 47999999999876
Q ss_pred cCCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
...... ....||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+.... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~ 237 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPE 237 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCTT
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC---CCCC
Confidence 543221 2235688999999886 568999999999999999998 999999888777777766653221 1236
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCc
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 353 (544)
+++.+.++|.+||+.||.+||++.+++++.+
T Consensus 238 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 238 CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 7999999999999999999999999987754
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=343.84 Aligned_cols=254 Identities=20% Similarity=0.278 Sum_probs=201.1
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+|+.+++.+.+|++|..+..++...+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 34567999999999999999999999999999999864432 1234778999999998556666666666788899
Q ss_pred EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999999 8999999985 4579999999999999999999999999999999999999544445679999999998765
Q ss_pred CCCc--------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH---HHHHHHHhCCccCCC
Q 009091 250 EGKV--------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK---GIFDAILKGGVDFES 317 (544)
Q Consensus 250 ~~~~--------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---~~~~~i~~~~~~~~~ 317 (544)
.... .....||+.|+|||++. ..++.++|||||||++|+|++|..||.+.... ..+..+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 4322 23467999999999886 46899999999999999999999999764332 233333322222221
Q ss_pred C-cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 318 E-PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 318 ~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+ ....+++.+.+||.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 1 11356899999999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=339.27 Aligned_cols=245 Identities=16% Similarity=0.218 Sum_probs=207.7
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR--QSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~ 170 (544)
.++|++.+.||+|+||.||+|.+. +..||+|++.... ......+.+.+|+.++++++ ||||+++++++... +.+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 84 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHP 84 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSSC
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcC-CCchhheEEEEccCCCCCe
Confidence 356999999999999999999985 8889999986543 23445677899999999997 99999999999876 788
Q ss_pred EEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 171 HLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
++||||+++++|.+++.... .+++..++.++.|++.||.|||++| |+||||||+|||++ .++.++|+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMADVKF 161 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---TTSCEEEEGGGSCC
T ss_pred EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---CCcceeEEecccee
Confidence 99999999999999998765 4899999999999999999999999 99999999999994 44568888888765
Q ss_pred cccCCCceecccCCccccCccccccc-C---CCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLRRS-Y---GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~---~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
.... ....||+.|+|||++.+. + +.++|||||||++|+|++|..||...........+.........+ ..
T Consensus 162 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 235 (271)
T 3kmu_A 162 SFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP--PG 235 (271)
T ss_dssp TTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCC--TT
T ss_pred eecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCC--CC
Confidence 4333 235789999999998642 3 337999999999999999999999888877777766655443332 36
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+++.+.++|.+||+.||.+|||++++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 236 ISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 7999999999999999999999999875
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=356.85 Aligned_cols=249 Identities=20% Similarity=0.266 Sum_probs=197.8
Q ss_pred ccccccceecceecccCCeEEEEE-----EECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccC--CCCeeEEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG--QQNIVEFRG 162 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~-----~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~iv~~~~ 162 (544)
....++|.+.+.||+|+||+||+| .+..+++.||+|++.. .....+.+|+.+++++.. |+||+.+++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP------ANPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS------CCHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC------CChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 344567999999999999999999 4677899999998843 234567788888888753 799999999
Q ss_pred EEEeCCeEEEEEeccCCCChHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec-------
Q 009091 163 AYEDRQSVHLVMELCSGGELFDKIIA-----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN------- 230 (544)
Q Consensus 163 ~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~------- 230 (544)
++...+..+|||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999999974 456999999999999999999999999999999999999965
Q ss_pred -CCCCccEEEeecCCccccc---CCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHH
Q 009091 231 -KDGGAMLKATDFGLSVFID---EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305 (544)
Q Consensus 231 -~~~~~~vkl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~ 305 (544)
.+..+.+||+|||+|+... ........+||+.|+|||++.+ .++.++|||||||++|||++|+.||........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~- 293 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC- 293 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-
Confidence 1225689999999997543 3334456789999999999864 589999999999999999999999965432110
Q ss_pred HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCC
Q 009091 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352 (544)
Q Consensus 306 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 352 (544)
.....+. ....++.+.+++..||+.+|.+|++..+.|.+.
T Consensus 294 ----~~~~~~~---~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 294 ----KPEGLFR---RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp ----EECSCCT---TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred ----eechhcc---ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 0000111 112467889999999999999997766655543
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=361.88 Aligned_cols=248 Identities=22% Similarity=0.345 Sum_probs=210.2
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+...+.|++.+.||+|+||+||+|.+. ++..||||++... ....+.+.+|+.+|+++. ||||+++++++. .+.
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~-~~~ 256 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQ-HDKLVKLHAVVT-KEP 256 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTT----SBCHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSS
T ss_pred eechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCC----CccHHHHHHHHHHHhhCC-CCCEeeEEEEEe-CCc
Confidence 344567999999999999999999986 4678999998543 234678999999999997 999999999986 567
Q ss_pred EEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
++|||||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARV 333 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTCCEEECSTTGGGG
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CCCcEEEeeCCCceE
Confidence 89999999999999999754 3689999999999999999999999999999999999994 456799999999987
Q ss_pred ccCCCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 248 IDEGKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 248 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
...... .....++..|+|||++. +.++.++|||||||++|||++ |..||.+....+....+..+. ..+. ...+
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~--~~~~ 410 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-RMPR--PENC 410 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CCCC--CTTS
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCC--CCCC
Confidence 654221 12335678899999986 668999999999999999999 999999888888777776653 2222 2367
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++++.+||.+||+.||.+|||+++|++
T Consensus 411 ~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 411 PEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 999999999999999999999999865
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=356.72 Aligned_cols=254 Identities=17% Similarity=0.161 Sum_probs=195.6
Q ss_pred cccceecceecccCCeEEEEEEECC---CCCeEEEEEEeeccccCh--------hcHHHHHHHHHHHHhccCCCCeeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS---TGNSYACKSILKRKLVNK--------QDREDIKREIQIMQHLSGQQNIVEFR 161 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~--------~~~~~~~~E~~~l~~l~~h~~iv~~~ 161 (544)
.++|++++.||+|+||.||+|.+.. ++..+|+|++........ .....+.+|+..++.+. ||||++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~~~ 114 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPLFY 114 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCCEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCcceee
Confidence 4679999999999999999999987 788999998865421100 11234567888888887 99999999
Q ss_pred EEEEe----CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 162 GAYED----RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 162 ~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
+++.. ...+++||||+ +++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++ ...+
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~~~ 192 (345)
T 2v62_A 115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN-PDQV 192 (345)
T ss_dssp EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS-TTSE
T ss_pred cccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC-CCcE
Confidence 99987 78899999999 999999998877899999999999999999999999999999999999996543 2379
Q ss_pred EEeecCCcccccCCC--------ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHH
Q 009091 238 KATDFGLSVFIDEGK--------VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDA 307 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~ 307 (544)
||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 999999998764321 1134579999999999865 5899999999999999999999999653221 11111
Q ss_pred HHhCCccCCCCc-------ccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 308 ILKGGVDFESEP-------WLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 308 i~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.... .....+. ...+++++.++|.+||..||.+|||++++++
T Consensus 273 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 273 AKTN-LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHH-HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHh-hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1111 0001111 1157899999999999999999999999864
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=344.03 Aligned_cols=247 Identities=22% Similarity=0.341 Sum_probs=194.4
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHh--ccCCCCeeEEEEEEEe--
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH--LSGQQNIVEFRGAYED-- 166 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~~iv~~~~~~~~-- 166 (544)
.+.++|++.+.||+|+||+||+|.+ ++..||||++.. .....+.+|.+++.. +. ||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~------~~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSS------RDEKSWFRETELYNTVMLR-HENILGFIASDMTSR 75 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECG------GGHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecc------ccchhhHHHHHHHHHhhcc-CcCeeeEEEeecccc
Confidence 3567799999999999999999987 588999998843 234556677777776 55 9999999998654
Q ss_pred --CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCEeecCCCCceeeecCCCCcc
Q 009091 167 --RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH--------FMGVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 167 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH--------~~~ivHrDikp~Nill~~~~~~~~ 236 (544)
...+++||||+++|+|.+++. ...+++..++.++.|++.||.||| +.||+||||||+|||++ .++.
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~~~~ 151 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQ 151 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---TTSC
T ss_pred CCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---CCCC
Confidence 356899999999999999984 457999999999999999999999 99999999999999994 4557
Q ss_pred EEEeecCCcccccCCCce-----ecccCCccccCccccccc-------CCCcchHHHHHHHHHHHhhC----------CC
Q 009091 237 LKATDFGLSVFIDEGKVY-----RDIVGSAYYVAPEVLRRS-------YGKEIDVWSAGVILYILLSG----------VP 294 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~~l~el~tg----------~~ 294 (544)
+||+|||++......... ....||+.|+|||++.+. ++.++|||||||++|||++| ..
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999876543322 234799999999998643 44689999999999999999 88
Q ss_pred CCCCCCh----HHHHHHHHh-CCccCCCCc---ccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 295 PFWAETE----KGIFDAILK-GGVDFESEP---WLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 295 pf~~~~~----~~~~~~i~~-~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
||..... ......... .......+. ...+++.+.+||.+||+.||.+|||+.++++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 8865322 122222222 222111111 0124568999999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=342.94 Aligned_cols=251 Identities=23% Similarity=0.368 Sum_probs=202.2
Q ss_pred cccceecceecccCCeEEEEEEECC-CCC--eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS-TGN--SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~--~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.++|++.+.||+|+||+||+|.+.. ++. .||+|++...........+.+.+|+.+++++. ||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-
Confidence 4569999999999999999998643 333 68999886554444456678999999999997 999999999998755
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+ +.+||+|||++...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCC---CCEEEccccccccc
Confidence 78999999999999999764 569999999999999999999999999999999999999543 47999999999876
Q ss_pred cCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... .....+|..|+|||++. ..++.++||||||+++|+|++ |..||...........+.......+.+ ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 249 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP--ED 249 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCC--TT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCC--cC
Confidence 54332 12346788999999886 457899999999999999999 999999988888888777665444332 36
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+++.+.++|.+||..||.+|||+.++++
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 7999999999999999999999999986
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-43 Score=345.44 Aligned_cols=252 Identities=22% Similarity=0.298 Sum_probs=201.1
Q ss_pred ccccceecceecccCCeEEEEEEECC---CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENS---TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
..++|.+++.||+|+||.||+|.+.. ++..||+|++.... ......+.+.+|+.+++++. ||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeecc
Confidence 35679999999999999999998765 45589999885433 23445677899999999997 999999999987654
Q ss_pred -----eEEEEEeccCCCChHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccE
Q 009091 169 -----SVHLVMELCSGGELFDKIIA------QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 169 -----~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~v 237 (544)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---TTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcE
Confidence 45999999999999999853 34699999999999999999999999999999999999994 44579
Q ss_pred EEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCC
Q 009091 238 KATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~ 312 (544)
||+|||++....... ......+++.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+.
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 266 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC
Confidence 999999998765432 122346788999999886 458999999999999999999 899998888877777776653
Q ss_pred ccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.. .....+++.+.++|.+||..||.+|||+.+++++
T Consensus 267 ~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 267 RL---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp CC---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CC---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22 2223578999999999999999999999999764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=348.20 Aligned_cols=249 Identities=26% Similarity=0.385 Sum_probs=204.3
Q ss_pred cccceecceecccCCeEEEEEE----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE--e
Q 009091 93 RQFYTLGKELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE--D 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--~ 166 (544)
.++|++.+.||+|+||.||+|. +..++..||+|++... .....+.+.+|+.+++++. ||||+++++++. .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALH-SDFIVKYRGVSYGPG 97 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCC
Confidence 3579999999999999999999 5678899999998543 3445577899999999996 999999999886 4
Q ss_pred CCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
.+.+++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES---EAHVKIADFGLA 174 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCGGGC
T ss_pred CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC---CCCEEEcccccc
Confidence 5679999999999999999987 456999999999999999999999999999999999999954 347999999999
Q ss_pred ccccCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH--------------HHHH
Q 009091 246 VFIDEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFD 306 (544)
Q Consensus 246 ~~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~--------------~~~~ 306 (544)
........ .....||+.|+|||++. ..++.++|||||||++|+|++|..||...... ....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 87654332 12346888899999886 45789999999999999999999998654322 1111
Q ss_pred HHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 307 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.........+. ...+++.+.+||.+||+.||.+|||+.++++
T Consensus 255 ~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 255 ELLEEGQRLPA--PPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhhcccCCCC--CCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22222222222 2367999999999999999999999999954
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=347.71 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=202.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE----eC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE----DR 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~----~~ 167 (544)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.+. ||||+++++++. ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFN-HPNILRLVAYCLRERGAK 102 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCC
Confidence 356799999999999999999999999999999988543 3455678899999999997 999999999986 24
Q ss_pred CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 168 QSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
...++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~dfg 179 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQPVLMDLG 179 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---CCCCEEEEecC
Confidence 578999999999999999876 46699999999999999999999999999999999999994 44579999999
Q ss_pred CcccccCCCc----------eecccCCccccCcccccc----cCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHH
Q 009091 244 LSVFIDEGKV----------YRDIVGSAYYVAPEVLRR----SYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAI 308 (544)
Q Consensus 244 ~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i 308 (544)
++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...... ......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 259 (317)
T 2buj_A 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259 (317)
T ss_dssp SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH
T ss_pred cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH
Confidence 9876532110 123467999999999853 3689999999999999999999999542111 111122
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 352 (544)
....... +....+++.+.++|.+||+.||.+|||+.+++++-
T Consensus 260 ~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 260 VQNQLSI--PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp HHCC--C--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hhccCCC--CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 2222222 22346799999999999999999999999999863
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=335.39 Aligned_cols=248 Identities=22% Similarity=0.309 Sum_probs=208.7
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+...++|++.+.||+|+||.||+|.+. ++..||+|++... ....+.+.+|+.+++++. ||||+++++++.. +.
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~ 81 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG----SMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EP 81 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTT----SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SS
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCC----cccHHHHHHHHHHHHhCC-CcCcceEEEEEcC-CC
Confidence 334567999999999999999999976 5678999988543 234577899999999997 9999999999864 56
Q ss_pred EEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 170 VHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.++||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARL 158 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEE
T ss_pred cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEEECCCccccc
Confidence 889999999999999986543 699999999999999999999999999999999999994 456799999999987
Q ss_pred ccCCCce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 248 IDEGKVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 248 ~~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
....... ....+++.|+|||++. +.++.++||||||+++|+|++ |..||.+.........+..+... .....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNC 235 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTC
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCcccc
Confidence 6543322 2345778999999986 568899999999999999999 99999988887777776655322 122367
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
++.+.++|.+||+.||.+|||+.++++
T Consensus 236 ~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 236 PEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 899999999999999999999999875
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=360.33 Aligned_cols=253 Identities=22% Similarity=0.262 Sum_probs=207.6
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++++.||+|+||.||+|.+..++..||||++.... ....+.+|+.+++.|.++++|+.+..++...+..+
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-----SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 4567999999999999999999999999999999875432 12347789999999997788888888888899999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||+ +++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||||+..+..+.+||+|||+++....
T Consensus 80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999999 8999999986 56799999999999999999999999999999999999996444556899999999987654
Q ss_pred CCc--------eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHhCCccCCCC
Q 009091 251 GKV--------YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE---KGIFDAILKGGVDFESE 318 (544)
Q Consensus 251 ~~~--------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~---~~~~~~i~~~~~~~~~~ 318 (544)
... .....||+.|+|||++. ..++.++|||||||+||||++|..||.+... ...+..+..........
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE 238 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence 322 12568999999999886 4689999999999999999999999987543 23333333222111111
Q ss_pred -cccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 319 -PWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 319 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
....+++++.+||..||+.||.+||++.+|++
T Consensus 239 ~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 11357899999999999999999999998753
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=342.84 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=202.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccc-cChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL-VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
.|..++.||+|+||.||+|.+ ++..||+|++..... ......+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCceEEE
Confidence 356679999999999999986 588999999865332 22344678899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 174 MELCSGGELFDKIIA---QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||+++++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++.....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~ 185 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEK 185 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccc
Confidence 999999999999874 3458999999999999999999999999999999999999 4456799999999987654
Q ss_pred CCc---eecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHH----HHHHHHhCCcc-------CC
Q 009091 251 GKV---YRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVD-------FE 316 (544)
Q Consensus 251 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~----~~~~i~~~~~~-------~~ 316 (544)
... .....||+.|+|||++.+.++.++||||||+++|+|++|..||....... +...+...... ..
T Consensus 186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 2nru_A 186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265 (307)
T ss_dssp CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence 221 23457999999999998889999999999999999999999997654332 22222211110 00
Q ss_pred CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 317 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.......+..+.++|.+||+.||.+|||+.+++++
T Consensus 266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 11112345678999999999999999999998853
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=347.73 Aligned_cols=260 Identities=20% Similarity=0.229 Sum_probs=204.3
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
......++|++.+.||+|+||.||+|.+. ++..||||++..... ......+.+|+.+++.+. ||||+++++++...
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 24 ELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERT--QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTP 99 (326)
T ss_dssp HHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-------CCCHHHHHHHGGGTCC-CTTBCCCCEEECCS
T ss_pred HHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccC--chHHHHHHHHHHHHHhcc-CCCccceEEEEecC
Confidence 34455678999999999999999999854 689999999865432 122236889999999997 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CCEeecCCCCceeeecCCCCccEEEe
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG----HYTEKAAAALCRAIVNVVHHCHFM---GVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
+..++||||+++++|.+++.... .+++..+..++.|++.||.|||+. ||+||||||+|||++ .++.+||+
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~---~~~~~kl~ 176 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVVG 176 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC---TTCCEEEC
T ss_pred CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC---CCCCEEec
Confidence 99999999999999999998643 389999999999999999999999 999999999999994 45579999
Q ss_pred ecCCcccccCC--CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCC----ChHHHHHHHHhCCc
Q 009091 241 DFGLSVFIDEG--KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGIFDAILKGGV 313 (544)
Q Consensus 241 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~----~~~~~~~~i~~~~~ 313 (544)
|||++...... .......||+.|+|||++. ..++.++|||||||++|+|++|..||... ..............
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999876532 2233456999999999885 56899999999999999999999999521 11111111111111
Q ss_pred cCC-----------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 314 DFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 314 ~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
... .......+..+.++|.+||+.||.+|||+.++++|-.-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 000 00111224679999999999999999999999987653
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=338.09 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=201.7
Q ss_pred cceecceecccCCeEEEEEEECCCCC---eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE-
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV- 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~- 170 (544)
.|.+++.||+|+||+||+|.+..++. .+|+|++.. .......+.+.+|+.+++++. ||||+++++++...+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~--~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT--CCSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc--cccHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEecCCCCc
Confidence 47778999999999999999765554 799998843 234455678899999999997 99999999999766554
Q ss_pred EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+.+++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++....
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEeCcCCCccccc
Confidence 999999999999999977 45689999999999999999999999999999999999994 45579999999998654
Q ss_pred CCC-----ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCC-CCCChHHHHHHHHhCCccCCCCcccC
Q 009091 250 EGK-----VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPF-WAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 250 ~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
... ......||+.|+|||++.+ .++.++||||||+++|+|++|..|| ...........+..+.. .+ ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~ 252 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR-LP--QPEY 252 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC-CC--CCTT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC-CC--CCcc
Confidence 321 2234578899999999864 6899999999999999999965554 44455555555544432 22 2235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+++.+.++|.+||+.||.+|||+.++++
T Consensus 253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 253 CPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7899999999999999999999999875
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=338.94 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=202.0
Q ss_pred ccceecceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-DRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~ 169 (544)
.+|++.+.||+|+||+||+|.+..++ ..+|+|.+.. .......+.+.+|+.+++++. ||||+++++++. ..+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~--~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT--CCSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc--CCCHHHHHHHHHHHHHHHhCC-CCCEeeeeeEEEcCCCc
Confidence 45999999999999999999975433 3588888743 223455678899999999997 999999999864 5668
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.++||||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECcccccccc
Confidence 89999999999999999763 458999999999999999999999999999999999999 44567999999999866
Q ss_pred cCCC-----ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 249 DEGK-----VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 249 ~~~~-----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
.... ......||+.|+|||++. ..++.++||||||+++|+|++ |.+||...........+..+...... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 255 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP---E 255 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC---T
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC---c
Confidence 4432 123356788999999886 568999999999999999999 56667666666666666655433222 3
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+++.+.++|.+||+.||.+|||+.++++
T Consensus 256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 256 YCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 57899999999999999999999999875
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=357.50 Aligned_cols=254 Identities=22% Similarity=0.333 Sum_probs=208.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
...+.|++.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|++++ ||||+++++++.. +.+
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~~ 253 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPI 253 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-Cce
Confidence 345679999999999999999999875 4679999885432 23567899999999997 9999999999876 678
Q ss_pred EEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 171 HLVMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
+|||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLI 330 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC--
T ss_pred EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCEEECCCccceec
Confidence 999999999999999964 35699999999999999999999999999999999999994 4457999999999876
Q ss_pred cCCCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 249 DEGKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 249 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
..... .....++..|+|||++. +.++.++|||||||++|||++ |..||.+....+....+..+. ..+. ...++
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~--~~~~~ 407 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPC--PPECP 407 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-CCCC--CTTSC
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCC--CCCCC
Confidence 54321 12345778999999875 568999999999999999999 999999888888777776553 2222 23679
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhC--CCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLE--HPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~--hp~f~~~ 357 (544)
+.+.+||.+||+.||.+|||++++++ ..++...
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 99999999999999999999999976 4566543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=343.76 Aligned_cols=248 Identities=27% Similarity=0.377 Sum_probs=200.4
Q ss_pred ccceecceecccCCeEEEEEEE----CCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 009091 94 QFYTLGKELGRGQFGITYLCTE----NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--R 167 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~ 167 (544)
++|++++.||+|+||+||++.. ..+++.||||++... ......+.+.+|+.+++++. ||||+++++++.. .
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 107 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGA 107 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTT
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCC-CcchhhEEEEEecCCC
Confidence 3349999999999999988754 457889999998643 23455678899999999998 9999999999987 4
Q ss_pred CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 168 QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..+++||||+++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKA 183 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCEE
T ss_pred ceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc---CCCCEEECCcccccc
Confidence 6899999999999999988654 599999999999999999999999999999999999994 456799999999987
Q ss_pred ccCCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH--------------HHHHHH
Q 009091 248 IDEGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAI 308 (544)
Q Consensus 248 ~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~--------------~~~~~i 308 (544)
...... .....||+.|+|||++. ..++.++|||||||++|+|++|..||...... ......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 765432 23356888999999886 46889999999999999999999999654221 011122
Q ss_pred HhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 309 LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.......+ ....+++.+.+||.+||+.||.+|||+.++++
T Consensus 264 ~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 264 LERGERLP--RPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcccCCC--CCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 22222222 22367999999999999999999999999873
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=336.00 Aligned_cols=242 Identities=23% Similarity=0.326 Sum_probs=198.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-CeEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR-QSVH 171 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~ 171 (544)
.++|++.+.||+|+||.||+|.+. +..||+|++... ...+.+.+|+.+++++. ||||+++++++... +.++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-----hHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCCceE
Confidence 466999999999999999999875 889999988532 24567899999999997 99999999987544 5789
Q ss_pred EEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 172 LVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+||||+++++|.+++...+. +++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC-----
T ss_pred EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEEEeecccccccc
Confidence 99999999999999977543 89999999999999999999999999999999999994 44579999999998654
Q ss_pred CCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
... ....+++.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+.. ......+++.+
T Consensus 169 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 243 (278)
T 1byg_A 169 STQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAV 243 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCCHHH
T ss_pred ccc--cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCcccCCHHH
Confidence 432 2346788999999986 568999999999999999998 9999988877777766655422 12223679999
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.++|.+||+.||.+|||+.++++
T Consensus 244 ~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 244 YEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCChhhCCCHHHHHH
Confidence 99999999999999999999875
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=352.59 Aligned_cols=248 Identities=23% Similarity=0.294 Sum_probs=195.7
Q ss_pred cceecceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE-DRQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~ 170 (544)
.|.+.+.||+|+||+||+|.+..++ ..||+|.+... ......+.+.+|+.+++++. ||||+++++++. ..+..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCC-CTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCCCe
Confidence 4888999999999999999976433 35889987532 23455678999999999997 999999999875 45678
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeecccccccc
Confidence 9999999999999999765 458899999999999999999999999999999999999 445679999999998664
Q ss_pred CCCc-----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 250 EGKV-----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 250 ~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
.... .....||+.|+|||++. ..++.++|||||||++|||++ |..||...........+..+..... ...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~~ 320 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEY 320 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CTT
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CCC
Confidence 3221 12346788999999886 568999999999999999999 6778877666666666655543222 235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++.+.++|.+||+.||.+|||+.+++++
T Consensus 321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 321 CPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 78999999999999999999999998753
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=349.76 Aligned_cols=247 Identities=15% Similarity=0.184 Sum_probs=198.4
Q ss_pred cccceecceecccCCeEEEEEEECCC--------CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeE-----
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST--------GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE----- 159 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~----- 159 (544)
.++|++.+.||+|+||.||+|.+..+ +..||+|++... +.+.+|+.+++++. ||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~-h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAA-KPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHC-CHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhc-ccchhhhhhhh
Confidence 35699999999999999999999874 889999988532 35778999999997 888876
Q ss_pred ----------EEEEEEe-CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCce
Q 009091 160 ----------FRGAYED-RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENF 226 (544)
Q Consensus 160 ----------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Ni 226 (544)
+++++.. .+.++|||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 6777765 78899999999 99999999876 7799999999999999999999999999999999999
Q ss_pred eeecCCCCccEEEeecCCcccccCCC--------ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCC
Q 009091 227 LLSNKDGGAMLKATDFGLSVFIDEGK--------VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFW 297 (544)
Q Consensus 227 ll~~~~~~~~vkl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~ 297 (544)
|++.++ ...+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.
T Consensus 191 l~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 191 FVDPED-QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEETTE-EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEcCCC-CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 995421 1279999999997654321 1133589999999998864 68999999999999999999999998
Q ss_pred CCC--hHHHHHHH---HhCCccCC--CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 298 AET--EKGIFDAI---LKGGVDFE--SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 298 ~~~--~~~~~~~i---~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
... ........ ......+. ...+..+++.+.+||.+||+.||.+|||++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 764 22222221 12211111 1123357899999999999999999999999864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=336.38 Aligned_cols=240 Identities=28% Similarity=0.435 Sum_probs=192.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|.+. +..||+|++.. ....+.+.+|+.+++++. ||||+++++++. +..++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~--~~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES-----ESERKAFIVELRQLSRVN-HPNIVKLYGACL--NPVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS-----TTHHHHHHHHHHHHHHCC-CTTBCCEEEBCT--TTTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC-----hhHHHHHHHHHHHHhcCC-CCCcCeEEEEEc--CCcEEE
Confidence 46999999999999999999875 78899998742 344677899999999997 999999999876 347899
Q ss_pred EeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH---cCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 174 MELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVVHHCHF---MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~~l~~lH~---~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
|||+++++|.+++..... ++...+..++.|++.||.|||+ +||+||||||+|||++.++ ..+||+|||++..
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~--~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG--TVLKICDFGTACD 155 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT--TEEEECCCCC---
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC--CEEEEcccccccc
Confidence 999999999999987553 7889999999999999999999 8999999999999996433 2489999999976
Q ss_pred ccCCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChH--HHHHHHHhCCccCCCCcccCCC
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEK--GIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.... .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... .....+..+.. .+....++
T Consensus 156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 230 (307)
T 2eva_A 156 IQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKNLP 230 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTTCC
T ss_pred cccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCcccccC
Confidence 5432 234579999999998864 6899999999999999999999999764332 23333333321 22234679
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+.+.++|.+||+.||.+|||++++++
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999999999986
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=348.35 Aligned_cols=251 Identities=17% Similarity=0.206 Sum_probs=199.5
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeecccc-----ChhcHHHHHHHHHHHHhcc--------CCCCeeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLV-----NKQDREDIKREIQIMQHLS--------GQQNIVE 159 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~--------~h~~iv~ 159 (544)
.++|++++.||+|+||+||+|++ +++.||||++...... .....+.+.+|+.+++.+. .||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 35699999999999999999997 6899999999765421 2334578899999999986 5999999
Q ss_pred EEEEEE------------------------------eCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 009091 160 FRGAYE------------------------------DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209 (544)
Q Consensus 160 ~~~~~~------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~ 209 (544)
+.+++. ..+.+||||||+++|++.+.+.. +.+++..++.++.||+.||.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence 888753 26789999999999987776644 57899999999999999999
Q ss_pred HHH-HcCCEeecCCCCceeeecCC-----------------CCccEEEeecCCcccccCCCceecccCCccccCcccccc
Q 009091 210 HCH-FMGVMHRDLKPENFLLSNKD-----------------GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR 271 (544)
Q Consensus 210 ~lH-~~~ivHrDikp~Nill~~~~-----------------~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 271 (544)
||| ++||+||||||+|||++.++ ....+||+|||+|+..... ..+||+.|+|||++.+
T Consensus 176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence 999 99999999999999997653 1237999999999877543 3489999999999987
Q ss_pred cCCCcchHHHHHHH-HHHHhhCCCCCCCCCh-HHHHHHHHhCC-cc--CCCCcccCCCHHHHHHHHHhcccCcCCCCChh
Q 009091 272 SYGKEIDVWSAGVI-LYILLSGVPPFWAETE-KGIFDAILKGG-VD--FESEPWLLISDSAKDLVRKMLIQDPKKRITSA 346 (544)
Q Consensus 272 ~~~~~~DiwslG~~-l~el~tg~~pf~~~~~-~~~~~~i~~~~-~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 346 (544)
..+.++||||||++ .+++++|..||..... ......+.... .. ...+.+..+++++++||.+||+.| |++
T Consensus 252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~ 326 (336)
T 2vuw_A 252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT 326 (336)
T ss_dssp CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence 77889999998777 7789999999843211 11223333221 11 111112356889999999999977 999
Q ss_pred hhh-CCCccc
Q 009091 347 EVL-EHPWMR 355 (544)
Q Consensus 347 ell-~hp~f~ 355 (544)
|+| +||||+
T Consensus 327 e~l~~Hp~f~ 336 (336)
T 2vuw_A 327 DLLCQHSLFK 336 (336)
T ss_dssp HHHHHCGGGC
T ss_pred HHHhcCCCcC
Confidence 999 999995
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=339.14 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=193.3
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc-CCCCeeEEEEEEEeC-
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS-GQQNIVEFRGAYEDR- 167 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~~~~~~~- 167 (544)
..+.++|++.+.||+|+||.||+|.+. +..||||++... ......+|.+++..+. +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 345677999999999999999999875 889999988432 2344555666665541 499999999999877
Q ss_pred ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCEeecCCCCceeeecCCCCcc
Q 009091 168 ---QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM--------GVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 168 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------~ivHrDikp~Nill~~~~~~~~ 236 (544)
..+++||||+++|+|.+++... .+++..++.++.|++.||.|||+. ||+||||||+|||++ .++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~---~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK---KNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC---TTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC---CCCC
Confidence 7899999999999999999654 699999999999999999999998 999999999999994 4557
Q ss_pred EEEeecCCcccccCCCce-----ecccCCccccCccccccc-CCCc------chHHHHHHHHHHHhhC----------CC
Q 009091 237 LKATDFGLSVFIDEGKVY-----RDIVGSAYYVAPEVLRRS-YGKE------IDVWSAGVILYILLSG----------VP 294 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~------~DiwslG~~l~el~tg----------~~ 294 (544)
+||+|||++......... ....||+.|+|||++.+. +... +|||||||++|||++| ..
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999766443221 245799999999998643 3343 8999999999999999 77
Q ss_pred CCCCCCh-----HHHHHHHHhCCccCCCCc---ccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 295 PFWAETE-----KGIFDAILKGGVDFESEP---WLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 295 pf~~~~~-----~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
||..... ......+.........+. ...+++++.+||.+||+.||.+|||+.++++|
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 7754321 222222222222222111 11346679999999999999999999999865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=361.78 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=210.6
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|+++. ||||+++++++.. +.++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccceE
Confidence 4668999999999999999999875 4679999985432 23567899999999997 9999999999876 67899
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIED 415 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTCCC
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccceecCC
Confidence 99999999999999653 5699999999999999999999999999999999999994 445799999999987653
Q ss_pred CCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .....++..|+|||++. +.++.++|||||||+||||++ |..||.+....+.+..+..+. ..+. ...+++.
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~--~~~~~~~ 492 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPC--PPECPES 492 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC-CCCC--CTTCCHH
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCC--CCCCCHH
Confidence 211 12345678899999875 568999999999999999999 999999888888777776553 2222 2367999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC--CCcccc
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE--HPWMRE 356 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~--hp~f~~ 356 (544)
+.+||.+||+.||.+|||+++|++ ..+|..
T Consensus 493 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 999999999999999999999976 355544
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=338.87 Aligned_cols=249 Identities=22% Similarity=0.315 Sum_probs=201.0
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHh--ccCCCCeeEEEEEEEeC
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH--LSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~~iv~~~~~~~~~ 167 (544)
..+.++|++.+.||+|+||.||+|.+ +++.||||++.. .....+.+|++++.. +. ||||+++++++...
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~------~~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS------REERSWFREAEIYQTVMLR-HENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG------GGHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc------hhHHHHHHHHHHHHHhhcC-CCcEEEEEeeeccc
Confidence 34567899999999999999999997 488999998843 234567889999987 55 99999999999877
Q ss_pred C----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCEeecCCCCceeeecCCCCc
Q 009091 168 Q----SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH--------FMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 168 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH--------~~~ivHrDikp~Nill~~~~~~~ 235 (544)
. .+++||||+++|+|.+++.. ..+++..++.++.|++.||.||| +.||+||||||+|||++ .++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~---~~~ 184 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNG 184 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC---TTS
T ss_pred CCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC---CCC
Confidence 5 89999999999999999976 46999999999999999999999 89999999999999994 445
Q ss_pred cEEEeecCCcccccCCCc-----eecccCCccccCccccccc-------CCCcchHHHHHHHHHHHhhC----------C
Q 009091 236 MLKATDFGLSVFIDEGKV-----YRDIVGSAYYVAPEVLRRS-------YGKEIDVWSAGVILYILLSG----------V 293 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~~l~el~tg----------~ 293 (544)
.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 799999999987655432 2345799999999998653 23689999999999999999 7
Q ss_pred CCCCCCC-----hHHHHHHHHhCCccCCCCcc---cCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 294 PPFWAET-----EKGIFDAILKGGVDFESEPW---LLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 294 ~pf~~~~-----~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.||.... .......+.........+.. ..+++.+.+||.+||+.||.+|||+.++++|
T Consensus 265 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 265 LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 8987642 23334444333332222211 1234578999999999999999999999865
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=342.37 Aligned_cols=248 Identities=22% Similarity=0.329 Sum_probs=204.9
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||.||+|.+.. .+|+|++..... .....+.+.+|+.+++++. ||||+++++++...+.++
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLA 105 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSCEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCceE
Confidence 34669999999999999999999763 499998865432 2233455778999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
+||||++|++|.+++...+ .+++..++.++.||+.||.|||+.||+||||||+|||++ ++.+||+|||++.....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCcccccc
Confidence 9999999999999987654 689999999999999999999999999999999999995 24799999999875432
Q ss_pred ------CCceecccCCccccCcccccc----------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCcc
Q 009091 251 ------GKVYRDIVGSAYYVAPEVLRR----------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD 314 (544)
Q Consensus 251 ------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~ 314 (544)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 261 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP 261 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence 112233468999999998753 3688999999999999999999999988887777776665432
Q ss_pred CCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.. ....++.++.++|.+||..||.+|||+.++++
T Consensus 262 ~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 262 NL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred CC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 22 22357889999999999999999999999986
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=337.22 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=202.1
Q ss_pred ccccceecceecccCCeEEEEEE----ECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 92 IRQFYTLGKELGRGQFGITYLCT----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
..++|++++.||+|+||.||+|. +..++..||+|++... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 114 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 114 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCC-CTTBCCEEEEECC-
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEec
Confidence 34669999999999999999998 4668999999998542 3445678899999999997 99999999998654
Q ss_pred C--eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 168 Q--SVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 168 ~--~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
+ .+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.+ +.+||+|||+
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~---~~~kL~Dfg~ 191 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---NRVKIGDFGL 191 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTT
T ss_pred CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCC---CcEEEecCcc
Confidence 4 789999999999999999876 459999999999999999999999999999999999999543 4799999999
Q ss_pred cccccCCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH------------H---H
Q 009091 245 SVFIDEGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK------------G---I 304 (544)
Q Consensus 245 a~~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~------------~---~ 304 (544)
+......... ....++..|+|||++. ..++.++||||||+++|+|++|..||...... . .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9876543321 2345778899999886 45889999999999999999999998643110 0 1
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..........+ ....+++++.++|.+||+.||.+|||+.++++
T Consensus 272 ~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 272 LIELLKNNGRLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHHTTCCCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhcCCCCC--CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111222222222 22357999999999999999999999999874
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=355.09 Aligned_cols=250 Identities=17% Similarity=0.191 Sum_probs=191.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCe---------------
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNI--------------- 157 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i--------------- 157 (544)
.+.|++++.||+|+||+||+|.+..+|+.||||++...........+.+.+|+.+++.+.+++|+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34588999999999999999999999999999988644433344467789999999988732221
Q ss_pred ------eEEEEEEEe-----CCeEEEEEeccCCCChHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHcCCEee
Q 009091 158 ------VEFRGAYED-----RQSVHLVMELCSGGELFDKIIA-------QGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219 (544)
Q Consensus 158 ------v~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~-------~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHr 219 (544)
..+..++.. ...++++|+++ +++|.+++.. ...+++..+..++.||+.||.|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 111121211 23467888877 6799988852 2336778899999999999999999999999
Q ss_pred cCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccccCcccc----------c-ccCCCcchHHHHHHHHHH
Q 009091 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL----------R-RSYGKEIDVWSAGVILYI 288 (544)
Q Consensus 220 Dikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~----------~-~~~~~~~DiwslG~~l~e 288 (544)
||||+|||++ .++.+||+|||+++..... ....+| +.|+|||++ . ..++.++|||||||++||
T Consensus 236 DiKp~NILl~---~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 236 YLRPVDIVLD---QRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CCCGGGEEEC---TTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CcccceEEEe---cCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999994 4456999999998865443 445678 999999988 2 237789999999999999
Q ss_pred HhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 289 LLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 289 l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|++|+.||...........+.. ....+++.+.+||.+||+.||.+||++.++++||||++.
T Consensus 310 lltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp HHHSSCCCCTTGGGSCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHCCCCCCCcchhhhHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 9999999987655433332222 122578999999999999999999999999999999753
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=344.19 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=188.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHH--HhccCCCCeeEEEEEEEe-----
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM--QHLSGQQNIVEFRGAYED----- 166 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l--~~l~~h~~iv~~~~~~~~----- 166 (544)
++|++++.||+|+||.||+|.+ ++..||||++... ....+..|.+++ ..+. ||||+++++.+..
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA------NRQNFINEKNIYRVPLME-HDNIARFIVGDERVTADG 83 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTTS
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc------chhhHHHHHHHHHHHhcc-CcchhhheecccccccCC
Confidence 4599999999999999999976 5889999998532 233444444443 3465 9999999986542
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---------CCEeecCCCCceeeecCCCCccE
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM---------GVMHRDLKPENFLLSNKDGGAML 237 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~---------~ivHrDikp~Nill~~~~~~~~v 237 (544)
...++|||||+++|+|.+++... ..++..++.++.||+.||.|||+. ||+||||||+|||++ .++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCCcE
Confidence 33678999999999999998765 458899999999999999999999 999999999999994 44579
Q ss_pred EEeecCCcccccCCC---------ceecccCCccccCcccccc--------cCCCcchHHHHHHHHHHHhhCCCCCCCCC
Q 009091 238 KATDFGLSVFIDEGK---------VYRDIVGSAYYVAPEVLRR--------SYGKEIDVWSAGVILYILLSGVPPFWAET 300 (544)
Q Consensus 238 kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~~l~el~tg~~pf~~~~ 300 (544)
||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 1224579999999999864 45678999999999999999987764432
Q ss_pred h-----------------HHHHHHHH-hCCccCCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhh------hCCC
Q 009091 301 E-----------------KGIFDAIL-KGGVDFESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEV------LEHP 352 (544)
Q Consensus 301 ~-----------------~~~~~~i~-~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~el------l~hp 352 (544)
. ........ ........+ ....+++.+.+||.+||+.||++|||+.++ +-++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 1 11111111 111111111 111234579999999999999999999999 5577
Q ss_pred ccccCCC
Q 009091 353 WMREGGE 359 (544)
Q Consensus 353 ~f~~~~~ 359 (544)
|-+....
T Consensus 320 ~~~~~~~ 326 (336)
T 3g2f_A 320 WERNKSV 326 (336)
T ss_dssp CCC----
T ss_pred HHhcccC
Confidence 7766543
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-41 Score=361.59 Aligned_cols=251 Identities=25% Similarity=0.338 Sum_probs=207.4
Q ss_pred ccccccceecceecccCCeEEEEEEECCC---CCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENST---GNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
+...++|++++.||+|+||.||+|.+..+ +..||+|++... ......+.+.+|+.+++++. ||||+++++++.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~- 461 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT- 461 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC-
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEe-
Confidence 33456799999999999999999998654 456899977432 23445578899999999997 999999999985
Q ss_pred CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
.+..++||||+++|+|.+++...+ .+++..++.++.|++.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~---~~~vkL~DFG~a 538 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLS 538 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCCCCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeC---CCCEEEEecCCC
Confidence 466899999999999999998654 6899999999999999999999999999999999999964 357999999999
Q ss_pred ccccCCCce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCccc
Q 009091 246 VFIDEGKVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWL 321 (544)
Q Consensus 246 ~~~~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (544)
......... ....||+.|+|||++. ..++.++|||||||++|||++ |..||.+.........+..+.... ...
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~ 615 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPP 615 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC---CCT
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---CCc
Confidence 876543322 2345778999999886 568999999999999999997 999999888888877776654321 223
Q ss_pred CCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 322 LISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 322 ~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+++.+.+||.+||..||.+|||+.++++
T Consensus 616 ~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 616 NCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 57999999999999999999999999864
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=330.61 Aligned_cols=228 Identities=12% Similarity=0.032 Sum_probs=186.0
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+.++.++. ||||+++++++...+..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC-CCCcceeeEEEEECCcE
Confidence 34567999999999999999999999999999999997655444555678899999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|+||||++|++|.+++.. ......+..++.||+.||.|||++||+||||||+|||++. ++.+||+++|
T Consensus 107 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~---~g~~kl~~~~------- 174 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI---DGDVVLAYPA------- 174 (286)
T ss_dssp EEEEECCCEEEHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET---TSCEEECSCC-------
T ss_pred EEEEEecCCCCHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC---CCCEEEEecc-------
Confidence 999999999999999843 3466678899999999999999999999999999999954 3468887543
Q ss_pred CCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHH---HHHhCCccCCCCcccCCCHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD---AILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~ 327 (544)
|++| ++.++|||||||++|+|++|+.||.+......+. ....+....+......+++++
T Consensus 175 ------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (286)
T 3uqc_A 175 ------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236 (286)
T ss_dssp ------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred ------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence 3333 6889999999999999999999998765432110 001111111111123579999
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.++|.+||+.||.+| |+.++++
T Consensus 237 ~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 237 SAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHHHcccCCccC-CHHHHHH
Confidence 999999999999999 9999876
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=368.11 Aligned_cols=244 Identities=24% Similarity=0.332 Sum_probs=202.4
Q ss_pred ccccccceecceecccCCeEEEEEEECC-CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENS-TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
+.+.++|++.+.||+|+||+||+|.+.. +++.||||++... ........+.+|+.+++++. ||||+++++++...+
T Consensus 76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 152 (681)
T 2pzi_A 76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHTD 152 (681)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEEEC
T ss_pred CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcC-CCCcCeEeeeEeecC
Confidence 4556789999999999999999999976 7899999988543 23445567889999999997 999999999998765
Q ss_pred e-----EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 169 S-----VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 169 ~-----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
. .||||||++|++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||+|||
T Consensus 153 ~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~----~~kl~DFG 226 (681)
T 2pzi_A 153 RHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE----QLKLIDLG 226 (681)
T ss_dssp TTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS----CEEECCCT
T ss_pred CCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC----cEEEEecc
Confidence 5 7999999999999887654 79999999999999999999999999999999999999542 69999999
Q ss_pred CcccccCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
++...... ....||+.|+|||++.+.++.++|||||||++|+|++|..||.+.... ... ...+....
T Consensus 227 ~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------~~~-~~~~~~~~ 293 (681)
T 2pzi_A 227 AVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD---------GLP-EDDPVLKT 293 (681)
T ss_dssp TCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS---------SCC-TTCHHHHH
T ss_pred cchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc---------ccc-cccccccc
Confidence 99876553 346799999999999877889999999999999999999888642111 000 11112234
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
++.+.+||.+||++||.+||++.+.+.|+|+.
T Consensus 294 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 294 YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 67899999999999999999999999998874
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=313.24 Aligned_cols=233 Identities=16% Similarity=0.135 Sum_probs=163.4
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-------hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-------KQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
...+.|+.|.+..++....|..+|+|++.+..... ....+.+.+|+++|+++.+|+||+++++++++++.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 35677888888888888889999999997643221 23456799999999999889999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
||||++|++|.++|...+.+++. .|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSCEEECCCTTEESCC---
T ss_pred EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCCEEEeecccCeeCCCCC
Confidence 99999999999999998888875 4789999999999999999999999999994 4567999999999876543
Q ss_pred CceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
....+.+||+.|||||++.+.+..++|+||+|+++++|.++..++ ...+... +.. ...+..+.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~~----~~~-----~~~~~~l~ 456 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQE----PVE-----RWNFVLLL 456 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHHTS----CGG-----GCSHHHHH
T ss_pred ccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhhcC----CCC-----CCcHHHHH
Confidence 233457899999999999988889999999999999887765443 1111111 111 11346677
Q ss_pred HHhcccCcCCCCChhhhhCCCccc
Q 009091 332 RKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
..+...+|..|+.......++|..
T Consensus 457 ~~l~~~~~~~~~~~~~~~~~~~~~ 480 (569)
T 4azs_A 457 ALFEKKAKLPSAEQQRGATEQWII 480 (569)
T ss_dssp HHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred HHHhCCCCCCCCChhhhccchhHH
Confidence 788888888888887777777753
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-28 Score=221.34 Aligned_cols=186 Identities=29% Similarity=0.510 Sum_probs=152.0
Q ss_pred CCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh
Q 009091 350 EHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL 429 (544)
Q Consensus 350 ~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~ 429 (544)
.|||.+.... .+.++...++.++++|...+++++.++..++..++.++++++.++|..+|.|++|.|+.+||..++..+
T Consensus 8 ~~~~~~~~~~-~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 86 (197)
T 3pm8_A 8 SSGRENLYFQ-GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86 (197)
T ss_dssp ---------C-CSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred cchHhhhccC-CCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh
Confidence 4899987653 455677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc--CCC-CH
Q 009091 430 GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY--GIG-DE 506 (544)
Q Consensus 430 ~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~--g~~-~~ 506 (544)
+..++..++..+|+.+|.|++|.|+|+||+..+.........+.++.+|+.+|.|++|+|+.+||+.++..+ |.. ++
T Consensus 87 g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~ 166 (197)
T 3pm8_A 87 GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLID 166 (197)
T ss_dssp C----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCH
Confidence 999999999999999999999999999999888766555667889999999999999999999999999988 555 78
Q ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 507 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
++++.+|..+|.|+||.|+|+||+.+|+++
T Consensus 167 ~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 167 KAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 899999999999999999999999999875
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-28 Score=257.77 Aligned_cols=185 Identities=17% Similarity=0.154 Sum_probs=144.2
Q ss_pred eecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh-----hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-----QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
...+.||+|+||+||+|. ..+..+++|+......... ...+.+.+|+.++++++ ||||+++..++...+..|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccE
Confidence 446789999999999995 4578899998755333222 12455789999999997 999995555555677779
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||||++|++|.+++.. +..++.|++.||.|||++||+||||||+|||++. .+||+|||+++.....
T Consensus 416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-----~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-----DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----SEEECCCTTCEECCCH
T ss_pred EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----eEEEEECccCEECCCc
Confidence 99999999999998865 6689999999999999999999999999999953 6999999999987653
Q ss_pred Cc--------eecccCCccccCccccc---ccCCCcchHHHHHHHHHHHhhCCCCCC
Q 009091 252 KV--------YRDIVGSAYYVAPEVLR---RSYGKEIDVWSAGVILYILLSGVPPFW 297 (544)
Q Consensus 252 ~~--------~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~~l~el~tg~~pf~ 297 (544)
.. ....+||+.|||||++. ..|+..+|+|+.++-..+.+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 22 13568999999999986 457888999999999998888877763
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=211.81 Aligned_cols=182 Identities=36% Similarity=0.574 Sum_probs=155.7
Q ss_pred CCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh
Q 009091 350 EHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL 429 (544)
Q Consensus 350 ~hp~f~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~ 429 (544)
.|||+..... ...++...++.+|++|...+.+++.++..++..++.+++++++++|..+|.|++|+|+.+||..++..+
T Consensus 3 ~~~~~~~~~~-~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 81 (191)
T 3k21_A 3 HHHHHSSGRE-NLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD 81 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred CCccccCCcc-ccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc
Confidence 5888876643 445677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc--CCC-CH
Q 009091 430 GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY--GIG-DE 506 (544)
Q Consensus 430 ~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~--g~~-~~ 506 (544)
|...+ .++..+|..+|.|++|.|+|+||+..+.... ....+.++.+|+.+|.|++|+|+.+||+.++... |.. ++
T Consensus 82 g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~ 159 (191)
T 3k21_A 82 GLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQ 159 (191)
T ss_dssp TCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCH
T ss_pred CCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCH
Confidence 99888 8999999999999999999999998875543 3556789999999999999999999999999884 333 43
Q ss_pred ---HHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 507 ---ASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 507 ---~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
++++.+|..+|.|+||.|+|+||+.+|+
T Consensus 160 ~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 160 RDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred hHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 4689999999999999999999999875
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=203.58 Aligned_cols=146 Identities=34% Similarity=0.621 Sum_probs=135.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~ 470 (544)
+.|+++++++++++|..||.|++|+|+.+||..+++.+|..++..++..++..+|.|++|.|+|.||+..+..... ...
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999987765433 334
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
.+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++++|+.+| |+||.|+|+||+++|+++..
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~~~ 150 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGSS 150 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCCSS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999988 9999999999999 99999999999999988754
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=195.54 Aligned_cols=143 Identities=35% Similarity=0.618 Sum_probs=133.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~ 471 (544)
.|+++++++++++|..||.|++|+|+.+||..+++.++..++..++..++..+|.+++|.|+|.||+..+..... ....
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence 478999999999999999999999999999999999999999999999999999999999999999987765433 3456
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+++|.+
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 789999999999999999999999999999998 9999999999999999999999999999875
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=215.27 Aligned_cols=145 Identities=39% Similarity=0.698 Sum_probs=132.5
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-cc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LE 469 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~ 469 (544)
...|+++++++++++|..||.|++|+|+.+||..+|+.+|..+++.++..+|+.+|.|++|.|+|+||+..+..... ..
T Consensus 293 ~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 293 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp CBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred HhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999988765432 34
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++++|+.+|.|+||.|+|+||+++|.+
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 56789999999999999999999999999999988 9999999999999999999999999999865
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=194.19 Aligned_cols=144 Identities=23% Similarity=0.376 Sum_probs=129.8
Q ss_pred hhhHHHHhhHHHHhcccCC--CCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc---c
Q 009091 393 ALSEEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY---R 467 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~--~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~---~ 467 (544)
.|+++++++++++|..||. |++|+|+..||..+|+.+|..++..++..++. .|.+++|.|+|.||+..+.... .
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence 5889999999999999995 89999999999999999999999999998765 4778899999999998765432 2
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCC--CCCcceeHHHHHHHHhcCC
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDT--DNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~--~~dg~i~~~eF~~~~~~~~ 537 (544)
....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+++.+|. |+||.|+|+||+++|.+++
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p 153 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGP 153 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCCC
Confidence 3456789999999999999999999999999999998 99999999999995 8899999999999998864
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=188.19 Aligned_cols=139 Identities=29% Similarity=0.594 Sum_probs=127.5
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccchHHH
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDEHL 474 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~~~ 474 (544)
++++++++++|..||.|++|+|+.+||..+++.+|..++..++..++..+|.|++|.|+|+||+..+..... ......+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l 81 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999987654322 2234678
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 475 YKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 475 ~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
+.+|+.||+|++|+|+.+||+.++..+|.. ++++++++|..+|.|+||.|+|+||+.+|.
T Consensus 82 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 999999999999999999999999999988 899999999999999999999999999875
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-25 Score=213.12 Aligned_cols=159 Identities=23% Similarity=0.241 Sum_probs=122.7
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---------------hcHHHHHHHHHHHHhccCCCCeeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---------------QDREDIKREIQIMQHLSGQQNIVE 159 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~~h~~iv~ 159 (544)
.|.+++.||+|+||.||+|.+ .+|..||+|++........ .....+.+|+.+++++. |+++..
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 466779999999999999999 7899999999854321111 13567889999999997 555555
Q ss_pred EEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEE
Q 009091 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239 (544)
Q Consensus 160 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl 239 (544)
++ .. +..|+||||++|++|.+ +. ......++.|++.||.|||+.||+||||||+|||++ ++.+||
T Consensus 169 ~~---~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~vkl 233 (282)
T 1zar_A 169 VY---AW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWI 233 (282)
T ss_dssp EE---EE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEE
T ss_pred EE---ec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcEEE
Confidence 43 33 45689999999999987 41 123557999999999999999999999999999996 457999
Q ss_pred eecCCcccccCCCceecccCCccccCccccc-----------ccCCCcchHHHH
Q 009091 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-----------RSYGKEIDVWSA 282 (544)
Q Consensus 240 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-----------~~~~~~~Diwsl 282 (544)
+|||+|+. +..++|||.+. ..|+..+|+|.+
T Consensus 234 ~DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 234 IDFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp CCCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred EECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 99999863 34578999874 235666777653
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-24 Score=186.70 Aligned_cols=141 Identities=23% Similarity=0.478 Sum_probs=128.6
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~ 471 (544)
.|+++++++++++|..||.|++|+|+.+||..+++.+|..++..++..++. +.+|.|+|.+|+..+..... ....
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~~ 84 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDPE 84 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCCH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhcccccH
Confidence 589999999999999999999999999999999999999999999888876 45678999999988765543 3456
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.||+.+|.| ||.|+|+||+++|.+...
T Consensus 85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~~~ 151 (153)
T 3i5g_B 85 DALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKAED 151 (153)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCSCC
T ss_pred HHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCCCC
Confidence 789999999999999999999999999999988 999999999999988 999999999999988754
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=197.75 Aligned_cols=171 Identities=34% Similarity=0.559 Sum_probs=156.3
Q ss_pred cccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh-----------CC
Q 009091 364 PIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL-----------GS 431 (544)
Q Consensus 364 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~-----------~~ 431 (544)
++...++.+|+++...+.+++.++..++..+ ++++++++.++|..+|.|++|.|+.+||..++..+ +.
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 82 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 82 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence 4557788999999999999999999999888 88999999999999999999999999999999987 66
Q ss_pred CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHH
Q 009091 432 KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIK 510 (544)
Q Consensus 432 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~ 510 (544)
..+..++..+|..+|.|++|.|+|+||+..+.........+.++.+|+.+|.|++|+|+.+||+.++. |.. ++++++
T Consensus 83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~ 160 (191)
T 3khe_A 83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWH 160 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHH
T ss_pred hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHH
Confidence 67788999999999999999999999998876655556678899999999999999999999999998 666 889999
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 511 EIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 511 ~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.+|..+|.|+||.|+|+||+.+|.+-
T Consensus 161 ~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 161 QVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999998753
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=190.12 Aligned_cols=166 Identities=25% Similarity=0.491 Sum_probs=147.4
Q ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHhhhh--HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHH
Q 009091 366 GSAVLSRMKQFRAMNKLKKMALKVIAEALS--EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMD 443 (544)
Q Consensus 366 ~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~--~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 443 (544)
...++.+|++|...+.+++.++..+...++ +++++++.++|..+|.|++|+|+.+||..++..+|. +..++..+|.
T Consensus 3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~ 80 (180)
T 3mse_B 3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQ 80 (180)
T ss_dssp CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHH
Confidence 356889999999999999999999999988 899999999999999999999999999999999986 4689999999
Q ss_pred hcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCC-
Q 009091 444 AADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDND- 521 (544)
Q Consensus 444 ~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~d- 521 (544)
.+|.|++|.|+|+||+..+..... ...+.++.+|+.+|+|++|+|+.+||+.++. +.. ++++++.+|..+|.|+|
T Consensus 81 ~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~ 157 (180)
T 3mse_B 81 ALDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKG 157 (180)
T ss_dssp HHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---
T ss_pred HhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCc
Confidence 999999999999999987765433 2346799999999999999999999999998 444 88999999999999998
Q ss_pred -------cceeHHHHHHHHhcC
Q 009091 522 -------GRINYEEFCTMMRSG 536 (544)
Q Consensus 522 -------g~i~~~eF~~~~~~~ 536 (544)
|.|+|+||+.+|.+.
T Consensus 158 ~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 158 IPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp ------CCCBCHHHHHHHHHTT
T ss_pred ccccccCCeeeHHHHHHHHHhc
Confidence 999999999998763
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.91 E-value=9e-24 Score=184.57 Aligned_cols=144 Identities=42% Similarity=0.704 Sum_probs=131.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~ 470 (544)
..++++++++++++|..+|.|++|.|+.+||..+++.+|..++..++..+|..+|.|++|.|+|.||+..+..... ...
T Consensus 2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 81 (148)
T 1exr_A 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS 81 (148)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCc
Confidence 3578889999999999999999999999999999999999999999999999999999999999999987754322 234
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 5678899999999999999999999999999988 8999999999999999999999999999865
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-24 Score=188.53 Aligned_cols=161 Identities=61% Similarity=1.026 Sum_probs=137.7
Q ss_pred HHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceee
Q 009091 375 QFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454 (544)
Q Consensus 375 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~ 454 (544)
+|...+.+++.++..+...+++++++++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+
T Consensus 2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~ 81 (166)
T 2aao_A 2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID 81 (166)
T ss_dssp ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBC
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEc
Confidence 56677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 455 YIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 455 ~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
|.||+..+.........+.++.+|+.+|.|++|+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 160 (166)
T 2aao_A 82 YKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV-EDVRIEELMRDVDQDNDGRIDYNEFVAMMQ 160 (166)
T ss_dssp HHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC---------CCHHHHHCTTCSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 9999988765444445678999999999999999999999999988775 567899999999999999999999999987
Q ss_pred cC
Q 009091 535 SG 536 (544)
Q Consensus 535 ~~ 536 (544)
+.
T Consensus 161 ~~ 162 (166)
T 2aao_A 161 KG 162 (166)
T ss_dssp --
T ss_pred hc
Confidence 64
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=183.61 Aligned_cols=146 Identities=27% Similarity=0.521 Sum_probs=134.0
Q ss_pred hhhhHHHHhhHHHHhcccC-CCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc--
Q 009091 392 EALSEEEIKGLKTMFANMD-TDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL-- 468 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D-~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~-- 468 (544)
..++++++.+++++|..+| .|++|+|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 4578889999999999999 9999999999999999999999999999999999999999999999999887654322
Q ss_pred ---cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 469 ---ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 469 ---~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.....++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+.+
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 157 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSSCC
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhccC
Confidence 345678999999999999999999999999999988 899999999999999999999999999987754
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-23 Score=178.62 Aligned_cols=145 Identities=35% Similarity=0.620 Sum_probs=131.3
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-c
Q 009091 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-L 468 (544)
Q Consensus 390 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~ 468 (544)
|...+++++++++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+..... .
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 80 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCN 80 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTH
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCC
Confidence 346789999999999999999999999999999999999999999999999999999999999999999988764322 2
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...+.+..+|+.+|+|++|+|+.+||+.++..+|.. ++++++.++..+| |+||.|+|+||+.+|.+
T Consensus 81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~k 147 (147)
T 4ds7_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLSK 147 (147)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTTC
T ss_pred CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHhC
Confidence 345778999999999999999999999999999988 8999999999999 99999999999998763
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.9e-23 Score=183.08 Aligned_cols=146 Identities=36% Similarity=0.607 Sum_probs=132.2
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~ 470 (544)
..+++++++++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+..... ...
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 4678899999999999999999999999999999999999999999999999999999999999999988764332 223
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.+..+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+.+
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 167 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence 5678899999999999999999999999999988 899999999999999999999999999988653
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=178.67 Aligned_cols=138 Identities=28% Similarity=0.548 Sum_probs=127.5
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc-ccccchHHH
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR-YRLERDEHL 474 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~~~~~ 474 (544)
++++++++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+... ........+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL 81 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999999999887652 233456789
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 475 YKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 475 ~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
+.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+| |+||.|+|+||+.+|.
T Consensus 82 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 82 RQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 999999999999999999999999999987 8999999999999 9999999999998764
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=182.25 Aligned_cols=144 Identities=32% Similarity=0.541 Sum_probs=131.7
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccccc-
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE- 469 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~- 469 (544)
...+++++++++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 81 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET 81 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence 3568899999999999999999999999999999999999999999999999999999999999999998875433222
Q ss_pred ----chHHHHHHHhhhccCCCCcccHHHHHHHHHH-cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 470 ----RDEHLYKAFQYFDKDNSGYITRDELETAMKD-YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ----~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+.++.+|+.+|.|++|+|+.+||+.+|.. +|.. ++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2467899999999999999999999999999 8888 899999999999999999999999999875
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=180.08 Aligned_cols=144 Identities=28% Similarity=0.508 Sum_probs=133.6
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~ 470 (544)
..+++++++++.++|..+|.+++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.... ....
T Consensus 15 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 94 (161)
T 3fwb_A 15 SELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDP 94 (161)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCc
Confidence 468899999999999999999999999999999999999999999999999999999999999999998876532 2344
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 6789999999999999999999999999999988 9999999999999999999999999999875
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.89 E-value=6e-23 Score=180.92 Aligned_cols=145 Identities=24% Similarity=0.410 Sum_probs=133.6
Q ss_pred hhhHHHHhhHHHHhcccCC--CCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc--c
Q 009091 393 ALSEEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR--L 468 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~--~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~--~ 468 (544)
.|+++++++++++|..+|. |++|.|+.+||..++..+|..++..++..+ ..+|.|++|.|+|.||+..+..... .
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 4788899999999999999 999999999999999999999999999999 9999999999999999988765433 4
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHH--hCCCCCcceeHHHHHHHHhcCCC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISE--VDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~--~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
.....++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|.. +|.|+||.|+|+||+.+|.+.+.
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 153 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPY 153 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCSC
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCCC
Confidence 556789999999999999999999999999999988 89999999999 99999999999999999988643
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-23 Score=181.68 Aligned_cols=146 Identities=32% Similarity=0.586 Sum_probs=132.1
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCC-CCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc--
Q 009091 390 IAEALSEEEIKGLKTMFANMDTDK-SGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-- 466 (544)
Q Consensus 390 ~~~~~~~~~~~~l~~~F~~~D~~~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-- 466 (544)
+...+++.++++++++|..+|.|+ +|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 456788999999999999999999 99999999999999999999999999999999999999999999998876543
Q ss_pred --cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 467 --RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 467 --~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.......++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 23456778999999999999999999999999999987 8999999999999999999999999999875
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-23 Score=181.33 Aligned_cols=138 Identities=21% Similarity=0.394 Sum_probs=124.5
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhc-CCCCCceeeehhhhhhhhcc------ccccc
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA-DVDGNGTIDYIEFISATMHR------YRLER 470 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~------~~~~~ 470 (544)
++++++++|..+|.|++|.|+.+||..++..++..++..++..+|..+ |.|++|.|+|.||+..+... .....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 81 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK 81 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence 456788899999999999999999999999999999999999999999 99999999999999887655 33456
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 6889999999999999999999999999999988 8999999999999999999999999999875
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=178.40 Aligned_cols=148 Identities=33% Similarity=0.592 Sum_probs=134.9
Q ss_pred HHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc
Q 009091 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR 467 (544)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 467 (544)
..+...+++++++++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.....
T Consensus 8 ~~~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 87 (162)
T 1top_A 8 AEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87 (162)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHH
T ss_pred HHhhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhc
Confidence 44566799999999999999999999999999999999999999999999999999999999999999999987754332
Q ss_pred c-c---chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 468 L-E---RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 468 ~-~---~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
. . ....++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 88 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 88 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 1 1 45678999999999999999999999999999987 8999999999999999999999999999875
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=182.45 Aligned_cols=146 Identities=40% Similarity=0.709 Sum_probs=128.8
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-cc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LE 469 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~ 469 (544)
+..++++++++++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+..... ..
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~ 81 (179)
T 2f2o_A 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 81 (179)
T ss_dssp ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence 45678889999999999999999999999999999999999999999999999999999999999999987754322 23
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
....++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.+|...
T Consensus 82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 45678999999999999999999999999999987 89999999999999999999999999998754
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=173.63 Aligned_cols=141 Identities=21% Similarity=0.381 Sum_probs=129.8
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhc---CCCCCceeeehhhhhhhhcc---cc
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA---DVDGNGTIDYIEFISATMHR---YR 467 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~---D~d~dg~i~~~eF~~~~~~~---~~ 467 (544)
++++++++++++|..+|.|++|+|+.+||..++..++..++..++..+|..+ |.|+ |.|+|+||+..+... ..
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 6788999999999999999999999999999999999999999999999999 9999 999999999887654 22
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
......++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|.. |.|+||.|+|+||+.+|.++
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~~ 149 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMSV 149 (149)
T ss_pred cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhcC
Confidence 3456788999999999999999999999999999988 89999999999 99999999999999998753
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=176.22 Aligned_cols=140 Identities=24% Similarity=0.516 Sum_probs=128.5
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccchH
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLERDE 472 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~~~ 472 (544)
|+++++++++++|..+|.|++|+|+.+||..++..+|..++..++..++.. ++|.|+|+||+..+.... .....+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 577899999999999999999999999999999999999999999888876 899999999998876533 234567
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+++
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 142 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSSC
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhccC
Confidence 89999999999999999999999999999988 899999999999999999999999999999864
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=189.52 Aligned_cols=155 Identities=18% Similarity=0.238 Sum_probs=138.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCcee
Q 009091 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453 (544)
Q Consensus 374 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i 453 (544)
..+.....++...+..+...++.+++++++++|..+|.|++|.|+.+||..++..+|..++..++..+|+.+|.|++|.|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I 104 (220)
T 3sjs_A 25 CIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHI 104 (220)
T ss_dssp HHHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCB
T ss_pred hccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 34445556666666677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 009091 454 DYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTM 532 (544)
Q Consensus 454 ~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~ 532 (544)
+|+||+..+.. ...++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.++..+| |+||.|+|+||+++
T Consensus 105 ~~~EF~~~~~~------~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~ 177 (220)
T 3sjs_A 105 SFYEFMAMYKF------MELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAI 177 (220)
T ss_dssp CHHHHHHHHHH------HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHH
T ss_pred CHHHHHHHHHH------HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHH
Confidence 99999887654 2678999999999999999999999999999988 8999999999999 99999999999998
Q ss_pred Hhc
Q 009091 533 MRS 535 (544)
Q Consensus 533 ~~~ 535 (544)
|..
T Consensus 178 ~~~ 180 (220)
T 3sjs_A 178 CAF 180 (220)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=176.43 Aligned_cols=146 Identities=22% Similarity=0.453 Sum_probs=131.9
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCC-CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RL 468 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~ 468 (544)
...+++.+++++..+|..+|.|++|.|+.+||..++..++. .++..++..++... +|.|+|.||+..+.... ..
T Consensus 16 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~ 91 (166)
T 2mys_B 16 FSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGA 91 (166)
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccC
Confidence 34678899999999999999999999999999999999999 99999999999864 79999999998876532 23
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCCCC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~ 540 (544)
.....++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+..+..
T Consensus 92 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~~~~~ 164 (166)
T 2mys_B 92 DPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGEDAE 164 (166)
T ss_pred CcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhccccc
Confidence 456789999999999999999999999999999987 899999999999999999999999999999876654
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-23 Score=179.96 Aligned_cols=142 Identities=22% Similarity=0.418 Sum_probs=120.8
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC--CCceeeehhhhhhhhcccc---
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD--GNGTIDYIEFISATMHRYR--- 467 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~eF~~~~~~~~~--- 467 (544)
.|+++++++++++|..+|.|++|+|+.+||..++..++..++..++..+|..+|.| ++|.|+|+||+..+.....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 46788999999999999999999999999999999999999999999999999999 9999999999988765332
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
......++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+| |+||.|+|+||+.+|.+
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 1234567889999999999999999999999999988 8999999999999 99999999999998865
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.3e-22 Score=171.47 Aligned_cols=139 Identities=27% Similarity=0.488 Sum_probs=126.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc--ccccch
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR--YRLERD 471 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~--~~~~~~ 471 (544)
+++++ ++++|..+|.|++|.|+.+||..++..++..++..++..+|.. |++|.|+|+||+..+... ......
T Consensus 2 ls~~e---l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~ 75 (145)
T 2bl0_B 2 ASADQ---IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQS 75 (145)
T ss_dssp CCHHH---HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGH
T ss_pred CCHHH---HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccH
Confidence 34444 8899999999999999999999999999999999999999998 789999999999887654 234456
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
..++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|.++.+
T Consensus 76 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 143 (145)
T 2bl0_B 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGYP 143 (145)
T ss_dssp HHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhcCC
Confidence 789999999999999999999999999999987 8999999999999999999999999999998754
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=171.50 Aligned_cols=146 Identities=18% Similarity=0.447 Sum_probs=128.3
Q ss_pred HHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-c
Q 009091 389 VIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-R 467 (544)
Q Consensus 389 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~ 467 (544)
.+...++++++++++.+|..+|.|++|.|+.+||..++..+|..++..++..++. +++|.|+|+||+..+.... .
T Consensus 7 ~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~ 82 (156)
T 1wdc_B 7 GVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG 82 (156)
T ss_dssp -----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS
T ss_pred chhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcC
Confidence 3445688899999999999999999999999999999999999999999999986 4789999999998876432 2
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCCC
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQ 539 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 539 (544)
......++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.| ||.|+|+||+.+|.+..+.
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~~~ 154 (156)
T 1wdc_B 83 TDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSGEE 154 (156)
T ss_dssp CCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSCC-
T ss_pred CChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcCccc
Confidence 3456789999999999999999999999999999988 899999999999999 9999999999999987653
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-23 Score=185.89 Aligned_cols=145 Identities=61% Similarity=0.981 Sum_probs=130.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
..|+++++++++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.........
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 81 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence 35778888999999999999999999999999999999999999999999999999999999999999877654333445
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
..++.+|+.+|+|++|+|+.+||+.+|..+|. ++++++.+|..+|.|+||.|+|+||+.+|.+..
T Consensus 82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~-~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 146 (188)
T 1s6i_A 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (188)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHcC
Confidence 67899999999999999999999999998885 567899999999999999999999999997543
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=175.52 Aligned_cols=143 Identities=22% Similarity=0.310 Sum_probs=127.4
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHH----HHHHhCCCCCHHHHH-----------HHHHhcCCCCCceeeehhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKT----GLARLGSKLSETEVK-----------QLMDAADVDGNGTIDYIEF 458 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~----~l~~~~~~~~~~~~~-----------~~~~~~D~d~dg~i~~~eF 458 (544)
++++++++++++|..+|.|++|+|+.+||.. ++..+|..++..++. .+|..+|.|++|.|+|+||
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef 80 (176)
T 1nya_A 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80 (176)
T ss_dssp CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 3567889999999999999999999999999 688899999988877 8999999999999999999
Q ss_pred hhhhhccccccc--------hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHH
Q 009091 459 ISATMHRYRLER--------DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFC 530 (544)
Q Consensus 459 ~~~~~~~~~~~~--------~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~ 530 (544)
+..+........ ...++.+|+.+|.|++|+|+.+||+.++..+| .++++++.+|..+|.|+||.|+|+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~~~~~~~D~d~dg~i~~~ef~ 159 (176)
T 1nya_A 81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAAEAFNQVDTNGNGELSLDELL 159 (176)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 988765433222 35689999999999999999999999999998 688899999999999999999999999
Q ss_pred HHHhcCC
Q 009091 531 TMMRSGT 537 (544)
Q Consensus 531 ~~~~~~~ 537 (544)
.+|..-.
T Consensus 160 ~~~~~~~ 166 (176)
T 1nya_A 160 TAVRDFH 166 (176)
T ss_dssp HHHSCCS
T ss_pred HHHHHHh
Confidence 9998653
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=178.90 Aligned_cols=144 Identities=24% Similarity=0.314 Sum_probs=121.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHH-----HHHHHhCCCCCHH-----HHHHHHHhcCCCCCceeeehhhhhh
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELK-----TGLARLGSKLSET-----EVKQLMDAADVDGNGTIDYIEFISA 461 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~-----~~l~~~~~~~~~~-----~~~~~~~~~D~d~dg~i~~~eF~~~ 461 (544)
..+++++++++.++|..+|.|++|+|+.+||. .++..+|..++.. ++..+|..+|.|++|.|+|+||+..
T Consensus 12 ~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 91 (195)
T 1qv0_A 12 DFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDG 91 (195)
T ss_dssp CTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHH
Confidence 44689999999999999999999999999999 7888888877766 6899999999999999999999887
Q ss_pred hhcccc-------ccchHHHH----HHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHH
Q 009091 462 TMHRYR-------LERDEHLY----KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEF 529 (544)
Q Consensus 462 ~~~~~~-------~~~~~~~~----~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF 529 (544)
+..... ....+.++ .+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF 171 (195)
T 1qv0_A 92 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171 (195)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHH
Confidence 644321 11112243 89999999999999999999999999988 8999999999999999999999999
Q ss_pred HHHHhc
Q 009091 530 CTMMRS 535 (544)
Q Consensus 530 ~~~~~~ 535 (544)
+.++..
T Consensus 172 ~~~~~~ 177 (195)
T 1qv0_A 172 TRQHLG 177 (195)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=180.70 Aligned_cols=144 Identities=19% Similarity=0.286 Sum_probs=121.6
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCC--CCCHHHHHHHH-------HhcCCCCCceeeehhhhhhh
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS--KLSETEVKQLM-------DAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--~~~~~~~~~~~-------~~~D~d~dg~i~~~eF~~~~ 462 (544)
..|+++++++++++|..+|.|++|.|+.+||..++..++. .++..++..++ ..+|.|++|.|+|+||+..+
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~ 107 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN 107 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 5678888999999999999999999999999999999987 89999999999 99999999999999999887
Q ss_pred h---------cc-ccccchHH-HHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHH
Q 009091 463 M---------HR-YRLERDEH-LYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCT 531 (544)
Q Consensus 463 ~---------~~-~~~~~~~~-~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~ 531 (544)
. .. ......+. ++.+|+.+|+|++|+|+.+||+.++..+| .++++++.+|..+|.|+||.|+|+||+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 186 (208)
T 2hpk_A 108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-VPQEAAYTFFEKADTDKSGKLERTELVH 186 (208)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-SCTTHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-cCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 5 11 11222333 78999999999999999999999999999 5677899999999999999999999999
Q ss_pred HHhcC
Q 009091 532 MMRSG 536 (544)
Q Consensus 532 ~~~~~ 536 (544)
++...
T Consensus 187 ~~~~~ 191 (208)
T 2hpk_A 187 LFRKF 191 (208)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=177.48 Aligned_cols=143 Identities=22% Similarity=0.287 Sum_probs=125.4
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHH-----HHHHHhCCCCCHH-----HHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELK-----TGLARLGSKLSET-----EVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~-----~~l~~~~~~~~~~-----~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
.++++++++++++|..+|.|++|+|+.+||. .++..+|..++.. ++..+|+.+|.|++|.|+|+||+..+
T Consensus 9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~ 88 (191)
T 1uhk_A 9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW 88 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHH
Confidence 4578889999999999999999999999999 7888899888777 68999999999999999999998876
Q ss_pred hcccc-------ccchHHH----HHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHH
Q 009091 463 MHRYR-------LERDEHL----YKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFC 530 (544)
Q Consensus 463 ~~~~~-------~~~~~~~----~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~ 530 (544)
..... ....+.+ +.+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~ 168 (191)
T 1uhk_A 89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 168 (191)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHH
T ss_pred HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 54321 1111223 389999999999999999999999999987 89999999999999999999999999
Q ss_pred HHHhc
Q 009091 531 TMMRS 535 (544)
Q Consensus 531 ~~~~~ 535 (544)
.+|..
T Consensus 169 ~~~~~ 173 (191)
T 1uhk_A 169 RQHLG 173 (191)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=178.22 Aligned_cols=140 Identities=24% Similarity=0.404 Sum_probs=125.9
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc------
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY------ 466 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~------ 466 (544)
.++++++++++++|..+|.|++|+|+.+||..+ ..++..++ +..+|..+|.|++|.|+|+||+..+....
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~ 97 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED 97 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence 578899999999999999999999999999999 77876665 89999999999999999999998876543
Q ss_pred -----------cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CCC-CHHHHHHHHHH----hCCCCCcceeHHHH
Q 009091 467 -----------RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GIG-DEASIKEIISE----VDTDNDGRINYEEF 529 (544)
Q Consensus 467 -----------~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~~-~~~~~~~~~~~----~d~~~dg~i~~~eF 529 (544)
.....+.++.+|+.+|.|++|+|+.+||+.++..+ |.. ++++++.++.. +|.|+||.|+|+||
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF 177 (202)
T 2bec_A 98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177 (202)
T ss_dssp HC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHH
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHH
Confidence 23445789999999999999999999999999999 887 88899998888 99999999999999
Q ss_pred HHHHhcC
Q 009091 530 CTMMRSG 536 (544)
Q Consensus 530 ~~~~~~~ 536 (544)
+.+|.+.
T Consensus 178 ~~~~~~~ 184 (202)
T 2bec_A 178 TKSLEKM 184 (202)
T ss_dssp HHTTTTS
T ss_pred HHHHHHh
Confidence 9988754
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-21 Score=177.80 Aligned_cols=142 Identities=20% Similarity=0.434 Sum_probs=129.4
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~ 470 (544)
..++..++.++.++|..||.|++|+|+.+||..+|..+|..++..++..++..+ +|.|+|.||+..+.... ....
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~ 124 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE 124 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence 347788888999999999999999999999999999999999999999999987 89999999998876533 2345
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
...+..+|+.||.|++|+|+.+||+.+| .+|.. ++++++.+|..+|.|+||.|+|+||+.+|...+.
T Consensus 125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~ 192 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGAK 192 (196)
T ss_dssp HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCCB
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCCc
Confidence 6789999999999999999999999999 99988 8999999999999999999999999999988754
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-21 Score=175.21 Aligned_cols=143 Identities=13% Similarity=0.203 Sum_probs=127.4
Q ss_pred hhhhHHHHhhHHHHhccc-CCCCCCccCHHHHHHHHHHh----CCCCCHHHHHHHH-----------HhcCCCCCceeee
Q 009091 392 EALSEEEIKGLKTMFANM-DTDKSGTITYEELKTGLARL----GSKLSETEVKQLM-----------DAADVDGNGTIDY 455 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~-D~~~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~-----------~~~D~d~dg~i~~ 455 (544)
..+++.+++++.++|..+ |.|++|+|+.+||..++..+ |..++..++..++ ..+|.|++|.|++
T Consensus 4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~ 83 (191)
T 2ccm_A 4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK 83 (191)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence 356788889999999999 99999999999999999998 8888888888888 9999999999999
Q ss_pred hhhhhhhhccc---------cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeH
Q 009091 456 IEFISATMHRY---------RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINY 526 (544)
Q Consensus 456 ~eF~~~~~~~~---------~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~ 526 (544)
+||+..+.... .......++.+|+.+|+|+||+|+.+||+.++..+| .++++++.+|..+|.|+||.|+|
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-~~~~~~~~~~~~~D~d~dG~i~~ 162 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-IPKSDCDAAFDTLSDGGKTMVTR 162 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-CCHHHHHHHHHHHTTTTTSCCBH
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCCcCH
Confidence 99988765432 122346788999999999999999999999999988 57889999999999999999999
Q ss_pred HHHHHHHhc
Q 009091 527 EEFCTMMRS 535 (544)
Q Consensus 527 ~eF~~~~~~ 535 (544)
+||+.++..
T Consensus 163 ~Ef~~~~~~ 171 (191)
T 2ccm_A 163 EIFARLWTE 171 (191)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-21 Score=177.79 Aligned_cols=142 Identities=26% Similarity=0.474 Sum_probs=122.4
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHH
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHL 474 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~ 474 (544)
...+++++.++|..+|.|++|+|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.........+.+
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~ 111 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI 111 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999888765555556789
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHH-------cCCC-CHHHHHHHHHHhCC-CCCcceeHHHHHHHHhcC
Q 009091 475 YKAFQYFDKDNSGYITRDELETAMKD-------YGIG-DEASIKEIISEVDT-DNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 475 ~~~F~~~D~d~dG~Is~~el~~~l~~-------~g~~-~~~~~~~~~~~~d~-~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|+.+|.|++|+|+.+||+.++.. .|.. .+++++.+|..+|. |+||.|+|+||+.++..-
T Consensus 112 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~ 182 (204)
T 3e3r_A 112 AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGV 182 (204)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHc
Confidence 99999999999999999999999974 4555 66789999999998 999999999999998753
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-21 Score=166.03 Aligned_cols=133 Identities=23% Similarity=0.370 Sum_probs=120.4
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc---ccchHHHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR---LERDEHLY 475 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~---~~~~~~~~ 475 (544)
+++++++|..+|.|++|+|+.+||..++..++..++..++..++. +++|.|+|+||+..+..... ......++
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 79 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence 467889999999999999999999999999999999999999987 88999999999988765432 22347899
Q ss_pred HHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 476 ~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|. +||.|+|+||+.+|.++
T Consensus 80 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~~ 140 (140)
T 1ggw_A 80 KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILAN 140 (140)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHCC
T ss_pred HHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhcC
Confidence 99999999999999999999999999988 89999999999999 99999999999998763
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.2e-21 Score=167.18 Aligned_cols=138 Identities=34% Similarity=0.619 Sum_probs=121.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccchHH
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDEH 473 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~~ 473 (544)
+++++++++++|..+|.|++|.|+.+|| ..+..++... ++..+|..+|.|++|.|+|+||+..+..... ....+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 76 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQK 76 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHH
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHH
Confidence 3578899999999999999999999999 6677776544 7889999999999999999999988765432 345678
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHH-cCCC-CHHHHHHHHHH----hCCCCCcceeHHHHHHHHhcC
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKD-YGIG-DEASIKEIISE----VDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~-~g~~-~~~~~~~~~~~----~d~~~dg~i~~~eF~~~~~~~ 536 (544)
++.+|+.+|.|++|+|+.+||+.++.. +|.. ++++++.++.. +|.|+||.|+|+||+.+|...
T Consensus 77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 999999999999999999999999999 5877 88899998888 999999999999999999864
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=189.31 Aligned_cols=144 Identities=40% Similarity=0.709 Sum_probs=129.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~ 470 (544)
..++.+++++++++|..+|.|++|.|+.+||..+|..++..++.+++..+|+.+|.|++|.|+|+||+..+.... ....
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 356778889999999999999999999999999999999999999999999999999999999999998876533 2345
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 6789999999999999999999999999999988 9999999999999999999999999999864
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-21 Score=184.21 Aligned_cols=141 Identities=14% Similarity=0.119 Sum_probs=107.1
Q ss_pred ceecceecccCCeEEEEEEECCCCCe--EEEEEEeeccccC---------------------hhcHHHHHHHHHHHHhcc
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNS--YACKSILKRKLVN---------------------KQDREDIKREIQIMQHLS 152 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~l~ 152 (544)
|.+.+.||+|+||.||+|.+..+|.. ||||++....... ......+.+|+.+|.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999998778989 9999875432110 011236789999999997
Q ss_pred CCCC--eeEEEEEEEeCCeEEEEEeccCC-C----ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCCEeecCCCC
Q 009091 153 GQQN--IVEFRGAYEDRQSVHLVMELCSG-G----ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMGVMHRDLKPE 224 (544)
Q Consensus 153 ~h~~--iv~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~ivHrDikp~ 224 (544)
|++ ++.++.. +..+|||||+.+ | +|.+.... .++..+..++.|++.||.||| +.||+||||||+
T Consensus 129 -~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~ 200 (258)
T 1zth_A 129 -EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEY 200 (258)
T ss_dssp -HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred -hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 654 3444433 345899999942 3 66654322 235567899999999999999 999999999999
Q ss_pred ceeeecCCCCccEEEeecCCccccc
Q 009091 225 NFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 225 Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||++. .++|+|||+|....
T Consensus 201 NILl~~-----~~~liDFG~a~~~~ 220 (258)
T 1zth_A 201 NIMYID-----KVYFIDMGQAVTLR 220 (258)
T ss_dssp SEEESS-----SEEECCCTTCEETT
T ss_pred HEEEcC-----cEEEEECcccccCC
Confidence 999953 69999999997653
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=166.17 Aligned_cols=138 Identities=23% Similarity=0.353 Sum_probs=119.2
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHH----HHhCCCCCHHHHHHH-----------HHhcCCCCCceeeehhhhhhh
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGL----ARLGSKLSETEVKQL-----------MDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l----~~~~~~~~~~~~~~~-----------~~~~D~d~dg~i~~~eF~~~~ 462 (544)
++++++++|..+|.|++|+|+.+||..++ ..+|..++..++..+ |..+|.|++|.|+|+||+..+
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 45679999999999999999999999975 456888888877644 799999999999999999877
Q ss_pred hccccccc-------hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 463 MHRYRLER-------DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 463 ~~~~~~~~-------~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
........ ...++.+|+.+|.|++|+|+.+||+.++..+| .++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-VPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 54322111 23488999999999999999999999999998 68889999999999999999999999999875
Q ss_pred C
Q 009091 536 G 536 (544)
Q Consensus 536 ~ 536 (544)
-
T Consensus 161 ~ 161 (166)
T 3akb_A 161 Y 161 (166)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=172.07 Aligned_cols=131 Identities=21% Similarity=0.382 Sum_probs=121.2
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F 478 (544)
.++++++|..+|.|++|.|+.+||..++..++..++..++..+|+.+|.|++|.|+|+||+..+.. ...++.+|
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~------~~~~~~~F 99 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGF 99 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH------HHHHHHHH
Confidence 356889999999999999999999999987888899999999999999999999999999887643 35789999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 100 ~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 100 RKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 99999999999999999999999988 8999999999999999999999999998863
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-21 Score=180.97 Aligned_cols=147 Identities=21% Similarity=0.327 Sum_probs=123.9
Q ss_pred HHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHH-HHHHhCCCCCHHHHHHHHHhc---------CCCCCceeeehh
Q 009091 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKT-GLARLGSKLSETEVKQLMDAA---------DVDGNGTIDYIE 457 (544)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~-~l~~~~~~~~~~~~~~~~~~~---------D~d~dg~i~~~e 457 (544)
..+...++++++++++++|..+|.|++|.|+.+||.. +++.++..++..++..++..+ |.|++|.|+|+|
T Consensus 39 ~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~E 118 (226)
T 2lvv_A 39 CAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVE 118 (226)
T ss_dssp HHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBC
T ss_pred HHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHH
Confidence 3445678899999999999999999999999999998 555568777766766666666 999999999999
Q ss_pred hhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 458 FISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 458 F~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
|+.++...........++.+|+.||+|++|+|+.+||+.+|..+ |... .+++.+|..+|.|+||.|+|+||+.+|.
T Consensus 119 F~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~-~e~~~~~~~~D~d~dG~Is~~EF~~~~~ 197 (226)
T 2lvv_A 119 FLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDI-TDATTVFNEIDTNGSGVVTFDEFSCWAV 197 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCC-CSCHHHHHHHCCSCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCH-HHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 99864433333345689999999999999999999999999887 6652 3589999999999999999999999996
Q ss_pred c
Q 009091 535 S 535 (544)
Q Consensus 535 ~ 535 (544)
.
T Consensus 198 ~ 198 (226)
T 2lvv_A 198 T 198 (226)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-20 Score=168.24 Aligned_cols=132 Identities=23% Similarity=0.416 Sum_probs=121.1
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC-CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHH
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~ 476 (544)
+.++++++|..+|.|++|+|+.+||..++..++ ..++..++..+|..+|.|++|.|+|+||+..+.. ...++.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~------~~~~~~ 78 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQN 78 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH------HHHHHH
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHH
Confidence 446789999999999999999999999999988 7789999999999999999999999999876542 357899
Q ss_pred HHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 79 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 138 (172)
T 2znd_A 79 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 138 (172)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999999999988 8999999999999999999999999988763
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=168.66 Aligned_cols=138 Identities=25% Similarity=0.371 Sum_probs=120.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC----CCCCHHH-H--------HHHHHhcCCCCCceeeehhhhhh
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG----SKLSETE-V--------KQLMDAADVDGNGTIDYIEFISA 461 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~----~~~~~~~-~--------~~~~~~~D~d~dg~i~~~eF~~~ 461 (544)
+++++++++++|..+|.|++|+|+.+||..++..++ ..++..+ + ..+|..+| ++|.|+|+||+..
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence 356788999999999999999999999999999988 8888877 6 46788888 8999999999987
Q ss_pred hhcccc-----ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 462 TMHRYR-----LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 462 ~~~~~~-----~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+..... ......++.+|+.+|+|++|+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~-~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTC-CGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCC-CHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 765433 122467899999999999999999999999999974 6778999999999999999999999998864
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-22 Score=195.78 Aligned_cols=201 Identities=19% Similarity=0.365 Sum_probs=153.0
Q ss_pred CCCHHHHHHHHHhc---ccCcCCCCChhhhhCC------CccccCCCCC--------------------CC---cccHHH
Q 009091 322 LISDSAKDLVRKML---IQDPKKRITSAEVLEH------PWMREGGEAS--------------------DK---PIGSAV 369 (544)
Q Consensus 322 ~~~~~~~~li~~~l---~~dp~~Rps~~ell~h------p~f~~~~~~~--------------------~~---~~~~~~ 369 (544)
.++.++.+|.++.. ..+|.+|.+.++.+.| +|+++..... .. .....+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~v 95 (323)
T 1ij5_A 16 KVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASL 95 (323)
T ss_dssp HHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHH
Confidence 35678889999988 8899999999999998 9988762211 00 001112
Q ss_pred HHHHH-HHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC
Q 009091 370 LSRMK-QFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD 448 (544)
Q Consensus 370 ~~~l~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d 448 (544)
+.++. +|...+.++. +...++..++..+..+|..||.|++|.|+.+||..+|..+|..++..++..+|..+|.|
T Consensus 96 l~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 96 LKDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC
Confidence 22222 2333333333 34578999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHH-HHHHhCCCCCcceeH
Q 009091 449 GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE-IISEVDTDNDGRINY 526 (544)
Q Consensus 449 ~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~-~~~~~d~~~dg~i~~ 526 (544)
++|.|+|.+|+..+ .....+..+|+.+|.|++|+|+.+||..+| +|.. ++.++.. +|..+|.|+||.|+|
T Consensus 171 ~~G~I~f~ef~~l~------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~ 242 (323)
T 1ij5_A 171 TKGRMSYITLVAVA------NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGF 242 (323)
T ss_dssp CSSTHHHHHHTTSH------HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEH
T ss_pred CCCcCcHHHHHhhh------hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeH
Confidence 99999999997643 234456779999999999999999999999 6666 7788999 999999999999999
Q ss_pred HHHHHHHhc
Q 009091 527 EEFCTMMRS 535 (544)
Q Consensus 527 ~eF~~~~~~ 535 (544)
+||+.+|..
T Consensus 243 ~EF~~~l~~ 251 (323)
T 1ij5_A 243 SEYVHLGLC 251 (323)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-21 Score=180.35 Aligned_cols=147 Identities=18% Similarity=0.357 Sum_probs=124.0
Q ss_pred HHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHH-hCCCCCHHHHHHHHHhc---------CCCCCceeeehhh
Q 009091 389 VIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-LGSKLSETEVKQLMDAA---------DVDGNGTIDYIEF 458 (544)
Q Consensus 389 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~---------D~d~dg~i~~~eF 458 (544)
.+...+++++++++.++|..+|.|++|+|+.+||..++.. +|..++..++..++..+ |.|++|.|+|.||
T Consensus 37 ~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF 116 (219)
T 3cs1_A 37 AIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEF 116 (219)
T ss_dssp HSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCH
T ss_pred HhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHH
Confidence 3445688899999999999999999999999999999998 78777766665554422 3488999999999
Q ss_pred hhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-G-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.++.........+.++.+|+.||.|++|+|+.+||+.+|..+|. . ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 117 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 195 (219)
T 3cs1_A 117 LEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA 195 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 987643333334567999999999999999999999999998875 4 6678999999999999999999999999875
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.83 E-value=8.7e-21 Score=171.84 Aligned_cols=142 Identities=13% Similarity=0.270 Sum_probs=124.8
Q ss_pred hhHHHHhhHHHHhccc-CCCCCCccCHHHHHHHHHHhC----CCCCHHHHHHH-----------HHhcCCCCCceeeehh
Q 009091 394 LSEEEIKGLKTMFANM-DTDKSGTITYEELKTGLARLG----SKLSETEVKQL-----------MDAADVDGNGTIDYIE 457 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~-D~~~~G~I~~~e~~~~l~~~~----~~~~~~~~~~~-----------~~~~D~d~dg~i~~~e 457 (544)
+++.++++++++|..+ |.|++|.|+.+||..++..++ ..++..++..+ |+.+|.|++|.|+++|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 5677888999999999 999999999999999999988 78888888755 9999999999999999
Q ss_pred hhhhhhcccc---------ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHH
Q 009091 458 FISATMHRYR---------LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528 (544)
Q Consensus 458 F~~~~~~~~~---------~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~e 528 (544)
|+..+..... ......++.+|+.+|.|+||+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+|
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~-~~~~~~~~~~~~D~d~dG~i~~~e 160 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC-CCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCC-CHHHHHHHHHHhcCCCCCcCcHHH
Confidence 9887754321 123467899999999999999999999999998884 567899999999999999999999
Q ss_pred HHHHHhcC
Q 009091 529 FCTMMRSG 536 (544)
Q Consensus 529 F~~~~~~~ 536 (544)
|+.++..-
T Consensus 161 f~~~~~~~ 168 (185)
T 2sas_A 161 YKELYYRL 168 (185)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988753
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=170.45 Aligned_cols=142 Identities=25% Similarity=0.383 Sum_probs=125.9
Q ss_pred HHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHH
Q 009091 396 EEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHL 474 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~ 474 (544)
.-..++++++|..||.+ ++|.|+.+||..++..++...+..++..+|..+|.|++|.|+|+||+..+.........+.+
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 34556678899999999 89999999999999999988899999999999999999999999999888665555667889
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHHc----C------------C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 475 YKAFQYFDKDNSGYITRDELETAMKDY----G------------I--GDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 475 ~~~F~~~D~d~dG~Is~~el~~~l~~~----g------------~--~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|+.+|.|++|+|+.+||+.++..+ | . ..+++++.+|..+|.|+||.|+|+||+.++.+.
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~ 177 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD 177 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC
Confidence 999999999999999999999999876 3 1 245789999999999999999999999999865
Q ss_pred C
Q 009091 537 T 537 (544)
Q Consensus 537 ~ 537 (544)
+
T Consensus 178 ~ 178 (204)
T 1jba_A 178 K 178 (204)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-20 Score=160.67 Aligned_cols=129 Identities=26% Similarity=0.439 Sum_probs=115.6
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh---ccccccchHHHHHHH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM---HRYRLERDEHLYKAF 478 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~---~~~~~~~~~~~~~~F 478 (544)
+.++|..+|.|++|+|+.+||..++..++..++..++..+|+.+|.|++|.|+++||...+. ..........++.+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999998774 222233455699999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
+.+|.|++|+|+.+||+.++..+|.. . +..+|..+|.|+||.|+|+||+++|
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~~~--~-~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKHGIE--K-VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTTCH--H-HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHCCCCCCccCHHHHHHHHHHhCHH--H-HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 99999999999999999999987642 2 8999999999999999999999886
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-20 Score=167.11 Aligned_cols=130 Identities=21% Similarity=0.370 Sum_probs=120.2
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHh-C-------CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccccc
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARL-G-------SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE 469 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~-~-------~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~ 469 (544)
++++++++|..+| |++|.|+.+||..++..+ | ..++..++..+|..+|.|++|.|+|+||+..+..
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~----- 75 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN----- 75 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-----
Confidence 5678999999999 999999999999999997 6 6788999999999999999999999999877653
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.++..+| |+||.|+|+||+.++..
T Consensus 76 -~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 76 -IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp -HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 3678999999999999999999999999999988 8999999999999 99999999999988763
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=160.43 Aligned_cols=134 Identities=17% Similarity=0.340 Sum_probs=121.7
Q ss_pred HHHHhhHHHHhcccCCCC-CCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccchHH
Q 009091 396 EEEIKGLKTMFANMDTDK-SGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLERDEH 473 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~~~~ 473 (544)
-+++++++++|..+|.|+ +|.|+.+||..++..+|..++..++..++..+|.+ |+|+||+..+.... .......
T Consensus 10 ~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~ 85 (146)
T 2qac_A 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEE 85 (146)
T ss_dssp HHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHH
T ss_pred HHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHH
Confidence 356678999999999999 99999999999999999999999999999999887 99999998876432 2345678
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+ |+||.|+|+||+.+|.+
T Consensus 86 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~~ 146 (146)
T 2qac_A 86 LIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDILQ 146 (146)
T ss_dssp HHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHhC
Confidence 9999999999999999999999999999987 899999999999 99999999999998863
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=171.82 Aligned_cols=142 Identities=24% Similarity=0.446 Sum_probs=123.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc---
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL--- 468 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~--- 468 (544)
..++++++++++++|..+|.|++|+|+.+||..++ .++..++. ..+|+.+|.|++|.|+|+||+..+......
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 46889999999999999999999999999999864 67766654 467889999999999999999887654321
Q ss_pred -------------cchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CCC-CHHHHHHH----HHHhCCCCCcceeHHHH
Q 009091 469 -------------ERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GIG-DEASIKEI----ISEVDTDNDGRINYEEF 529 (544)
Q Consensus 469 -------------~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~~-~~~~~~~~----~~~~d~~~dg~i~~~eF 529 (544)
...+.++.+|+.+|+|++|+|+.+||+.+|..+ |.. ++++++.+ |..+|.|+||.|+|+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 156789999999999999999999999999986 877 88888887 99999999999999999
Q ss_pred HHHHhcCC
Q 009091 530 CTMMRSGT 537 (544)
Q Consensus 530 ~~~~~~~~ 537 (544)
+.+|....
T Consensus 177 ~~~~~~~~ 184 (208)
T 2ct9_A 177 VKVLEKVD 184 (208)
T ss_dssp HHTTTTSC
T ss_pred HHHHhccC
Confidence 99887653
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=163.66 Aligned_cols=144 Identities=22% Similarity=0.355 Sum_probs=124.4
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
..++.++++++.+.|..+ |++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|.||+..+........
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence 457888877777777665 689999999999999999866 78999999999999999999999999988765544556
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CCC---------CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDY----GIG---------DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~~---------~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.+|.|++|+|+.+||+.++..+ |.. .+++++.+|+.+|.|+||.|+|+||+.+|.+.+
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~ 170 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDD 170 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcCh
Confidence 6789999999999999999999999999876 531 248899999999999999999999999987654
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=167.79 Aligned_cols=145 Identities=24% Similarity=0.409 Sum_probs=124.0
Q ss_pred hhhHHHHhhHHHHhcccCCC--CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-cc
Q 009091 393 ALSEEEIKGLKTMFANMDTD--KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~ 469 (544)
.|+.++++++.++|..+|.| ++|.|+.+||..++.. ........+..+|..+|.|++|.|+|.||+..+..... ..
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 108 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP 108 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence 68899999999999999999 9999999999999987 33344556788999999999999999999988765442 34
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHH----HcCCC-CHHHHHH----HHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMK----DYGIG-DEASIKE----IISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~----~~g~~-~~~~~~~----~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
..+.++.+|+.+|.|++|+|+.+||+.++. ..|.. ++++++. +|..+|.|+||.|+|+||+.+|.+.+.
T Consensus 109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 186 (207)
T 2ehb_A 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPS 186 (207)
T ss_dssp HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChH
Confidence 567899999999999999999999999985 45766 7766655 456999999999999999999987654
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-20 Score=164.58 Aligned_cols=147 Identities=16% Similarity=0.218 Sum_probs=120.9
Q ss_pred HHHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcC---CCCCceeeehhhhhhhh
Q 009091 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD---VDGNGTIDYIEFISATM 463 (544)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D---~d~dg~i~~~eF~~~~~ 463 (544)
+.++....+..++.++++.|..|| ++|+|+.+||..+ +|..++..++..+|..+| .+++|.|+|.||..++.
T Consensus 15 l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~---lg~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~ 89 (179)
T 3a8r_A 15 LQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKC---IGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYE 89 (179)
T ss_dssp HHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHH---HTCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHH
T ss_pred HHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHH---HCCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHH
Confidence 334554445466788999999999 8999999999985 477778888999999887 46789999999988765
Q ss_pred ccccccchHHHHHHHhhhccCCCCcccHHHHHHHHH-HcCCC--------CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK-DYGIG--------DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 464 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~-~~g~~--------~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
........+.++.+|+.||+|+||+|+.+||+.+|. .+|.. ++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus 90 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 169 (179)
T 3a8r_A 90 QLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLL 169 (179)
T ss_dssp HHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC
T ss_pred HHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 433334567899999999999999999999999998 77765 678899999999999999999999999998
Q ss_pred cCCC
Q 009091 535 SGTP 538 (544)
Q Consensus 535 ~~~~ 538 (544)
..+.
T Consensus 170 ~~p~ 173 (179)
T 3a8r_A 170 QSPS 173 (179)
T ss_dssp ----
T ss_pred hCcc
Confidence 7654
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=170.63 Aligned_cols=145 Identities=26% Similarity=0.441 Sum_probs=124.2
Q ss_pred hhhHHHHhhHHHHhcccCCC--CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-ccc
Q 009091 393 ALSEEEIKGLKTMFANMDTD--KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~ 469 (544)
.|+.++++++.++|..+|.| ++|.|+.+||..++.. ........+..+|..+|.|++|.|+|+||+..+.... ...
T Consensus 41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 119 (226)
T 2zfd_A 41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP 119 (226)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence 68999999999999999999 9999999999999987 3334445678899999999999999999998876543 234
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHH----HcCCC-CHHHHHHH----HHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMK----DYGIG-DEASIKEI----ISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~----~~g~~-~~~~~~~~----~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
..+.++.+|+.+|.|++|+|+.+||+.++. ..|.. ++++++.+ |..+|.|+||.|+|+||+.+|.+.+.
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~ 197 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 197 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChH
Confidence 567899999999999999999999999995 56766 77776554 56999999999999999999987654
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=163.76 Aligned_cols=141 Identities=28% Similarity=0.430 Sum_probs=122.1
Q ss_pred hhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 394 LSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
++..+ +.++|..||.+ ++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|++.||...+.........
T Consensus 22 ~~~~e---l~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~ 98 (190)
T 2l2e_A 22 FDKKE---LQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELN 98 (190)
T ss_dssp SCSHH---HHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSH
T ss_pred CCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHH
Confidence 45444 66678899999 89999999999999998654 556789999999999999999999999888665555667
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHc----C--------CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDY----G--------IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g--------~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
+.++.+|+.+|.|++|+|+.+||+.++..+ | .. .+++++.+|..+|.|+||.|+|+||+.++.+.+
T Consensus 99 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 2l2e_A 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP 177 (190)
T ss_dssp HHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT
T ss_pred HHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence 889999999999999999999999999772 2 22 678999999999999999999999999998754
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.80 E-value=8.5e-20 Score=167.58 Aligned_cols=133 Identities=20% Similarity=0.337 Sum_probs=121.7
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCC-----CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-----KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL 468 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~ 468 (544)
++..+++++++ |..+|.|++|.|+.+||..++..++. .++..++..+|+.+|.|++|.|+|+||+..+..
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~---- 101 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV---- 101 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH----
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHH----
Confidence 55567788999 99999999999999999999999986 578999999999999999999999999887653
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.++..+ |+||.|+|+||+.++..
T Consensus 102 --~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~ 165 (198)
T 1juo_A 102 --LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK 165 (198)
T ss_dssp --HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred --HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 3678999999999999999999999999999988 899999999999 89999999999988753
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=169.64 Aligned_cols=144 Identities=25% Similarity=0.375 Sum_probs=123.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
..|+.++++.+.+.|.. .+++|.|+.+||..++..+ +...+...+..+|+.+|.|++|.|+|+||+..+........
T Consensus 59 ~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 136 (229)
T 3dd4_A 59 SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV 136 (229)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh
Confidence 35788888888888876 4688999999999999995 44566778899999999999999999999988776555556
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHc------------CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDY------------GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~------------g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.||+|+||+|+.+||..++..+ +.. .+++++.+|..+|.|+||.|+|+||+.++.+.+
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 216 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDE 216 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCH
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCH
Confidence 7889999999999999999999999999876 334 667899999999999999999999999998653
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.2e-20 Score=165.07 Aligned_cols=141 Identities=21% Similarity=0.316 Sum_probs=122.5
Q ss_pred hhhHHHHhhHHHHhcccCC-----CC-C--CccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCce-eeehhhhhhhh
Q 009091 393 ALSEEEIKGLKTMFANMDT-----DK-S--GTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT-IDYIEFISATM 463 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~-----~~-~--G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~-i~~~eF~~~~~ 463 (544)
.|+.++++++.++|..+|. |+ + |.|+.+||.. +..+|..++.. .+|..+|.|++|. |+|.||+..+.
T Consensus 13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~~ 88 (183)
T 1dgu_A 13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLLS 88 (183)
T ss_dssp SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHHH
Confidence 5788999999999999999 68 8 9999999999 88888887764 5777889999999 99999998876
Q ss_pred ccccc-cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-----C-CHHHHHH----HHHHhCCCCCcceeHHHHHHH
Q 009091 464 HRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-----G-DEASIKE----IISEVDTDNDGRINYEEFCTM 532 (544)
Q Consensus 464 ~~~~~-~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-----~-~~~~~~~----~~~~~d~~~dg~i~~~eF~~~ 532 (544)
..... ...+.++.+|+.||.|++|+|+.+||+.++..+|. . ++++++. +|..+|.|+||.|+|+||+.+
T Consensus 89 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 168 (183)
T 1dgu_A 89 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHV 168 (183)
T ss_dssp HHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 54332 33468999999999999999999999999999876 3 6677775 999999999999999999999
Q ss_pred HhcCC
Q 009091 533 MRSGT 537 (544)
Q Consensus 533 ~~~~~ 537 (544)
|.+.+
T Consensus 169 ~~~~~ 173 (183)
T 1dgu_A 169 ISRSP 173 (183)
T ss_dssp HCSSC
T ss_pred HHhCh
Confidence 88754
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=167.04 Aligned_cols=138 Identities=24% Similarity=0.369 Sum_probs=119.6
Q ss_pred HhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCCCCH-HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHH
Q 009091 399 IKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSE-TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476 (544)
Q Consensus 399 ~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~ 476 (544)
.+++..+|..||.+ ++|.|+.+||..++..++...+. .++..+|..+|.|++|.|+|.||+..+...........++.
T Consensus 13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~ 92 (198)
T 2r2i_A 13 ATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW 92 (198)
T ss_dssp TSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHH
Confidence 34577889999988 89999999999999988876554 45999999999999999999999988765554556778999
Q ss_pred HHhhhccCCCCcccHHHHHHHHHHcC------CC-C-HHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 477 AFQYFDKDNSGYITRDELETAMKDYG------IG-D-EASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~~~g------~~-~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+|+.+|.|++|+|+.+||+.++..++ .. + ++.++.+|..+|.|+||.|+|+||+.++.+.
T Consensus 93 ~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 160 (198)
T 2r2i_A 93 YFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKD 160 (198)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTC
T ss_pred HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 99999999999999999999999875 33 4 4558999999999999999999999998753
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-19 Score=159.83 Aligned_cols=119 Identities=19% Similarity=0.266 Sum_probs=107.0
Q ss_pred cCCCCCCccCHHHHHHHHHHh------CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhc
Q 009091 409 MDTDKSGTITYEELKTGLARL------GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482 (544)
Q Consensus 409 ~D~~~~G~I~~~e~~~~l~~~------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D 482 (544)
=+.|++|+|+.+||..+|+.+ +..++..++..+|..+|.|++|.|+|+||+..+.. ...++.+|+.||
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~------~~~l~~aF~~fD 86 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKR------LVHYQHVFQKVQ 86 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHH------HHHHHHHHHHHC
T ss_pred ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH------HHHHHHHHHHhc
Confidence 367899999999999999998 66889999999999999999999999999876643 257899999999
Q ss_pred cCCCCcccHHHHHHHHHHc----CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 483 KDNSGYITRDELETAMKDY----GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 483 ~d~dG~Is~~el~~~l~~~----g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
|++|+|+.+||+.+|..+ |.. ++++++.++..+| |+||.|+|+||+.+|..
T Consensus 87 -d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 87 -TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp -SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred -CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 999999999999999999 887 8899999999999 99999999999988764
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-20 Score=168.72 Aligned_cols=144 Identities=14% Similarity=0.232 Sum_probs=122.2
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh------CCCCCHHHHHHH---------HHhcCCCCCceeee
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL------GSKLSETEVKQL---------MDAADVDGNGTIDY 455 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~------~~~~~~~~~~~~---------~~~~D~d~dg~i~~ 455 (544)
...++++++++++++|..+|.|++|+|+.+||..++..+ |..++..++..+ |+.+|.|++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 345788899999999999999999999999999999877 777888888888 59999999999999
Q ss_pred hhhhhhhhcccc-ccchHHHHHHH--hhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHH
Q 009091 456 IEFISATMHRYR-LERDEHLYKAF--QYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531 (544)
Q Consensus 456 ~eF~~~~~~~~~-~~~~~~~~~~F--~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~ 531 (544)
+| ..+..... ....+.+..+| +.||.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.
T Consensus 85 ~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~ 162 (186)
T 2hps_A 85 AT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162 (186)
T ss_dssp HH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence 99 33322211 11223455666 88899999999999999999999977 899999999999999999999999999
Q ss_pred HHhcC
Q 009091 532 MMRSG 536 (544)
Q Consensus 532 ~~~~~ 536 (544)
+|...
T Consensus 163 ~~~~~ 167 (186)
T 2hps_A 163 TVNDF 167 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.3e-19 Score=157.50 Aligned_cols=124 Identities=20% Similarity=0.343 Sum_probs=114.0
Q ss_pred HHhcccCCCCCCccCHHHHHHHHHHhCC-----CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHH
Q 009091 404 TMFANMDTDKSGTITYEELKTGLARLGS-----KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478 (544)
Q Consensus 404 ~~F~~~D~~~~G~I~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F 478 (544)
+.|..+|.|++|.|+.+||..++..++. .++..++..+|..+|.|++|.|+|+||+..+.. ...++.+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~------~~~~~~~F 78 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV------LNGWRQHF 78 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH------HHHHHHHH
Confidence 4588999999999999999999999987 678999999999999999999999999886643 26789999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+|.|++|+|+.+||+.+|..+|.. ++++++.++..+ |+||.|+|+||+.++..
T Consensus 79 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 134 (167)
T 1gjy_A 79 ISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK 134 (167)
T ss_dssp HHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence 99999999999999999999999987 899999999999 89999999999988753
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-19 Score=168.65 Aligned_cols=138 Identities=24% Similarity=0.375 Sum_probs=116.7
Q ss_pred hhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCCCCH-HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHH
Q 009091 400 KGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSE-TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKA 477 (544)
Q Consensus 400 ~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~ 477 (544)
+++.++|..||.+ ++|.|+.+||..++..++..... .++..+|+.+|.|++|.|+|.||+..+.........+.++.+
T Consensus 19 ~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~ 98 (211)
T 2ggz_A 19 QETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWY 98 (211)
T ss_dssp -----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHH
Confidence 4467889999998 89999999999999988876543 559999999999999999999999887655445567789999
Q ss_pred HhhhccCCCCcccHHHHHHHHHHcC-----CC-CH-HHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 478 FQYFDKDNSGYITRDELETAMKDYG-----IG-DE-ASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 478 F~~~D~d~dG~Is~~el~~~l~~~g-----~~-~~-~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
|+.+|.|++|+|+.+||+.++..++ .. +. +.++.+|..+|.|+||.|+|+||+.+|.+.+
T Consensus 99 F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 165 (211)
T 2ggz_A 99 FKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQ 165 (211)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTT
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCH
Confidence 9999999999999999999999875 44 44 5589999999999999999999999998643
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.4e-19 Score=165.38 Aligned_cols=143 Identities=22% Similarity=0.352 Sum_probs=123.1
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
.++.++++++.+.|... +++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|+||+..+.........
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~ 124 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH 124 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHH
Confidence 47888877776666654 489999999999999998764 788999999999999999999999999887655445567
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHc----CCC---------CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDY----GIG---------DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~~---------~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
+.++.+|+.+|.|++|+|+.+||+.++..+ |.. .+++++.+|+.+|.|+||.|+|+||+.++.+.+
T Consensus 125 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 203 (224)
T 1s1e_A 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 203 (224)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence 789999999999999999999999999876 531 247899999999999999999999999998753
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-19 Score=157.36 Aligned_cols=124 Identities=19% Similarity=0.325 Sum_probs=114.3
Q ss_pred HHhcccCCCCCCccCHHHHHHHHHHhCC-----CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHH
Q 009091 404 TMFANMDTDKSGTITYEELKTGLARLGS-----KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478 (544)
Q Consensus 404 ~~F~~~D~~~~G~I~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F 478 (544)
+.|..+|.|++|.|+.+||..++..+|. .++..++..+|+.+|.|++|.|+|+||+..+.. ...++.+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~------~~~~~~~F 76 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKENF 76 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHHHH
Confidence 4588999999999999999999999987 678999999999999999999999999876643 36789999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+|+|++|+|+.+||+.+|..+|.. ++++++.++..+ |+||.|+|+||+.++..
T Consensus 77 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 77 MTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 99999999999999999999999988 899999999999 89999999999988763
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-19 Score=162.21 Aligned_cols=142 Identities=25% Similarity=0.388 Sum_probs=119.6
Q ss_pred hhhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 393 ALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
.++.++ +..+|..||.+ ++|.|+.+||..++..+ +......++..+|+.+|.|++|.|++.||+..+........
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1g8i_A 21 YFTEKE---VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 97 (190)
T ss_dssp SSCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred CCCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCH
Confidence 455555 55567777776 89999999999999998 33456788999999999999999999999988765544456
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHc----C--------CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDY----G--------IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g--------~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.+|.|++|+|+.+||+.++..+ | .. ++++++.+|..+|.|+||.|+|+||+.++.+.+
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~ 177 (190)
T 1g8i_A 98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADP 177 (190)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCH
T ss_pred HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCh
Confidence 7789999999999999999999999999872 3 22 577899999999999999999999999998753
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-19 Score=165.26 Aligned_cols=141 Identities=21% Similarity=0.300 Sum_probs=121.0
Q ss_pred hhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 394 LSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
++..+ +..+|..||.+ ++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+++||+..+.........
T Consensus 30 ~~~~~---i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~ 106 (207)
T 2d8n_A 30 FSEEE---LCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTN 106 (207)
T ss_dssp CCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSS
T ss_pred CCHHH---HHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHH
Confidence 45554 55667777877 79999999999999998764 788899999999999999999999999887655444566
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHc----C----CC-C------HHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDY----G----IG-D------EASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g----~~-~------~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.++.+|+.+|.|++|+|+.+||+.++..+ | .. + +++++.+|..+|.|+||.|+|+||+.++.+.
T Consensus 107 ~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 107 QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC
Confidence 789999999999999999999999999886 6 22 2 3679999999999999999999999999865
Q ss_pred C
Q 009091 537 T 537 (544)
Q Consensus 537 ~ 537 (544)
+
T Consensus 187 ~ 187 (207)
T 2d8n_A 187 K 187 (207)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-19 Score=168.94 Aligned_cols=142 Identities=20% Similarity=0.312 Sum_probs=121.7
Q ss_pred hhhhHHHHhhHHHHhcccCC-----CC-C--CccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCce-eeehhhhhhh
Q 009091 392 EALSEEEIKGLKTMFANMDT-----DK-S--GTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT-IDYIEFISAT 462 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~-----~~-~--G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~-i~~~eF~~~~ 462 (544)
..|+..+++++.+.|..+|. |+ + |.|+.+||.. +..++..++.. .+|+.+|.|++|. |+|+||+..+
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~ 118 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 118 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH---HHHHHhCcCCCCCEecHHHHHHHH
Confidence 46899999999999999998 66 6 9999999999 88888877654 5788899999999 9999999887
Q ss_pred hccccc-cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-----C-CHHHHH----HHHHHhCCCCCcceeHHHHHH
Q 009091 463 MHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-----G-DEASIK----EIISEVDTDNDGRINYEEFCT 531 (544)
Q Consensus 463 ~~~~~~-~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-----~-~~~~~~----~~~~~~d~~~dg~i~~~eF~~ 531 (544)
...... ...+.++.+|+.||.|++|+|+.+||+.+|..++. . ++++++ .+|..+|.|+||.|+|+||+.
T Consensus 119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~ 198 (214)
T 2l4h_A 119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198 (214)
T ss_dssp HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 654433 34568999999999999999999999999988754 3 555555 499999999999999999999
Q ss_pred HHhcCC
Q 009091 532 MMRSGT 537 (544)
Q Consensus 532 ~~~~~~ 537 (544)
++.+.+
T Consensus 199 ~~~~~p 204 (214)
T 2l4h_A 199 VISRSP 204 (214)
T ss_dssp HHHTCH
T ss_pred HHHhCh
Confidence 998753
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=155.80 Aligned_cols=143 Identities=27% Similarity=0.378 Sum_probs=120.2
Q ss_pred hhhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCC-CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 393 ALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGS-KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
.++.+++++ +|..||.+ ++|.|+.+||..++..++. ..+..++..+|..+|.|++|.|++.||...+........
T Consensus 21 ~~~~~~i~~---~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 21 YFDRREIQQ---WHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CSTHHHHHH---HHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCCHHHHHH---HHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence 466666555 45555555 8999999999999999853 345678999999999999999999999988765554556
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHH----cCC--------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKD----YGI--------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~----~g~--------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.+|.|++|+|+.+||..++.. +|. . .+++++.+|..+|.|+||.|+++||+.++.+.+
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 1fpw_A 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP 177 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 788999999999999999999999999987 342 2 567899999999999999999999999998765
Q ss_pred C
Q 009091 538 P 538 (544)
Q Consensus 538 ~ 538 (544)
.
T Consensus 178 ~ 178 (190)
T 1fpw_A 178 S 178 (190)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-19 Score=170.98 Aligned_cols=144 Identities=23% Similarity=0.392 Sum_probs=126.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCH------HHHHHHHHhcCCCCCceeeehhhhhhhhcc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE------TEVKQLMDAADVDGNGTIDYIEFISATMHR 465 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~------~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 465 (544)
..+++.++++++++|..+|.|++|.|+.+||..++..++..++. .++..+|..+|.|++|.|+|+||+..+...
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 8 LQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 35777788889999999999999999999999999998765554 789999999999999999999999877542
Q ss_pred ---------ccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CCC-CHHHHHH----HHHHhCCCCCcceeHH
Q 009091 466 ---------YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY----GIG-DEASIKE----IISEVDTDNDGRINYE 527 (544)
Q Consensus 466 ---------~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~~-~~~~~~~----~~~~~d~~~dg~i~~~ 527 (544)
........++.+|+.+|.|++|+|+.+||+.+|..+ |.. ++.++.. ++..+|.|+||.|+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ 167 (263)
T 2f33_A 88 ENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167 (263)
T ss_dssp TTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHH
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 234456789999999999999999999999999988 777 7777776 9999999999999999
Q ss_pred HHHHHHhc
Q 009091 528 EFCTMMRS 535 (544)
Q Consensus 528 eF~~~~~~ 535 (544)
||+.++..
T Consensus 168 ef~~~~~~ 175 (263)
T 2f33_A 168 EMARLLPV 175 (263)
T ss_dssp HHHHHSCT
T ss_pred HHHHHHHH
Confidence 99988753
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.1e-19 Score=168.43 Aligned_cols=138 Identities=23% Similarity=0.400 Sum_probs=121.9
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHh----CCCCCHHHHHH----HHHhcCCCCCceeeehhhhhhhhcc-----
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARL----GSKLSETEVKQ----LMDAADVDGNGTIDYIEFISATMHR----- 465 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~~----- 465 (544)
.+++..+|..+|.|++|+|+.+||..++..+ |..++..++.. +|..+|.|++|.|+|+||+..+...
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~ 181 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL 181 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence 3568899999999999999999999999998 88899988877 9999999999999999998876531
Q ss_pred ---ccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC----C-CHHHHHHHHHH-hCCCCCcceeHHHHHHHHhcC
Q 009091 466 ---YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI----G-DEASIKEIISE-VDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 466 ---~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~----~-~~~~~~~~~~~-~d~~~dg~i~~~eF~~~~~~~ 536 (544)
........++.+|+.+|+|++|+|+.+||+.++..++. . ++++++.++.. +|.|+||.|+|+||+.+|.+.
T Consensus 182 ~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 261 (263)
T 2f33_A 182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261 (263)
T ss_dssp HHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCCS
T ss_pred HhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhcc
Confidence 12345678999999999999999999999999988875 4 77889999987 799999999999999999875
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=158.51 Aligned_cols=141 Identities=27% Similarity=0.433 Sum_probs=119.1
Q ss_pred hhhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCCC-CHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 393 ALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKL-SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~-~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
.++.++ +..+|..||.+ ++|.|+.+||..++..++... ...++..+|..+|.|++|.|+|.||...+........
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 97 (193)
T 1bjf_A 21 DFTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 97 (193)
T ss_dssp SCCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred CCCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCH
Confidence 466665 45667788887 899999999999999987654 4677899999999999999999999988765544556
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CC--C-C------HHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDY----GI--G-D------EASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~--~-~------~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
...++.+|+.+|.|++|+|+.+||..++..+ |. . + ++.+..+|..+|.|+||.|+++||+.++...
T Consensus 98 ~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 176 (193)
T 1bjf_A 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD 176 (193)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcC
Confidence 7789999999999999999999999999773 41 1 2 3568999999999999999999999998754
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-18 Score=167.82 Aligned_cols=139 Identities=21% Similarity=0.359 Sum_probs=119.8
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHh----CCCCCHHHHHH----HHHhcCCCCCceeeehhhhhhhhcc-----
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARL----GSKLSETEVKQ----LMDAADVDGNGTIDYIEFISATMHR----- 465 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~~----- 465 (544)
.+++..+|..+|.|++|+|+.+||..++..+ |..++..++.. +|..+|.|++|.|+|+||+..+...
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 3458899999999999999999999999998 88888888754 9999999999999999999877531
Q ss_pred -------ccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC----C-CHHHHHH----HHHHhCCCCCcceeHHHH
Q 009091 466 -------YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI----G-DEASIKE----IISEVDTDNDGRINYEEF 529 (544)
Q Consensus 466 -------~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~----~-~~~~~~~----~~~~~d~~~dg~i~~~eF 529 (544)
......+.++.+|+.+|+|++|+|+.+||+.++..++. . ++++++. +|..+|.|+||.|+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF 262 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 11133467899999999999999999999999988765 4 7777776 999999999999999999
Q ss_pred HHHHhcCC
Q 009091 530 CTMMRSGT 537 (544)
Q Consensus 530 ~~~~~~~~ 537 (544)
+.+|...+
T Consensus 263 ~~~~~~~p 270 (272)
T 2be4_A 263 ALCLGLKH 270 (272)
T ss_dssp HHHTTCCC
T ss_pred HHHHccCC
Confidence 99987653
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.4e-18 Score=162.09 Aligned_cols=144 Identities=24% Similarity=0.367 Sum_probs=123.3
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC-CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
.++.++++++.+.|... +++|.|+.+||..++..++ ...+..++..+|..+|.|++|.|+|+||+..+.........
T Consensus 87 ~~s~~ei~~l~~~fd~~--~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~ 164 (256)
T 2jul_A 87 KFTKKELQSLYRGFKNE--CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH 164 (256)
T ss_dssp TSCHHHHHHHHHHHHHH--CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence 57878877766655532 4799999999999999986 55778899999999999999999999999887665455567
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHc----C--------CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDY----G--------IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g--------~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
+.++.+|+.+|.|++|+|+.+||..++..+ | .. .+++++.+|..+|.|+||.|+|+||+.++.+.+.
T Consensus 165 ~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~ 244 (256)
T 2jul_A 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDEN 244 (256)
T ss_dssp HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHH
Confidence 889999999999999999999999999876 5 22 5788999999999999999999999999987543
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-18 Score=171.36 Aligned_cols=132 Identities=20% Similarity=0.375 Sum_probs=120.2
Q ss_pred HHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHH-HHHhcCCCCCceeeehhhhhhhhccccccchHHHH
Q 009091 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQ-LMDAADVDGNGTIDYIEFISATMHRYRLERDEHLY 475 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~-~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~ 475 (544)
.....+..+|..+|.|++|+|+.+||..++ +|..++..++.. +|..+|.|++|.|+|.||+..+.... .+.
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~ 256 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR 256 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence 345668889999999999999999999999 788888999999 99999999999999999988775432 788
Q ss_pred HHHhhhccCCCCcccHHHHHHHH-HHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 476 KAFQYFDKDNSGYITRDELETAM-KDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 476 ~~F~~~D~d~dG~Is~~el~~~l-~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.+|+.||.|++|+|+.+||+.+| ..+|.. ++++++.+|..+|.|+||.|+|+||+.+|..-
T Consensus 257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~ 319 (323)
T 1ij5_A 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLM 319 (323)
T ss_dssp HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999999999999999 999977 77889999999999999999999999998753
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.1e-18 Score=168.71 Aligned_cols=142 Identities=16% Similarity=0.224 Sum_probs=102.2
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC-----------hhcH--------HHHHHHHHHHHhccCCCC
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN-----------KQDR--------EDIKREIQIMQHLSGQQN 156 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----------~~~~--------~~~~~E~~~l~~l~~h~~ 156 (544)
|.++..||.|++|.||+|.+. +|+.||||++....... .... -...+|...|.++. +.+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~g 174 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EEG 174 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 899999999999999999975 69999999875432110 0001 11246788888885 444
Q ss_pred e--eEEEEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCC
Q 009091 157 I--VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234 (544)
Q Consensus 157 i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~ 234 (544)
+ ...++. . ..+|||||++|++|..+. .......++.||+.+|.+||+.|||||||||.|||++.++..
T Consensus 175 v~vp~p~~~--~--~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 175 FPVPEPIAQ--S--RHTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CSCCCEEEE--E--TTEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECS
T ss_pred CCCCeeeec--c--CceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCc
Confidence 3 233322 2 236999999998886542 122456788999999999999999999999999999764321
Q ss_pred -------ccEEEeecCCccccc
Q 009091 235 -------AMLKATDFGLSVFID 249 (544)
Q Consensus 235 -------~~vkl~Dfg~a~~~~ 249 (544)
..+.|+||+.+....
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEETT
T ss_pred ccccccccceEEEEeCCcccCC
Confidence 137899999887543
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-18 Score=165.91 Aligned_cols=143 Identities=23% Similarity=0.444 Sum_probs=122.2
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHH----HhCC--CCCHHHHHHH----HHhcCCCCCceeeehhhhhhh
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLA----RLGS--KLSETEVKQL----MDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~----~~~~--~~~~~~~~~~----~~~~D~d~dg~i~~~eF~~~~ 462 (544)
.++..++++++++|..||.|++|+|+.+||..+++ .+|. .++..++..+ |..+|.|++|.|+|+||+..+
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 35556677899999999999999999999999999 8898 8998888764 578899999999999999884
Q ss_pred hc-----------cccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CCC-CHHHHH----HHHHHhCCCCCc
Q 009091 463 MH-----------RYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY----GIG-DEASIK----EIISEVDTDNDG 522 (544)
Q Consensus 463 ~~-----------~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~~-~~~~~~----~~~~~~d~~~dg 522 (544)
.. .........++.+|+.+|.|++|+|+.+||+.++..+ |.. +++++. .+|..+|.|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg 163 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDG 163 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSS
T ss_pred hhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCC
Confidence 32 1224456789999999999999999999999999987 776 666664 499999999999
Q ss_pred ceeHHHHHHHHhc
Q 009091 523 RINYEEFCTMMRS 535 (544)
Q Consensus 523 ~i~~~eF~~~~~~ 535 (544)
.|+|+||+.++..
T Consensus 164 ~i~~~ef~~~~~~ 176 (272)
T 2be4_A 164 RLDLNDLARILAL 176 (272)
T ss_dssp EEEHHHHGGGSCC
T ss_pred cCcHHHHHHHHhh
Confidence 9999999988754
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=181.48 Aligned_cols=134 Identities=24% Similarity=0.377 Sum_probs=124.4
Q ss_pred hhHHH-HhhHHHHhcccCCCCCCccCHHHHHHHHHHh--------CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 394 LSEEE-IKGLKTMFANMDTDKSGTITYEELKTGLARL--------GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 394 ~~~~~-~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~--------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+++++ +++++++|..+| |++|.|+.+||..+|..+ +..++.+++..+|..+|.|++|.|+|+||+..+..
T Consensus 525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~ 603 (714)
T 3bow_A 525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603 (714)
T ss_dssp CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 67777 889999999999 999999999999999997 77899999999999999999999999999887653
Q ss_pred cccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 465 RYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 465 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
. +.++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.++..+| |+||.|+|+||+.+|..
T Consensus 604 ~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~ 668 (714)
T 3bow_A 604 I------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 668 (714)
T ss_dssp H------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred H------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 2 678999999999999999999999999999987 8899999999999 99999999999988863
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=130.54 Aligned_cols=103 Identities=23% Similarity=0.472 Sum_probs=93.1
Q ss_pred HhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC
Q 009091 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG 504 (544)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~ 504 (544)
++|..++..++..++..+| ++|.|+|+||+..+... ......++.+|+.+|+|++|+|+.+||+.++..+ |..
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARA 77 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCC
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCC
Confidence 4788899999999999998 89999999999876432 3456789999999999999999999999999999 676
Q ss_pred -CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 505 -DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 505 -~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus 78 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 78 LTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 899999999999999999999999999875
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.68 E-value=9.2e-17 Score=131.95 Aligned_cols=103 Identities=25% Similarity=0.488 Sum_probs=92.8
Q ss_pred HhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC
Q 009091 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG 504 (544)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~ 504 (544)
+++..++.+++..+|+.+| ++|.|+|+||+..+.. .....+.++.+|+.+|+|++|+|+.+||+.++..+ |..
T Consensus 2 al~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~ 77 (109)
T 3fs7_A 2 AITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARV 77 (109)
T ss_dssp CGGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCC
T ss_pred CccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccccc
Confidence 3567789999999999998 7999999999987754 23467789999999999999999999999999999 666
Q ss_pred -CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 505 -DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 505 -~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
++++++.+|..+|.|+||.|+|+||+.+|+
T Consensus 78 ~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 78 LTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 899999999999999999999999999886
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-17 Score=173.78 Aligned_cols=133 Identities=13% Similarity=0.191 Sum_probs=66.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
.++++|..||.|++|+|+.+||..+|+.+|..++.+++..+|+.+|.|++|.|+|+||+.++.... ..++++.+|+.
T Consensus 12 ~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---~~~el~~aF~~ 88 (624)
T 1djx_A 12 WIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---QRAEIDRAFEE 88 (624)
T ss_dssp --------------------------------------------------------CTTHHHHHHT---CCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---cHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999998775432 24679999999
Q ss_pred hccCCCCcccHHHHHHHHHHc-CCC--CHHHHHHHHHHhCCC----CCcceeHHHHHHHHhcCC
Q 009091 481 FDKDNSGYITRDELETAMKDY-GIG--DEASIKEIISEVDTD----NDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~-g~~--~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~~~~ 537 (544)
||.+ +|+|+.+||+.+|... |.. ++++++++|.++|.| +||.|+|+||+.+|.+..
T Consensus 89 fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~ 151 (624)
T 1djx_A 89 AAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 151 (624)
T ss_dssp HHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred hcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence 9986 9999999999999975 543 789999999999998 799999999999998754
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=129.77 Aligned_cols=103 Identities=27% Similarity=0.538 Sum_probs=92.6
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC-
Q 009091 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG- 504 (544)
Q Consensus 429 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~- 504 (544)
++..++.+++..+++.+|. +|.|+|+||+..+... ....+.++.+|+.+|+|++|+|+.+||+.+|..+ |..
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 4566889999999999987 8999999999877542 3456789999999999999999999999999998 777
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 505 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 8999999999999999999999999999874
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=129.91 Aligned_cols=103 Identities=25% Similarity=0.467 Sum_probs=92.2
Q ss_pred HhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC
Q 009091 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG 504 (544)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~ 504 (544)
.+|. ++..++..+|+.+| ++|.|+|+||+..+... ......++.+|+.+|+|++|+|+.+||+.+|..+ |..
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 4678 89999999999998 78999999999876432 3456789999999999999999999999999998 666
Q ss_pred -CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 505 -DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 505 -~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (108)
T 2pvb_A 77 LTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 108 (108)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhC
Confidence 8999999999999999999999999998763
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-16 Score=129.60 Aligned_cols=103 Identities=27% Similarity=0.482 Sum_probs=91.5
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC-
Q 009091 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG- 504 (544)
Q Consensus 429 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~- 504 (544)
+|..++.+++..+++.+| ++|.|+|+||+..+... ....+.++.+|+.+|+|++|+|+.+||+.++..+ |..
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence 355678999999999998 89999999999876432 3456789999999999999999999999999998 666
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 505 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++++.++..+|.|+||.|+|+||+.+|.+
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 8999999999999999999999999998875
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=130.48 Aligned_cols=104 Identities=26% Similarity=0.487 Sum_probs=92.8
Q ss_pred HhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC
Q 009091 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG 504 (544)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~ 504 (544)
++|..++..++..+++.+| ++|.|+|+||+..+.. .......++.+|+.+|+|++|+|+.+||+.+|..+ |..
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence 4667789999999999998 8899999999987742 23456789999999999999999999999999998 666
Q ss_pred -CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 505 -DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 505 -~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 78 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 8999999999999999999999999998875
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.9e-16 Score=128.68 Aligned_cols=102 Identities=23% Similarity=0.445 Sum_probs=90.7
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC-
Q 009091 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG- 504 (544)
Q Consensus 429 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~- 504 (544)
++..++..++..+|..+| ++|.|+|+||+..+.. .......++.+|+.+|+|++|+|+.+||+.++..+ |..
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 456789999999999998 8999999999987642 23456789999999999999999999999999998 565
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 505 DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 505 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 899999999999999999999999999875
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-16 Score=176.68 Aligned_cols=139 Identities=20% Similarity=0.432 Sum_probs=125.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~ 470 (544)
..++..++.++..+|..||.|++|+|+.+||..++..+|..++..++..+|..+|.|+||.|+|+||+..+.... ....
T Consensus 717 ~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 796 (863)
T 1sjj_A 717 KGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDT 796 (863)
T ss_dssp CCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSS
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCC
Confidence 456778889999999999999999999999999999999999999999999999999999999999998876533 2345
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCC-----CCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTD-----NDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.| .|++|+|+.+||+.+|. +++++.+|..+|.+ +||.|+|+||+.+|.+.+
T Consensus 797 ~~~l~~aF~~~-~d~~G~Is~~El~~~l~------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~~ 861 (863)
T 1sjj_A 797 ADQVMASFKIL-AGDKNYITVDELRRELP------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGES 861 (863)
T ss_dssp SHHHHHHHHGG-GTSSSEEEHHHHHHHSC------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCCS
T ss_pred HHHHHHHHHHH-hCCCCcCcHHHHHHHCC------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcCC
Confidence 57899999999 89999999999999883 68899999999987 799999999999998754
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=136.73 Aligned_cols=124 Identities=17% Similarity=0.274 Sum_probs=109.8
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
++..+|..+|.|++|.|+++||..++..+ .++..+|+.+|.|++|.|+.+||...+.........+.+..+|+.
T Consensus 64 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~ 137 (191)
T 1y1x_A 64 TTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 137 (191)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45667889999999999999999988764 678999999999999999999998887655445567889999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcc--eeHHHHHHHHhc
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGR--INYEEFCTMMRS 535 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~--i~~~eF~~~~~~ 535 (544)
+|.|+||.|+.+||..++... ..+..+|+.+|.|+||. ++|+||+.++..
T Consensus 138 ~D~d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 138 FDRQRRGSLGFDDYVELSIFV-----CRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HCTTCSSSBCHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred hCCCCCCeEeHHHHHHHHHHH-----HHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 999999999999999999864 68889999999999999 789999988763
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=140.77 Aligned_cols=126 Identities=21% Similarity=0.244 Sum_probs=112.7
Q ss_pred ccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhcccc-ccchHHHHHHHhhhccCC
Q 009091 408 NMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDN 485 (544)
Q Consensus 408 ~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~ 485 (544)
.++.+++|.|+.+|+..+++.++ ++..++..+|..+|.+ ++|.|+++||...+..... ......+..+|+.+|.|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 84 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL 84 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence 47889999999999999999987 5899999999999998 7999999999888765433 245678999999999999
Q ss_pred CCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 486 SGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 486 dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|+|+.+||..++..++.. .++++..+|..+|.|+||.|+++||..++..
T Consensus 85 ~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~ 135 (207)
T 2d8n_A 85 DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135 (207)
T ss_dssp CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 9999999999999998866 7788999999999999999999999998875
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.9e-15 Score=131.30 Aligned_cols=127 Identities=14% Similarity=0.197 Sum_probs=108.1
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc----ccc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR----YRL 468 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~----~~~ 468 (544)
.++.+ ++..+|..+|.|++|.|+.+||..++..+ .++..+|+.+| |++|.|+.+||..++... ...
T Consensus 42 ~~~~~---~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~ 111 (174)
T 2i7a_A 42 MFSLD---ECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIF 111 (174)
T ss_dssp CCCHH---HHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCC
T ss_pred CCCHH---HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCC
Confidence 44544 46678889999999999999999988764 67999999999 999999999998887654 334
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCc-ceeHHHHHHHHhc
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDG-RINYEEFCTMMRS 535 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg-~i~~~eF~~~~~~ 535 (544)
...+.++.+++.+| |+||.|+.+||..++... +.+..+|+.+|.|++| .++++||+.++..
T Consensus 112 ~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~-----~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~~ 173 (174)
T 2i7a_A 112 ISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL-----EAMAKTFRNLSKDGKGLYLTEMEWMSLVMY 173 (174)
T ss_dssp CCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH-----HHHHHHHHHHCSSSSCCCCCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCceecHHHHHHHHHh
Confidence 56788999999999 999999999999998764 5788999999999999 3499999988653
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.61 E-value=4.3e-15 Score=132.70 Aligned_cols=123 Identities=22% Similarity=0.330 Sum_probs=108.3
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhh
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYF 481 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~ 481 (544)
+..+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||...+...........+..+|+.+
T Consensus 46 ~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 119 (172)
T 2znd_A 46 VRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 119 (172)
T ss_dssp HHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 5567888999999999999999988764 6789999999999999999999988876554445678899999999
Q ss_pred ccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCccee--HHHHHHHHhc
Q 009091 482 DKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRIN--YEEFCTMMRS 535 (544)
Q Consensus 482 D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~--~~eF~~~~~~ 535 (544)
|.|++|.|+.+||..++... +.+..+|+.+|.|+||.|+ ++||+.++..
T Consensus 120 d~~~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 120 DRQGRGQIAFDDFIQGCIVL-----QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp CTTCSSSEEHHHHHHHHHHH-----HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred CCCCCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 99999999999999998764 6889999999999999995 8999988865
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.9e-16 Score=132.35 Aligned_cols=100 Identities=22% Similarity=0.338 Sum_probs=67.1
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-C-CHHHHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-G-DEASIKEII 513 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-~-~~~~~~~~~ 513 (544)
.+..+|..+|.|++|.|+|+||+..+..... ....+.++.+|+.||+|++|+|+.+||+.+|..+|. . ++++++.+|
T Consensus 4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~ 83 (135)
T 3h4s_E 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 3467899999999999999999987765332 234578999999999999999999999999999995 6 999999999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|.|+||.|+|+||+.+|...
T Consensus 84 ~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 84 REGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHHH
T ss_pred HHhCCCCCCCCcHHHHHHHHHHh
Confidence 99999999999999999998753
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.3e-16 Score=175.54 Aligned_cols=134 Identities=27% Similarity=0.402 Sum_probs=108.4
Q ss_pred hhHHH-HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCC--------CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 394 LSEEE-IKGLKTMFANMDTDKSGTITYEELKTGLARLGS--------KLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 394 ~~~~~-~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+++++ +++++++|..+| +++|.|+.+||..+|..++. .++..++..+|..+|.|++|.|+|+||+..+..
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 605 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 34444 788999999999 99999999999999998765 789999999999999999999999999887653
Q ss_pred cccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 465 RYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 465 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
. +.++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.++..+| |+||.|+|+||+.++..
T Consensus 606 ~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 670 (900)
T 1qxp_A 606 I------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 670 (900)
T ss_dssp H------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred H------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 2 678999999999999999999999999999987 8899999999999 99999999999988763
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-16 Score=129.29 Aligned_cols=103 Identities=24% Similarity=0.421 Sum_probs=90.8
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC-
Q 009091 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG- 504 (544)
Q Consensus 429 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~- 504 (544)
++..++..++..+|..+| ++|.|+|+||+..+... ....+.++.+|+.+|.|++|+|+.+||+.+|..+ |..
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL 77 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence 567789999999999998 89999999999877422 3345678999999999999999999999999998 666
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 505 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++++.++..+|.|+||.|+|+||+.+|.+
T Consensus 78 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 108 (108)
T 2kyc_A 78 TASETKTFLAAADHDGDGKIGAEEFQEMVQS 108 (108)
T ss_dssp CTTTTHHHHTTTCCSSSSCCCSSHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHhC
Confidence 7889999999999999999999999998863
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-14 Score=133.78 Aligned_cols=123 Identities=14% Similarity=0.111 Sum_probs=107.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
++..+|..+|.|++|.|+++||..++..+ .++..+|+.+|.|++|.|+.+||...+.........+.+..+|+.
T Consensus 88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~ 161 (220)
T 3sjs_A 88 TALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL 161 (220)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 35667888999999999999999998875 679999999999999999999999887655455567789999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHh-CCCCCc------ceeHHHHHHHHhc
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEV-DTDNDG------RINYEEFCTMMRS 535 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg------~i~~~eF~~~~~~ 535 (544)
+| |+||.|+.+||..++..+ ..+..+|+.+ |.+++| .|+|+||+.++..
T Consensus 162 ~d-d~dg~I~~~eF~~~~~~l-----~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 162 FA-RGMAFCDLNCWIAICAFA-----AQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HC---CCSEEHHHHHHHHHHH-----HHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred hc-CCCCcCcHHHHHHHHHHH-----HHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 99 999999999999999875 3688899999 999999 8999999998875
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.55 E-value=5.5e-14 Score=125.59 Aligned_cols=121 Identities=20% Similarity=0.287 Sum_probs=103.7
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
.++..+|..+|.|++|.|+++||..++..+ .++..+|+.+|.|++|.|+..||...+...........+..+|+
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 120 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR 120 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 346678889999999999999999988864 68999999999999999999999888765444556788999999
Q ss_pred hhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 480 YFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
.+| |++|.|+.+||..++... +.+..+|+.+|.|+||.|+.+ |...|
T Consensus 121 ~~d-d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~-~~~~l 167 (173)
T 1alv_A 121 RYS-DEGGNMDFDNFISCLVRL-----DAMFRAFKSLDKDGTGQIQVN-IQEWL 167 (173)
T ss_dssp HHT-CSSSCBCHHHHHHHHHHH-----HHHHHHHHHHSSSCCSEEEEE-HHHHH
T ss_pred Hhc-CCCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeecHh-HHHHH
Confidence 999 999999999999998763 688999999999999999855 44433
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-14 Score=132.55 Aligned_cols=118 Identities=23% Similarity=0.383 Sum_probs=95.0
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc---------c---c
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY---------R---L 468 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~---------~---~ 468 (544)
.+..+|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++.... . .
T Consensus 64 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~ 143 (193)
T 1bjf_A 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 143 (193)
T ss_dssp HHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGS
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccc
Confidence 467899999999999999999999999998888889999999999999999999999988774321 0 1
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI 524 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i 524 (544)
.....+..+|+.+|.|+||+|+.+||..++.. +.++..+| .+|.|+||.|
T Consensus 144 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 144 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS-----DPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp SHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH-----CTHHHHTT-CC--------
T ss_pred cHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc-----CHHHHHHh-ccCCCCCCCC
Confidence 22456899999999999999999999999974 35788889 9999999986
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-14 Score=128.71 Aligned_cols=122 Identities=20% Similarity=0.282 Sum_probs=108.2
Q ss_pred CCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhcccc-ccchHHHHHHHhhhccCCCCcc
Q 009091 412 DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYI 489 (544)
Q Consensus 412 ~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~I 489 (544)
+..|.|+.+++..+...++ ++..++..+|..+|.| ++|.|+++||...+..... ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80 (190)
T ss_dssp CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCE
T ss_pred cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeE
Confidence 5678999999999998875 4889999999999999 8999999999887765422 2345678999999999999999
Q ss_pred cHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 490 TRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 490 s~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+||..++..++.. .++++..+|..+|.|++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 81 DFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp EHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred eHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 999999999988877 7889999999999999999999999998875
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-14 Score=132.97 Aligned_cols=129 Identities=22% Similarity=0.397 Sum_probs=107.6
Q ss_pred HHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc------cccc
Q 009091 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY------RLER 470 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~------~~~~ 470 (544)
...+.+..+|..+|.|++|.|+++||..++..++......++..+|+.+|.|++|.|+++||..++.... ....
T Consensus 54 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 133 (211)
T 2ggz_A 54 KANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSP 133 (211)
T ss_dssp HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTH
T ss_pred chHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccH
Confidence 3445688899999999999999999999999988888888999999999999999999999998776442 2223
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.+..+|+.+|.|+||.|+.+||..++.. ..++.++|.. .++|+||+.+|..+.
T Consensus 134 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~~~-------~~d~~~f~~~~~~~~ 188 (211)
T 2ggz_A 134 EEFINLVFHKIDINNDGELTLEEFINGMAK-----DQDLLEIVYK-------SFDFSNVLRVICNGK 188 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHT-----TTTTHHHHHH-------HSCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHh-----CHHHHHHHhc-------cCCHHHHHHHHhcCC
Confidence 456899999999999999999999999874 3456666763 355999999998653
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-14 Score=155.98 Aligned_cols=131 Identities=11% Similarity=0.187 Sum_probs=99.7
Q ss_pred HhhHHHHhc--ccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCC-------CCCceeeehhhhhhhhcccccc
Q 009091 399 IKGLKTMFA--NMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV-------DGNGTIDYIEFISATMHRYRLE 469 (544)
Q Consensus 399 ~~~l~~~F~--~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~-------d~dg~i~~~eF~~~~~~~~~~~ 469 (544)
...++++|. .||.|++|+|+.+|+..+|.. ...++..+++.+|. +++|.|+|+||+.++....
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--- 216 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--- 216 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc---
Confidence 346888999 899999999999999988765 47899999999984 7889999999998876532
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CCC----------CHHHHHHHHHHhCCC----CCcceeHHHHHHHHh
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GIG----------DEASIKEIISEVDTD----NDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~~----------~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~ 534 (544)
..++++.+|+.||.|++|+|+.+||+.+|..+ |.. +++++++||.++|.| +||.|+|+||+++|.
T Consensus 217 ~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~ 296 (799)
T 2zkm_X 217 PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLC 296 (799)
T ss_dssp CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhccc
Confidence 35789999999999999999999999999987 442 467899999999999 899999999999998
Q ss_pred cCC
Q 009091 535 SGT 537 (544)
Q Consensus 535 ~~~ 537 (544)
+..
T Consensus 297 S~~ 299 (799)
T 2zkm_X 297 GPE 299 (799)
T ss_dssp STT
T ss_pred Ccc
Confidence 754
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-13 Score=121.16 Aligned_cols=121 Identities=22% Similarity=0.285 Sum_probs=104.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
++..+|..+|.|++|.|+++||..++..+ .++..+|+.+|.|++|.|+.+||...+...........+..+|+.
T Consensus 43 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 116 (167)
T 1gjy_A 43 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR 116 (167)
T ss_dssp HHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 46677889999999999999999988764 689999999999999999999998887654444567889999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeH--HHHHHHHh
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINY--EEFCTMMR 534 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~--~eF~~~~~ 534 (544)
+ |++|.|+.+||..++... ..+..+|+.+|.|++|.|+. .+|+.++.
T Consensus 117 ~--d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~~~~~l~~~~ 165 (167)
T 1gjy_A 117 Y--STSGKITFDDYIACCVKL-----RALTDSFRRRDSAQQGMVNFSYDDFIQCVM 165 (167)
T ss_dssp T--CBTTBEEHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred h--CcCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCeeEEeeHHHHHHHHH
Confidence 9 899999999999998764 68889999999999999986 56665543
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-13 Score=121.07 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=101.9
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
++..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||...+.........+.+..+|+.
T Consensus 41 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 114 (165)
T 1k94_A 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 46678889999999999999999988764 689999999999999999999998877654444567788999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
+ |++|.|+.+||..++... +.+..+|+.+|.|++|.|+.+ |..+|
T Consensus 115 ~--d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~-~~~~l 159 (165)
T 1k94_A 115 Y--SKNGRIFFDDYVACCVKL-----RALTDFFRKRDHLQQGSANFI-YDDFL 159 (165)
T ss_dssp H--CBTTBCBHHHHHHHHHHH-----HHHHHHHHTTCTTCCSEEEEE-HHHHH
T ss_pred h--CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeee-HHHHH
Confidence 8 899999999999999874 688899999999999999655 54444
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-13 Score=124.16 Aligned_cols=121 Identities=22% Similarity=0.284 Sum_probs=105.0
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
++..+|..+|.|++|.|+++||..++..+ .++..+|+.+|.|++|.|+.+||...+.........+.+..+|+.
T Consensus 74 ~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~ 147 (198)
T 1juo_A 74 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR 147 (198)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 46678889999999999999999988864 689999999999999999999998877654444567889999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeH--HHHHHHHh
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINY--EEFCTMMR 534 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~--~eF~~~~~ 534 (544)
+ |+||.|+.+||..++... ..+..+|+.+|.|+||.|+. ++|+.++.
T Consensus 148 ~--d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~is~~~~~~l~~~~ 196 (198)
T 1juo_A 148 Y--STNGKITFDDYIACCVKL-----RALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196 (198)
T ss_dssp T--CSSSSEEHHHHHHHHHHH-----HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred h--CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeecHHHHHHHHh
Confidence 9 899999999999999874 67889999999999999987 77777654
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.47 E-value=2.5e-14 Score=123.32 Aligned_cols=94 Identities=23% Similarity=0.293 Sum_probs=50.5
Q ss_pred HHHHhcCCCCCceeeehhhhhhhhccc-----cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC--------CC-C
Q 009091 440 QLMDAADVDGNGTIDYIEFISATMHRY-----RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--------IG-D 505 (544)
Q Consensus 440 ~~~~~~D~d~dg~i~~~eF~~~~~~~~-----~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--------~~-~ 505 (544)
.+|..+|.|++|.|+|+||+..+.... .....+.++.+|+.||+|+||+|+.+||+.++..++ .. +
T Consensus 31 ~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s 110 (143)
T 3a4u_B 31 SQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 110 (143)
T ss_dssp --------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CC
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCC
Confidence 456666666666666666655443321 112346788899999999999999999999988763 33 6
Q ss_pred HHHHHHHH----HHhCCCCCcceeHHHHHHHH
Q 009091 506 EASIKEII----SEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 506 ~~~~~~~~----~~~d~~~dg~i~~~eF~~~~ 533 (544)
+++++.++ ..+|.|+||.|+|+||+.+|
T Consensus 111 ~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 111 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 67775555 99999999999999999876
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.46 E-value=8.2e-14 Score=156.15 Aligned_cols=134 Identities=21% Similarity=0.351 Sum_probs=105.1
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc------------
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR------------ 467 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~------------ 467 (544)
+++..+|..||.|++|+|+.+||..++..+|..++..++..++..+| |++|.|+|+||+..+.....
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d~ 685 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPEN 685 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 67899999999999999999999999999999999999999999999 99999999999876642100
Q ss_pred -----------------------------------------ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC---
Q 009091 468 -----------------------------------------LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI--- 503 (544)
Q Consensus 468 -----------------------------------------~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~--- 503 (544)
......++.+|+.+|.+ +|.|+.+||+.+|..++.
T Consensus 686 ~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~~ 764 (900)
T 1qxp_A 686 TGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRHP 764 (900)
T ss_dssp CSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----CC
T ss_pred CceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccccc
Confidence 00112344556666655 666788999888877652
Q ss_pred -----C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 504 -----G-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 504 -----~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
. +.++++.++..+|.|+||.|+|+||+.++..
T Consensus 765 ~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~ 802 (900)
T 1qxp_A 765 DLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 802 (900)
T ss_dssp SCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence 3 6789999999999999999999999988753
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.46 E-value=3.3e-13 Score=125.67 Aligned_cols=142 Identities=13% Similarity=0.221 Sum_probs=111.8
Q ss_pred hhHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCC--------CC-----HHHHHHHHHhcCCCCCceeeehhhh
Q 009091 394 LSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSK--------LS-----ETEVKQLMDAADVDGNGTIDYIEFI 459 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~--------~~-----~~~~~~~~~~~D~d~dg~i~~~eF~ 459 (544)
++--++..+.++|.....+ ++..|+..++...|..+... .. +.-++.+|+.||.|++|.|+|.||+
T Consensus 76 l~lv~l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~ 155 (261)
T 1eg3_A 76 LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFK 155 (261)
T ss_dssp GGGCCHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHH
T ss_pred eceeeHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHH
Confidence 4444555666677665443 66789999988877665221 11 2235679999999999999999999
Q ss_pred hhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHH-------cCC------C-CHHHHHHHHHHhCCCCCccee
Q 009091 460 SATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKD-------YGI------G-DEASIKEIISEVDTDNDGRIN 525 (544)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-------~g~------~-~~~~~~~~~~~~d~~~dg~i~ 525 (544)
..+........+++++.+|+.|| |+||+|+.+||..+|+. +|. . .++.++.+|..+| +||.|+
T Consensus 156 ~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It 232 (261)
T 1eg3_A 156 TGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIE 232 (261)
T ss_dssp HHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBC
T ss_pred HHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCC
Confidence 99888788888899999999999 99999999999999855 232 2 4778899999996 899999
Q ss_pred HHHHHHHHhcCCC
Q 009091 526 YEEFCTMMRSGTP 538 (544)
Q Consensus 526 ~~eF~~~~~~~~~ 538 (544)
.+||+.-+++.+.
T Consensus 233 ~~EFl~~~~~dp~ 245 (261)
T 1eg3_A 233 AALFLDWMRLEPQ 245 (261)
T ss_dssp HHHHHHHHHTCCT
T ss_pred HHHHHHHHHhCcH
Confidence 9999999887643
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-13 Score=124.38 Aligned_cols=122 Identities=21% Similarity=0.324 Sum_probs=105.8
Q ss_pred CCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhcccc-ccchHHHHHHHhhhccCCCCcc
Q 009091 412 DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYI 489 (544)
Q Consensus 412 ~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~I 489 (544)
++.+.|+.+++..+.... .++.+++..+|+.+|.+ ++|.|+++||...+..... ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 1fpw_A 3 AKTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80 (190)
T ss_dssp CCSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred cccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence 467789999988877664 56899999999999987 8999999999887754321 2345678999999999999999
Q ss_pred cHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 490 TRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 490 s~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+||..++..++.. .++++..+|..+|.|+||.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 81 HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp CHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred eHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 999999999998876 7789999999999999999999999999876
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-13 Score=122.51 Aligned_cols=117 Identities=18% Similarity=0.223 Sum_probs=97.8
Q ss_pred cCHHHHHHHHHHhCCCCCHHHHHHHHHhcCC-CCCceeeehhhhhhhhccccc-cchHHHHHHHhhhccCCCCcccHHHH
Q 009091 417 ITYEELKTGLARLGSKLSETEVKQLMDAADV-DGNGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDEL 494 (544)
Q Consensus 417 I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~-d~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~Is~~el 494 (544)
++.+|+..++...+ ++..++..+++.||. |++|.|++.||...+...... .....+..+|+.+|.|++|.|+.+||
T Consensus 1 l~~~el~~l~~~~~--~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 1 HRPEGLEQLEAQTN--FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp -----CHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred CChHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 45677787777654 488999999999998 899999999998877654332 56778999999999999999999999
Q ss_pred HHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 495 ETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 495 ~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..++..++.. .++++..+|+.+|.|++|.|+++||..++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 120 (183)
T 1s6c_A 79 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120 (183)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 9999887655 6788999999999999999999999999875
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-14 Score=120.73 Aligned_cols=104 Identities=19% Similarity=0.261 Sum_probs=56.2
Q ss_pred HHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhh-----hhhccc-cccchHHHHHHHhhhccCCCCcccHHHHHHHHH
Q 009091 426 LARLGSKLSETEVKQLMDAADVDGNGTIDYIEFIS-----ATMHRY-RLERDEHLYKAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 426 l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~-----~~~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
|+.+|.+++..++..++..+ +|.|+|+||+. .+.... .......++.+|+.|| |+|+.+||+.+|+
T Consensus 2 lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~ 73 (123)
T 2kld_A 2 STAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLK 73 (123)
T ss_dssp -----------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTT
T ss_pred hhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHH
Confidence 56788899999999999876 88999999998 443322 1223356788999998 9999999999999
Q ss_pred HcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 500 DYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 500 ~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
.+|. ++++++.+|..+|.|+||.|+|+||+.+|.+...
T Consensus 74 ~lG~-t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 111 (123)
T 2kld_A 74 GKGH-TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEK 111 (123)
T ss_dssp TCCS-SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTTC
T ss_pred HhCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH
Confidence 9998 8999999999999999999999999999866543
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-13 Score=108.93 Aligned_cols=65 Identities=38% Similarity=0.775 Sum_probs=61.1
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
....+++.+|+.||+|++|+|+.+||+.+|+.+|.. ++++++.+|+.+|.|+||.|+|+||+++|
T Consensus 33 ~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp GGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 345679999999999999999999999999999988 88999999999999999999999999876
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.40 E-value=4.2e-13 Score=125.21 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=99.5
Q ss_pred CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhcccc-ccchHHHHHHHhhhccCCCCccc
Q 009091 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYIT 490 (544)
Q Consensus 413 ~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~Is 490 (544)
..+.++.+++..++...+ ++..++..+|+.||.+ ++|.|+++||...+..... ......+..+|+.+|.|++|.|+
T Consensus 30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~ 107 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK 107 (224)
T ss_dssp --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence 457899999999888875 6999999999999984 9999999999888765433 25677889999999999999999
Q ss_pred HHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 491 RDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 491 ~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+||..++..++.. .++++..+|+.+|.|+||.|+++||..++..
T Consensus 108 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~ 153 (224)
T 1s1e_A 108 FEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153 (224)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHH
Confidence 99999999887655 6778999999999999999999999999865
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.40 E-value=7.9e-13 Score=119.81 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=103.7
Q ss_pred CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhcccc-ccchHHHHHHHhhhccCCCCccc
Q 009091 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYIT 490 (544)
Q Consensus 413 ~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~Is 490 (544)
..+.++.+++..+.... .++..++..+|+.+|.+ ++|.|+++||...+..... ......+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred ccccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 45678999998887765 45899999999999998 8999999999887764311 23456789999999999999999
Q ss_pred HHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 491 RDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 491 ~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+||..++..++.. ..+++..+|..+|.|+||.|+++||..++..
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 82 FSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 99999999887655 6778999999999999999999999999876
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-12 Score=123.67 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=109.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
..|++...+|.|+.+.||++... +..+++|+...... .....+.+|+.+++.|.++..+.++++++...+..|+|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34888888898999999998743 68899998753211 22345889999999997677888999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF---------------------------------------- 213 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~---------------------------------------- 213 (544)
|||++|.+|.+.+ .+......++.++..+|..||+
T Consensus 89 ~e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 89 MSEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp EECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EEecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999987652 1122345778899999999998
Q ss_pred -------------------cCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 214 -------------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 214 -------------------~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
..++|+|++|.|||+.. ...+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~---~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD---GKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET---TEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC---CcEEEEEEchhcc
Confidence 45899999999999953 2356799999774
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=119.41 Aligned_cols=114 Identities=21% Similarity=0.339 Sum_probs=95.0
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-------cc
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-------RL 468 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-------~~ 468 (544)
....+.+..+|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++.... ..
T Consensus 48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~ 127 (198)
T 2r2i_A 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAM 127 (198)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCC
T ss_pred cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchh
Confidence 34445688899999999999999999999999998888889999999999999999999999998875432 12
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHH
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIIS 514 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~ 514 (544)
...+.+..+|+.+|.|+||+|+.+||..++.. ..++..++.
T Consensus 128 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~~ 168 (198)
T 2r2i_A 128 TAEEFTNMVFDKIDINGDGELSLEEFMEGVQK-----DEVLLDILT 168 (198)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT-----CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc-----CHHHHHHHh
Confidence 23455899999999999999999999998863 245555554
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-13 Score=107.82 Aligned_cols=84 Identities=35% Similarity=0.476 Sum_probs=71.0
Q ss_pred CCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeH
Q 009091 448 DGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINY 526 (544)
Q Consensus 448 d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~ 526 (544)
|++|.|+|+|++ +...........++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|
T Consensus 1 ~~~G~i~~~e~~--~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~ 78 (87)
T 1s6j_A 1 HSSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCccHHH--HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 578999999943 2222222334568899999999999999999999999999988 8999999999999999999999
Q ss_pred HHHHHHH
Q 009091 527 EEFCTMM 533 (544)
Q Consensus 527 ~eF~~~~ 533 (544)
+||+.++
T Consensus 79 ~eF~~~~ 85 (87)
T 1s6j_A 79 GEFIAAT 85 (87)
T ss_dssp HHHTTCC
T ss_pred HHHHHHH
Confidence 9998764
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=113.51 Aligned_cols=89 Identities=18% Similarity=0.377 Sum_probs=77.5
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHH
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLY 475 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~ 475 (544)
.++++++..+|..||.|++|+|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+..+... ...+.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~ 118 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL 118 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 5778899999999999999999999999999999999999999999999999999999999999877543 45678
Q ss_pred HHHhhhccCCCCcc
Q 009091 476 KAFQYFDKDNSGYI 489 (544)
Q Consensus 476 ~~F~~~D~d~dG~I 489 (544)
.+|+.+|.|++|..
T Consensus 119 ~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 119 RMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGCCCC-----
T ss_pred HHHHHHccCCCCCC
Confidence 89999999999984
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.35 E-value=2.3e-12 Score=118.62 Aligned_cols=121 Identities=20% Similarity=0.197 Sum_probs=92.5
Q ss_pred CCCCCccCHHHHHHHHHHhCCCCCHHH---HHHHHHhcCCC--CCceeeehhhhhhhhccccccchHHHHHHHhhhccCC
Q 009091 411 TDKSGTITYEELKTGLARLGSKLSETE---VKQLMDAADVD--GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDN 485 (544)
Q Consensus 411 ~~~~G~I~~~e~~~~l~~~~~~~~~~~---~~~~~~~~D~d--~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~ 485 (544)
.|+.|.|+.+++..+....+. +..+ +..+|..+|.| ++|.|+++||...+.. ........+..+|+.+|.|+
T Consensus 11 ~~~~g~l~~~el~~l~~~~~~--s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~ 87 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVTPF--TVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKR 87 (207)
T ss_dssp ----------CHHHHHHHSSC--CHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTC
T ss_pred hccccccCHHHHHHHHHhCCC--CHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCC
Confidence 367899999999988887653 4444 56788899999 9999999999887754 22233456788999999999
Q ss_pred CCcccHHHHHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 486 SGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 486 dG~Is~~el~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
+|.|+.+||..++...+.. ..+.+..+|..+|.|+||.|+++||..++.
T Consensus 88 ~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp SSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999887643 567899999999999999999999999885
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=111.03 Aligned_cols=99 Identities=22% Similarity=0.436 Sum_probs=85.4
Q ss_pred HHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHH---HcCCC-CHHHHHHHH
Q 009091 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK---DYGIG-DEASIKEII 513 (544)
Q Consensus 438 ~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~---~~g~~-~~~~~~~~~ 513 (544)
+..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++. ..+.. +..++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 67899999999999999999998876554555677899999999999999999999999886 23333 566799999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.|++|.|+++||..++...
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~ 104 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTT
T ss_pred HHHCCCCCCccCHHHHHHHHHHh
Confidence 99999999999999999998753
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.7e-13 Score=106.72 Aligned_cols=71 Identities=30% Similarity=0.571 Sum_probs=66.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.++++++++++++|..||.|++|+|+.+||..+|+.+|..++..+++.+|+.+|.|+||.|+|+||+..+.
T Consensus 29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 46788889999999999999999999999999999999999999999999999999999999999987653
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.8e-12 Score=116.85 Aligned_cols=104 Identities=19% Similarity=0.159 Sum_probs=92.5
Q ss_pred CCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHH
Q 009091 432 KLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASI 509 (544)
Q Consensus 432 ~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~ 509 (544)
.++..++..+|..+|.| ++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++..++.. .++++
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 34678899999999999 89999999999887654444566789999999999999999999999999988766 77899
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 510 KEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 510 ~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+|..+|.|++|.|+++||..++..
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~ 123 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVES 123 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999998875
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.8e-12 Score=112.93 Aligned_cols=99 Identities=22% Similarity=0.274 Sum_probs=86.1
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCH--------HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSE--------TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~--------~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~ 473 (544)
+..+|..+|.|++|.|+.+||..++......... ..+..+|+.+|.|++|.|+++||...+.... ...+.
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~ 137 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAE 137 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHH
Confidence 4488999999999999999999999887555543 5689999999999999999999988775443 56788
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcC
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g 502 (544)
+..+|+.+|.|+||+|+.+||..++..+.
T Consensus 138 ~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 138 AAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999987665
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-12 Score=112.83 Aligned_cols=89 Identities=19% Similarity=0.362 Sum_probs=73.1
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHH
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLY 475 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~ 475 (544)
..+++++..+|..||.|++|+|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+..+... ...+.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~ 120 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL 120 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 4667889999999999999999999999999999999999999999999999999999999999877643 34589
Q ss_pred HHHhhhccCCCCcc
Q 009091 476 KAFQYFDKDNSGYI 489 (544)
Q Consensus 476 ~~F~~~D~d~dG~I 489 (544)
.+|+.||.|++|+-
T Consensus 121 ~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 121 KLVMMFEGKANESS 134 (150)
T ss_dssp HHHHC---------
T ss_pred HHHHHHcCCCCCCC
Confidence 99999999999984
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-12 Score=119.56 Aligned_cols=113 Identities=20% Similarity=0.326 Sum_probs=95.2
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc------------ccc
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR------------YRL 468 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~------------~~~ 468 (544)
.+.++|..+|.|++|.|+.+||..++..+......+.+..+|+.+|.|++|.|+++||...+... ...
T Consensus 103 ~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~ 182 (229)
T 3dd4_A 103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED 182 (229)
T ss_dssp HHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchh
Confidence 36678999999999999999999999988766778889999999999999999999998877543 112
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDT 518 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~ 518 (544)
...+.+..+|+.+|.|+||.|+.+||..++.. ...+..+|..+|.
T Consensus 183 ~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~-----~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 183 APRQHVETFFQKMDKNKDGVVTIDEFIESCQK-----DENIMRSMQLFEN 227 (229)
T ss_dssp -CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT-----CHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh-----CHHHHHHHHhccc
Confidence 34567899999999999999999999999884 3577778887774
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.7e-12 Score=102.36 Aligned_cols=65 Identities=15% Similarity=0.294 Sum_probs=58.2
Q ss_pred hHHHHHHHhhhc-cCCC-CcccHHHHHHHHHH-c----CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNS-GYITRDELETAMKD-Y----GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~d-G~Is~~el~~~l~~-~----g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.|| +||+ |+|+.+||+.+|+. + |.. ++++++++|+++|.|+||.|+|+||+.+|..
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 467889999998 8998 99999999999986 4 555 8899999999999999999999999998763
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-12 Score=113.39 Aligned_cols=94 Identities=23% Similarity=0.327 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHH
Q 009091 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE 511 (544)
Q Consensus 433 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~ 511 (544)
++..++..++..+|.+++ |.+|... ......++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.
T Consensus 21 ~~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~ 90 (150)
T 2jjz_A 21 RQERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKK 90 (150)
T ss_dssp HHHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 457789999999987664 4444322 2345678999999999999999999999999999987 8999999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 512 IISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 512 ~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
++..+|.|+||.|+|+||+.++...
T Consensus 91 l~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 91 MISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp HHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred HHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 9999999999999999999998763
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=106.18 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=88.6
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHH-cCCC-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKD-YGIG-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~g~~-~~~~~~~~~ 513 (544)
.++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++.. +... ..+.+..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 85 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF 85 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 56889999999999999999999987765555566788999999999999999999999999876 3333 778999999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|.|++|.|+.+||..++...
T Consensus 86 ~~~D~d~~G~i~~~el~~~l~~~ 108 (142)
T 2bl0_C 86 RTFDPEGTGYIPKAALQDALLNL 108 (142)
T ss_dssp HHTCCSSCSCEEHHHHHHHHHHS
T ss_pred HHHCCCCCCcCcHHHHHHHHHHc
Confidence 99999999999999999998754
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-11 Score=134.96 Aligned_cols=130 Identities=9% Similarity=0.170 Sum_probs=112.1
Q ss_pred hhHHHHhcc--cCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-------CCceeeehhhhhhhhccccccc
Q 009091 400 KGLKTMFAN--MDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-------GNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 400 ~~l~~~F~~--~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-------~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
..++++|.. +|.|++|.|+.+|+...+.. ...++..+|+.+|.+ ++|.|+|+||+.++.... .
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~---~ 221 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC---L 221 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS---C
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC---C
Confidence 457778887 89999999999999987775 467899999999987 789999999988775432 3
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcC-C----------CCHHHHHHHHHHhCCC----CCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG-I----------GDEASIKEIISEVDTD----NDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g-~----------~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~~ 535 (544)
..+++.+|+.||.+++|+||.+||+.+|...+ . .+++++.+||..++.+ ++|.|++++|.++|.+
T Consensus 222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 56899999999999999999999999999875 3 2678999999999999 7999999999999987
Q ss_pred CC
Q 009091 536 GT 537 (544)
Q Consensus 536 ~~ 537 (544)
..
T Consensus 302 ~~ 303 (885)
T 3ohm_B 302 EE 303 (885)
T ss_dssp TT
T ss_pred cc
Confidence 54
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-12 Score=117.83 Aligned_cols=115 Identities=18% Similarity=0.263 Sum_probs=94.2
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc-------ccccchHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR-------YRLERDEH 473 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-------~~~~~~~~ 473 (544)
++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+++||...+... ......+.
T Consensus 74 ~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~ 153 (204)
T 3e3r_A 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEV 153 (204)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHH
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHH
Confidence 46778899999999999999999988765544456679999999999999999999998877532 12234567
Q ss_pred HHHHHhhhcc-CCCCcccHHHHHHHHHHcCC--CCHHHHHHHHHH
Q 009091 474 LYKAFQYFDK-DNSGYITRDELETAMKDYGI--GDEASIKEIISE 515 (544)
Q Consensus 474 ~~~~F~~~D~-d~dG~Is~~el~~~l~~~g~--~~~~~~~~~~~~ 515 (544)
+..+|+.+|. |+||.|+.+||..++..++. .++++++.++..
T Consensus 154 ~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~~f~~~~~~ 198 (204)
T 3e3r_A 154 LRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEEFVAMMTS 198 (204)
T ss_dssp HHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChHHHHHHHHH
Confidence 8999999998 99999999999999998773 266777776654
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.6e-12 Score=102.26 Aligned_cols=100 Identities=17% Similarity=0.241 Sum_probs=83.4
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---cccc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRLE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~~ 469 (544)
.++.++ +.++|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||...+... ....
T Consensus 6 ~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 6 ILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 345554 556677777 8999999999988764 34567889999999999999999999998877655 3455
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
..+.+..+|+.+|.|+||.|+.+||..+++
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 678899999999999999999999998874
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.29 E-value=6.6e-12 Score=136.46 Aligned_cols=123 Identities=20% Similarity=0.215 Sum_probs=107.8
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
++..+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||..++.........+.+..+|+.
T Consensus 576 ~~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~ 649 (714)
T 3bow_A 576 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVAR 649 (714)
T ss_dssp HHHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 36677889999999999999999998875 789999999999999999999998887654444567889999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+| |+||.|+.+||..++... +.+..+|+.+|.|++|.|+++|+..++..
T Consensus 650 ~D-d~dG~Isf~EF~~~l~~~-----~~l~~~F~~~D~d~dG~Is~~el~~l~~~ 698 (714)
T 3bow_A 650 FA-DDELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSFS 698 (714)
T ss_dssp HS-CTTCEECHHHHHHHHHHH-----HHHHHHHSSSCSSCCSEEEEEHHHHHHHH
T ss_pred hC-CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEHHHHHHHHHH
Confidence 99 999999999999998764 58889999999999999999988766543
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.3e-12 Score=120.90 Aligned_cols=120 Identities=20% Similarity=0.206 Sum_probs=99.5
Q ss_pred CCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhhhccc-cccchHHHHHHHhhhccCCCCcccH
Q 009091 414 SGTITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISATMHRY-RLERDEHLYKAFQYFDKDNSGYITR 491 (544)
Q Consensus 414 ~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~ 491 (544)
.+.++.+++..++...+ ++.+++..+|+.||.+ ++|.|+++||...+.... .......+..+|+.+|.|++|.|+.
T Consensus 71 ~~~l~~e~l~~l~~~~~--~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~ 148 (256)
T 2jul_A 71 TVRHQPEGLDQLQAQTK--FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHF 148 (256)
T ss_dssp -----CTHHHHHHHHTT--SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECS
T ss_pred cccCCHHHHHHHHHHhC--CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcH
Confidence 34577778887777654 6899999999999875 899999999988776543 2345678899999999999999999
Q ss_pred HHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 492 DELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 492 ~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+||..++..++.. .++++..+|..+|.|+||.|+++||..++..
T Consensus 149 ~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~ 193 (256)
T 2jul_A 149 EDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193 (256)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999988766 7788999999999999999999999999874
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.28 E-value=8.3e-12 Score=107.53 Aligned_cols=101 Identities=23% Similarity=0.309 Sum_probs=86.0
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC-C-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-G-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~-~-~~~~~~~~~ 513 (544)
.++..+|..+|.|++|.|+..||...+...........+..+|+.+|.|++|.|+.+||..++..... . ..+++..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 85 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHH
Confidence 56889999999999999999999887765544567788999999999999999999999988764311 1 356788999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.|++|.|+.+||..++...
T Consensus 86 ~~~D~d~~G~I~~~el~~~l~~~ 108 (143)
T 2obh_A 86 KLFDDDETGKISFKNLKRVAKEL 108 (143)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHT
T ss_pred HHhCCCCCCcCcHHHHHHHHHHh
Confidence 99999999999999999998753
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=3e-12 Score=105.39 Aligned_cols=106 Identities=20% Similarity=0.332 Sum_probs=74.4
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
+..++.+.++|..||.| +|+|+.+||+.+|+. ++...+..++..+++.+|.|+||.|+|+||+..+.....
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~--- 86 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI--- 86 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH---
Confidence 34567899999999988 899999999999987 788889999999999999999999999999987654221
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDND 521 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~d 521 (544)
.....|....+..+++.. .+..+.++|+++|.|||
T Consensus 87 --~~he~f~~~~k~~~~~~~--------------~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 87 --ACNDYFVVHMKQENLYFQ--------------GDSTVHEILSKLSLEGD 121 (121)
T ss_dssp --HHHHHHTTSCC-----------------------CCHHHHHHHCCC---
T ss_pred --HHHHHHHHHHHHhccCCC--------------CchHHHHHHHHhcccCC
Confidence 112345444443332221 23456677777777665
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.7e-11 Score=100.12 Aligned_cols=102 Identities=19% Similarity=0.250 Sum_probs=84.4
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---ccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRL 468 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~ 468 (544)
..++.++ +.++|..+|. +|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||...+... ...
T Consensus 4 ~~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~ 76 (109)
T 5pal_A 4 KVLKADD---INKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp GTSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CcCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence 3455555 5666777776 899999999988754 24567889999999999999999999998877654 445
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
...+.++.+|+.+|.|++|.|+.+||..++..
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 77 LNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 56788999999999999999999999998865
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=91.07 Aligned_cols=63 Identities=24% Similarity=0.487 Sum_probs=59.6
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.++.+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46789999999999999999999999999988 8999999999999999999999999999875
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-11 Score=107.72 Aligned_cols=100 Identities=27% Similarity=0.333 Sum_probs=84.7
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhC----CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLG----SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~ 476 (544)
++..+|..+|.|++|.|+++||..++.... .......+..+|+.+|.|++|.|+.+||...+.........+.+..
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~ 135 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 135 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH
Confidence 366788999999999999999999988754 3445677999999999999999999999988765544456788999
Q ss_pred HHhhhccCCCCcccHHHHHHHHHH
Q 009091 477 AFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
+|+.+|.|+||.|+.+||..++..
T Consensus 136 ~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 136 LMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp HHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHc
Confidence 999999999999999999998864
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=109.05 Aligned_cols=97 Identities=22% Similarity=0.255 Sum_probs=82.3
Q ss_pred HHHhcccCCCCCCccCHHHHHHHHHHhCCCCC-------HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHH
Q 009091 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLS-------ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLY 475 (544)
Q Consensus 403 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~-------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~ 475 (544)
..+|..+|.|++|.|+.+||..++.......+ ...+..+|+.+|.|++|.|+++||...+.... ...+.+.
T Consensus 58 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~ 135 (166)
T 3akb_A 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLAR 135 (166)
T ss_dssp HHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHH
Confidence 47899999999999999999998887643221 23488999999999999999999988775443 5678899
Q ss_pred HHHhhhccCCCCcccHHHHHHHHHHc
Q 009091 476 KAFQYFDKDNSGYITRDELETAMKDY 501 (544)
Q Consensus 476 ~~F~~~D~d~dG~Is~~el~~~l~~~ 501 (544)
.+|+.+|.|+||.|+.+||..++..+
T Consensus 136 ~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 136 QAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999998654
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-11 Score=96.50 Aligned_cols=68 Identities=40% Similarity=0.719 Sum_probs=63.5
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....+.++.+|+.||.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 25 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 4456789999999999999999999999999999987 8999999999999999999999999998874
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=96.65 Aligned_cols=74 Identities=30% Similarity=0.509 Sum_probs=66.2
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR 465 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 465 (544)
...+++++++++..+|..+|.|++|+|+.+||..++..+| .++..++..+|..+|.|++|.|+|+||+..+...
T Consensus 2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 4567888999999999999999999999999999999999 9999999999999999999999999999877544
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.9e-11 Score=97.94 Aligned_cols=102 Identities=22% Similarity=0.201 Sum_probs=83.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---ccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRL 468 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~ 468 (544)
..+++++ +..+|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||...+... ...
T Consensus 4 ~~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (109)
T 1rwy_A 4 DLLSAED---IKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD 76 (109)
T ss_dssp HHSCHHH---HHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CcCCHHH---HHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCC
Confidence 3455555 556677788 89999999999887432 3467889999999999999999999998887654 334
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
...+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 77 LSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 56788999999999999999999999988764
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.24 E-value=9.3e-12 Score=112.73 Aligned_cols=113 Identities=21% Similarity=0.294 Sum_probs=91.0
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc-----------ccccchHHHHHHHhhhccCCCCccc
Q 009091 422 LKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR-----------YRLERDEHLYKAFQYFDKDNSGYIT 490 (544)
Q Consensus 422 ~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-----------~~~~~~~~~~~~F~~~D~d~dG~Is 490 (544)
+..+...+.......++..+|..+|.|++|.|+++||...+... ........+..+|+.+|.|++|.|+
T Consensus 26 l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~ 105 (191)
T 3khe_A 26 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIE 105 (191)
T ss_dssp HHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEE
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCC
Confidence 33333334234455789999999999999999999998877543 2234457789999999999999999
Q ss_pred HHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 491 RDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 491 ~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
.+||..++...... ..+.+..+|..+|.|+||.|+++||..++.
T Consensus 106 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 106 YSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 99999987544333 678899999999999999999999999987
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.4e-12 Score=108.06 Aligned_cols=101 Identities=13% Similarity=0.014 Sum_probs=65.5
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-cccchHHHHHHHh
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-RLERDEHLYKAFQ 479 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~~~~~~~~F~ 479 (544)
.+++|..+|.|++|.|+++||..++... .......++..+|+.+|.|++|.|+.+||...+.... .....+.+..+|+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 4578999999999999999999888763 2222356799999999999999999999988876655 2567788999999
Q ss_pred hhccCCCCcccHHHHHHHHHHcC
Q 009091 480 YFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g 502 (544)
.+|.|+||.|+.+||..++...+
T Consensus 85 ~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 85 EGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHhC
Confidence 99999999999999999998753
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=95.84 Aligned_cols=68 Identities=38% Similarity=0.583 Sum_probs=62.8
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.....++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.++...
T Consensus 17 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 345678999999999999999999999999999988 89999999999999999999999999988754
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.1e-11 Score=95.15 Aligned_cols=64 Identities=19% Similarity=0.376 Sum_probs=58.5
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
....++.+|+.||+|+||+|+.+|++.+|+.+|. +++++..++..+|.|+||.|+|+||+.+|.
T Consensus 7 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 7 QRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 3467889999999999999999999999999875 678999999999999999999999998874
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.3e-11 Score=104.42 Aligned_cols=100 Identities=21% Similarity=0.204 Sum_probs=87.6
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~ 513 (544)
.+++.+|..+|.|++|.|++.||...+...........+..+|..+|.+++|.|+..||..++...... .++++..+|
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF 89 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAF 89 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 356788999999999999999998877665556677889999999999999999999999988765433 678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHhc
Q 009091 514 SEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+|.|++|.|+.+||..++..
T Consensus 90 ~~~D~d~~G~I~~~El~~~l~~ 111 (148)
T 2lmt_A 90 KIFDRDGDGFISPAELRFVMIN 111 (148)
T ss_dssp HHHHSSCSSEECHHHHHHHHHH
T ss_pred HHHCCCCcCcCcHHHHHHHHHH
Confidence 9999999999999999988874
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-11 Score=114.16 Aligned_cols=133 Identities=14% Similarity=0.154 Sum_probs=95.6
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC-eeEEEEEEEeCCeEEEEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN-IVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~-iv~~~~~~~~~~~~~lv~ 174 (544)
|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+.++.. +.+++++....+..++||
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp CEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 45544344566799999864 45778999986432 12457789999999975522 667888888888899999
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---------------------------------------
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG--------------------------------------- 215 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--------------------------------------- 215 (544)
||++|.+|. . .... ...++.+++..|..||+..
T Consensus 95 e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 95 GEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp ECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred EecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 999998883 1 1122 1255666777777777643
Q ss_pred -------------------CEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 216 -------------------VMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 216 -------------------ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
++|+|++|.|||++. +..+.|+|||.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~---~~~~~liD~~~a~ 213 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVEN---GRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEET---TEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEEC---CcEEEEEcchhcc
Confidence 999999999999953 3356799999875
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.2e-11 Score=97.83 Aligned_cols=66 Identities=20% Similarity=0.507 Sum_probs=57.5
Q ss_pred chHHHHHHHhhhc-cCCC-CcccHHHHHHHHHH-cC----CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFD-KDNS-GYITRDELETAMKD-YG----IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D-~d~d-G~Is~~el~~~l~~-~g----~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....++.+|+.|| +||| |+|+.+||+.+|.. +| .. ++++++++|+++|.|+||.|+|+||+.+|..
T Consensus 11 ~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 11 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 3467899999998 7886 89999999999986 54 33 7899999999999999999999999998763
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.23 E-value=4.1e-11 Score=97.65 Aligned_cols=95 Identities=21% Similarity=0.171 Sum_probs=80.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---ccccchHHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRLERDEHLYKA 477 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~~~~~~~~~~ 477 (544)
++..+|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||...+... ........+..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 3566677778 89999999999887542 3467889999999999999999999998887654 334567889999
Q ss_pred HhhhccCCCCcccHHHHHHHHH
Q 009091 478 FQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 478 F~~~D~d~dG~Is~~el~~~l~ 499 (544)
|+.+|.|++|.|+.+||..++.
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 86 LADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998774
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.6e-11 Score=104.57 Aligned_cols=101 Identities=20% Similarity=0.173 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~ 513 (544)
.++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 90 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 346788999999999999999998887665555677889999999999999999999999998764222 557889999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|.|++|.|+.+||..++...
T Consensus 91 ~~~D~d~~G~i~~~e~~~~l~~~ 113 (147)
T 4ds7_A 91 KVFDKNGDGLISAAELKHVLTSI 113 (147)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHT
T ss_pred HHhCCCCCCeECHHHHHHHHHHc
Confidence 99999999999999999998754
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.9e-11 Score=99.56 Aligned_cols=66 Identities=20% Similarity=0.558 Sum_probs=59.1
Q ss_pred chHHHHHHHhhhc-cCCCC-cccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFD-KDNSG-YITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+.++.+|+.|| +|+|| +|+.+||+.+|+. +|.. +++++++++..+|.|+||.|+|+||+.+|..
T Consensus 20 ~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 20 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4567899999999 89997 9999999999986 6655 7789999999999999999999999988764
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=95.87 Aligned_cols=65 Identities=18% Similarity=0.507 Sum_probs=56.5
Q ss_pred hHHHHHHHhhhc-cCCC-CcccHHHHHHHHHH-cC----CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNS-GYITRDELETAMKD-YG----IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~d-G~Is~~el~~~l~~-~g----~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.|| +||+ |+|+.+||+.+|+. +| .. ++++++++++++|.|+||.|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 467899999998 6885 89999999999985 55 23 7889999999999999999999999998864
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.7e-11 Score=104.69 Aligned_cols=99 Identities=8% Similarity=0.084 Sum_probs=84.0
Q ss_pred hHHHHhccc-CCCCCCccCHHHHHHHHHHh------CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHH
Q 009091 401 GLKTMFANM-DTDKSGTITYEELKTGLARL------GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473 (544)
Q Consensus 401 ~l~~~F~~~-D~~~~G~I~~~e~~~~l~~~------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~ 473 (544)
++..+|..+ |.+++|.|+++||..++... ........+..+|+.+|.|++|.|+.+||...+.........+.
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 120 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE 120 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH
Confidence 366779999 99999999999999999886 45566788999999999999999999999988765544556788
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHH
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 121 VDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 99999999999999999999998875
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.6e-11 Score=96.24 Aligned_cols=63 Identities=21% Similarity=0.352 Sum_probs=58.2
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
....++.+|+.||+|+||+|+.+|++.+|+.+|. ++++++.++..+|.|+||.|+|+||+.+|
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~ 70 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 4567899999999999999999999999999875 67899999999999999999999999887
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.5e-11 Score=91.79 Aligned_cols=66 Identities=44% Similarity=0.680 Sum_probs=61.6
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+.++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 45678999999999999999999999999999987 8999999999999999999999999998864
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.21 E-value=2.2e-11 Score=105.38 Aligned_cols=101 Identities=24% Similarity=0.237 Sum_probs=85.3
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC-CC-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IG-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g-~~-~~~~~~~~~ 513 (544)
.++..+|..+|.|++|.|++.||...+...........+..+|+.+|.|++|.|+.+||..++.... .. ..+++..+|
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 89 (148)
T 1exr_A 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAF 89 (148)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHH
Confidence 3477899999999999999999988776554455677899999999999999999999998886532 11 456788899
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.|++|.|+.+||..++...
T Consensus 90 ~~~D~d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 90 KVFDRDGNGLISAAELRHVMTNL 112 (148)
T ss_dssp HHHSTTCSSCBCHHHHHHHHHHT
T ss_pred HHhCCCCCCcCCHHHHHHHHHHh
Confidence 99999999999999999998754
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-11 Score=95.36 Aligned_cols=86 Identities=31% Similarity=0.535 Sum_probs=73.0
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc---cc
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL---ER 470 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~---~~ 470 (544)
++..+.+++..+|..+|.|++|+|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+...... ..
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~ 82 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG 82 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence 345677889999999999999999999999999999999999999999999999999999999999877654332 12
Q ss_pred hHHHHHHHh
Q 009091 471 DEHLYKAFQ 479 (544)
Q Consensus 471 ~~~~~~~F~ 479 (544)
.++++.+|+
T Consensus 83 ~~~l~~aF~ 91 (92)
T 2kn2_A 83 WSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 355666664
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.20 E-value=5.4e-11 Score=96.94 Aligned_cols=100 Identities=20% Similarity=0.213 Sum_probs=81.5
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---cccc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRLE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~~ 469 (544)
.++.++ +.++|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||...+... ....
T Consensus 5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 5 ILSAED---IAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 445555 555677777 89999999999887432 3467889999999999999999999998887654 2345
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
...++..+|+.+|.|++|.|+.+||..++.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 678899999999999999999999998764
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.3e-11 Score=93.75 Aligned_cols=67 Identities=30% Similarity=0.577 Sum_probs=62.5
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
....++.+|+.+|.|++|+|+.+||+.+|..+| . ++++++.+|..+|.|+||.|+|+||+.++....
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 76 (86)
T 2opo_A 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 76 (86)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence 456789999999999999999999999999999 7 899999999999999999999999999998764
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.20 E-value=2.7e-11 Score=107.28 Aligned_cols=101 Identities=28% Similarity=0.304 Sum_probs=86.6
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~ 513 (544)
.++..+|..+|.|++|.|+..||...+...........+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|
T Consensus 28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 107 (169)
T 3qrx_A 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAF 107 (169)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 457889999999999999999998887655555677889999999999999999999999988653221 356788999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|.|++|.|+.+||..++...
T Consensus 108 ~~~D~d~~G~i~~~el~~~l~~~ 130 (169)
T 3qrx_A 108 RLFDDDNSGTITIKDLRRVAKEL 130 (169)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHT
T ss_pred HHhCCCCCCcCCHHHHHHHHHHc
Confidence 99999999999999999998754
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-11 Score=109.19 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=80.6
Q ss_pred HHHHHHHHhc-CCCCCceeeehhhhhhhhccc----cccchHHHH-----------HHHhhhccCCCCcccHHHHHHHHH
Q 009091 436 TEVKQLMDAA-DVDGNGTIDYIEFISATMHRY----RLERDEHLY-----------KAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 436 ~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~----~~~~~~~~~-----------~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
.++..+|..+ |.|++|.|+++||...+.... .......+. .+|+.+|.|++|.|+.+||..++.
T Consensus 8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 87 (185)
T 2sas_A 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE 87 (185)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence 4688999999 999999999999977665433 233333343 449999999999999999999887
Q ss_pred HcCC---------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 500 DYGI---------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 500 ~~g~---------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.... . ....+..+|..+|.|+||.|+++||..++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 133 (185)
T 2sas_A 88 KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133 (185)
T ss_dssp HHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS
T ss_pred HHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 6421 1 3478899999999999999999999999864
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.9e-11 Score=108.78 Aligned_cols=99 Identities=22% Similarity=0.189 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISE 515 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~ 515 (544)
.++..+|..+|.|++|.|+.+||...+........ ..+..+|+.+|.|++|.|+.+||..++.......++.+..+|..
T Consensus 52 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~ 130 (191)
T 3k21_A 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRV 130 (191)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHH
Confidence 45788999999999999999999888755433333 67889999999999999999999998754433467899999999
Q ss_pred hCCCCCcceeHHHHHHHHhc
Q 009091 516 VDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 516 ~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|.|+||.|+.+||..++..
T Consensus 131 ~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 131 FDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp HSTTCSSCBCHHHHHHHHHH
T ss_pred hCCCCCCcCCHHHHHHHHHh
Confidence 99999999999999999976
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-11 Score=96.87 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=79.4
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---ccccchHHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRLERDEHLYKA 477 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~~~~~~~~~~ 477 (544)
++.++|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||...+... .......++..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 86 (109)
T 1bu3_A 11 DVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAF 86 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHH
Confidence 3556677777 89999999999887542 3457889999999999999999999998887654 334567889999
Q ss_pred HhhhccCCCCcccHHHHHHHHH
Q 009091 478 FQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 478 F~~~D~d~dG~Is~~el~~~l~ 499 (544)
|+.+|.|+||.|+.+||..++.
T Consensus 87 ~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 87 LKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998764
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.9e-11 Score=111.96 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=90.5
Q ss_pred ccCHHHHHHHHHHhCCCCCHHH---HHHHHHhcCCC--CCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCccc
Q 009091 416 TITYEELKTGLARLGSKLSETE---VKQLMDAADVD--GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490 (544)
Q Consensus 416 ~I~~~e~~~~l~~~~~~~~~~~---~~~~~~~~D~d--~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is 490 (544)
.++.+++..+....+. +..+ +..+|..+|.| ++|.|+.+||...+.. ........+..+|+.+|.|++|.|+
T Consensus 27 ~l~~~~~~~l~~~~~l--s~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~ 103 (226)
T 2zfd_A 27 SGGLGDPELLARDTVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILG 103 (226)
T ss_dssp -----CTHHHHHHSSC--CHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBC
T ss_pred cCCHHHHHHHHHhCCC--CHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCc
Confidence 4555777766665543 4443 56788899999 9999999999887754 2223345677899999999999999
Q ss_pred HHHHHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 491 RDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 491 ~~el~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
.+||..++...+.. ..+.+..+|..+|.|+||.|+++||..++.
T Consensus 104 ~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 149 (226)
T 2zfd_A 104 FEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149 (226)
T ss_dssp HHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 99999999887643 567899999999999999999999999985
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.19 E-value=4.3e-11 Score=104.97 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=87.0
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CC-CCHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GI-GDEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~-~~~~~~~~~~ 513 (544)
.++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++... .. ...+.+..+|
T Consensus 23 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 102 (161)
T 3fwb_A 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF 102 (161)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 347789999999999999999998887665555677889999999999999999999999988653 22 2567899999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|.|++|.|+.+||..++...
T Consensus 103 ~~~D~d~~G~i~~~el~~~l~~~ 125 (161)
T 3fwb_A 103 QLFDDDHTGKISIKNLRRVAKEL 125 (161)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHT
T ss_pred HHHcCCCCCeEeHHHHHHHHHHh
Confidence 99999999999999999998753
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.6e-11 Score=91.28 Aligned_cols=66 Identities=29% Similarity=0.625 Sum_probs=61.3
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 34678899999999999999999999999999988 8889999999999999999999999998865
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-11 Score=118.18 Aligned_cols=99 Identities=25% Similarity=0.278 Sum_probs=85.1
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIIS 514 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~~ 514 (544)
+++.+|+.+|.|++|.|+.+||..++.......+..++..+|+.+|.|++|.|+.+||..++...-.. .++++.++|+
T Consensus 303 ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk 382 (440)
T 3u0k_A 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFR 382 (440)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 46789999999999999999998887665556678899999999999999999999999888654222 5678999999
Q ss_pred HhCCCCCcceeHHHHHHHHhc
Q 009091 515 EVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 515 ~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+|.|++|.|+.+||..+|..
T Consensus 383 ~fDkDgdG~IS~eELr~vL~~ 403 (440)
T 3u0k_A 383 VFDKDGNGYISAAELRHVMTN 403 (440)
T ss_dssp HHCTTCSSEECHHHHHHHHHH
T ss_pred HHCCCCcCcCCHHHHHHHHHH
Confidence 999999999999999998875
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.4e-11 Score=104.15 Aligned_cols=103 Identities=21% Similarity=0.301 Sum_probs=85.7
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhc-cccccchHHHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMH-RYRLERDEHLYKAF 478 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~-~~~~~~~~~~~~~F 478 (544)
.+..+|..+|.|++|.|+++||..++...... .....+..+|+.+|.|++|.|+.+||...+.. .........+..+|
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 35568889999999999999999999887544 44577999999999999999999999888765 23344556666666
Q ss_pred hh----hccCCCCcccHHHHHHHHHHcCC
Q 009091 479 QY----FDKDNSGYITRDELETAMKDYGI 503 (544)
Q Consensus 479 ~~----~D~d~dG~Is~~el~~~l~~~g~ 503 (544)
+. +|.|+||.|+.+||..++..++.
T Consensus 119 ~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 147 (155)
T 3ll8_B 119 DKTIINADKDGDGRISFEEFCAVVGGLDI 147 (155)
T ss_dssp HHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence 66 99999999999999999988765
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-11 Score=124.96 Aligned_cols=126 Identities=25% Similarity=0.300 Sum_probs=100.9
Q ss_pred cccCCCCCCccCHHHHHHHHHHhCCCCCH---HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhcc
Q 009091 407 ANMDTDKSGTITYEELKTGLARLGSKLSE---TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDK 483 (544)
Q Consensus 407 ~~~D~~~~G~I~~~e~~~~l~~~~~~~~~---~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~ 483 (544)
..+|.+.+|.|...++...... .++. .++..+|+.+|.|++|.|+.+||..++.........+.++.+|+.+|.
T Consensus 283 k~iD~de~g~i~~~e~~~~~~~---~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~ 359 (450)
T 3sg6_A 283 KGIDFKEDGNILGHKLEYNTRD---QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 359 (450)
T ss_dssp EEESCCTTSTTTTTCBCCC------CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCT
T ss_pred ccCCccccccchhhhhhhhhcc---cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcc
Confidence 4578888898887765432211 2333 468899999999999999999998887665555677889999999999
Q ss_pred CCCCcccHHHHHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 484 DNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 484 d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
|++|.|+.+||..++...-.. ..+.+..+|+.+|.|+||.|+.+||..+|..
T Consensus 360 DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~ 413 (450)
T 3sg6_A 360 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 413 (450)
T ss_dssp TSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 999999999999988764322 6778999999999999999999999999875
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.4e-11 Score=107.79 Aligned_cols=102 Identities=25% Similarity=0.260 Sum_probs=87.0
Q ss_pred HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHH
Q 009091 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEI 512 (544)
Q Consensus 435 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~ 512 (544)
..++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++...... ..+.+..+
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~ 89 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA 89 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHH
Confidence 3567899999999999999999998887655455667889999999999999999999999988654221 45678899
Q ss_pred HHHhCCCCCcceeHHHHHHHHhcC
Q 009091 513 ISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 513 ~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
|..+|.|++|.|+.+||..++...
T Consensus 90 F~~~D~d~~G~I~~~E~~~~l~~~ 113 (179)
T 2f2o_A 90 FRVFDKDGNGYISAAELRHVMTNL 113 (179)
T ss_dssp HHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHhCCCCCCcCcHHHHHHHHHHh
Confidence 999999999999999999998754
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=95.17 Aligned_cols=103 Identities=22% Similarity=0.284 Sum_probs=83.4
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---cc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YR 467 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~ 467 (544)
+..++..+ +..+|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||...+... ..
T Consensus 4 G~~~t~~e---~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~ 76 (110)
T 1pva_A 4 KDLLKADD---IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR 76 (110)
T ss_dssp HHHSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC
T ss_pred cccCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCC
Confidence 33455555 555677777 8899999999988742 23467889999999999999999999998887654 33
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
....+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 77 ~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 77 DLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 456788999999999999999999999988753
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.18 E-value=6e-11 Score=93.54 Aligned_cols=68 Identities=41% Similarity=0.732 Sum_probs=62.8
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
....++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.++....
T Consensus 7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~ 75 (92)
T 2kn2_A 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR 75 (92)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 45678999999999999999999999999999987 899999999999999999999999999887543
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.7e-11 Score=107.82 Aligned_cols=97 Identities=18% Similarity=0.280 Sum_probs=83.3
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISE 515 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~ 515 (544)
.++..+|..+|.|++|.|+++||...+.... .....+..+|+.+|.|++|.|+.+||..++.......++.+..+|..
T Consensus 39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~ 116 (180)
T 3mse_B 39 KYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNK 116 (180)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 5688999999999999999999988775432 23578999999999999999999999998876544455789999999
Q ss_pred hCCCCCcceeHHHHHHHHh
Q 009091 516 VDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 516 ~d~~~dg~i~~~eF~~~~~ 534 (544)
+|.|++|.|+.+||..++.
T Consensus 117 ~D~d~~G~I~~~El~~~l~ 135 (180)
T 3mse_B 117 IDKDEDGYISKSDIVSLVH 135 (180)
T ss_dssp HCTTCSSCBCHHHHHHHTT
T ss_pred HCCCCCCCCCHHHHHHHHc
Confidence 9999999999999999987
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.18 E-value=2e-11 Score=110.37 Aligned_cols=100 Identities=22% Similarity=0.240 Sum_probs=86.7
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIIS 514 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~ 514 (544)
.++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++..+... ..+.+..+|.
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 89 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFS 89 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 357899999999999999999998877655445567889999999999999999999999988766543 4567899999
Q ss_pred HhCCCCCcceeHHHHHHHHhc
Q 009091 515 EVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 515 ~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+|.|++|.|+.+||..++..
T Consensus 90 ~~D~d~dG~Is~~El~~~l~~ 110 (188)
T 1s6i_A 90 YFDKDGSGYITLDEIQQACKD 110 (188)
T ss_dssp HTTTTCSSEEEHHHHHHTTTT
T ss_pred HHCCCCCCcCcHHHHHHHHHH
Confidence 999999999999999998764
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.9e-11 Score=94.72 Aligned_cols=65 Identities=15% Similarity=0.448 Sum_probs=58.6
Q ss_pred hHHHHHHHhhhc-cCCCC-cccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNSG-YITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.|| +|++| +|+.+||+.+|+. +|.. ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467899999997 89998 9999999999986 5655 8899999999999999999999999988764
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.17 E-value=4.8e-11 Score=93.71 Aligned_cols=75 Identities=35% Similarity=0.547 Sum_probs=69.6
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 390 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+...+++++++++..+|..||.|++|+|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+..+..
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 455688899999999999999999999999999999999999999999999999999999999999999877653
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.17 E-value=6.9e-11 Score=103.35 Aligned_cols=99 Identities=11% Similarity=0.112 Sum_probs=85.5
Q ss_pred HHHHHHHhcC-CCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC------CCHHHH
Q 009091 437 EVKQLMDAAD-VDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI------GDEASI 509 (544)
Q Consensus 437 ~~~~~~~~~D-~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~------~~~~~~ 509 (544)
++..+|..+| .|++|.|+.+||...+...........+..+|+.+|.|++|.|+.+||..++..... .....+
T Consensus 14 ~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 93 (158)
T 2jnf_A 14 LLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQEL 93 (158)
T ss_dssp HHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTH
T ss_pred HHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHH
Confidence 4678999999 999999999999888765544556788999999999999999999999999876532 234578
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 510 KEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 510 ~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+|..+|.|++|.|+.+||..++..
T Consensus 94 ~~~F~~~D~d~~G~I~~~el~~~l~~ 119 (158)
T 2jnf_A 94 REAFRLYDKEGNGYISTDVMREILAE 119 (158)
T ss_dssp HHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 99999999999999999999999875
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-11 Score=112.58 Aligned_cols=100 Identities=20% Similarity=0.243 Sum_probs=77.9
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc--ccccchHHHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR--YRLERDEHLYKAF 478 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~--~~~~~~~~~~~~F 478 (544)
++..+|..+|.|++|.|+++||..++.........+.+..+|+.+|.|++|.|+.+||...+... ......+.+..+|
T Consensus 94 ~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~ 173 (197)
T 3pm8_A 94 DIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLL 173 (197)
T ss_dssp HHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHH
Confidence 46778999999999999999999877655445567889999999999999999999998887654 2334567899999
Q ss_pred hhhccCCCCcccHHHHHHHHHH
Q 009091 479 QYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~ 500 (544)
+.+|.|+||.|+.+||..+|..
T Consensus 174 ~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 174 QEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp HHHCTTCSSSEEHHHHHHHHHC
T ss_pred HHHcCCCCCcCcHHHHHHHHHc
Confidence 9999999999999999998864
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.17 E-value=4.5e-11 Score=91.05 Aligned_cols=64 Identities=28% Similarity=0.634 Sum_probs=60.0
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.++.+|+.+|.|++|+|+.+||+.++..+| . ++++++.++..+|.|+||.|+|+||+.++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 4688999999999999999999999999999 6 89999999999999999999999999998764
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.5e-11 Score=97.51 Aligned_cols=84 Identities=14% Similarity=0.267 Sum_probs=70.3
Q ss_pred eeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHH
Q 009091 452 TIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFC 530 (544)
Q Consensus 452 ~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~ 530 (544)
.++++++...+.... ......++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.++..+|.|+||.|+|+||+
T Consensus 5 ~~~~~~~~~~l~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 5 ATADRDILARLHKAV-TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TTCCHHHHHHHHHHH-HHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred chhHHHHHHHHHHHH-HchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 355666665554332 2345789999999999999999999999999999988 89999999999999999999999999
Q ss_pred HHHhcC
Q 009091 531 TMMRSG 536 (544)
Q Consensus 531 ~~~~~~ 536 (544)
.+|...
T Consensus 84 ~~~~~~ 89 (105)
T 1wlz_A 84 SRFSSE 89 (105)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 998854
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.16 E-value=4e-11 Score=105.84 Aligned_cols=99 Identities=21% Similarity=0.248 Sum_probs=84.8
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISE 515 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~ 515 (544)
++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|..
T Consensus 28 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 107 (166)
T 2aao_A 28 GLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTY 107 (166)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHH
Confidence 46789999999999999999998877665445566789999999999999999999999888654322 45789999999
Q ss_pred hCCCCCcceeHHHHHHHHhc
Q 009091 516 VDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 516 ~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|.|++|.|+.+||..++..
T Consensus 108 ~D~d~~G~i~~~e~~~~l~~ 127 (166)
T 2aao_A 108 FDKDGSGYITPDELQQACEE 127 (166)
T ss_dssp HCTTCSSSBCHHHHHHHTCC
T ss_pred hCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999998764
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.4e-11 Score=106.85 Aligned_cols=101 Identities=21% Similarity=0.196 Sum_probs=88.3
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~ 513 (544)
.+++.+|..+|.|++|.|+++||..++.......+...+..+|..+|.|++|.|+..||..++...... .++++..+|
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF 90 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 90 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHH
Confidence 357889999999999999999998887665566778899999999999999999999999888665443 567899999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.|++|.|+.+||..+|...
T Consensus 91 ~~fD~d~~G~I~~~el~~~l~~~ 113 (176)
T 2lhi_A 91 KVFDKNGDGLISAAELKHVLTSI 113 (176)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHTT
T ss_pred HHhCCCCCCcCcHHHHHHHHHHc
Confidence 99999999999999999998754
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.16 E-value=5.2e-11 Score=103.31 Aligned_cols=99 Identities=19% Similarity=0.268 Sum_probs=85.4
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC------CHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG------DEASIK 510 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~------~~~~~~ 510 (544)
++..+|..+|.|++|.|+++||...+...........+..+|+.+|.|++|.|+.+||..++...... ..+.+.
T Consensus 12 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T 3ox6_A 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELR 91 (153)
T ss_dssp HHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHH
Confidence 46788999999999999999998887665555677889999999999999999999999998654332 256789
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 511 EIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 511 ~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+|..+|.|++|.|+.+||..++..
T Consensus 92 ~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 92 DAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999999875
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.16 E-value=2e-11 Score=104.96 Aligned_cols=97 Identities=23% Similarity=0.257 Sum_probs=49.3
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCC-----CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc--------cc
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGS-----KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY--------RL 468 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~--------~~ 468 (544)
-...|..+|.|++|.|+.+||..++..+.. ....+++..+|+.+|.|++|.|+++||...+.... ..
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 446899999999999999999998877522 13356789999999999999999999988775431 11
Q ss_pred cchHHH----HHHHhhhccCCCCcccHHHHHHHH
Q 009091 469 ERDEHL----YKAFQYFDKDNSGYITRDELETAM 498 (544)
Q Consensus 469 ~~~~~~----~~~F~~~D~d~dG~Is~~el~~~l 498 (544)
...+++ ..+|+.+|.|+||+|+.+||..++
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 223333 667799999999999999998765
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.16 E-value=6.7e-11 Score=107.10 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=81.2
Q ss_pred HHHHHHHHhc-CCCCCceeeehhhhhhhhcc----ccccchHHHHHHH-----------hhhccCCCCcccHHHHHHHHH
Q 009091 436 TEVKQLMDAA-DVDGNGTIDYIEFISATMHR----YRLERDEHLYKAF-----------QYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 436 ~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~----~~~~~~~~~~~~F-----------~~~D~d~dG~Is~~el~~~l~ 499 (544)
.++..+|..+ |.|++|.|+++||...+... ........+..+| +.+|.|+||.|+.+||..++.
T Consensus 12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence 4578999999 99999999999998776543 2233445555565 999999999999999999887
Q ss_pred HcCC---------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 500 DYGI---------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 500 ~~g~---------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.... . ....+..+|..+|.|+||.|+++||..++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~ 137 (191)
T 2ccm_A 92 ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS 137 (191)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHT
T ss_pred HHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 6521 1 3567889999999999999999999998864
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.2e-11 Score=96.26 Aligned_cols=63 Identities=21% Similarity=0.349 Sum_probs=58.7
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
...++.+|+.+|+|+||+|+.+|++.+|+.+|. +++++.+++..+|.|+||.|+|+||+.+|.
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l-~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~ 72 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 457899999999999999999999999999875 688999999999999999999999999886
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-11 Score=90.56 Aligned_cols=62 Identities=21% Similarity=0.368 Sum_probs=57.3
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 3578999999999999999999999998876 7889999999999999999999999999865
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.16 E-value=7.2e-11 Score=103.59 Aligned_cols=101 Identities=26% Similarity=0.292 Sum_probs=85.7
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-----CHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-----DEASIK 510 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-----~~~~~~ 510 (544)
.++..+|..+|.|++|.|++.||...+...........+..+|+.+|.|++|.|+.+||..++...... ..+.+.
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 99 (162)
T 1top_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELA 99 (162)
T ss_dssp HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHH
Confidence 457789999999999999999998887655445567889999999999999999999999988654211 346788
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 511 EIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 511 ~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.+|..+|.|++|.|+.+||..++...
T Consensus 100 ~~F~~~D~d~~G~I~~~e~~~~l~~~ 125 (162)
T 1top_A 100 NCFRIFDKNADGFIDIEELGEILRAT 125 (162)
T ss_dssp HHHHHHCTTCSSCBCHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 89999999999999999999998754
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.16 E-value=8.1e-11 Score=92.74 Aligned_cols=64 Identities=16% Similarity=0.429 Sum_probs=58.3
Q ss_pred hHHHHHHHhhhccCCCC---cccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSG---YITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG---~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.|| ++|| +|+.+||+.+|.. +|.. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 8 VVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 357889999999 7777 9999999999999 8877 8999999999999999999999999998764
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.14 E-value=6.1e-11 Score=93.99 Aligned_cols=65 Identities=17% Similarity=0.493 Sum_probs=54.4
Q ss_pred hHHHHHHHhhhc-cCC-CCcccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDN-SGYITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~-dG~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.|| +|+ +|+|+.+||+.+|+. +|.. ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 467889999999 798 589999999999986 4555 6789999999999999999999999988764
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=94.46 Aligned_cols=63 Identities=27% Similarity=0.346 Sum_probs=57.1
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+.++.+|+.||+|+||+|+.+||+.+|. +.. +++++..+|..+|.|+||.|+|+||+.+|.
T Consensus 12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 12 SRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 356788999999999999999999999998 444 788999999999999999999999998874
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.1e-11 Score=98.29 Aligned_cols=65 Identities=22% Similarity=0.373 Sum_probs=58.7
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
.....++.+|+.||+|+||+|+.+||+.+|+.+|. +++++++++..+|.|+||.|+|+||+.+|.
T Consensus 19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl-~~~el~~i~~~~D~d~dG~I~~~EF~~~m~ 83 (110)
T 1iq3_A 19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKL-SIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSC-SSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 34578999999999999999999999999988875 456899999999999999999999998875
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.1e-11 Score=90.98 Aligned_cols=71 Identities=37% Similarity=0.634 Sum_probs=65.9
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+++++++++..+|..+|.|++|+|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+..+..
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46678889999999999999999999999999999999999999999999999999999999999877653
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=99.14 E-value=4.2e-11 Score=91.95 Aligned_cols=68 Identities=31% Similarity=0.561 Sum_probs=62.0
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC-CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g-~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.....++ +|+.+|.|++|+|+.+||+.+|..+| .. ++++++.+|..+|.|+||.|+|+||+.++....
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 75 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSK 75 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 3457789 99999999999999999999999999 77 899999999999999999999999999998754
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.14 E-value=2e-10 Score=100.22 Aligned_cols=99 Identities=12% Similarity=0.139 Sum_probs=86.5
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCC--CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGS--KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
+..+ ..+|.+++|.|+++||..++..... .....++..+|+.+|.|++|.|+.+||..++...........+..+|+
T Consensus 49 ~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~ 127 (156)
T 1wdc_C 49 VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 127 (156)
T ss_dssp HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 5556 8899999999999999999988754 556788999999999999999999999988765544556788999999
Q ss_pred h--hccCCCCcccHHHHHHHHHHc
Q 009091 480 Y--FDKDNSGYITRDELETAMKDY 501 (544)
Q Consensus 480 ~--~D~d~dG~Is~~el~~~l~~~ 501 (544)
. +|.|++|.|+.+||..++...
T Consensus 128 ~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 128 LTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp HHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred HhCCCCCCCCcEeHHHHHHHHhcC
Confidence 9 999999999999999998764
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=99.61 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC--CC-CHHHH
Q 009091 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IG-DEASI 509 (544)
Q Consensus 433 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--~~-~~~~~ 509 (544)
++.+++..+|..+|.|++|.|+.+||...+...........+..+|+. |++|.|+.+||..++.... .. ....+
T Consensus 2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 78 (145)
T 2bl0_B 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEM 78 (145)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHH
Confidence 466779999999999999999999998877655445567788888887 8899999999999987653 22 56789
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 510 KEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 510 ~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|..+|.|++|.|+.+||..++...
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~ 105 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNL 105 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 999999999999999999999998754
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=116.84 Aligned_cols=142 Identities=23% Similarity=0.374 Sum_probs=104.2
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEe--eccccChhcHHHHHHHHHHHHhccC-CCCeeEEEEEEEeC---CeEEE
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSIL--KRKLVNKQDREDIKREIQIMQHLSG-QQNIVEFRGAYEDR---QSVHL 172 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~--~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~~---~~~~l 172 (544)
.+.|+.|.++.||++... +..+++|+.. .... ......+.+|+.+++.|.. +..+++++.++.+. +..++
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 467899999999998754 4678888764 2211 1223567889999999974 24578888888766 45899
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF--------------------------------------- 213 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~--------------------------------------- 213 (544)
||||++|.++.+.. ...++......++.+++.+|..||+
T Consensus 119 vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999998774411 2346788888999999999999997
Q ss_pred -------------------cCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 214 -------------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 214 -------------------~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
..++|+|+++.|||+..++. ..+.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-RVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-CEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-cEEEEECcccccc
Confidence 36899999999999965432 3468999998763
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.8e-11 Score=99.57 Aligned_cols=63 Identities=24% Similarity=0.571 Sum_probs=57.0
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
.+.++.+|+.||.| +|+||.+||+.+|+. +|.. ++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~ 82 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA 82 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 46788999999988 899999999999976 5666 788999999999999999999999999875
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.14 E-value=4.4e-11 Score=94.83 Aligned_cols=65 Identities=20% Similarity=0.399 Sum_probs=58.2
Q ss_pred hHHHHHHHhhhc-cCCCC-cccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNSG-YITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.|| +|++| +|+.+||+.+|+. +|.. ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 457899999999 89998 9999999999986 5555 7889999999999999999999999998764
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=7.9e-11 Score=107.75 Aligned_cols=101 Identities=15% Similarity=0.180 Sum_probs=83.9
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCC-----------------CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGS-----------------KLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-----------------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+..+|..+|.|++|.|+++||..++..... .....++..+|+.+|.|++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 667899999999999999999999987653 344677999999999999999999999988765
Q ss_pred c-ccccchHHHHHHHhh----hccCCCCcccHHHHHHHHHHcC
Q 009091 465 R-YRLERDEHLYKAFQY----FDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 465 ~-~~~~~~~~~~~~F~~----~D~d~dG~Is~~el~~~l~~~g 502 (544)
. ......+.+..+|+. +|.|+||.|+.+||..++...+
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (202)
T 2bec_A 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD 185 (202)
T ss_dssp SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence 4 333455666666666 9999999999999999886653
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.5e-10 Score=93.31 Aligned_cols=63 Identities=16% Similarity=0.331 Sum_probs=57.6
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
....++.+|+.+|+ +||+|+.+|++.+|..+|. +++++.+++..+|.|+||.|+|+||+.+|.
T Consensus 13 e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl-~~~el~~i~~~~D~d~dG~id~~EF~~~m~ 75 (106)
T 1eh2_A 13 DKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDEFAVAMF 75 (106)
T ss_dssp HHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTC-CHHHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 34678899999999 9999999999999999875 678999999999999999999999998876
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-10 Score=96.45 Aligned_cols=63 Identities=21% Similarity=0.263 Sum_probs=58.5
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
....++.+|+.|| |+||+|+.+|++.+|+.+|. +++++.+++..+|.|+||.|+|+||+.+|.
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl-~~~el~~I~~~~D~d~dG~Ld~~EF~~am~ 111 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKL-PNTVLGKIWKLADVDKDGLLDDEEFALANH 111 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCc-CHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4678999999999 99999999999999999875 678999999999999999999999998875
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=91.42 Aligned_cols=65 Identities=23% Similarity=0.437 Sum_probs=59.8
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....++.+|+.+|.|++|+|+.+||+.+|..+|. ++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 25 ELARLRSVFAACDANRSGRLEREEFRALCTELRV-RPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCc-CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 4467899999999999999999999999999984 7789999999999999999999999998864
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.11 E-value=6.6e-11 Score=95.42 Aligned_cols=65 Identities=15% Similarity=0.343 Sum_probs=57.1
Q ss_pred hHHHHHHHhhhc-cCCC-CcccHHHHHHHHHH-cCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNS-GYITRDELETAMKD-YGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~d-G~Is~~el~~~l~~-~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.|| +|++ |+|+.+||+.+|+. +|.. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 467899999999 7997 79999999999986 6743 3478999999999999999999999998764
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=92.53 Aligned_cols=65 Identities=17% Similarity=0.350 Sum_probs=56.2
Q ss_pred hHHHHHHHhhhccCC---CCcccHHHHHHHHHHcC-CC-----CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDN---SGYITRDELETAMKDYG-IG-----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~---dG~Is~~el~~~l~~~g-~~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.||.++ +|+|+.+||+.+|...+ .. ++++++++|+++|.|+||.|+|+||+.+|..
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 467899999999964 79999999999998743 21 3688999999999999999999999998864
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.11 E-value=9.6e-11 Score=91.09 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=61.5
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHH---HHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS---IKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~---~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.....++.+|+.||.|++|+|+.+||+.+|..+|.. ++.+ +..++..+|.|++|.|+| ||+.++...
T Consensus 11 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~ 81 (86)
T 1j7q_A 11 EEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW 81 (86)
T ss_dssp THHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence 345678999999999999999999999999999988 8889 999999999999999999 999988753
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=92.09 Aligned_cols=68 Identities=21% Similarity=0.299 Sum_probs=62.5
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++.++++++.++|..||.|++|+|+.+|+..++..++ ++.+++..++..+|.|+||.|+|+||+..+.
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 5678889999999999999999999999999999986 5789999999999999999999999987653
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=105.31 Aligned_cols=101 Identities=21% Similarity=0.305 Sum_probs=78.3
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCC-------CCCHHHHH----HHHHhcCCCCCceeeehhhhhhhhcccccc
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGS-------KLSETEVK----QLMDAADVDGNGTIDYIEFISATMHRYRLE 469 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-------~~~~~~~~----~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~ 469 (544)
.+..+|..+|.|++|.|+++||..++..+.. ....+.+. .+|+.+|.|++|.|+.+||..++.......
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~ 146 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISP 146 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 4778899999999999999999998766421 11112233 899999999999999999988876544445
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDY 501 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~ 501 (544)
..+.+..+|+.+|.|+||.|+.+||..++..+
T Consensus 147 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 178 (195)
T 1qv0_A 147 SQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF 178 (195)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 67889999999999999999999999888654
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=99.10 E-value=5.7e-11 Score=128.50 Aligned_cols=124 Identities=10% Similarity=0.199 Sum_probs=102.9
Q ss_pred ccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhc-------CCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 408 NMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA-------DVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 408 ~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~-------D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
.||.|+||.|+.+|+...+...+. ...++..+++.. |.+++|.|+|+||+.++.... ...+++.+|+.
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~~~~--~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~ 237 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSKDKD--DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKE 237 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCSCHH--HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHHHhcCC--hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHH
Confidence 479999999999999998775421 135688888887 577889999999998876532 34589999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCC-----------CHHHHHHHHHHhCC--C----CCcceeHHHHHHHHhcCC
Q 009091 481 FDKDNSGYITRDELETAMKDYGIG-----------DEASIKEIISEVDT--D----NDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~-----------~~~~~~~~~~~~d~--~----~dg~i~~~eF~~~~~~~~ 537 (544)
||.|++|.|+. ||+.+|...+.. +++++.++|..++. + ++|.|++++|.++|.+..
T Consensus 238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~~ 310 (816)
T 3qr0_A 238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEE 310 (816)
T ss_dssp HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSGG
T ss_pred HccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhccc
Confidence 99999999999 999999998632 47889999999887 5 789999999999998653
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=8.3e-11 Score=122.96 Aligned_cols=101 Identities=22% Similarity=0.264 Sum_probs=89.0
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
.++.++|..+|.|++|.|+++||..++.......+.+++..+|+.+|.|+||.|+++||...+.. .....++++.+|+
T Consensus 382 ~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~ 459 (484)
T 3nyv_A 382 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLS 459 (484)
T ss_dssp HHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHH
Confidence 56788999999999999999999999887755556788999999999999999999999887754 3446778999999
Q ss_pred hhccCCCCcccHHHHHHHHHHcC
Q 009091 480 YFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g 502 (544)
.+|.|+||.|+.+||..++..+.
T Consensus 460 ~~D~d~dG~i~~~Ef~~~~~~~~ 482 (484)
T 3nyv_A 460 EVDKNNDGEVDFDEFQQMLLKLC 482 (484)
T ss_dssp HHCTTCCSEEEHHHHHHHHHHTT
T ss_pred HhcCCCCCcCCHHHHHHHHHhhh
Confidence 99999999999999999998753
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=7e-11 Score=123.79 Aligned_cols=103 Identities=21% Similarity=0.249 Sum_probs=90.1
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F 478 (544)
..++.++|..+|.|++|.|+++||..++.......+.+++..+|+.+|.|+||.|+++||...+.. .....+.+..+|
T Consensus 389 ~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~ 466 (494)
T 3lij_A 389 ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMI 466 (494)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHH
Confidence 356788999999999999999999998876655667889999999999999999999999887754 344567899999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCC
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGI 503 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~ 503 (544)
+.+|.|+||.|+.+||..++..++.
T Consensus 467 ~~~D~d~dG~I~~~EF~~~~~~~~~ 491 (494)
T 3lij_A 467 SGIDSNNDGDVDFEEFCKMIQKLCS 491 (494)
T ss_dssp HTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred HHhCCCCCCcCCHHHHHHHHHhhcc
Confidence 9999999999999999999988764
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.5e-10 Score=97.59 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=86.1
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhh---ccCCCCcccHHHHHHHHHHc---CCC-CHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYF---DKDNSGYITRDELETAMKDY---GIG-DEAS 508 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~---D~d~dG~Is~~el~~~l~~~---g~~-~~~~ 508 (544)
.++..+|..+|.|++|.|++.||...+...........+..+|+.+ |.|+ |.|+.+||..++... ... ....
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~ 86 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFED 86 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHH
Confidence 4578899999999999999999988776554455678899999999 9999 999999999998775 222 5678
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 509 IKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 509 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+..+|..+|.|++|.|+.+||..++...
T Consensus 87 ~~~~F~~~D~d~~G~i~~~el~~~l~~~ 114 (149)
T 2mys_C 87 FVEGLRVFDKEGNGTVMGAELRHVLATL 114 (149)
T ss_pred HHHHHHHhCCCCCceEcHHHHHHHHHHh
Confidence 9999999999999999999999998753
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=105.32 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=81.7
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCC-------CCCHHHHH----HHHHhcCCCCCceeeehhhhhhhhcccccc
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGS-------KLSETEVK----QLMDAADVDGNGTIDYIEFISATMHRYRLE 469 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~-------~~~~~~~~----~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~ 469 (544)
.+..+|..+|.|++|.|+++||..++..+.. ....+.+. .+|+.+|.|++|.|+.+||..++.......
T Consensus 63 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~ 142 (191)
T 1uhk_A 63 AVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQ 142 (191)
T ss_dssp HHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 4778899999999999999999998776421 11112233 899999999999999999988775544445
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
..+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 143 ~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~ 173 (191)
T 1uhk_A 143 SSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173 (191)
T ss_dssp SHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 6788999999999999999999999988865
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=92.49 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=62.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++.++++++.++|..||.|++|+|+.+|+..++..++ ++..++..+|+.+|.|+||.|+|+||+.++.
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 5677889999999999999999999999999999886 6789999999999999999999999987653
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.09 E-value=8.6e-11 Score=93.60 Aligned_cols=67 Identities=15% Similarity=0.322 Sum_probs=59.9
Q ss_pred HHHhhHHHHhcccC-CCCC-CccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 397 EEIKGLKTMFANMD-TDKS-GTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 397 ~~~~~l~~~F~~~D-~~~~-G~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..+.++.++|..|| .|++ |+|+.+||+.+++. ++...+..++..+++.+|.|+||.|+|+||+..+.
T Consensus 7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~ 80 (101)
T 3nso_A 7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLA 80 (101)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 45678999999997 8887 99999999999996 46778899999999999999999999999987664
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.4e-10 Score=92.88 Aligned_cols=67 Identities=22% Similarity=0.406 Sum_probs=62.6
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
....++.+|+.||.|++|+|+.+||+.+|..+|.. ++++++.++..+|.|+||.|+|+||+.++...
T Consensus 30 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 44678999999999999999999999999999988 89999999999999999999999999998764
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.08 E-value=9.4e-11 Score=101.62 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=84.5
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccC--CCCcccHHHHHHHHHHcCCC----CHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKD--NSGYITRDELETAMKDYGIG----DEASI 509 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d--~dG~Is~~el~~~l~~~g~~----~~~~~ 509 (544)
.++..+|..+|.|++|.|+++||...+...........+..+|+.+|.| ++|.|+.+||..++...... ..+.+
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l 89 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 89 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHH
Confidence 3478999999999999999999988776554455678899999999999 99999999999999876431 34567
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 510 KEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 510 ~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|..+|.|++|.|+.+||..++...
T Consensus 90 ~~~F~~~D~d~~G~I~~~el~~~l~~~ 116 (151)
T 1w7j_B 90 LEGFRVFDKEGNGKVMGAELRHVLTTL 116 (151)
T ss_dssp HHHHHTTCTTSSSEEEHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 889999999999999999999998753
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-10 Score=106.03 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=82.5
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhcccc--ccchHHHHHHH-------hhhccCCCCcccHHHHHHHHH-------
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYR--LERDEHLYKAF-------QYFDKDNSGYITRDELETAMK------- 499 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~--~~~~~~~~~~F-------~~~D~d~dG~Is~~el~~~l~------- 499 (544)
.++..+|..+|.|++|.|+++||...+..... ......+..+| +.+|.|++|.|+.+||..++.
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 115 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAER 115 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhh
Confidence 35789999999999999999999887754333 45566777777 999999999999999999886
Q ss_pred --HcCCC--CHHH-HHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 500 --DYGIG--DEAS-IKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 500 --~~g~~--~~~~-~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+... ..++ +..+|..+|.|+||.|+.+||..++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 156 (208)
T 2hpk_A 116 ERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKA 156 (208)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred hhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 44322 3334 788999999999999999999999865
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.08 E-value=1e-10 Score=122.96 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=89.3
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
.++..+|..+|.|++|.|+++||..++.......+.+++..+|+.+|.|+||.|+.+||...+.. .....+++..+|+
T Consensus 399 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~ 476 (504)
T 3q5i_A 399 EEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLG 476 (504)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHH
Confidence 45788999999999999999999998876655567889999999999999999999999887654 3356788999999
Q ss_pred hhccCCCCcccHHHHHHHHHHcCC
Q 009091 480 YFDKDNSGYITRDELETAMKDYGI 503 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g~ 503 (544)
.+|.|+||.|+.+||..+|...+.
T Consensus 477 ~~D~d~dG~I~~~EF~~~~~~~~~ 500 (504)
T 3q5i_A 477 EADQNKDNMIDFDEFVSMMHKICD 500 (504)
T ss_dssp TTCSSCSSSEEHHHHHHHHHHHC-
T ss_pred HhCCCCCCcEeHHHHHHHHHHhcc
Confidence 999999999999999999988753
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1e-10 Score=122.39 Aligned_cols=103 Identities=19% Similarity=0.296 Sum_probs=76.2
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F 478 (544)
.+++..+|..+|.|++|.|+++||..++.......+.+++..+|+.+|.|+||.|+.+||...+.........+++..+|
T Consensus 380 ~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~ 459 (486)
T 3mwu_A 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESII 459 (486)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 34678899999999999999999998887777777889999999999999999999999988776544445667889999
Q ss_pred hhhccCCCCcccHHHHHHHHHHc
Q 009091 479 QYFDKDNSGYITRDELETAMKDY 501 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~ 501 (544)
+.+|.|+||.|+.+||..++..+
T Consensus 460 ~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 460 EQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHhCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999999999998764
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.08 E-value=7.6e-11 Score=91.66 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=66.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHH---HHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE---VKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~---~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
..+++++++++..+|..||.|++|+|+..||..++..+|..++..+ +..+|..+|.|++|.|+| ||+..+..
T Consensus 6 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 4577888999999999999999999999999999999999999999 999999999999999999 99876643
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.6e-10 Score=91.01 Aligned_cols=65 Identities=22% Similarity=0.495 Sum_probs=57.5
Q ss_pred hHHHHHHHhhhc-cCCCC-cccHHHHHHHHHH---cCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNSG-YITRDELETAMKD---YGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~---~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.|| +|++| +|+.+||+.+|+. +|..++.+++.++..+|.|+||.|+|+||+.++..
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 467899999999 99999 9999999999987 33346678999999999999999999999998864
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.07 E-value=5.8e-11 Score=96.73 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=78.5
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---ccccchHHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRLERDEHLYKA 477 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~~~~~~~~~~ 477 (544)
++.++|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||...+... ......+.+..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2kyc_A 10 DIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTF 85 (108)
T ss_dssp HHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHH
T ss_pred HHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 4667788888 89999999999887422 2345678999999999999999999998887654 233456778999
Q ss_pred HhhhccCCCCcccHHHHHHHHH
Q 009091 478 FQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 478 F~~~D~d~dG~Is~~el~~~l~ 499 (544)
|+.+|.|++|.|+.+||..++.
T Consensus 86 ~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 86 LAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp HTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHhCCCCCCcCCHHHHHHHHh
Confidence 9999999999999999998775
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.9e-10 Score=90.52 Aligned_cols=71 Identities=24% Similarity=0.453 Sum_probs=64.2
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
...++.++++++..+|..+|.|++|+|+.+||..++..+| .+..++..+|..+|.|++|.|+|+||+..+.
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 3456788889999999999999999999999999999998 6889999999999999999999999987654
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-10 Score=95.07 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=63.1
Q ss_pred HHHhhHHHHhcccCC-CCCC-ccCHHHHHHHHH-HhCCC-----CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc
Q 009091 397 EEIKGLKTMFANMDT-DKSG-TITYEELKTGLA-RLGSK-----LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL 468 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~-~~~G-~I~~~e~~~~l~-~~~~~-----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~ 468 (544)
++++++.++|..||. |++| +|+.+||..+++ .++.. .+..++..+|+.+|.|+||.|+|+||+.++....
T Consensus 9 ~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~-- 86 (113)
T 1xk4_C 9 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT-- 86 (113)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH--
Confidence 456789999999995 9999 999999999999 67743 5789999999999999999999999998775432
Q ss_pred cchHHHHHHHhhhccCCCCcc
Q 009091 469 ERDEHLYKAFQYFDKDNSGYI 489 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~I 489 (544)
......|...| +++|.=
T Consensus 87 ---~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 ---WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp ---HHHHC-------------
T ss_pred ---HHHHHHHhhCC-CCCccc
Confidence 34566788888 888853
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.6e-10 Score=111.43 Aligned_cols=182 Identities=15% Similarity=0.225 Sum_probs=122.5
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCC--eeEEEEEEEeCC---eEEEEE
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN--IVEFRGAYEDRQ---SVHLVM 174 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~--iv~~~~~~~~~~---~~~lv~ 174 (544)
+.++.|....||++. ..+++|+... ......+.+|+.+|+.+..+.. +.+++......+ ..|+||
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~-----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKH-----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESS-----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCC-----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 458999999999863 4688887521 2345678899999998853332 445555543333 347899
Q ss_pred eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 009091 175 ELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF----------------------------------------- 213 (544)
Q Consensus 175 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~----------------------------------------- 213 (544)
|+++|.+|..... ..++......++.+++..|..||+
T Consensus 96 ~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 96 TKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp ECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 9999988865433 346777778888888888888885
Q ss_pred -----------------cCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCceecccCCccc---cCccccc---
Q 009091 214 -----------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY---VAPEVLR--- 270 (544)
Q Consensus 214 -----------------~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y---~aPE~~~--- 270 (544)
..++|+|++|.|||++.++ ...+.|+||+.+....... .......+ ..|+...
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~-~~~~~~iD~~~~~~~~~~~---Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK-NTICGIIDFGDAAISDPDN---DFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT-TEEEEECCCTTCEEECTTH---HHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC-CCEEEEEeCCCCccCChHH---HHHHHHhhccccCHHHHHHHH
Confidence 2369999999999996531 3467899999986543211 11111111 2333221
Q ss_pred ccCCC------------cchHHHHHHHHHHHhhCCCCCC
Q 009091 271 RSYGK------------EIDVWSAGVILYILLSGVPPFW 297 (544)
Q Consensus 271 ~~~~~------------~~DiwslG~~l~el~tg~~pf~ 297 (544)
..|.. ..+.|++|.++|.+.+|..+|.
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11221 2589999999999999988773
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=99.05 E-value=1.1e-10 Score=89.98 Aligned_cols=65 Identities=32% Similarity=0.487 Sum_probs=58.6
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcC--CC-CHHHHHH----HHHHhCCCCCcceeHHHHHHHHh
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IG-DEASIKE----IISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--~~-~~~~~~~----~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+.++.+|+.+|.|++|+|+.+||+.++..+| .. ++++++. +|..+|.|+||.|+|+||+..+.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~ 76 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA 76 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence 345789999999999999999999999999999 65 7778888 99999999999999999997765
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.3e-10 Score=84.11 Aligned_cols=63 Identities=24% Similarity=0.505 Sum_probs=58.8
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++.++|..+|.|++|+|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999987664
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.2e-10 Score=90.45 Aligned_cols=65 Identities=22% Similarity=0.539 Sum_probs=60.2
Q ss_pred hHHHHHHHhhhc-cCCCC-cccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFD-KDNSG-YITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D-~d~dG-~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.|| +|++| +|+.+||+.+|.. +|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 467899999999 79999 9999999999998 8877 8999999999999999999999999998864
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.5e-10 Score=92.92 Aligned_cols=69 Identities=22% Similarity=0.375 Sum_probs=61.9
Q ss_pred hHHHHhhHHHHhcccC-CCCCC-ccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 395 SEEEIKGLKTMFANMD-TDKSG-TITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D-~~~~G-~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
...+++++.++|..|| .|++| +|+.+||..++.. ++..+++.++..+++.+|.|+||.|+|+||+..+.
T Consensus 17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~ 92 (113)
T 2lnk_A 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 92 (113)
T ss_dssp HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4566788999999999 89997 9999999999987 67778889999999999999999999999987764
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.5e-10 Score=100.28 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=78.6
Q ss_pred HhcccCCCCCCc-cCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-----ccchHHHH--
Q 009091 405 MFANMDTDKSGT-ITYEELKTGLARLGSKLS-ETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-----LERDEHLY-- 475 (544)
Q Consensus 405 ~F~~~D~~~~G~-I~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-----~~~~~~~~-- 475 (544)
+|..+|.|++|. |+++||..++..+..... ..++..+|+.+|.|++|.|+.+||..++..... ....+.+.
T Consensus 65 l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~ 144 (183)
T 1dgu_A 65 ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQL 144 (183)
T ss_dssp HHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHH
Confidence 566689999999 999999999988754434 468999999999999999999999887754322 23444555
Q ss_pred --HHHhhhccCCCCcccHHHHHHHHHH
Q 009091 476 --KAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 476 --~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
.+|+.+|.|+||.|+.+||..++..
T Consensus 145 ~~~~~~~~D~d~dG~I~~~EF~~~~~~ 171 (183)
T 1dgu_A 145 IDNILEESDIDRDGTINLSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 4999999999999999999988754
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2e-10 Score=86.77 Aligned_cols=66 Identities=33% Similarity=0.643 Sum_probs=59.4
Q ss_pred chHHHHHHHhhh-ccCCC-CcccHHHHHHHHHHcCCC---CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYF-DKDNS-GYITRDELETAMKDYGIG---DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~-D~d~d-G~Is~~el~~~l~~~g~~---~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+.++.+|+.+ |+|++ |+|+.+||+.+|..+|.. ++++++.++..+|.|+||.|+|+||+.++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 356789999999 99999 999999999999998753 5678999999999999999999999998864
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-10 Score=92.42 Aligned_cols=68 Identities=24% Similarity=0.365 Sum_probs=62.1
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
+++++++++.++|..||.|++|+|+.+||..++. +..++..++..+|+.+|.|+||.|+|+||+..+.
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 5677888999999999999999999999999998 5678899999999999999999999999987653
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6e-10 Score=96.21 Aligned_cols=66 Identities=23% Similarity=0.416 Sum_probs=61.3
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 46 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 112 (147)
T 1wy9_A 46 KLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG 112 (147)
T ss_dssp HHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 45678999999999999999999999999999987 8999999999999999999999999998865
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-10 Score=84.35 Aligned_cols=65 Identities=34% Similarity=0.624 Sum_probs=60.5
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.+++..+|..+|.|++|+|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+..+.
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 45688999999999999999999999999999999999999999999999999999999987653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 544 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-91 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-85 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-84 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 7e-84 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-83 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-80 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-80 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 8e-78 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 5e-77 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-75 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-75 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-75 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-75 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-73 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-70 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-69 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-69 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 8e-69 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-68 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-68 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-67 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 6e-64 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-63 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-63 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-62 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-62 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-61 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-61 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-60 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-60 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-59 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-59 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-59 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-57 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 4e-57 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 7e-57 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 9e-56 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-55 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-55 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-55 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-55 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-55 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-55 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-54 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-54 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-54 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-53 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-53 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 9e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-50 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 7e-50 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 8e-50 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 9e-50 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-48 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-48 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-47 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-46 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 6e-45 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-45 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-43 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-42 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 7e-42 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 6e-32 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 2e-09 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-31 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-31 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 8e-30 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-09 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-29 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 1e-29 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 5e-10 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 3e-29 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 1e-28 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 5e-27 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 1e-26 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 8e-11 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 2e-26 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 3e-26 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-11 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 6e-26 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 5e-15 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-06 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 6e-25 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 3e-10 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-24 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 4e-12 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 1e-24 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 4e-24 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 7e-24 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-13 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 7e-24 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 9e-05 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 8e-24 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 5e-13 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 2e-23 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 7e-09 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 3e-23 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 6e-07 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 3e-05 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 4e-23 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-09 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 1e-04 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 4e-23 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 2e-08 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 2e-04 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 7e-23 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 1e-11 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 1e-22 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 1e-16 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-21 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 0.003 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 2e-21 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 4e-06 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 2e-21 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 1e-14 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-21 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 3e-20 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 4e-11 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 7e-20 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 2e-19 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 2e-14 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 9e-19 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 3e-12 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 1e-18 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 1e-18 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 2e-13 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 1e-07 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 2e-18 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 0.001 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-18 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-12 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 4e-18 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 0.002 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 7e-18 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 5e-05 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 0.004 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 1e-17 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 3e-06 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 2e-17 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 1e-15 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 1e-07 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 7e-17 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 4e-12 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 1e-07 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 1e-16 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 2e-16 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 9e-13 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 3e-05 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 2e-16 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-12 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 2e-09 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 3e-16 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-11 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 6e-16 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-14 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 2e-15 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 1e-08 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-15 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 7e-15 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-07 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 2e-15 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 1e-10 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 4e-15 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 6e-10 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 5e-15 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 6e-15 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 2e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 0.003 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 3e-14 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 4e-14 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-14 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-09 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 4e-14 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 5e-14 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 8e-14 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 4e-07 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 1e-13 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 9e-09 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-13 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-08 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 2e-13 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 2e-11 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 2e-04 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 3e-13 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 9e-11 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 7e-13 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 3e-10 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 1e-12 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 4e-08 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 3e-12 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 4e-05 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 7e-12 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 8e-06 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-11 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-06 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 9e-11 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-09 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 6e-04 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-09 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-05 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-09 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 7e-09 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 0.001 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 6e-09 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 8e-09 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 6e-09 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 8e-09 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 3e-08 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 4e-06 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 9e-04 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 4e-07 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 8e-04 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 3e-06 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 0.001 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 6e-06 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 0.001 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 8e-06 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 0.003 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 4e-05 | |
| d2pula1 | 392 | d.144.1.6 (A:5-396) Methylthioribose kinase MtnK { | 4e-05 | |
| d1sraa_ | 151 | a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPAR | 2e-04 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 280 bits (717), Expect = 3e-91
Identities = 122/299 (40%), Positives = 173/299 (57%), Gaps = 5/299 (1%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K EDIR Y LG G F L + T A K I K+ L K+ ++ EI
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS--MENEIA 59
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++ + NIV YE ++L+M+L SGGELFD+I+ +G YTE+ A+ L +++
Sbjct: 60 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 118
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H +G++HRDLKPEN L + D + + +DFGLS D G V G+ YVAP
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 178
Query: 267 EVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
EVL + Y K +D WS GVI YILL G PPF+ E + +F+ ILK +F+S W ISD
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 238
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
SAKD +R ++ +DP+KR T + L+HPW+ G A DK I +V ++K+ A +K K+
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 296
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 266 bits (681), Expect = 1e-85
Identities = 83/306 (27%), Positives = 158/306 (51%), Gaps = 12/306 (3%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+++ + Y + ++LGRG+FGI + C E S+ +Y K + + D+ +K+EI I+
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILN 56
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVV 208
+NI+ ++E + + ++ E SG ++F++I E+ + + +
Sbjct: 57 IAR-HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
H + H D++PEN + + +K +FG + + G +R + + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSS-TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 269 LRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ D+WS G ++Y+LLSG+ PF AET + I + I+ F+ E + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMAL 387
D V ++L+++ K R+T++E L+HPW+++ E + + V+ +K R + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 388 KVIAEA 393
++ A
Sbjct: 291 NMVVSA 296
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 263 bits (673), Expect = 3e-84
Identities = 89/331 (26%), Positives = 158/331 (47%), Gaps = 28/331 (8%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
+ +Y + +ELG G FG+ + C E +TG + K I D+ +K EI IM
Sbjct: 26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQ 82
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVH 209
L ++ A+ED+ + L++E SGGELFD+I A+ + +E R +
Sbjct: 83 LH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 141
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H H ++H D+KPEN + K +K DFGL+ ++ ++ + +A + APE++
Sbjct: 142 HMHEHSIVHLDIKPENIMCETKKAS-SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV 200
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R G D+W+ GV+ Y+LLSG+ PF E + + + +F+ + + +S AK
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGE---------------------ASDKPIGS 367
D ++ +L ++P+KR+T + LEHPW++ +D P
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQ 320
Query: 368 AVLSRMKQFRAMNKLKKMALKVIAEALSEEE 398
+ R+ F ++ K + ++ +E
Sbjct: 321 PAIGRIANFSSLRKHRPQEYQIYDSYFDRKE 351
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 262 bits (671), Expect = 7e-84
Identities = 97/301 (32%), Positives = 151/301 (50%), Gaps = 9/301 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+ + Y + +ELG G FG+ + TE +TGN++A K ++ ++ D+E +++EIQ M
Sbjct: 22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMS 78
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVV 208
L +V A+ED + ++ E SGGELF+K+ + +E A R + +
Sbjct: 79 VLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
H H +H DLKPEN + + K LK DFGL+ +D + + G+A + APEV
Sbjct: 138 CHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 196
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ G D+WS GV+ YILLSG+ PF E + + + + + IS+
Sbjct: 197 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 256
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMAL 387
KD +RK+L+ DP R+T + LEHPW+ G SR + R K K A
Sbjct: 257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS--QIPSSRYTKIRDSIKTKYDAW 314
Query: 388 K 388
Sbjct: 315 P 315
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 258 bits (659), Expect = 4e-83
Identities = 97/274 (35%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN------KQDREDIKREIQIMQ 149
Y + LGRG + C T YA K I + ++ RE +E+ I++
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+SG NI++ + YE LV +L GELFD + + +EK + RA++ V+
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 124
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H + ++HRDLKPEN LL + +K TDFG S +D G+ R++ G+ Y+APE++
Sbjct: 125 ALHKLNIVHRDLKPENILLDDDM---NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 181
Query: 270 -------RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G F S W
Sbjct: 182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 241
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
SD+ KDLV + L+ P+KR T+ E L HP+ ++
Sbjct: 242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 251 bits (641), Expect = 1e-80
Identities = 81/262 (30%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 66
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 67 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 126
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE++ R +
Sbjct: 127 VIHRDIKPENLLLGSAG---ELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISRL 238
Query: 335 LIQDPKKRITSAEVLEHPWMRE 356
L +P +R EVLEHPW+
Sbjct: 239 LKHNPSQRPMLREVLEHPWITA 260
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 251 bits (641), Expect = 3e-80
Identities = 105/272 (38%), Positives = 164/272 (60%), Gaps = 6/272 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD---REDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAM-LKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 245 bits (627), Expect = 8e-78
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 18/312 (5%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+D + ++ +E+G G FG Y + A K + + + +DI +E++ +Q
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L N +++RG Y + LVME C G + + E AA+ + +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRD+K N LLS ++K DFG + + + VG+ Y++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPG---LVKLGDFGSASIMAPANSF---VGTPYWMAPEVI 183
Query: 270 RRS----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
Y ++DVWS G+ L PP + I + + + S+
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSE 241
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKM 385
++ V L + P+ R TS +L+H ++ + ++ R K A+ +L +
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVL---RERPPTVIMDLIQRTKD--AVRELDNL 296
Query: 386 ALKVIAEALSEE 397
+ + + L +E
Sbjct: 297 QYRKMKKILFQE 308
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 244 bits (623), Expect = 5e-77
Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 19/320 (5%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
I + + LG G G T +A K + QD +RE+++
Sbjct: 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRA 61
Query: 152 SGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIV 205
S +IV YE+ R+ + +VME GGELF +I +G +TE+ A+ + ++I
Sbjct: 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 121
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ + H + + HRD+KPEN L ++K A+LK TDFG + + YYVA
Sbjct: 122 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 181
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPW 320
PEVL Y K D+WS GVI+YILL G PPF++ G+ I G +F + W
Sbjct: 182 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 241
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
+S+ K L+R +L +P +R+T E + HPW+ + + P+ ++ + + + R +
Sbjct: 242 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWED 301
Query: 381 KLKKMALKVIAEALSEEEIK 400
++M + + E+IK
Sbjct: 302 VKEEMTSALATMRVDYEQIK 321
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 239 bits (610), Expect = 1e-75
Identities = 78/278 (28%), Positives = 136/278 (48%), Gaps = 11/278 (3%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
+ D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM 71
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 72 RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPE 267
H V+HRD+K +N LL +K TDFG I E +VG+ Y++APE
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
V+ ++YG ++D+WS G++ ++ G PP+ E I G E + +S
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAI 245
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
+D + + L D +KR ++ E+L+H +++ S
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 237 bits (607), Expect = 2e-75
Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 12/267 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ E+IK+EI I + L+ +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLN-HE 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG---KVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ ++ + G+ YVAPE+L+R
Sbjct: 124 ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P+ ++ + K + PW I + L
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 239
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREG 357
+ K+L+++P RIT ++ + W +
Sbjct: 240 LHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 238 bits (608), Expect = 2e-75
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 18/271 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI---DEGKVYRDIVGSAYYVAPEVLR-R 271
++HRDLKPEN LL+ ++ TDFG + + + VG+A YV+PE+L +
Sbjct: 129 IIHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 241
Query: 332 RKMLIQDPKKRITSAE------VLEHPWMRE 356
K+L+ D KR+ E + HP+
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 237 bits (606), Expect = 5e-75
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 19/283 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
+ F+ + ELG G FG Y T A K I + ++++ ED EI I+
Sbjct: 9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 65
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII-AQGHYTEKAAAALCRAIVNVVH 209
NIV+ A+ ++ +++E C+GG + ++ + TE +C+ ++ ++
Sbjct: 66 CD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEV 268
+ H ++HRDLK N L + +K DFG+S RD +G+ Y++APEV
Sbjct: 125 YLHDNKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 181
Query: 269 L------RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
+ R Y + DVWS G+ L + PP + I K ++P
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SR 240
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
S + KD ++K L ++ R T++++L+HP++ S+KPI
Sbjct: 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT---VDSNKPI 280
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 232 bits (592), Expect = 3e-73
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 12/267 (4%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F E+GRG F Y + T A + RKL K +R+ K E ++++ L
Sbjct: 10 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-H 67
Query: 155 QNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
NIV F ++E ++ + LV EL + G L + K + CR I+ +
Sbjct: 68 PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF 127
Query: 211 CHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
H ++HRDLK +N ++ G +K D GL+ + ++G+ ++APE+
Sbjct: 128 LHTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATL-KRASFAKAVIGTPEFMAPEM 184
Query: 269 LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
Y + +DV++ G+ + + + P+ + GV + + K
Sbjct: 185 YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVK 243
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
+++ + Q+ +R + ++L H + +
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (578), Expect = 2e-70
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L K LG+G FG +L T +A K++ K ++ D E E +++
Sbjct: 4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+ ++ ++++ VME +GG+L I + + A I+ + H G
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPEVLR-RSY 273
+++RDLK +N L D +K DFG+ G+ Y+APE+L + Y
Sbjct: 124 IVYRDLKLDNIL---LDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
+D WS GV+LY +L G PF + E+ +F +I + + AKDL+ K
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----LEKEAKDLLVK 236
Query: 334 MLIQDPKKRITSA-EVLEHPWMRE 356
+ +++P+KR+ ++ +HP RE
Sbjct: 237 LFVREPEKRLGVRGDIRQHPLFRE 260
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 222 bits (567), Expect = 2e-69
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 21/271 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G G +G S G K L + + +++ + E+ +++ L
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLRELK-HP 63
Query: 156 NIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVH 209
NIV + DR ++++VME C GG+L I + + E+ + + +
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 210 HCHFMG-----VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYRDIVGSAYY 263
CH V+HRDLKP N L K +K DFGL+ ++ + VG+ YY
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYY 180
Query: 264 VAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
++PE + R SY ++ D+WS G +LY L + +PPF A ++K + I +G +
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-- 238
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
SD +++ +ML R + E+LE+P
Sbjct: 239 -SDELNEIITRMLNLKDYHRPSVEEILENPL 268
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 221 bits (563), Expect = 7e-69
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 23/276 (8%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED---IKRE 144
PLE Y +G LG G FG Y S A K + K ++ + + + + E
Sbjct: 1 PLES---QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 57
Query: 145 IQIMQHLSGQ-QNIVEFRGAYEDRQSVHLVMELCSGG-ELFDKIIAQGHYTEKAAAALCR 202
+ +++ +S ++ +E S L++E +LFD I +G E+ A +
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY 262
++ V HCH GV+HRD+K EN L+ G LK DFG + + Y D G+
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTV-YTDFDGTRV 174
Query: 263 YVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR-- 226
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 227 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 222 bits (567), Expect = 8e-69
Identities = 67/303 (22%), Positives = 119/303 (39%), Gaps = 49/303 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ ELG G G+ + + +G A K I + R I RE+Q++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECN-SP 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM- 214
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
+MHRD+KP N L++++ +K DFG+S + + VG+ Y++PE L+ Y
Sbjct: 125 KIMHRDVKPSNILVNSRG---EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGTHY 180
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEK---GIFDAILKGGVDFESE------------ 318
+ D+WS G+ L + G P K +F ++G
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240
Query: 319 -------------------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
P + S +D V K LI++P +R +++ H +
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300
Query: 354 MRE 356
++
Sbjct: 301 IKR 303
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 219 bits (560), Expect = 2e-68
Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 7/266 (2%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG+ LG G +L + A K + + +RE Q L+
Sbjct: 9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 67
Query: 156 NIVEFRGAYEDRQS----VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
IV E ++VME G L D + +G T K A + ++
Sbjct: 68 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 127
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFG-LSVFIDEGKVYRDIVGSAYYVAPEVLR 270
H G++HRD+KP N ++S + ++ ++ + ++G+A Y++PE R
Sbjct: 128 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 187
Query: 271 -RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
S DV+S G +LY +L+G PPF ++ + ++ S +S
Sbjct: 188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 247
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMR 355
+V K L ++P+ R +A + +R
Sbjct: 248 VVLKALAKNPENRYQTAAEMRADLVR 273
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 219 bits (560), Expect = 6e-68
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + + LG G FG +L G YA K + K +V + E E ++ ++
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ G ++D Q + ++M+ GGELF + + A + + + H
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
+++RDLKPEN LL D +K TDFG + ++ + V + G+ Y+APEV+ + Y
Sbjct: 125 IIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYN 179
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K ID WS G+++Y +L+G PF+ ++ IL + F ++ KDL+ ++
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF----FNEDVKDLLSRL 235
Query: 335 LIQDPKKRI-----TSAEVLEHPWMRE 356
+ +D +R+ + +V HPW +E
Sbjct: 236 ITRDLSQRLGNLQNGTEDVKNHPWFKE 262
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 219 bits (558), Expect = 5e-67
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 14/270 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+++ + +GRG FG Y C + TG YA K + K+++ KQ E ++ +S
Sbjct: 6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65
Query: 156 --NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
IV A+ + +++L +GG+L + G ++E I+ + H H
Sbjct: 66 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 125
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR-- 271
V++RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++
Sbjct: 126 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQKGV 181
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+Y D +S G +L+ LL G PF K I + + E S + L+
Sbjct: 182 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRSLL 240
Query: 332 RKMLIQDPKKRITS-----AEVLEHPWMRE 356
+L +D +R+ EV E P+ R
Sbjct: 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (530), Expect = 6e-64
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
T+G+ +G G FG Y + A K +L Q + K E+ +++
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGD---VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTR-HV 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NI+ F G Y + +V + C G L+ + I + + + R + + H
Sbjct: 65 NILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 124 SIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 271 ---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE--SEPWLLISD 325
Y + DV++ G++LY L++G P+ + ++ G S+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEH 351
+ K L+ + L + +R ++L
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (531), Expect = 2e-63
Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 15/268 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ K LG+G FG L E +TG YA K + K ++ K + E +++Q+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HP 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+ + A++ + VME +GGELF + + +TE+ A IV+ + + H
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPEVLRRS-Y 273
V++RD+K EN +L +K TDFGL +G + G+ Y+APEVL + Y
Sbjct: 126 VVYRDIKLENLMLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G+ +D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 238
Query: 334 MLIQDPKKRITSA-----EVLEHPWMRE 356
+L +DPK+R+ EV+EH +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (532), Expect = 2e-63
Identities = 86/342 (25%), Positives = 131/342 (38%), Gaps = 48/342 (14%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D+ YT +G G +G+ +N A K I ++ + REI+I+
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLR 62
Query: 151 LSGQQNIVEFRGA-----YEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+NI+ E + V+LV L K++ H + I+
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGAD--LYKLLKTQHLSNDHICYFLYQIL 119
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----IVGSA 261
+ + H V+HRDLKP N LL+ LK DFGL+ D + V +
Sbjct: 120 RGLKYIHSANVLHRDLKPSNLLLNTTC---DLKICDFGLARVADPDHDHTGFLTEYVATR 176
Query: 262 YYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319
+Y APE++ S Y K ID+WS G IL +LS P F + + IL E
Sbjct: 177 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236
Query: 320 WLL---------------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
A DL+ KML +P KRI + L HP
Sbjct: 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296
Query: 353 WMREGGEASDKPIGSAVLSRMKQFRAMNK--LKKMALKVIAE 392
++ + + SD+PI A + + K LK++ + A
Sbjct: 297 YLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETAR 338
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 205 bits (523), Expect = 1e-62
Identities = 70/286 (24%), Positives = 109/286 (38%), Gaps = 33/286 (11%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD--REDIKREIQIMQHLSGQQNI 157
LG GQF Y + +T A K I +D REI+++Q LS NI
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNI 62
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
+ A+ + ++ LV + T A + + + H ++
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP N LL +LK DFGL+ + Y V + +Y APE+L R YG
Sbjct: 123 HRDLKPNNLLLDENG---VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL------------- 321
+D+W+ G IL LL VP +++ I + E W
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 322 -----------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
D DL++ + + +P RIT+ + L+ +
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 285
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 206 bits (524), Expect = 1e-62
Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 17/275 (6%)
Query: 96 YTLGKELGRGQFGITYLC---TENSTGNSYACKSILKRKLVNK-QDREDIKREIQIMQHL 151
+ L K LG G +G +L + + TG YA K + K +V K + E + E Q+++H+
Sbjct: 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 85
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
+V A++ +HL+++ +GGELF + + +TE IV + H
Sbjct: 86 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 145
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID--EGKVYRDIVGSAYYVAPEVL 269
H +G+++RD+K EN LL + +G +L TDFGLS E + D G+ Y+AP+++
Sbjct: 146 HKLGIIYRDIKLENILL-DSNGHVVL--TDFGLSKEFVADETERAYDFCGTIEYMAPDIV 202
Query: 270 R---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
R + K +D WS GV++Y LL+G PF + EK I + + E +S
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 262
Query: 327 AKDLVRKMLIQDPKKRITSA-----EVLEHPWMRE 356
AKDL++++L++DPKKR+ E+ EH + ++
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 203 bits (516), Expect = 1e-61
Identities = 75/310 (24%), Positives = 121/310 (39%), Gaps = 48/310 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y ++G+G FG + TG A K +L + REI+I+Q L +
Sbjct: 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HE 69
Query: 156 NIVEFRGAYEDRQS--------VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
N+V + S ++LV + C +T + + ++N
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-----VYRDIVGSAY 262
+++ H ++HRD+K N L+ +DG +LK DFGL+ K Y + V + +
Sbjct: 130 LYYIHRNKILHRDMKAANVLI-TRDG--VLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186
Query: 263 YVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
Y PE+L R YG ID+W AG I+ + + P TE+ I + E W
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 246
Query: 321 ----------------------------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
+ A DL+ K+L+ DP +RI S + L H
Sbjct: 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306
Query: 353 WMREGGEASD 362
+ SD
Sbjct: 307 FFWSDPMPSD 316
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 203 bits (516), Expect = 4e-61
Identities = 73/337 (21%), Positives = 135/337 (40%), Gaps = 45/337 (13%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
+ K ++R Y + +G G +G + TG A K L R ++ + RE
Sbjct: 9 VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK-KLYRPFQSELFAKRAYRE 67
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQS------VHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + ++ +LVM G K++ E
Sbjct: 68 LRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQ 124
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L ++ + + H G++HRDLKP N + + LK DFGL+ D V
Sbjct: 125 FLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS--EMTGYV 179
Query: 259 GSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
+ +Y APEV+ Y + +D+WS G I+ +++G F I+K
Sbjct: 180 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239
Query: 317 SEPWLLI---------------------------SDSAKDLVRKMLIQDPKKRITSAEVL 349
+E + S A +L+ KML+ D ++R+T+ E L
Sbjct: 240 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 299
Query: 350 EHPWMREGGEASDKPIGSAVLSRMKQF-RAMNKLKKM 385
HP+ + D+P R +++ K++
Sbjct: 300 AHPYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRV 336
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 199 bits (507), Expect = 4e-60
Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L ++LGRG++ + + K + ++ IKREI+I+++L G
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKIL------KPVKKKKIKREIKILENLRGGP 90
Query: 156 NIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NI+ +D S LV E + + T+ I+ + +CH
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHS 147
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR--R 271
MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+ PE+L +
Sbjct: 148 MGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDAILKGGVD--- 314
Y +D+WS G +L ++ PF+ + + ++D I K ++
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265
Query: 315 -----------------FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
SE L+S A D + K+L D + R+T+ E +EHP+
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (503), Expect = 9e-60
Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 35/293 (11%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y E+G G +G + + G + ++ + + RE+ +++HL +
Sbjct: 9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68
Query: 156 --NIVEFRGAYEDRQS-----VHLVMELCSGGEL-FDKIIAQGHYTEKAAAALCRAIVNV 207
N+V ++ + LV E + + + + + ++
Sbjct: 69 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ H V+HRDLKP+N L+++ +K DFGL+ +V + +Y APE
Sbjct: 129 LDFLHSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSFQMALTSVVVTLWYRAPE 185
Query: 268 VLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL---- 322
VL +S Y +D+WS G I + P F ++ IL E W
Sbjct: 186 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 245
Query: 323 -------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
I + KDL+ K L +P KRI++ L HP+ ++
Sbjct: 246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (504), Expect = 2e-59
Identities = 84/344 (24%), Positives = 126/344 (36%), Gaps = 53/344 (15%)
Query: 69 KSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSIL 128
K + P Q P+ +P E YT K +G G FG+ Y +G A K +
Sbjct: 2 KVTTVVATPGQGPD----RPQEV---SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV- 53
Query: 129 KRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGG-- 180
QD+ RE+QIM+ L NIV R + +D ++LV++
Sbjct: 54 ------LQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
Query: 181 -ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239
A+ + + + H G+ HRD+KP+N LL A+LK
Sbjct: 107 RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD--TAVLKL 164
Query: 240 TDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFW 297
DFG + + G+ + S YY APE++ + Y IDVWSAG +L LL G P F
Sbjct: 165 CDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
Query: 298 AETEKGIFDAILKGGVDFESEPWL-------------------------LISDSAKDLVR 332
++ I+K E A L
Sbjct: 225 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCS 284
Query: 333 KMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376
++L P R+T E H + E + + K + F
Sbjct: 285 RLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNF 328
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 196 bits (498), Expect = 3e-59
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 34/289 (11%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +++G G +G+ Y +N+ G ++A K I K ++ REI I++ L
Sbjct: 4 YHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HS 60
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ ++ + LV E + +G A + ++N + +CH
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSAYYVAPEVLRRS-- 272
V+HRDLKP+N L++ + LK DFGL+ + Y + + +Y AP+VL S
Sbjct: 121 VLHRDLKPQNLLINREG---ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLI--------- 323
Y ID+WS G I +++G P F +E I + S+ W +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 324 ----------------SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S DL+ KML DP +RIT+ + LEH + +E
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 4e-59
Identities = 66/290 (22%), Positives = 114/290 (39%), Gaps = 34/290 (11%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +++G G +G + T A K ++ ++ REI +++ L +
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALK-RVRLDDDDEGVPSSALREICLLKELKHK- 61
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + + LV E C G + + ++ + CH
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-- 272
V+HRDLKP+N L++ LK +FGL+ F + Y V + +Y P+VL +
Sbjct: 122 VLHRDLKPQNLLINRNG---ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 273 YGKEIDVWSAGVILYILLSG-VPPFWAETEKGIFDAILKGGVDFESEPWLL--------- 322
Y ID+WSAG I L + P F I + E W
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 323 ----------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
++ + +DL++ +L +P +RI++ E L+HP+ +
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 193 bits (492), Expect = 2e-57
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 16/267 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ K LG G FG L +GN YA K + K+K+V + E E +I+Q ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FP 101
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ +++D ++++VME +GGE+F + G ++E A IV + H +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
+++RDLKPEN L+ + ++ TDFG + + + G+ +APE++ + Y
Sbjct: 162 LIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGR--TWTLCGTPEALAPEIILSKGYN 216
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K +D W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNL 272
Query: 335 LIQDPKKRITSA-----EVLEHPWMRE 356
L D KR + ++ H W
Sbjct: 273 LQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (489), Expect = 4e-57
Identities = 72/314 (22%), Positives = 126/314 (40%), Gaps = 40/314 (12%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK-KLSRPFQSIIHAKRTYRE 67
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSV----HLVMELCSGGELFDKIIAQGHYTEKAAAAL 200
+++++H+ +N++ + +S+ + + G + I+ T+ L
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
I+ + + H ++HRDLKP N + LK DFGL+ D V +
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLA---VNEDCELKILDFGLARHTD--DEMTGYVAT 181
Query: 261 AYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
+Y APE++ Y + +D+WS G I+ LL+G F IL+ +E
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 319 PWLLI---------------------------SDSAKDLVRKMLIQDPKKRITSAEVLEH 351
I + A DL+ KML+ D KRIT+A+ L H
Sbjct: 242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 352 PWMREGGEASDKPI 365
+ + + D+P+
Sbjct: 302 AYFAQYHDPDDEPV 315
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 7e-57
Identities = 65/290 (22%), Positives = 116/290 (40%), Gaps = 34/290 (11%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +++G G +G+ Y TG A K ++ + REI +++ L+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALK-KIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 156 NIVEFRGAYEDRQSVHLVMELCS-GGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV+ ++LV E + F A + ++ + CH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS- 272
V+HRDLKP+N L++ + +K DFGL+ F + Y V + +Y APE+L
Sbjct: 122 RVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 273 -YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--------- 322
Y +D+WS G I +++ F ++E I + + W
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 323 ----------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 9e-56
Identities = 60/274 (21%), Positives = 102/274 (37%), Gaps = 24/274 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+G G FG G ++ +K D D E++++ L
Sbjct: 12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGHYTEKAAAA 199
NI+ GA E R ++L +E G L D + + +
Sbjct: 72 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259
+ + + +HRDL N L+ + K DFGLS +
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRL 188
Query: 260 SAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFES 317
++A E L S Y DVWS GV+L+ ++S G P+ T +++ + +G +
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRL 245
Query: 318 EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
E L D DL+R+ + P +R + A++L
Sbjct: 246 EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 1e-55
Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 17/266 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNS---YACKSILKRKLVNKQDREDIKREIQIMQHLS 152
L ++LG G FG+ ++ A K + L + +D RE+ M L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHC 211
+N++ G + +V EL G L D++ QGH+ + + + +
Sbjct: 70 -HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY----RDIVGSAYYVAPE 267
+HRDL N LL+ +D ++K DFGL + + + + APE
Sbjct: 128 ESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 268 VLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
L+ R++ D W GV L+ + + G P+ I I K G
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED--CPQ 242
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEH 351
+++ + P+ R T + +
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 1e-55
Identities = 68/273 (24%), Positives = 103/273 (37%), Gaps = 21/273 (7%)
Query: 93 RQFYTLG-KELGRGQFGITYLCT--ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
R+ TL KELG G FG + A K ILK + + ++++ E +MQ
Sbjct: 5 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVK-ILKNEANDPALKDELLAEANVMQ 63
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L IV G E +S LVME+ G L + H +K L + +
Sbjct: 64 QLD-NPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 121
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----IVGSAYYVA 265
+ +HRDL N LL + K +DFGLS + + Y + A
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 266 PEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323
PE + + + DVWS GV+++ S G P+ + + KG
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG---ERMGCPAGC 235
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEV---LEHPW 353
DL+ D + R A V L + +
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 2e-55
Identities = 58/287 (20%), Positives = 105/287 (36%), Gaps = 36/287 (12%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLS 152
GK LG G FG T + + + L + +RE + E+++M L
Sbjct: 39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--------------------- 191
+NIV GA ++L+ E C G+L + + ++
Sbjct: 99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 158
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
T + + + F +HRDL N L+ + DFGL+ I
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKI--CDFGLARDIM 215
Query: 250 EGK---VYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304
V + ++APE L Y + DVWS G++L+ + S GV P+
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 275
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
F +++ G + + ++ +++ D +KR + +
Sbjct: 276 FYKLIQNGFKMDQPFY--ATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 185 bits (471), Expect = 4e-55
Identities = 52/278 (18%), Positives = 98/278 (35%), Gaps = 21/278 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG+++G G FG YL T+ + G A K K + E +I + + G
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV-----KTKHPQLHIESKIYKMMQGGV 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I R + +VMEL ++ K L +++ + + H
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY--------RDIVGSAYYVAPE 267
+HRD+KP+NFL+ G ++ DFGL+ + + + +++ G+A Y +
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 183
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL---- 322
+ D+ S G +L G P+ + S P +
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKG 243
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEV---LEHPWMREG 357
+ + + + + + R+G
Sbjct: 244 YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 183 bits (466), Expect = 6e-55
Identities = 54/261 (20%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
T KELG GQFG+ A K I + ++ E ++M +LS +
Sbjct: 6 LTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLS-HE 59
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKII-AQGHYTEKAAAALCRAIVNVVHHCHFM 214
+V+ G ++ + ++ E + G L + + + + + +C+ + + +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVLRRS 272
+HRDL N L+ + ++K +DFGLS ++ + + + PEVL S
Sbjct: 120 QFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + D+W+ GV+++ + S G P+ T + I +G L S+ +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG---LRLYRPHLASEKVYTI 233
Query: 331 VRKMLIQDPKKRITSAEVLEH 351
+ + +R T +L +
Sbjct: 234 MYSCWHEKADERPTFKILLSN 254
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 184 bits (469), Expect = 9e-55
Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 17/272 (6%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK-RKLVNKQDREDIKREIQIM 148
E + + +G G+FG G +I + ++ R D E IM
Sbjct: 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNV 207
N++ G V ++ E G L + G +T + R I
Sbjct: 82 GQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 140
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY------RDIVGSA 261
+ + M +HRDL N L+ + + K +DFGLS F+++
Sbjct: 141 MKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 197
Query: 262 YYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEP 319
+ APE ++ R + DVWS G++++ ++S G P+W T + + +AI + D+ P
Sbjct: 198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ---DYRLPP 254
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ + L+ +D R +++
Sbjct: 255 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 2e-54
Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 21/261 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
L + +G+G+FG L GN A K + N + E +M L
Sbjct: 9 LKLLQTIGKGEFGDVMLGDY--RGNKVAVK-----CIKNDATAQAFLAEASVMTQLR-HS 60
Query: 156 NIVEFRGA-YEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
N+V+ G E++ +++V E + G L D + ++G + + +
Sbjct: 61 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-R 271
+HRDL N L+S + + K +DFGL+ + + APE LR +
Sbjct: 121 GNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREK 175
Query: 272 SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + DVWS G++L+ + S G P+ K + + KG ++ + + ++
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDGCPPAVYEV 232
Query: 331 VRKMLIQDPKKRITSAEVLEH 351
++ D R + ++ E
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQ 253
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 2e-54
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
T +E+G GQFG+ +L + A K+I + ED E ++M LS
Sbjct: 7 LTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS-HP 60
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFM 214
+V+ G ++ + LV E G L D + Q + + +C + + +
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + + +PEV S
Sbjct: 121 CVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
Y + DVWS GV+++ + S G P+ + + + I G F L S +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 234
Query: 331 VRKMLIQDPKKRITSAEVLEH 351
+ + P+ R + +L
Sbjct: 235 MNHCWKERPEDRPAFSRLLRQ 255
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (469), Expect = 3e-54
Identities = 74/326 (22%), Positives = 130/326 (39%), Gaps = 53/326 (16%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
+G + + Y K +G G GI + + A K L R N+ + RE
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 66
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+ +M+ ++ +NI+ + E+ Q V+LVMEL Q + +
Sbjct: 67 LVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMS 122
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L ++ + H H G++HRDLKP N ++ + LK DFGL+ + V
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYV 179
Query: 259 GSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------ 311
+ YY APEV+ Y + +D+WS G I+ ++ F ++ +++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 312 --------------------------------GVDFESEPWLLISDSAKDLVRKMLIQDP 339
+SE L + A+DL+ KML+ DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
KRI+ + L+HP++ + ++
Sbjct: 300 AKRISVDDALQHPYINVWYDPAEVEA 325
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (458), Expect = 2e-53
Identities = 65/267 (24%), Positives = 97/267 (36%), Gaps = 22/267 (8%)
Query: 100 KELGRGQFGITYLCTENSTGNS--YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
ELG G FG A K + ++ K D E++ RE QIM L I
Sbjct: 15 IELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD-NPYI 71
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGV 216
V G + +++ LVME+ GG L ++ + A L + + +
Sbjct: 72 VRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 130
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD----IVGSAYYVAPEVLR-R 271
+HRDL N LL N+ K +DFGLS + Y + APE + R
Sbjct: 131 VHRDLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 187
Query: 272 SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ DVWS GV ++ LS G P+ + I +G E L
Sbjct: 188 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG---KRMECPPECPPELYAL 244
Query: 331 VRKMLIQDPKKRITSAEV---LEHPWM 354
+ I + R V + +
Sbjct: 245 MSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 5e-53
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 14/265 (5%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK-RKLVNKQDREDIKREIQIMQHL 151
R+ LG+ +G GQFG + S N +I + + RE +E M+
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHH 210
+IV+ G + V ++MELC+ GEL + + + + + +
Sbjct: 66 D-HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEV 268
+HRD+ N L+S+ D +K DFGLS ++++ Y+ ++APE
Sbjct: 124 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 269 LR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
+ R + DVW GV ++ IL+ GV PF + I G +
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPT 237
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEH 351
L+ K DP +R E+
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 9e-53
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 21/270 (7%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R+ L +LG+G FG ++ T N T A K++ E +E Q+M+ L
Sbjct: 16 RESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKP----GTMSPEAFLQEAQVMKKLR 70
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHH 210
+ +V+ + +++V E S G L D + + + + I + + +
Sbjct: 71 -HEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 128
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEV 268
M +HRDL+ N L+ + K DFGL+ I++ + + APE
Sbjct: 129 VERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 185
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
+ + DVWS G++L L + G P+ + + D + +G + +S
Sbjct: 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 242
Query: 327 AKDLVRKMLIQDPKKRITSAEVLE--HPWM 354
DL+ + ++P++R T + +
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 1e-50
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 19/264 (7%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R+ L + LG GQFG ++ N A KS+ + + E +M+ L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQ----GSMSPDAFLAEANLMKQLQ 66
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHH 210
Q +V ++++ E G L D + T + I +
Sbjct: 67 -HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--IVGSAYYVAPEV 268
+HRDL+ N L+S+ K DFGL+ I++ + + APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTL---SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
+ ++ + DVWS G++L +++ G P+ T + + +G + +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEE 238
Query: 327 AKDLVRKMLIQDPKKRITSAEVLE 350
L+R + P+ R T +
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRS 262
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (436), Expect = 7e-50
Identities = 62/286 (21%), Positives = 106/286 (37%), Gaps = 35/286 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R + GK LG G FG T ++ + A K + + +RE + E+++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKV 79
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH---------------- 191
+ +L NIV GA ++ E C G+L + + +
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+ + + + +HRDL N LL++ + K DFGL+ I
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR---ITKICDFGLARDIK 196
Query: 250 EGKVYR---DIVGSAYYVAPEVLRRSY-GKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304
Y + ++APE + E DVWS G+ L+ L S G P+
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
F ++K G S D+++ DP KR T ++++
Sbjct: 257 FYKMIKEGFRMLSPEH--APAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (436), Expect = 8e-50
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 16/264 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILK--RKLVNKQDREDIKREIQIMQHLSG 153
+ K LG G FG Y G +K R+ + + ++I E +M +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCH 212
++ G +V L+ +L G L D + + + C I +++
Sbjct: 70 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD---IVGSAYYVAPEVL 269
++HRDL N L+ +K TDFGL+ + + ++A E +
Sbjct: 129 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 270 R-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
R Y + DVWS GV ++ L++ G P+ I + KG + +
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---ERLPQPPICTIDV 242
Query: 328 KDLVRKMLIQDPKKRITSAEVLEH 351
++ K + D R E++
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIE 266
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 171 bits (433), Expect = 9e-50
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 15/260 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
T+ +LG GQ+G Y + A K++ + + + E+ +E +M+ +
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY--TEKAAAALCRAIVNVVHHCHF 213
N+V+ G +++ E + G L D + + + I + + +
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 133
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDIVGSAYYVAPEVLRR 271
+HRDL N L+ ++K DFGLS + D + + APE L
Sbjct: 134 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 272 S-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + + DVW+ GV+L+ + + + + +L+ E + +L
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG--CPEKVYEL 248
Query: 331 VRKMLIQDPKKRITSAEVLE 350
+R +P R + AE+ +
Sbjct: 249 MRACWQWNPSDRPSFAEIHQ 268
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 168 bits (426), Expect = 1e-48
Identities = 55/296 (18%), Positives = 107/296 (36%), Gaps = 43/296 (14%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKR 143
LE R +++G G FG + A K + ++ + + D +R
Sbjct: 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQR 65
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY----------- 192
E +M NIV+ G + + L+ E + G+L + + + +
Sbjct: 66 EAALMAEFD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124
Query: 193 -------------TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA 239
+ + R + + + +HRDL N L+ ++K
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKI 181
Query: 240 TDFGLSVFIDEGKVYR---DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVP 294
DFGLS I Y+ + ++ PE + + Y E DVW+ GV+L+ + S G+
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241
Query: 295 PFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
P++ + + + G + E +L+R + P R + +
Sbjct: 242 PYYGMAHEEVIYYVRDGNILACPENC---PLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 3e-48
Identities = 56/284 (19%), Positives = 108/284 (38%), Gaps = 30/284 (10%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNS-------YACKSILKRKLVNKQDREDIKREI 145
R LGK LG G FG L A K + + ++D D+ E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEM 69
Query: 146 QIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQ 189
++M+ + +NI+ GA +++++E S G L + + +
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 190 GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+ K + + + + +HRDL N L++ + + ID
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 250 EGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDA 307
K + ++APE L R Y + DVWS GV+L+ + + G P+ + +F
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 308 ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ +G + ++ ++R P +R T +++E
Sbjct: 250 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 164 bits (417), Expect = 2e-47
Identities = 47/286 (16%), Positives = 97/286 (33%), Gaps = 22/286 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +G+ +G G FG+ + T A K +R D ++ E + + L+G
Sbjct: 7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-----SDAPQLRDEYRTYKLLAGCT 61
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I ++ LV++L + ++ K A + ++ V H
Sbjct: 62 GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS 121
Query: 216 VMHRDLKPENFLLSNKD--GGAMLKATDFGLSVFIDEG--------KVYRDIVGSAYYVA 265
+++RD+KP+NFL+ + M+ DFG+ F + + +++ G+A Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL-- 322
R + D+ + G + L G P+ + G +S P
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC 241
Query: 323 --ISDSAKDLVRKMLIQDPKKRITSAEVLE--HPWMREGGEASDKP 364
+ + + + D+
Sbjct: 242 AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDEN 287
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (410), Expect = 1e-46
Identities = 56/264 (21%), Positives = 106/264 (40%), Gaps = 16/264 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILK--RKLVNKQDREDIKREIQIMQHLSG 153
T K +G G+FG Y ++ +K + ++ R D E IM S
Sbjct: 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS- 67
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCH 212
NI+ G + + ++ E G L + + G ++ + R I + +
Sbjct: 68 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA 127
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR----DIVGSAYYVAPEV 268
M +HRDL N L+ + + K +DFGLS +++ + APE
Sbjct: 128 NMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184
Query: 269 LR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
+ R + DVWS G++++ +++ G P+W + + AI G F + +
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRLPTPMDCPSA 241
Query: 327 AKDLVRKMLIQDPKKRITSAEVLE 350
L+ + Q+ +R A+++
Sbjct: 242 IYQLMMQCWQQERARRPKFADIVS 265
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 6e-45
Identities = 59/290 (20%), Positives = 122/290 (42%), Gaps = 35/290 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R+ T+ +ELG+G FG+ Y ++ A K++ + + ++R + E +
Sbjct: 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASV 76
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH----------YTEKAA 197
M+ + ++V G Q ++MEL + G+L + + +
Sbjct: 77 MKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-- 255
+ I + + + + +HRDL N ++ +K DFG++ I E YR
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKG 192
Query: 256 -DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGV-PPFWAETEKGIFDAILKGG 312
+ +++PE L+ + DVWS GV+L+ + + P+ + + + +++GG
Sbjct: 193 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 252
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE------HPWMRE 356
+ + + D +L+R +PK R + E++ P RE
Sbjct: 253 LLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 6e-45
Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 24/293 (8%)
Query: 71 SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT---ENSTGNSYACKSI 127
SA + VQ + V+ P I F + +GRG FG Y T + A KS+
Sbjct: 7 SALNPELVQAVQHVVIGPSSLIVHF---NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL 63
Query: 128 LKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELFDKI 186
++ + + E IM+ S N++ G S +V+ G+L + I
Sbjct: 64 --NRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 120
Query: 187 IAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
+ H T K + + +HRDL N +L D +K DFGL+
Sbjct: 121 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 177
Query: 246 VFIDEGKVYRD-----IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWA 298
+ + + ++A E L+ + + + DVWS GV+L+ L++ G PP+
Sbjct: 178 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237
Query: 299 ETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
I +L+G + E D +++ K + R + +E++
Sbjct: 238 VNTFDITVYLLQGRRLLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 2e-43
Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 30/284 (10%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R LGK LGRG FG + C+++ + L + + E++I+
Sbjct: 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 71
Query: 150 HLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELFDKI----------------IAQGHY 192
H+ N+V GA + + +++E C G L + + +
Sbjct: 72 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131
Query: 193 TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
T + + + +HRDL N LLS K+ ++K DFGL+ I +
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDP 188
Query: 253 VY---RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGV-PPFWAETEKGIFDA 307
Y D ++APE + R Y + DVWS GV+L+ + S P+ F
Sbjct: 189 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 248
Query: 308 ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
LK G + + + + +P +R T +E++EH
Sbjct: 249 RLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (382), Expect = 2e-42
Identities = 55/300 (18%), Positives = 98/300 (32%), Gaps = 51/300 (17%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
I + L + +G+G+FG + G A K R+ + + EI L
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML 54
Query: 152 SGQQNIVEFRGAYEDRQS----VHLVMELCSGGELFDKIIAQGHYTEKA-------AAAL 200
+NI+ F A + LV + G LFD + E A+ L
Sbjct: 55 R-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD---- 256
+ +V + HRDLK +N L+ D GL+V D D
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 257 -IVGSAYYVAPEVLRRS-------YGKEIDVWSAGVILYILLSGVPPFWAETEKG----- 303
VG+ Y+APEVL S K D+++ G++ + + +
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 304 ----------IFDAILKGGVDFESEPWLL---ISDSAKDLVRKMLIQDPKKRITSAEVLE 350
+ + + + ++R+ + R+T+ + +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 152 bits (383), Expect = 7e-42
Identities = 57/343 (16%), Positives = 119/343 (34%), Gaps = 68/343 (19%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
G+P +D R Y L ++LG G F +L + A K + +K E + E
Sbjct: 6 KGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG----DKVYTEAAEDE 59
Query: 145 IQIMQHLS----------GQQNIVEFRGAYEDRQSVHLVMEL-----CSGGELFDKIIAQ 189
I+++Q ++ G +I++ + + + + + K
Sbjct: 60 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH 119
Query: 190 GHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAML-KATDFGLSVF 247
+ + ++ + + H G++H D+KPEN L+ D L + L
Sbjct: 120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 179
Query: 248 IDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD 306
+ Y + + + Y +PEVL + +G D+WS +++ L++G F +
Sbjct: 180 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 239
Query: 307 AI--------------------------------------------LKGGVDFESEPWLL 322
L+ + + +
Sbjct: 240 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 299
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
+ D + ML DP+KR + ++ HPW+++ + +
Sbjct: 300 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 342
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 119 bits (298), Expect = 6e-32
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 381 KLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE- 437
KL+ ++ + E+ +E EI+ F + SG ++ EE K ++
Sbjct: 3 KLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASKF 60
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
+ + D +G+GTID+ EFI A R + ++ L AF +D D +GYI++ E+
Sbjct: 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEI 120
Query: 498 MKDYGI-------------GDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
++ E ++I ++DT+ DG+++ EEF +S
Sbjct: 121 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 171
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.2 bits (132), Expect = 2e-09
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 14/130 (10%)
Query: 384 KMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMD 443
K + + +F D + GTI + E L+ E ++K
Sbjct: 45 KKIYGNFFPYGDASKF--AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFS 102
Query: 444 AADVDGNGTIDYIEFISATMHRYRLER------------DEHLYKAFQYFDKDNSGYITR 491
D+DGNG I E + Y++ ++ K F+ D + G ++
Sbjct: 103 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 162
Query: 492 DELETAMKDY 501
+E K
Sbjct: 163 EEFIRGAKSD 172
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 117 bits (293), Expect = 1e-31
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
E L+EE+I K FA D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 452 TIDYIEFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASI 509
TID+ EF+S + +E L +AF+ FD+D +G I+ EL M + G + +
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 120
Query: 510 KEIISEVDTDNDGRINYEEFCTMMRS 535
E+I E D D DG INYEEF MM S
Sbjct: 121 DEMIREADIDGDGHINYEEFVRMMVS 146
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 116 bits (291), Expect = 2e-31
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
+ L+EE+I K FA D D +G+I+ EL T + LG SE EV LM+ DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 451 GTIDYIEFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508
I++ EF++ + + ++ L +AF+ FDK+ G I+ EL+ + G +A
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMR 534
+ +++ EV D G IN ++F ++
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALLS 145
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 112 bits (281), Expect = 8e-30
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 454 DYIEFISATMHRY----RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEAS 508
D+ EF+ + + + + +E L F+ FDK+ G+I +EL ++ G E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
I++++ + D +NDGRI+++EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMMEG 160
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 54.6 bits (130), Expect = 2e-09
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 371 SRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG 430
S F + +K A+ SEEE L F D + G I EEL L G
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATG 126
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFI 459
++E +++ LM +D + +G ID+ EF+
Sbjct: 127 EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 111 bits (279), Expect = 1e-29
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
K E L+EE+ K F + G+I+ +EL + LG + E+++++D D
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61
Query: 447 VDGNGTIDYIEFISATMHRYR----LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
DG+GT+D+ EF+ + + + +E L F+ FDK+ GYI +EL+ ++ G
Sbjct: 62 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121
Query: 503 IG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
E I+E++ + D +NDGRI+Y+EF M+
Sbjct: 122 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (277), Expect = 1e-29
Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
EE+ + ++ F D D +GTI +ELK + LG + + E+K+++ D +G G +++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 456 IEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEII 513
+F++ + + E + KAF+ FD D +G I+ L+ K+ G + ++E+I
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 514 SEVDTDNDGRINYEEFCTMM 533
E D D DG ++ +EF +M
Sbjct: 122 DEADRDGDGEVSEQEFLRIM 141
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.7 bits (133), Expect = 5e-10
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Query: 333 KMLIQDPKKRITSAEVLEHPWM---REGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKV 389
+ D I E+ E K I + + L M K+
Sbjct: 13 DLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKM 72
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+ EE +K F D D++G I+++ LK LG L++ E+++++D AD DG
Sbjct: 73 SEKDTKEEILK----AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 128
Query: 450 NGTIDYIEFI 459
+G + EF+
Sbjct: 129 DGEVSEQEFL 138
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 3e-29
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 381 KLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE- 437
KLK ++ + +E+E++ F + SG + + + T+
Sbjct: 4 KLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTKF 61
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
+ + D + +G I++ EFI A R DE L AF+ +D DN GYITR+E+
Sbjct: 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 121
Query: 498 MKDYGIGDEAS-------------IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ + + I + +D + DG++ +EF ++
Sbjct: 122 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 110 bits (276), Expect = 1e-28
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 392 EALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ + L+ + + SGT+ E K ++ + V+ + A D +G+
Sbjct: 13 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 72
Query: 451 GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-------- 502
TID++E+++A R + L F+ +DKD +G I R EL ++
Sbjct: 73 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 132
Query: 503 ----------IGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E + I VD + DG+++ EF R
Sbjct: 133 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 105 bits (262), Expect = 5e-27
Identities = 89/152 (58%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
AE LSEEEI GLK +F +DTD SGTIT++ELK GL R+GS+L E+E+K LMDAAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 451 GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIK 510
GTIDY EFI+AT+H +LER+E+L AF YFDKD SGYIT DE++ A KD+G+ D I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI-HID 119
Query: 511 EIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
++I E+D DNDG+I+Y EF MMR
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGI 151
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 104 bits (261), Expect = 1e-26
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 381 KLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE- 437
KL K L + ++ EI+ F + SG + E+ + S +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETA 497
L D D NG I + EFI+ R +E L AF+ +D ++ GYIT DE+ T
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 498 MKDYGIG-------------DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E +K+I +D + DG I +EF +
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (142), Expect = 8e-11
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 12/109 (11%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464
+F D D +G I +EE T L+ E ++ + D++ +G I + E ++
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 465 RYRL------------ERDEHLYKAFQYFDKDNSGYITRDELETAMKDY 501
Y++ + + K F+ DK+ GYIT DE K
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD 176
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 101 bits (253), Expect = 2e-26
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRD 492
L ++K+ +DA V G+ ++ +F + + + K F+ D D SG+I +
Sbjct: 6 LKADDIKKALDA--VKAEGSFNHKKFFALVGLKAMSA--NDVKKVFKAIDADASGFIEEE 61
Query: 493 ELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
EL+ +K + +A K + D D DG+I +EF T++
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 62.2 bits (151), Expect = 1e-12
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL---G 430
K+F A+ LK M S + +K +F +D D SG I EELK L G
Sbjct: 27 KKFFALVGLKAM---------SAND---VKKVFKAIDADASGFIEEEELKFVLKSFAADG 74
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFIS 460
L++ E K + AAD DG+G I EF +
Sbjct: 75 RDLTDAETKAFLKAADKDGDGKIGIDEFET 104
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 100 bits (251), Expect = 3e-26
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRD 492
L + +V + A + + EF + + + + KAF D+D SG+I D
Sbjct: 5 LKDADVAAALAACSAAD--SFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEED 60
Query: 493 ELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
EL+ ++++ +A K +++ D D DG I +EF M+++
Sbjct: 61 ELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 107
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 59.2 bits (143), Expect = 1e-11
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-- 431
K+F A L S ++ +K F +D DKSG I +ELK L
Sbjct: 26 KEFFAKVGLASK---------SLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 73
Query: 432 -KLSETEVKQLMDAADVDGNGTIDYIEFI 459
L++ E K + D DG+G I EF
Sbjct: 74 RALTDAETKAFLADGDKDGDGMIGVDEFA 102
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 102 bits (255), Expect = 6e-26
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 392 EALSEEEI-KGLKTMFANMDTDKSGTITYEELKTGLARLGSK--------LSETEVKQLM 442
+ LSEEEI KT+F+ + D I+ +EL+T L R+ SK S + ++
Sbjct: 11 KVLSEEEIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 69
Query: 443 DAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
+ D DGNG + +EF + F+ FD D SG ++ E+ A++ G
Sbjct: 70 NLMDRDGNGKLGLVEFNILWNRIR------NYLTIFRKFDLDKSGSMSAYEMRMAIEAAG 123
Query: 503 IGDEASIKEIISEVDTDNDGRINYEEFCTMM 533
+ ++I D++ I+++ F +
Sbjct: 124 FKLPCQLHQVIVARFADDELIIDFDNFVRCL 154
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 71.3 bits (174), Expect = 5e-15
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462
T+F D DKSG+++ E++ + G KL ++ Q++ A D ID+ F+
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCL 154
Query: 463 MHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+ E L+K F+ D +N+G I D +
Sbjct: 155 VRL------EILFKIFKQLDPENTGTIQLDLIS 181
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 47.0 bits (111), Expect = 1e-06
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG---------DEASIKEIISEVDTD 519
E D++ F D+ I+ EL+T + S + +++ +D D
Sbjct: 17 EIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRD 75
Query: 520 NDGRINYEEFCTMMR 534
+G++ EF +
Sbjct: 76 GNGKLGLVEFNILWN 90
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 99.5 bits (247), Expect = 6e-25
Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 16/156 (10%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE-VKQLMDAADVDGNGT 452
++ E++ L F + SG + E K A+ + L +A D G+
Sbjct: 10 FTKRELQVLYRGF--KNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67
Query: 453 IDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI--------- 503
+ + +F++A R E L F +D + GYI ++E+ +K
Sbjct: 68 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 127
Query: 504 ----GDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ ++D + DG + +EF +
Sbjct: 128 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 163
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 57.1 bits (137), Expect = 3e-10
Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 22/148 (14%)
Query: 366 GSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTG 425
S V++ + + +F DT ++G++ +E+ T
Sbjct: 27 PSGVVNEETFKQIYAQFFPH--------GDASTY--AHYLFNAFDTTQTGSVKFEDFVTA 76
Query: 426 LARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER------------DEH 473
L+ L +++ + D++ +G I+ E + Y + +H
Sbjct: 77 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH 136
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDY 501
+ FQ DK+ G +T DE + ++
Sbjct: 137 VDVFFQKMDKNKDGIVTLDEFLESCQED 164
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 96.6 bits (240), Expect = 1e-24
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRD 492
L ++ + + A GT DY F + + + D + + F+ DKD SG+I +
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFF--HLVGLKGKTDAQVKEVFEILDKDQSGFIEEE 61
Query: 493 ELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
EL+ +K + ++ K +++ D+D+DG+I +EF M+
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 60.7 bits (147), Expect = 4e-12
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL---G 430
K+F + LK ++ + +K +F +D D+SG I EELK L G
Sbjct: 27 KRFFHLVGLKGK---------TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFI 459
L++TE K L+ A D D +G I EF
Sbjct: 75 RDLNDTETKALLAAGDSDHDGKIGADEFA 103
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 98.9 bits (245), Expect = 1e-24
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 394 LSEEEIKGLKTMFANMDTD--KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
S EI+ L +F + + G I EE + L + K S ++ D D NG
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNG 69
Query: 452 TIDYIEFISAT-MHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD----- 505
+ + EF A + D+ ++ +FQ +D G+I R E++ +
Sbjct: 70 ILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK 129
Query: 506 ----EASIKEIISEVDTDNDGRINYEEFCTMMR 534
E I + E DT +DG+I+ EE+ +++
Sbjct: 130 DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 97.0 bits (240), Expect = 4e-24
Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 17/156 (10%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVK-----------QLMD 443
S+ ++ +KT F +D DK G IT + ++ R +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 444 AADVDGNGTIDYIEFISATMHRYRLERDEH-----LYKAFQYFDKDNSGYITRDELETAM 498
V G ID FI++ + + L F+ D + I+RDE
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 499 KDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
D+ +DT+NDG ++ EEF
Sbjct: 121 GML-GLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 94.2 bits (234), Expect = 7e-24
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
+ LS ++ + + T + +F + + F++ D D SGY
Sbjct: 2 ITDILSAEDIAAALQ--ECQDPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGY 57
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ DEL+ ++ + E+ K ++ D D DG+I +EF M+ S
Sbjct: 58 LDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.8 bits (155), Expect = 3e-13
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL---GSKLSETEVKQLMDAADVDG 449
LS+ +K +F +D D+SG + +ELK L + +L+E+E K LMDAAD DG
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDG 93
Query: 450 NGTIDYIEFI 459
+G I EF
Sbjct: 94 DGKIGADEFQ 103
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 96.3 bits (238), Expect = 7e-24
Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 27/165 (16%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKL---------------SETE 437
A++ + LK F D D +G + + + +
Sbjct: 3 AIASDR---LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGL 59
Query: 438 VKQLMDAADVDGNGTIDYIEFISATMHRY--------RLERDEHLYKAFQYFDKDNSGYI 489
L A V +G++ +FI T + + DK+ G I
Sbjct: 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQI 119
Query: 490 TRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
DE + G+ E ++VDT+ +G ++ +E T +R
Sbjct: 120 NADEFAAWLTALGMSKA-EAAEAFNQVDTNGNGELSLDELLTAVR 163
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 41.2 bits (95), Expect = 9e-05
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 20/104 (19%)
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
+ ++ +K+ D D DGNG ++ +F K Q+ +
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFE----------------KEAQHIAEAFGKDAG 45
Query: 491 RDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
E++T + + E +DG + E+F +
Sbjct: 46 AAEVQTLKNAF----GGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 96.8 bits (240), Expect = 8e-24
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 384 KMALKVIAEALSEEEIK-GLKTMFANMDTDKSGTITYEELKTGLARLGSK--------LS 434
++ + +EE+I G + +FA + + I+ EL+T L R+ +K S
Sbjct: 1 EIEANIEEIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFS 59
Query: 435 ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDEL 494
K ++D D DG+G + EF + K ++ D D SG + E+
Sbjct: 60 IETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEM 113
Query: 495 ETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533
A+++ G + ++I D++ I+++ F +
Sbjct: 114 RKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 152
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 65.6 bits (159), Expect = 5e-13
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462
+ ++ +D D+SGT+ E++ L G KL + Q++ A D ID+ F+
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIVARFADDELIIDFDNFVRCL 152
Query: 463 MHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+ E L+K F+ D +N+G I D +
Sbjct: 153 VRL------EILFKIFKQLDPENTGTIQLDLIS 179
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.9 bits (232), Expect = 2e-23
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 5/137 (3%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT-----IDYI 456
K F D G I Y + + LG + EV +++ D + ++
Sbjct: 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61
Query: 457 EFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEV 516
+ A E + F+ FDK+ +G + EL + G E +
Sbjct: 62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG 121
Query: 517 DTDNDGRINYEEFCTMM 533
D++G INYE F +
Sbjct: 122 HEDSNGCINYEAFLKHI 138
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (124), Expect = 7e-09
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
+ + F D + +G + EL+ L LG K++E EV+ ++ D NG I+Y
Sbjct: 73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINY 131
Query: 456 IEFISATM 463
F+ +
Sbjct: 132 EAFLKHIL 139
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 95.1 bits (235), Expect = 3e-23
Identities = 19/167 (11%), Positives = 53/167 (31%), Gaps = 26/167 (15%)
Query: 393 ALSEEEIKGLKTMFANM-DTDKSGTITYEELKTGLARLGS---------------KLSET 436
L++ + + +K F D + G+I + + + R E
Sbjct: 1 GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLED 60
Query: 437 EVKQLMDAADVDGNGTIDYIEFISATMHR---------YRLERDEHLYKAFQYFDKDNSG 487
E + L AD++ + + + E+++ + F+ D G
Sbjct: 61 EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ +E + K++ + A + + + + + + +
Sbjct: 121 IVDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 47.7 bits (112), Expect = 6e-07
Identities = 16/141 (11%), Positives = 38/141 (26%), Gaps = 11/141 (7%)
Query: 377 RAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG------ 430
R K +++ + + D +K +++EE +
Sbjct: 37 RYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSV 96
Query: 431 ---SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSG 487
+ + L DV G+G +D EF + ++L+ + +
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNY-CKNFQLQ-CADVPAVYNVITDGGKV 154
Query: 488 YITRDELETAMKDYGIGDEAS 508
+ + A
Sbjct: 155 TFDLNRYKELYYRLLTSPAAD 175
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 42.7 bits (99), Expect = 3e-05
Identities = 16/130 (12%), Positives = 34/130 (26%), Gaps = 2/130 (1%)
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKV 389
+ R + + ++ E + + + + K +A
Sbjct: 35 MTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCK 94
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
L + +F MD G + EE + L +V + + G
Sbjct: 95 SVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGG 152
Query: 450 NGTIDYIEFI 459
T D +
Sbjct: 153 KVTFDLNRYK 162
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 94.7 bits (234), Expect = 4e-23
Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 22/163 (13%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVD 448
+ I K MF +D + +G I+ +E+ + LG+ + + + A
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 449 GNGT-----IDYIEFISATMHRYRLERDEH-----------LYKAFQYFDKDNSGYITRD 492
G G D+ +I E +++ F DKD +G IT D
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 493 ELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
E + K GI +E D D G+++ +E
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 54.6 bits (130), Expect = 3e-09
Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 15/180 (8%)
Query: 295 PFWAETEKGIFDAILK---GGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
P W K +F+ + G + + + A D+V L P++ + +E
Sbjct: 8 PRWIGRHKHMFNFLDVNHNGKISLDE-----MVYKASDIVINNLGATPEQAKRHKDAVEA 62
Query: 352 PWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDT 411
+ G + + KL L+ A+ +F +D
Sbjct: 63 FFGGAGMKYGVE------TDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDK 116
Query: 412 DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471
D++G IT +E K G S + ++ D+D +G +D E + D
Sbjct: 117 DQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ-HLGFWYTMD 175
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 40.7 bits (94), Expect = 1e-04
Identities = 22/141 (15%), Positives = 41/141 (29%), Gaps = 13/141 (9%)
Query: 379 MNKLKKMALKVIAEALSEEEIKGL--KTMFANMDTDKSGTITYEELKTGLARLG------ 430
+ K + + + + + + F + G +L
Sbjct: 35 VYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEK 94
Query: 431 -----SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDN 485
L L D D D NG I E+ + T ++ E + F+ D D
Sbjct: 95 YAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDE 154
Query: 486 SGYITRDELETAMKDYGIGDE 506
SG + DE+ + +
Sbjct: 155 SGQLDVDEMTRQHLGFWYTMD 175
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 94.7 bits (234), Expect = 4e-23
Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 22/170 (12%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQL 441
+K+ + + IK K MF +D + +G IT +E+ + + L + +T+ Q+
Sbjct: 1 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60
Query: 442 MDAAD-----VDGNGTIDYIEFISATMHRYR-----------LERDEHLYKAFQYFDKDN 485
A ++ I + +F+ E F FDKD
Sbjct: 61 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120
Query: 486 SGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
SG IT DE + K GI + + D DN G ++ +E
Sbjct: 121 SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 52.3 bits (124), Expect = 2e-08
Identities = 24/128 (18%), Positives = 38/128 (29%), Gaps = 1/128 (0%)
Query: 351 HPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMD 410
H E ++ + +L LK A + +F D
Sbjct: 58 HQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFD 117
Query: 411 TDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470
D SGTIT +E K G S+ + + D+D G +D E +
Sbjct: 118 KDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ-HLGFWYTL 176
Query: 471 DEHLYKAF 478
D +
Sbjct: 177 DPEADGLY 184
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 40.4 bits (93), Expect = 2e-04
Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 13/133 (9%)
Query: 382 LKKMALKVIAEALSEEEIKG--LKTMFANMDTDKSGTITYEELKTGLARLGSK------- 432
+ + + ++ F + I + + G +L +
Sbjct: 40 ASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWAR 99
Query: 433 ----LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
L + D D DG+GTI E+ + E F++ D DN+G
Sbjct: 100 NEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGD 159
Query: 489 ITRDELETAMKDY 501
+ DE+ +
Sbjct: 160 LDVDEMTRQHLGF 172
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 91.6 bits (227), Expect = 7e-23
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
+ LS ++K+ + A + D+ +F + + + + K F DKD SG+
Sbjct: 2 MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGF 57
Query: 489 ITRDELETAMKDYGIG----DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
I DEL + +K + K +++ D D DG+I EEF T++
Sbjct: 58 IEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 59.6 bits (144), Expect = 1e-11
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS---KLSETEVKQLMDAADVDG 449
L ++ +K +F +D DKSG I +EL + L S LS E K LM A D DG
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93
Query: 450 NGTIDYIEFI 459
+G I EF
Sbjct: 94 DGKIGVEEFS 103
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 89.6 bits (222), Expect = 1e-22
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV 447
K +AE LSEEEI GLK +F +DTD SGTIT++ELK GL R+GS+L E+E+K LMDAAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 448 DGNGTIDYIEFISATMH 464
D +GTIDY EFI+AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 73.1 bits (179), Expect = 1e-16
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 449 GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEA 507
+G ID + A R E L + F+ D DNSG IT DEL+ +K G E+
Sbjct: 2 SSGHIDDDDKHMA--ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMES 59
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMM 533
IK+++ D D G I+Y EF
Sbjct: 60 EIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.2 bits (223), Expect = 1e-21
Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 16/157 (10%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE----VKQLMDAADVD- 448
L+++EI F + + ++ L E + +++
Sbjct: 11 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 70
Query: 449 GNGTIDYIEFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD-- 505
++ + +F+ ++ D + AF+ FD D+ G + R++L +
Sbjct: 71 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 130
Query: 506 --------EASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ I I+ E D D DG IN EF ++
Sbjct: 131 TRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 167
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.3 bits (83), Expect = 0.003
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 379 MNKLKKMALKVIAEALSEEEIKGL-KTMFANMDTDKSGTITYEELKTGLAR 428
+ + + LS E+K L + D D+ GTI E + ++R
Sbjct: 118 SRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 168
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 90.3 bits (223), Expect = 2e-21
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 20/176 (11%)
Query: 378 AMNKLKKMALKVIAEA--LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE 435
L K L+ + +EEE+ F + SG IT +E +T ++ +
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADP 61
Query: 436 TE-VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDEL 494
+ + + D + +GT+D+ E++ A + ++ L AF +D D +G I+++E+
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 495 ETA---------------MKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ + E ++I +D ++ +EF +
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.6 bits (107), Expect = 4e-06
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 20/148 (13%)
Query: 373 MKQFRAMNKLKKMALKVIAEALSEEEIKG-----LKTMFANMDTDKSGTITYEELKTGLA 427
+ F ++ + S+ + + +F + D + GT+ ++E L
Sbjct: 31 YQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
Query: 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEF--------------ISATMHRYRLERDEH 473
+ + +++ DVDGNGTI E + + ++
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKR 150
Query: 474 LYKAFQYFDKDNSGYITRDE-LETAMKD 500
K + +F K + +T E +E + +
Sbjct: 151 AEKIWGFFGKKDDDKLTEKEFIEGTLAN 178
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 2e-21
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 14/128 (10%)
Query: 412 DKSGTITYEELKTGLARLG-----SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY 466
+ G + EEL+ L + G S S + ++ D D G + + F
Sbjct: 11 GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALN 70
Query: 467 RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRIN 525
+ F D+D SG + EL A+ G ++ I+ +GRI
Sbjct: 71 ------AWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIF 122
Query: 526 YEEFCTMM 533
++++
Sbjct: 123 FDDYVACC 130
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.6 bits (170), Expect = 1e-14
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464
F +D D SGT+ + EL+ + +G +LS + ++ NG I + ++++ +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIV--KRYSKNGRIFFDDYVACCV- 131
Query: 465 RYRLERDEHLYKAFQYFDKDNSGYIT---RDELETAM 498
+ L F+ D G D L+ M
Sbjct: 132 -----KLRALTDFFRKRDHLQQGSANFIYDDFLQGTM 163
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 89.5 bits (221), Expect = 3e-21
Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 35/209 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD---------------RED 140
+GK +G G+ + C + K K+
Sbjct: 2 DAIGKLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60
Query: 141 IKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL 200
+ E + +Q L G + + + ++MEL E + +
Sbjct: 61 ARNEFRALQKLQGL-AVPKVYAWEGN----AVLMELIDAKE-------LYRVRVENPDEV 108
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
I+ V + G++H DL N L+S + + DF SV + E +R+I+
Sbjct: 109 LDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG----IWIIDFPQSVEVGEEG-WREILER 163
Query: 261 AYYVAPEVLRRSYGKEIDVWSAGVILYIL 289
R+Y E D+ S I IL
Sbjct: 164 DVRNIITYFSRTYRTEKDINS--AIDRIL 190
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.9 bits (212), Expect = 3e-20
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 15/148 (10%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-----SKLSETEVKQLMDAADVD 448
+ L FA + + G I +EL+ L + G + + ++ D D
Sbjct: 1 FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59
Query: 449 GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEA 507
+GT+ + EF + F FD D SG + EL+ A+ G
Sbjct: 60 MSGTMGFNEFKELWAVLN------GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQ 113
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
++ I +G+I ++++
Sbjct: 114 AVNSIAKRY--STNGKITFDDYIACCVK 139
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 4e-11
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 404 TMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463
F + DTD+SGT+ +EL+ L +G +LS V + NG I + ++I+
Sbjct: 81 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK--RYSTNGKITFDDYIAC-- 136
Query: 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+ L +F+ D G + +
Sbjct: 137 ----CVKLRALTDSFRRRDTAQQGVVNFPYDD 164
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 84.3 bits (207), Expect = 7e-20
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 7/153 (4%)
Query: 394 LSEEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGSKLSETEVKQLMDA-ADVDGN 450
LS++EI LK +F D + G + +L LG +V + + +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 451 GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASI 509
+ + +AF+ FD++ G+I+ EL + G + +
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 120
Query: 510 KEIISEVDT--DNDGRINYEEFCTMMRSGTPQP 540
EII D D +G + YE+F + +G P P
Sbjct: 121 DEIIKLTDLQEDLEGNVKYEDFVKKVMAG-PYP 152
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 79.9 bits (197), Expect = 2e-19
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEE 528
+E + +AF+ FD + G I DE + M+ G +A ++E + E D D +G I+ E
Sbjct: 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 60
Query: 529 FCTMMR 534
F +++
Sbjct: 61 FMDLIK 66
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 66.0 bits (161), Expect = 2e-14
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTID 454
EEE + F D + G I ++E K + ++G + L++ EV++ M AD DGNG ID
Sbjct: 1 EEE---ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 57
Query: 455 YIEFI 459
EF+
Sbjct: 58 IPEFM 62
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 81.5 bits (200), Expect = 9e-19
Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 15/145 (10%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLG--------SKLSETEVKQLMDAADVD 448
EE++ + +FA + ++ EL L ++ + ++ D D
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 449 GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEAS 508
G + + +Y + ++ FD D SG I EL A + G
Sbjct: 60 TTGKLGF------EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 509 IKEIISEVDTDNDGRINYEEFCTMM 533
+ +I +D G ++++ F + +
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 62.6 bits (151), Expect = 3e-12
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462
+ ++ D D+SGTI EL G L+E ++ D G +D+ FIS
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCL 138
Query: 463 MHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+ + +++AF+ DKD +G I + E
Sbjct: 139 VRL------DAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 80.4 bits (197), Expect = 1e-18
Identities = 25/145 (17%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L +++I+ +K F+ +D D+ G ++ E++K +LG + E+ ++ + G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 454 DYIEFISATMHRYRLERDEHLYKA-FQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE 511
++ F+S + E + F FD+ + + + ++ +++ G ++ ++
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 512 IISEVDTDNDGRINYEEFCTMMRSG 536
E + G+ +Y +F M++
Sbjct: 117 TFKEAPVE-GGKFDYVKFTAMIKGS 140
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 78.4 bits (193), Expect = 1e-18
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 469 ERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRIN 525
ERD E + KAF+ FD DNSG IT +L K+ G E ++E+I+E D ++D I+
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 526 YEEFCTMMR 534
+EF +M+
Sbjct: 64 EDEFIRIMK 72
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 63.4 bits (154), Expect = 2e-13
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
E S EE + F D D SGTIT ++L+ LG L+E E+++++ AD + +
Sbjct: 4 ERDSREE---ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 452 TIDYIEFI 459
ID EFI
Sbjct: 61 EIDEDEFI 68
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 47.2 bits (112), Expect = 1e-07
Identities = 16/70 (22%), Positives = 26/70 (37%)
Query: 430 GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYI 489
G + S E+ + D D +GTI + +E L + D+++ I
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEI 62
Query: 490 TRDELETAMK 499
DE MK
Sbjct: 63 DEDEFIRIMK 72
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 79.4 bits (194), Expect = 2e-18
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFIS---A 461
+F +D + G ++YEE+K +++ + +E ++ + + D DGNG ID EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 462 TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDND 521
+ + L ++ D D G +T++E+ + K +GI + E + + D + D
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---VAEQVMKADANGD 121
Query: 522 GRINYEEFCTMM 533
G I EEF
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 37.0 bits (84), Expect = 0.001
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463
++ MD D G +T EE+ + + G +V + + AD +G+G I EF+ ++
Sbjct: 80 LYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEFLEFSL 134
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 76.9 bits (189), Expect = 4e-18
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEF 529
+E L F+ FDK+ G+I +EL ++ G E I++++ + D +NDGRI+++EF
Sbjct: 8 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 67
Query: 530 CTMMRS 535
MM
Sbjct: 68 LKMMEG 73
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 59.2 bits (143), Expect = 5e-12
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ SEEE L F D + G I EEL L G + E +++ LM +D + +
Sbjct: 3 AKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 59
Query: 451 GTIDYIEFI 459
G ID+ EF+
Sbjct: 60 GRIDFDEFL 68
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 78.9 bits (193), Expect = 4e-18
Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 3/140 (2%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
+ K F+ D +G I + L G + +++ ++
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTL-AEITEIESTLPAEVDMEQFL 60
Query: 457 EFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-GDEASIKEIISE 515
+ ++ E K FQ FDKD +G I EL + G + E++
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120
Query: 516 VDTDNDGRINYEEFCTMMRS 535
V DG +NY +F M+ +
Sbjct: 121 VPVK-DGMVNYHDFVQMILA 139
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 36.5 bits (83), Expect = 0.002
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQP 540
D++ K+ S D GRI ++R+ P
Sbjct: 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNP 38
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 78.2 bits (191), Expect = 7e-18
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN-------GT 452
+ K +F D G I + L L +G + V+ +++A +
Sbjct: 2 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQI 61
Query: 453 IDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-GDEASIKE 511
IE + + E KAFQ FDK+++G ++ +L + G +A + E
Sbjct: 62 TGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDE 121
Query: 512 IISEVDTDNDGRINYEEFCTMM 533
++ V+ D++G I+Y++F +
Sbjct: 122 LLKGVEVDSNGEIDYKKFIEDV 143
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.2 bits (95), Expect = 5e-05
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
F D + +G ++ +L+ L LG KL++ EV +L+ +VD NG IDY +FI
Sbjct: 83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIED 142
Query: 462 TMHR 465
+ +
Sbjct: 143 VLRQ 146
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 35.8 bits (81), Expect = 0.004
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ K+I + D G I + +R+
Sbjct: 3 ANKDIFTLFDKKGQGAIAKDSLGDYLRA 30
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.2 bits (192), Expect = 1e-17
Identities = 15/144 (10%), Positives = 37/144 (25%), Gaps = 20/144 (13%)
Query: 409 MDTDKSGTITYEELKTGLARLGSKLSET--EVKQLMDAADVDGNGTIDYIEFISATMHRY 466
M + G I + ++ D + S M
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSL- 74
Query: 467 RLERDEHLYKAFQYFDKDNSGYITRDELETAMKD-----------YGIGDEASIKEIISE 515
R E + + F + Y+T++ L + + ++ +I +
Sbjct: 75 -CPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDK 132
Query: 516 VDTD----NDGRINYEEFCTMMRS 535
+ G+++ E +
Sbjct: 133 YEPSGINAQRGQLSPEGMVWFLCG 156
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.4 bits (107), Expect = 3e-06
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 5/76 (6%)
Query: 470 RDEHLYKAFQ--YFDKDNSGYITRDELETAMKDYGIGDEASIKE---IISEVDTDNDGRI 524
R L K ++ G I EA++ + D N
Sbjct: 3 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDF 62
Query: 525 NYEEFCTMMRSGTPQP 540
+ + + S P+P
Sbjct: 63 PEPVYKSFLMSLCPRP 78
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 75.0 bits (184), Expect = 2e-17
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528
+ + F+ FD + G I+ EL A+K G ++ +++E+DTD DG I+++E
Sbjct: 3 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 62
Query: 529 FCTMMRS 535
F R+
Sbjct: 63 FTDFARA 69
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 69.6 bits (170), Expect = 1e-15
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+ ++I + +F DT+ G I+ EL L L ++ EV+++M D DG+G I
Sbjct: 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFIS 59
Query: 455 YIEFISATMHRYRLERDEHLYKAF 478
+ EF R + + K F
Sbjct: 60 FDEFT--DFARANRGLVKDVSKIF 81
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 47.2 bits (112), Expect = 1e-07
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELET 496
+ +++ D +G+G I E A + DE + D D G+I+ DE
Sbjct: 7 DRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEV-RRMMAEIDTDGDGFISFDEFTD 65
Query: 497 AMKDYGIGDEASIKEI 512
+ + +K++
Sbjct: 66 FARA----NRGLVKDV 77
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 73.5 bits (180), Expect = 7e-17
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEF 529
+E L F+ FDK+ GYI +EL+ ++ G E I+E++ + D +NDGRI+Y+EF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 530 CTMMRS 535
M+
Sbjct: 74 LEFMKG 79
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 60.0 bits (145), Expect = 4e-12
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K ++ +EEE L +F D + G I EELK L G ++E ++++LM D
Sbjct: 5 MKDDSKGKTEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61
Query: 447 VDGNGTIDYIEFI 459
+ +G IDY EF+
Sbjct: 62 KNNDGRIDYDEFL 74
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 46.9 bits (111), Expect = 1e-07
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 434 SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
+E E+ L D + +G ID E ++ + + + DK+N G I DE
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 494 LETAMK 499
MK
Sbjct: 73 FLEFMK 78
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.5 bits (184), Expect = 1e-16
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
+EIK L F +D D SG+++ EE + V++++D D DGNG +
Sbjct: 10 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSL----PELQQNPLVQRVIDIFDTDGNGEV 65
Query: 454 DYIEFISATMHRYRLERDEH-LYKAFQYFDKDNSGYITRDELETAMKDYG---IGDEAS- 508
D+ EFI E L AF+ +D D GYI+ EL +K + D
Sbjct: 66 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 125
Query: 509 --IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ + I D D DGRI++EEFC ++
Sbjct: 126 QIVDKTIINADKDGDGRISFEEFCAVVGG 154
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 71.6 bits (175), Expect = 2e-16
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEF 529
+E + +AF+ FDKD +GYI+ EL M + G + + E+I E D D DG++NYEEF
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 61
Query: 530 CTMM 533
MM
Sbjct: 62 VQMM 65
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.2 bits (148), Expect = 9e-13
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEEI+ F D D +G I+ EL+ + LG KL++ EV +++ AD+DG+G ++
Sbjct: 1 SEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 57
Query: 455 YIEFI 459
Y EF+
Sbjct: 58 YEEFV 62
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.0 bits (93), Expect = 3e-05
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 434 SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
SE E+++ D DGNG I E + DE + + + D D G + +E
Sbjct: 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 60
Query: 494 LETAM 498
M
Sbjct: 61 FVQMM 65
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 71.5 bits (175), Expect = 2e-16
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ F+ FDK+ G ++ DE + + I + E+D D +G +N +EF + +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
Query: 535 S 535
Sbjct: 65 K 65
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 59.6 bits (144), Expect = 3e-12
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
K +F D +K G ++ +E + ++ ++ + + DVDGNG ++ EF S
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 51.9 bits (124), Expect = 2e-09
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+ K++ + D + +G + EF + E + K F+ D D +G + DE
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 496 TAMK 499
+ ++
Sbjct: 61 SCIE 64
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 71.4 bits (175), Expect = 3e-16
Identities = 11/72 (15%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 469 ERDEHLYKAFQYFD--KDNSGYITRDELETAMKDYGIG---DEASIKEIISEVDTDNDGR 523
+ L F+ + + + ++++EL+ ++ ++ ++ E+D + DG
Sbjct: 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63
Query: 524 INYEEFCTMMRS 535
+++EEF +++
Sbjct: 64 VSFEEFQVLVKK 75
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 57.9 bits (140), Expect = 2e-11
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 395 SEEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGSKL--SETEVKQLMDAADVDGN 450
+++ LK++F ++ EELK + L + L D +G+
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 451 GTIDYIEFIS 460
G + + EF
Sbjct: 62 GEVSFEEFQV 71
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.4 bits (172), Expect = 6e-16
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
+ L+EE+I K FA D D +G+I+ EL T + LG SE EV LM+ DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 451 GTIDYIEFISATMHR 465
I++ EF+ A M R
Sbjct: 61 HQIEFSEFL-ALMSR 74
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.9 bits (163), Expect = 1e-14
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ +AF FDKDN+G I+ EL T M+ G+ EA + ++++E+D D + +I +
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 528 EFCTMM 533
EF +M
Sbjct: 67 EFLALM 72
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 69.9 bits (171), Expect = 2e-15
Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 461 ATMHRYRLERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKDYGIG---DEASIKEIIS 514
A LE E + F + ++ ++ +E + + D S+ E +
Sbjct: 2 AAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMK 61
Query: 515 EVDTDNDGRINYEEFCTMM 533
+D + D + + E+ ++
Sbjct: 62 SLDVNQDSELKFNEYWRLI 80
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 50.7 bits (121), Expect = 1e-08
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 396 EEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLG--SKLSETEVKQLMDAADVDGNG 451
EE I+ + T F + +++ E K + + + + M + DV+ +
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69
Query: 452 TIDYIEFI 459
+ + E+
Sbjct: 70 ELKFNEYW 77
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 69.2 bits (169), Expect = 2e-15
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E AF FD D G I+ EL T M+ G + + II EVD D G I++E
Sbjct: 11 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 70
Query: 528 EFCTMM 533
EF MM
Sbjct: 71 EFLVMM 76
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 67.7 bits (165), Expect = 7e-15
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67
Query: 454 DYIEFISATMHRYR 467
D+ EF+ + + +
Sbjct: 68 DFEEFLVMMVRQMK 81
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 46.5 bits (110), Expect = 2e-07
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 431 SKLSETEVKQLMDA---ADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSG 487
+ LSE + + A D DG G I E + + E L + D+D SG
Sbjct: 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 65
Query: 488 YITRDELETAM 498
I +E M
Sbjct: 66 TIDFEEFLVMM 76
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 68.8 bits (168), Expect = 2e-15
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 468 LERDEHLYKAFQYFDKD--NSGYITRDELETAMKDYGIG---DEASIKEIISEVDTDNDG 522
++ E + AF+ F + I+++EL+ M+ G +++ E+I EVD + DG
Sbjct: 1 MKSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 523 RINYEEFCTMMR 534
+++EEF MM+
Sbjct: 61 EVSFEEFLVMMK 72
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.3 bits (133), Expect = 1e-10
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKL--SETEVKQLMDAADVDGNGT 452
S EEIKG +FA + D I+ EELK + LG L + + ++++ D +G+G
Sbjct: 3 SPEEIKGAFEVFAAKEGD-PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 453 IDYIEFI 459
+ + EF+
Sbjct: 62 VSFEEFL 68
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 68.7 bits (168), Expect = 4e-15
Identities = 15/77 (19%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE+ + + F Y K+ + + + EL+ + DEA+ ++++S +D+
Sbjct: 4 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 63
Query: 519 DNDGRINYEEFCTMMRS 535
+ D ++++E+C +
Sbjct: 64 NRDNEVDFQEYCVFLSC 80
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 54.1 bits (130), Expect = 6e-10
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGSKL-----SETEVKQLMDAADVD 448
E+ + + + F + ELK L R E ++LM D +
Sbjct: 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 64
Query: 449 GNGTIDYIEFIS 460
+ +D+ E+
Sbjct: 65 RDNEVDFQEYCV 76
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 73.9 bits (180), Expect = 5e-15
Identities = 16/83 (19%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 453 IDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD--EASIK 510
D + + + + + L + + D D SG ++++E++ ++D I + +
Sbjct: 234 EDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFE 293
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
S VD D+ ++Y+EF ++
Sbjct: 294 HQFSVVDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 73.5 bits (179), Expect = 6e-15
Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 24/201 (11%)
Query: 359 EASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTIT 418
D L+ + + + L+ LSEE+ L+ +F + SG +
Sbjct: 81 ARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFS 140
Query: 419 YEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF--------ISATMHRYRLER 470
+++LK LA+ + E +K+L + D G + YI R
Sbjct: 141 FQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTN 200
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEV-------------- 516
++ + + ++ A+ Y DE+ V
Sbjct: 201 SNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYA 260
Query: 517 --DTDNDGRINYEEFCTMMRS 535
D D G+++ EE ++
Sbjct: 261 FADFDKSGQLSKEEVQKVLED 281
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 56.9 bits (136), Expect = 2e-09
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463
++A D DKSG ++ EE++ L + + + + DVD + ++ Y EF+ +
Sbjct: 258 LYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 37.7 bits (86), Expect = 0.003
Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 18/156 (11%)
Query: 383 KKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLM 442
++ +K + E L EE K L D+ + L+ +A+ E E K +
Sbjct: 10 REANVKKVHENL-EELQKKLDHTSFAHKEDR------DRLEAQIAQK-----EQEQKAKL 57
Query: 443 DAADVDGNGTIDYIEFISATMHRYRLERDEH---LYKAFQYFDKDNSGYITRDELETAMK 499
D D E R + L + + D SGY + +
Sbjct: 58 AEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLS 117
Query: 500 DYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ D ++++ G+ ++++ ++
Sbjct: 118 EE---DTNILRQLFLSSAVSGSGKFSFQDLKQVLAK 150
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 65.8 bits (160), Expect = 3e-14
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 454 DYIEFI 459
D+ EF+
Sbjct: 62 DFPEFL 67
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 65.4 bits (159), Expect = 4e-14
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ +AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 528 EFCTMM 533
EF TMM
Sbjct: 65 EFLTMM 70
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 66.1 bits (161), Expect = 3e-14
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 468 LERD-EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG------DEASIKEIISEVDTDN 520
+E E + F F D GY+T+++L M+ G D ++ +I+ ++D
Sbjct: 4 MEHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCR 62
Query: 521 DGRINYEEFCTMM 533
DG++ ++ F +++
Sbjct: 63 DGKVGFQSFFSLI 75
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 53.0 bits (127), Expect = 1e-09
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-----KLSETEVKQLMDAADVDGN 450
E ++ + F DK G +T E+L+ + + + V ++M D +
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 451 GTIDYIEFIS 460
G + + F S
Sbjct: 64 GKVGFQSFFS 73
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 65.8 bits (160), Expect = 4e-14
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 469 ERDEHLYKAFQYFDKDNS-GYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINY 526
E+ AF F G I+ EL M+ G ++E+I EVD D G +++
Sbjct: 12 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 71
Query: 527 EEFCTMM 533
+EF MM
Sbjct: 72 DEFLVMM 78
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 65.4 bits (159), Expect = 5e-14
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
K E L+EE+ K F + G+I+ +EL + LG + E+++++D D
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 447 VDGNGTIDYIEFIS 460
DG+GT+D+ EF+
Sbjct: 63 EDGSGTVDFDEFLV 76
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 64.9 bits (158), Expect = 8e-14
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 468 LERD-EHLYKAFQ-YFDKDNSGYI-TRDELETAMKDY--GIGDEASIKEIISEVDTDNDG 522
LE+ + + Y + + RD+L+ ++ + E+D + DG
Sbjct: 5 LEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDG 64
Query: 523 RINYEEFCTMMRS 535
+N++EF ++
Sbjct: 65 AVNFQEFLILVIK 77
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 45.6 bits (108), Expect = 4e-07
Identities = 8/68 (11%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 396 EEEIKGLKTMFAN-MDTDKSGTI-TYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGT 452
E+ + + ++ + ++LK L + + D++ +G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 453 IDYIEFIS 460
+++ EF+
Sbjct: 66 VNFQEFLI 73
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 64.6 bits (157), Expect = 1e-13
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKDYGIG------DEASIKEIISEVDT 518
LE E L F + K+ + +++ EL+ ++ D ++ +I+ E+D
Sbjct: 4 LETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE 63
Query: 519 DNDGRINYEEFCTMMRS 535
+ DG ++++EF ++ +
Sbjct: 64 NGDGEVDFQEFVVLVAA 80
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 50.7 bits (121), Expect = 9e-09
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGS-----KLSETEVKQLMDAADVD 448
E ++ L +F ++ +ELK L S + V ++M D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN 64
Query: 449 GNGTIDYIEFIS 460
G+G +D+ EF+
Sbjct: 65 GDGEVDFQEFVV 76
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 64.1 bits (156), Expect = 2e-13
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKDNSGY-ITRDELETAMKDYGIG------DEASIKEIISEVDT 518
LE+ + FQ Y + Y + + EL+ ++ E + +S +DT
Sbjct: 4 LEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 63
Query: 519 DNDGRINYEEFCTMM 533
+ D +++ E+ +
Sbjct: 64 NKDCEVDFVEYVRSL 78
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 49.1 bits (117), Expect = 3e-08
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFAN-MDTDKSG-TITYEELKTGLARLGS-----KLSETEVKQLMDAADVD 448
E+ + + F + ELK L + + + E + + M D +
Sbjct: 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64
Query: 449 GNGTIDYIEFIS 460
+ +D++E++
Sbjct: 65 KDCEVDFVEYVR 76
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.7 bits (152), Expect = 2e-13
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFC 530
E KAFQ FDK+++G ++ +L + G +A + E++ V+ D++G I+Y++F
Sbjct: 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.0 bits (137), Expect = 2e-11
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFI 459
F D + +G ++ +L+ L LG KL++ EV +L+ +VD NG IDY +FI
Sbjct: 3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.3 bits (86), Expect = 2e-04
Identities = 6/57 (10%), Positives = 18/57 (31%)
Query: 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
+ + D + G + + D + + + + D++G I +
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 58
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 3e-13
Identities = 13/84 (15%), Positives = 23/84 (27%), Gaps = 17/84 (20%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-----------------DEASIKE 511
+ F D ++ G + ELE +
Sbjct: 13 PNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREH 72
Query: 512 IISEVDTDNDGRINYEEFCTMMRS 535
++ VDT+ D + EEF +
Sbjct: 73 VMKNVDTNQDRLVTLEEFLASTQR 96
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 9e-11
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE-------------- 437
+ L KT F D + G + +EL+ + K+ + +
Sbjct: 9 DGLDPNRFN-PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 67
Query: 438 --VKQLMDAADVDGNGTIDYIEFISAT 462
+ +M D + + + EF+++T
Sbjct: 68 RMREHVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.1 bits (150), Expect = 7e-13
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 459 ISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVD 517
I A +H+ + + F+ FD + I+R+E + + +E+
Sbjct: 7 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 66
Query: 518 TDNDGRINYEEFCTMM 533
+ GR+ Y +F +
Sbjct: 67 VNAKGRLKYPDFLSRF 82
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 3e-10
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
+ F N DT K+ TI+ EE + R L++ + +L + V+ G + Y
Sbjct: 16 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 75
Query: 456 IEFISA 461
+F+S
Sbjct: 76 PDFLSR 81
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.4 bits (155), Expect = 1e-12
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG-SKLSETEVKQLMDAADVDG 449
A + + L +F +D D+SG I+ EL+ L+ + + V+ ++ D +
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 450 NGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI-GDEAS 508
+++ EF + F+ +D+DNSG I ++EL+ A+ +G +
Sbjct: 70 KAGVNFSEFTGVWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 123
Query: 509 IKEIISEVDTDNDGRINYEEFCTMM 533
+I + D G+I +++F
Sbjct: 124 HDILIRKFDRQGRGQIAFDDFIQGC 148
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.9 bits (120), Expect = 4e-08
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 405 MFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464
+F D D SG I ELK L+ G +LS+ L+ D G G I + +FI +
Sbjct: 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI- 149
Query: 465 RYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
+ L F+ +D D G+I +
Sbjct: 150 -----VLQRLTDIFRRYDTDQDGWIQVSYEQ 175
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 60.5 bits (146), Expect = 3e-12
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 463 MHRYRLERDEHLY-KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDND 521
+ +L +Y K ++ + N+G + + +K G+ D + +I DTD
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI-LGKIWDLADTDGK 59
Query: 522 GRINYEEFCTMMR------SGTPQPAKLI 544
G ++ +EF +R +G +
Sbjct: 60 GVLSKQEFFVALRLVACAQNGLEVSLSSL 88
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.4 bits (94), Expect = 4e-05
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462
+ + ++ +G + + L + G + + ++ D AD DG G + EF A
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLP--DLILGKIWDLADTDGKGVLSKQEFFVA- 70
Query: 463 MH 464
+
Sbjct: 71 LR 72
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 59.1 bits (143), Expect = 7e-12
Identities = 13/73 (17%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 468 LERD-EHLYKAFQ-YFDKDNSGY-ITRDELETAMKD----YGIGDEASIKEIISEVDTDN 520
L++ L F Y ++ + +++ EL+ ++ +A I ++ ++D +
Sbjct: 4 LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNK 63
Query: 521 DGRINYEEFCTMM 533
D +N++E+ T +
Sbjct: 64 DQEVNFQEYVTFL 76
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 42.2 bits (99), Expect = 8e-06
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 396 EEEIKGLKTMFANM-DTDKSG-TITYEELK---TGLARLGSKLSETEVKQLMDAADVDGN 450
++ I L +F + T++ +ELK +GSKL + E+ +LM+ D + +
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 451 GTIDYIEFIS 460
+++ E+++
Sbjct: 65 QEVNFQEYVT 74
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 59.0 bits (143), Expect = 1e-11
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKD------YGIGDEASIKEIISEVDT 518
LE E + F Y + + +++ EL+ + I D+A I EI +D
Sbjct: 3 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDA 62
Query: 519 DNDGRINYEEFCTMM 533
+ D +++++EF +++
Sbjct: 63 NQDEQVDFQEFISLV 77
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 43.2 bits (102), Expect = 3e-06
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFANMDTDK--SGTITYEELKTGLARLG-----SKLSETEVKQLMDAADVD 448
EE ++G+ +F K T++ ELK L + + + + ++ D +
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 449 GNGTIDYIEFIS 460
+ +D+ EFIS
Sbjct: 64 QDEQVDFQEFIS 75
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 9e-11
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCT 531
+ F DKD G+++ E+ + I S DT + G+++ ++F
Sbjct: 10 AKYDEIFLKTDKDMDGFVSGLEVREIFL-KTGLPSTLLAHIWSLCDTKDCGKLSKDQFAL 68
Query: 532 MMR-------SGTPQPAKL 543
G P L
Sbjct: 69 AFHLISQKLIKGIDPPHVL 87
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (125), Expect = 2e-09
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+S E +F D D G ++ E++ L + L T + + D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREI--FLKTGLPSTLLAHIWSLCDTKDCGK 60
Query: 453 IDYIEFISATMH 464
+ +F A H
Sbjct: 61 LSKDQFALA-FH 71
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.9 bits (85), Expect = 6e-04
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 431 SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490
S + + ++ D D +G + +E + L + D + G ++
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL--PSTLLAHIWSLCDTKDCGKLS 62
Query: 491 RDELETAMK 499
+D+ A
Sbjct: 63 KDQFALAFH 71
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 55.4 bits (132), Expect = 1e-09
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A + + L F +DTD SG I+ EL L+ G S ++L+ D + +G
Sbjct: 11 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 70
Query: 453 IDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE 511
I + EF + + F+ D G + +E+ A+ G E + +
Sbjct: 71 ITFDEFKDLHHFIL------SMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQA 124
Query: 512 IISEVDTDNDGRINYEEFCTMM 533
++ + D G + ++++ +
Sbjct: 125 LMRKFDRQRRGSLGFDDYVELS 146
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 43.5 bits (101), Expect = 1e-05
Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 428 RLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSG 487
G ++SE + LM D G++ + +++ ++ R+ F ++D++ +G
Sbjct: 112 SSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVR------NVFAFYDRERTG 165
Query: 488 YIT 490
+T
Sbjct: 166 QVT 168
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.3 bits (125), Expect = 2e-09
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528
E+ ++ F+ D +G+I + + + I D D DG + +E
Sbjct: 6 EQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPIL-ELSHIWELSDFDKDGALTLDE 64
Query: 529 FCTMMR------SGTPQPAKL 543
FC +G P KL
Sbjct: 65 FCAAFHLVVARKNGYDLPEKL 85
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.2 bits (122), Expect = 7e-09
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+++E+ + F + D +G I K + SKL E+ + + +D D +G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59
Query: 453 IDYIEFISATMH 464
+ EF +A H
Sbjct: 60 LTLDEFCAA-FH 70
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.2 bits (83), Expect = 0.001
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Query: 432 KLSETEVK---QLMDAADVDGNGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSG 487
K+++ + + D N +I +A + L ++ D D G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLN---GFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDG 58
Query: 488 YITRDELETAMK 499
+T DE A
Sbjct: 59 ALTLDEFCAAFH 70
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 51.5 bits (123), Expect = 6e-09
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
Query: 469 ERDEHLYKAFQYFDK--DNSGYITRDELETAMKD--------YGIGDEASIKEIISEVDT 518
+ + + F K I + L T MK+ + ++ + D
Sbjct: 4 QAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK 63
Query: 519 DNDGRINYEEFCTMM 533
+ D +I++ EF +++
Sbjct: 64 NEDKKIDFSEFLSLL 78
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 51.1 bits (122), Expect = 8e-09
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGS-------KLSETEVKQLMD 443
+ +E I G+ MF + I L T + K + + +
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 444 AADVDGNGTIDYIEFIS 460
D + + ID+ EF+S
Sbjct: 60 KKDKNEDKKIDFSEFLS 76
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (122), Expect = 6e-09
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR- 534
F +G+++ D+++ + + + + + + D D+DG ++ +EF M
Sbjct: 14 AIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDI-LGRVWELSDIDHDGMLDRDEFAVAMFL 71
Query: 535 -----SGTPQPAKL 543
P P L
Sbjct: 72 VYCALEKEPVPMSL 85
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (121), Expect = 8e-09
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A+ E+ +F ++ +G ++ +++K L L + ++ + +D+D +G
Sbjct: 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGM 59
Query: 453 IDYIEFISATMH 464
+D EF A M
Sbjct: 60 LDRDEFAVA-MF 70
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (118), Expect = 3e-08
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 9/87 (10%)
Query: 465 RYRLERDEHLY--KAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDG 522
+R+ ++ Y F+ D S +I+ + + + I D D DG
Sbjct: 13 PWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIP-ELSYIWELSDADCDG 71
Query: 523 RINYEEFCTMMR------SGTPQPAKL 543
+ EFC +G P P L
Sbjct: 72 ALTLPEFCAAFHLIVARKNGYPLPEGL 98
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.9 bits (103), Expect = 4e-06
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
++EE+ + F ++ D S I+ K SKLS E+ + + +D D +G
Sbjct: 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFF--TKSKLSIPELSYIWELSDADCDGA 72
Query: 453 IDYIEFISATMH 464
+ EF +A H
Sbjct: 73 LTLPEFCAA-FH 83
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.0 bits (85), Expect = 9e-04
Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 5/71 (7%)
Query: 432 KLSETEVK---QLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
+++E + + + D + I + L ++ D D G
Sbjct: 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGA 72
Query: 489 ITRDELETAMK 499
+T E A
Sbjct: 73 LTLPEFCAAFH 83
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 44.1 bits (105), Expect = 4e-07
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
+E + +AF+ FDKD +GYI+ EL M + G
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 34.9 bits (81), Expect = 8e-04
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG 430
SEEEI+ F D D +G I+ EL+ + LG
Sbjct: 1 SEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 43.2 bits (102), Expect = 3e-06
Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKDY------GIGDEASIKEIISEVDT 518
LE+ L F Y ++ + + + EL+ + + I ++ + +++ +D+
Sbjct: 4 LEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS 63
Query: 519 DNDGRINYEEFCTMM 533
D DG +++EF +
Sbjct: 64 DGDGECDFQEFMAFV 78
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 35.9 bits (83), Expect = 0.001
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 396 EEEIKGLKTMF---ANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADV 447
E+ + L +F + + DK + ELK + L + V ++M+ D
Sbjct: 5 EKAVVALIDVFHQYSGREGDK-HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS 63
Query: 448 DGNGTIDYIEFIS 460
DG+G D+ EF++
Sbjct: 64 DGDGECDFQEFMA 76
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 42.4 bits (100), Expect = 6e-06
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQ-YFDKD-NSGYITRDELETAMKDY------GIGDEASIKEIISEVDT 518
ER E L FQ + +D N+ I++ E M D + ++ ++D
Sbjct: 4 TERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDL 63
Query: 519 DNDGRINYEEFCTMM 533
D+DG+++++EF ++
Sbjct: 64 DSDGQLDFQEFLNLI 78
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 36.3 bits (84), Expect = 0.001
Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 396 EEEIKGLKTMF---ANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADV 447
E I+ L +F A D + I+ E + ++ + ++M D+
Sbjct: 5 ERCIESLIAIFQKHAGRDGNN-TKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDL 63
Query: 448 DGNGTIDYIEFIS 460
D +G +D+ EF++
Sbjct: 64 DSDGQLDFQEFLN 76
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 42.4 bits (100), Expect = 8e-06
Identities = 12/75 (16%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 468 LERD-EHLYKAFQYF--DKDNSGYITRDELETAMKDY------GIGDEASIKEIISEVDT 518
LE + F + + ++ +T+ EL+ M+ D+ ++ +++ ++D
Sbjct: 4 LETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDA 63
Query: 519 DNDGRINYEEFCTMM 533
+ D ++++ EF +
Sbjct: 64 NGDAQVDFSEFIVFV 78
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 35.1 bits (81), Expect = 0.003
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 396 EEEIKGLKTMFAN--MDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVD 448
E + + +F+ + T+T ELK + + L S + V +L+ D +
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN 64
Query: 449 GNGTIDYIEFIS 460
G+ +D+ EFI
Sbjct: 65 GDAQVDFSEFIV 76
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 40.0 bits (94), Expect = 4e-05
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 479 QYFDKD-NSGYITRDELETAMKD-------YGIGDEASIKEIISEVDTDNDGRINYEEFC 530
QY K + + + E + ++ +E I+ I+ ++DT+ D ++++EEF
Sbjct: 18 QYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 77
Query: 531 TMM 533
+M
Sbjct: 78 MLM 80
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Score = 43.6 bits (102), Expect = 4e-05
Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 4/137 (2%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ----DREDIKREIQIMQHLSGQQ 155
+E+G G + + + K + V + + + E +
Sbjct: 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV 91
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+ R Y D + VME S ++ K + +G + + + + +
Sbjct: 92 PHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYA 151
Query: 216 VMHRDLKPENFLLSNKD 232
+ + K +N +
Sbjct: 152 LEPKVKKQLVKQFTNPE 168
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} Length = 151 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (92), Expect = 2e-04
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 478 FQYFDKD-NSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCT 531
F D+ GY++ EL ++ I E D DND I +E+
Sbjct: 83 FGQLDQHPIDGYLSHTELA-PLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAG 136
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 544 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.92 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.9 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.9 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.89 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.88 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.88 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.87 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.87 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.87 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.86 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.86 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.85 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.84 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.83 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.82 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.82 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.81 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.8 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.79 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.79 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.78 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.78 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.78 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.77 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.76 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.75 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.74 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.74 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.73 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.73 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.72 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.72 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.72 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.71 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.71 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.71 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.7 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.67 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.64 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.62 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.57 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.51 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.51 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.49 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.49 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.49 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.48 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.47 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.46 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.45 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.45 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.45 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.45 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.42 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.42 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.42 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.41 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.41 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.41 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.41 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.41 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.4 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.4 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.4 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.39 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.39 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.38 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.36 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.3 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.29 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.27 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.26 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.25 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.25 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.24 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.23 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.23 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.22 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.21 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.19 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.19 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.15 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.14 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.13 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.12 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.11 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 99.09 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.07 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 99.07 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 99.07 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.07 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.07 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.06 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.06 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.06 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 99.05 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.05 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.05 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.03 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.03 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.03 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 99.03 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.03 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 99.03 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.03 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.01 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 98.99 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.98 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.95 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.93 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.93 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.91 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.91 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.88 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.88 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.86 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.86 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.85 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.85 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.84 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.81 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.79 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.78 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.78 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.78 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.77 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.77 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.76 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.76 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.75 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.75 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.73 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.7 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.69 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.69 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.68 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.62 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.61 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.59 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.58 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.58 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.57 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.57 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.54 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.53 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.45 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.44 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.42 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.39 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.26 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.25 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.22 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.21 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.13 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.03 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 97.99 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.98 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.9 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.8 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.7 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.69 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.28 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.95 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.63 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 95.92 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 95.76 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.72 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 94.94 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 92.64 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 91.42 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 88.62 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 87.55 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 86.77 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 85.9 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 81.05 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 80.36 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-61 Score=474.43 Aligned_cols=284 Identities=41% Similarity=0.709 Sum_probs=230.5
Q ss_pred cccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 009091 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 168 (544)
.+++.++|++++.||+|+||+||+|+++.+++.||||++.+.... .....+.+|+.+|+++. |||||++++++.+++
T Consensus 4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 80 (307)
T d1a06a_ 4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIK-HPNIVALDDIYESGG 80 (307)
T ss_dssp CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCC-CTTBCCEEEEEECSS
T ss_pred CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECC
Confidence 356778899999999999999999999999999999999765432 23456789999999997 999999999999999
Q ss_pred eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 169 SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
.+|||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+|+..
T Consensus 81 ~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999999999999889999999999999999999999999999999999999976666678999999999987
Q ss_pred cCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.........+||+.|||||++. ..|+.++|||||||++|||++|..||.+.........+..+...++.+.+..+|+++
T Consensus 161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 240 (307)
T d1a06a_ 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240 (307)
T ss_dssp ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHH
Confidence 7666666788999999999986 458999999999999999999999999999888999999988887777777899999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCcccHHHHHHHHHH
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~l~~~ 376 (544)
++||.+||++||.+|||++|+|+||||+... ..++.....+..+++++
T Consensus 241 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~~-~~~~~~~~~~~~~~~~~ 288 (307)
T d1a06a_ 241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKN 288 (307)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC-CCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHccCCHhHCcCHHHHhcCHhhCCCC-ccccccchhHHHHHHHH
Confidence 9999999999999999999999999998643 22333333333444443
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-61 Score=457.52 Aligned_cols=255 Identities=31% Similarity=0.616 Sum_probs=230.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++++++ |||||++++++.+++.+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999997665544556778899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+|.......
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~~kl~DFG~a~~~~~~~- 160 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSR- 160 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCSCSCCCCCC-
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec---CCCCEeecccceeeecCCCc-
Confidence 99999999999999988999999999999999999999999999999999999994 44579999999998765543
Q ss_pred eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....+||+.|||||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.+....++. .+++++++||.
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~ 236 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 236 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT----TSCHHHHHHHH
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCc----cCCHHHHHHHH
Confidence 346789999999999875 5899999999999999999999999998888888888887655443 57999999999
Q ss_pred HhcccCcCCCCChhhhhCCCccccC
Q 009091 333 KMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+||++||.+|||++|+|+||||++.
T Consensus 237 ~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHccCCHhHCcCHHHHHcCcCcCCc
Confidence 9999999999999999999999764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-60 Score=453.21 Aligned_cols=257 Identities=31% Similarity=0.520 Sum_probs=217.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|+++.+|+.||||++..... ....+.+.+|+.+|++++ ||||+++++++.+++.+|||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~iv 81 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLF 81 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCceeEEE
Confidence 469999999999999999999999999999999865432 233456889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+......
T Consensus 82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a~~~~~~~~ 158 (271)
T d1nvra_ 82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNR 158 (271)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECEETTE
T ss_pred EeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEEEccchhheeeccCCc
Confidence 99999999999998888899999999999999999999999999999999999994 44579999999998764332
Q ss_pred --ceecccCCccccCcccccc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 253 --VYRDIVGSAYYVAPEVLRR-S-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 253 --~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.....+||+.|||||++.+ . ++.++|||||||++|||++|+.||.................. ...++..++++++
T Consensus 159 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ 237 (271)
T d1nvra_ 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSAPL 237 (271)
T ss_dssp ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHHHH
T ss_pred cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCCHHHH
Confidence 2345689999999999864 3 467899999999999999999999876554433333333222 2334557899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+||.+||+.||++|||++|+|+||||++.
T Consensus 238 ~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 238 ALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 99999999999999999999999999864
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-59 Score=456.31 Aligned_cols=267 Identities=39% Similarity=0.708 Sum_probs=239.9
Q ss_pred ccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh---hcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK---QDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
+.+.++|++++.||+|+||+||+|+++.+|+.||||++.+...... ...+.+.+|+.+|++++ |||||++++++.+
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~ 84 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 84 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEE
Confidence 3466789999999999999999999999999999999976544322 34678999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCC-CccEEEeecCCc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLS 245 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~-~~~vkl~Dfg~a 245 (544)
.+.+|||||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++..+. ...+||+|||+|
T Consensus 85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence 9999999999999999999999889999999999999999999999999999999999999965442 346999999999
Q ss_pred ccccCCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.............||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+..+.+..+......++...+..+|
T Consensus 165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (293)
T d1jksa_ 165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244 (293)
T ss_dssp EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence 98877666667789999999999874 58999999999999999999999999999988899988887766655556789
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+++++||.+||++||.+|||++|+|+||||+..
T Consensus 245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999999999754
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-58 Score=449.44 Aligned_cols=256 Identities=29% Similarity=0.500 Sum_probs=223.5
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++.+.||+|+||+||+|.++.+|+.||||++.... ....+.+.+|+.+|+++. |||||++++++.+.+.+||
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i 94 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWV 94 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc---ChHHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCEEEE
Confidence 457999999999999999999999999999999986543 234577899999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-
Q 009091 173 VMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG- 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~- 251 (544)
|||||+||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+.....
T Consensus 95 vmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a~~~~~~~ 170 (293)
T d1yhwa1 95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQ 170 (293)
T ss_dssp EEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSTT
T ss_pred EEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEeeccchhheeecccc
Confidence 9999999999987765 5799999999999999999999999999999999999994 4457999999999887543
Q ss_pred CceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 330 (544)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+...... ....+..+++++++|
T Consensus 171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l 249 (293)
T d1yhwa1 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRDF 249 (293)
T ss_dssp CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHHHHH
T ss_pred ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHHHHH
Confidence 33456789999999999864 5899999999999999999999999988877766666554322 122334689999999
Q ss_pred HHHhcccCcCCCCChhhhhCCCccccC
Q 009091 331 VRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 331 i~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
|.+||++||.+|||++|+|+||||+..
T Consensus 250 i~~~L~~dP~~R~s~~eil~Hp~~~~~ 276 (293)
T d1yhwa1 250 LNRCLDMDVEKRGSAKELLQHQFLKIA 276 (293)
T ss_dssp HHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999999753
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5.4e-59 Score=463.43 Aligned_cols=264 Identities=34% Similarity=0.640 Sum_probs=238.5
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+. .....+.+.+|+.+|++|+ |||||++++++.+.+.+|
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 99 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 99 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC---SHHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEE
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc---chhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 445799999999999999999999999999999998543 2345678899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+ .++.+||+|||+|+.+..
T Consensus 100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TSCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-CCCeEEEeecchheeccc
Confidence 99999999999999854 4679999999999999999999999999999999999999643 235799999999998887
Q ss_pred CCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
........||+.|||||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...+..+++++++
T Consensus 179 ~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 258 (350)
T d1koaa2 179 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 258 (350)
T ss_dssp TSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHH
T ss_pred ccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 777777899999999999864 5899999999999999999999999999988999999888877776666789999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
||.+||.+||++|||++|+|+||||+....+
T Consensus 259 li~~~L~~dP~~R~t~~eil~hp~~~~~~~~ 289 (350)
T d1koaa2 259 FIRKLLLADPNTRMTIHQALEHPWLTPGNAP 289 (350)
T ss_dssp HHHHHCCSSGGGSCCHHHHHHSTTTSCTTCC
T ss_pred HHHHHccCChhHCcCHHHHhcCcccCCCCCC
Confidence 9999999999999999999999999976543
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-59 Score=452.58 Aligned_cols=256 Identities=33% Similarity=0.549 Sum_probs=227.2
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|.++.+++.||||++.+.........+.+.+|+.+|++++ ||||+++++++.+++.+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999997655444556678999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC--
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-- 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-- 251 (544)
||||+||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 44567999999999876532
Q ss_pred -CceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 252 -KVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
......+||+.|+|||++. ..++.++|||||||++|||++|..||.+.+...++..+..+...++. .+++++++
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~ 239 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARD 239 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT----TCCHHHHH
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc----cCCHHHHH
Confidence 2234568999999999986 46899999999999999999999999999888888888887665543 57999999
Q ss_pred HHHHhcccCcCCCCChhh------hhCCCccccC
Q 009091 330 LVRKMLIQDPKKRITSAE------VLEHPWMREG 357 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~e------ll~hp~f~~~ 357 (544)
||.+||++||.+|||++| +++||||+.-
T Consensus 240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 999999999999999998 5789999764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.9e-58 Score=445.02 Aligned_cols=262 Identities=37% Similarity=0.675 Sum_probs=237.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC------hhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN------KQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~------~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
.++|++.+.||+|+||+||+|++..+++.||||++.+..... ....+.+.+|+.+++++..||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 467999999999999999999999999999999997654322 12235688999999999889999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
++.+|||||||+||+|.+++..++.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999 455679999999999
Q ss_pred cccCCCceecccCCccccCcccccc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCc
Q 009091 247 FIDEGKVYRDIVGSAYYVAPEVLRR-------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319 (544)
Q Consensus 247 ~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 319 (544)
.+.........+||+.|+|||.+.+ .++.++||||+||++|+|++|+.||.+.+.......+..+...++.+.
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 238 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 238 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence 8877666667889999999998752 368899999999999999999999999998888889998888777777
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+..+|+++++||.+||++||.+|||++|+|+||||++.
T Consensus 239 ~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 239 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 77899999999999999999999999999999999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-58 Score=443.11 Aligned_cols=254 Identities=23% Similarity=0.426 Sum_probs=218.9
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~~~ 170 (544)
+|++.++||+|+||+||+|.+..++..||+|++..... .....+.+.+|+++|++++ |||||++++++.. ...+
T Consensus 10 y~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~ 87 (270)
T d1t4ha_ 10 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCI 87 (270)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEE
T ss_pred EEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEE
Confidence 45888899999999999999999999999999866543 3455678999999999997 9999999999865 4568
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
|||||||+||+|.+++...+.+++..++.++.||+.||+|||+++ |+||||||+|||++.. ++.+||+|||+|+..
T Consensus 88 ~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~--~~~~Kl~DFGla~~~ 165 (270)
T d1t4ha_ 88 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATLK 165 (270)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESST--TSCEEECCTTGGGGC
T ss_pred EEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCC--CCCEEEeecCcceec
Confidence 999999999999999999889999999999999999999999998 9999999999999532 357999999999865
Q ss_pred cCCCceecccCCccccCcccccccCCCcchHHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHhCCccCCCCcccCCCHHH
Q 009091 249 DEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 249 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
... .....+||+.|||||++.+.++.++|||||||++|||++|+.||.+.... .+...+..+..+ ......+++++
T Consensus 166 ~~~-~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 242 (270)
T d1t4ha_ 166 RAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEV 242 (270)
T ss_dssp CTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHH
T ss_pred cCC-ccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC--cccCccCCHHH
Confidence 433 34567899999999999989999999999999999999999999876544 445555444322 22234578999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
++||.+||++||++|||++|+|+||||+
T Consensus 243 ~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 243 KEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 9999999999999999999999999996
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1e-58 Score=453.69 Aligned_cols=257 Identities=25% Similarity=0.416 Sum_probs=227.6
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..+.|++.+.||+|+||+||+|++..+++.||||++.+.........+.+.+|+.+|++++ |||||++++++.+++.+|
T Consensus 13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ 91 (309)
T d1u5ra_ 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 91 (309)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEE
T ss_pred cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEECCEEE
Confidence 3456999999999999999999999999999999997655444555678899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+|......
T Consensus 92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~---~~~~Kl~DFG~a~~~~~~ 168 (309)
T d1u5ra_ 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---PGLVKLGDFGSASIMAPA 168 (309)
T ss_dssp EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET---TTEEEECCCTTCBSSSSB
T ss_pred EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECC---CCCEEEeecccccccCCC
Confidence 99999999999888788888999999999999999999999999999999999999954 458999999999876542
Q ss_pred CceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 252 KVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 252 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
...+||+.|||||++. +.|+.++|||||||++|||++|..||.+......+..+..+...... ...+++++
T Consensus 169 ---~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~ 243 (309)
T d1u5ra_ 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--SGHWSEYF 243 (309)
T ss_dssp ---CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS--CTTSCHHH
T ss_pred ---CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCCCHHH
Confidence 3568999999999984 34899999999999999999999999988888877777776543332 23679999
Q ss_pred HHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++||.+||++||.+|||++|+|+||||+..
T Consensus 244 ~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 999999999999999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.3e-58 Score=459.20 Aligned_cols=263 Identities=31% Similarity=0.621 Sum_probs=237.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.++|++++.||+|+||+||+|++..+|+.||||++.+.. ......+.+|+.+|++|. |||||++++++.+++.+|
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ 102 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMV 102 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3456999999999999999999999999999999986532 344567889999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||||+||+|.+.+...+ .+++..++.++.||+.||.|||++||+||||||+||||+.. ..+.+||+|||+|.....
T Consensus 103 ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~-~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNP 181 (352)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCT
T ss_pred EEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc-CCCeEEEeecccceecCC
Confidence 9999999999998876654 69999999999999999999999999999999999999542 345799999999998887
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
........||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+..+..+...++...+..+++++++
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 261 (352)
T d1koba_ 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 261 (352)
T ss_dssp TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred CCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 77777789999999999986 45899999999999999999999999999999999999988887777767789999999
Q ss_pred HHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
||.+||++||.+|||++|+|+||||+....
T Consensus 262 li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 262 FIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 999999999999999999999999987543
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-58 Score=447.71 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=224.3
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++++.||+|+||+||+|+++.++..||||++... .....+.+.+|+++|++++ |||||++++++.+++.++|
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 86 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWI 86 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---SSGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCeEEE
Confidence 35699999999999999999999999999999998653 2344567889999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 87 vmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 87 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECHHH
T ss_pred EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEEEEechhhhccCCC
Confidence 9999999999998765 45699999999999999999999999999999999999994 4457999999999765432
Q ss_pred -CceecccCCccccCccccc------ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 252 -KVYRDIVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
......+||+.|+|||++. ..|+.++|||||||++|||++|+.||.+.+..+.+..+..+..... .....++
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s 242 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWS 242 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-SSGGGSC
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CccccCC
Confidence 1223568999999999873 3478999999999999999999999999888888888877654322 2234689
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
+++++||.+||++||.+|||++|+|+||||+..
T Consensus 243 ~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 243 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999999999753
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-57 Score=451.36 Aligned_cols=255 Identities=32% Similarity=0.550 Sum_probs=231.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++. ||||+++++++.+.+.+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC-CCCEEEEEeeeccccccccc
Confidence 35999999999999999999999999999999997765544556788899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC-CC
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~ 252 (544)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.... ..
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 4556899999999987643 34
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
.....+||+.|+|||++. ..|+.++|||||||++|||++|..||.+.+...++..+..+...++. .+|+++++||
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~dli 236 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCc----cCCHHHHHHH
Confidence 445678999999999986 56999999999999999999999999999999999998888766543 5899999999
Q ss_pred HHhcccCcCCCCC-----hhhhhCCCcccc
Q 009091 332 RKMLIQDPKKRIT-----SAEVLEHPWMRE 356 (544)
Q Consensus 332 ~~~l~~dp~~Rps-----~~ell~hp~f~~ 356 (544)
.+||++||.+|++ ++++++||||+.
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~ 266 (337)
T d1o6la_ 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HhhccCCchhhcccccccHHHHHcCccccc
Confidence 9999999999995 899999999975
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.6e-57 Score=445.49 Aligned_cols=254 Identities=29% Similarity=0.579 Sum_probs=230.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|++++ |||||++++++.+.+.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCeeeeE
Confidence 35999999999999999999999999999999997655444556788999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||||+||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||| +.++.+||+|||+|+.....
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~-- 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV-- 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc--
Confidence 9999999999999999999999999999999999999999999999999999999 44567999999999887553
Q ss_pred eecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+.+..+....+..+...++. .++++++++|.
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~ 233 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLS 233 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC----CCCHHHHHHHH
Confidence 345789999999999875 5899999999999999999999999999998899998887665442 57999999999
Q ss_pred HhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 333 KMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+||.+||.+|+ |++++|+||||++-
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 99999999996 99999999999763
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-58 Score=450.08 Aligned_cols=262 Identities=29% Similarity=0.589 Sum_probs=236.9
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
++.++|++++.||+|+||+||+|.++.+++.||||++.+. ......+.+|+.+|+.++ |||||++++++.+.+.+
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~----~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~ 76 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIAR-HRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEE
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCC----cccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 4567899999999999999999999999999999998653 233456889999999997 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.+ ....+||+|||++....
T Consensus 77 ~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~-~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC-CceEEEEcccchhhccc
Confidence 99999999999999997765 69999999999999999999999999999999999999653 34579999999999887
Q ss_pred CCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 250 EGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 250 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.........||+.|+|||.+. ..++.++|||||||++|+|++|..||.+.+....+..+..+...++...+..++++++
T Consensus 156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T d1tkia_ 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence 766666778999999999876 5689999999999999999999999999999999999999887777666667899999
Q ss_pred HHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
+||.+||.+||.+|||++|+|+||||++..
T Consensus 236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 265 (321)
T d1tkia_ 236 DFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence 999999999999999999999999998654
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-57 Score=437.81 Aligned_cols=253 Identities=28% Similarity=0.495 Sum_probs=210.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~ 171 (544)
+.|++.+.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+++|+++. |||||++++++.+ .+.+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEEE
Confidence 459999999999999999999999999999999876543 3445678899999999997 9999999999864 46789
Q ss_pred EEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcC-----CEeecCCCCceeeecCCCCccEEEeec
Q 009091 172 LVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMG-----VMHRDLKPENFLLSNKDGGAMLKATDF 242 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~-----ivHrDikp~Nill~~~~~~~~vkl~Df 242 (544)
||||||+||+|.+++.. ...+++..++.++.||+.||.|||+.| |+||||||+|||++ .++.+||+||
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~---~~~~vkl~DF 158 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDF 158 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC---TTSCEEECCH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC---CCCcEEEeec
Confidence 99999999999998864 457999999999999999999999976 99999999999994 4567999999
Q ss_pred CCcccccCCC-ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 243 GLSVFIDEGK-VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 243 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
|+|+...... .....+||+.|||||++. ..|+.++|||||||++|||+||..||.+.+..++...+..+..... +
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~---~ 235 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI---P 235 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC---C
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---C
Confidence 9998876433 334578999999999986 4689999999999999999999999999888888888877755322 2
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcc
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 354 (544)
..+++++.+||.+||+.||.+|||++|+|+|||+
T Consensus 236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 3589999999999999999999999999999995
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-58 Score=450.92 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=216.2
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
..++|++.+.||+|+||+||+|++..+|..||+|++.+.. .......+.+|+.+|++++ |||||+++++|.+++.+|
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 80 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEIS 80 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 4567999999999999999999999999999999986542 3445678899999999997 999999999999999999
Q ss_pred EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||||+||+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||||+|||++ .++.+||+|||+|+...+
T Consensus 81 iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHHHH
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC---CCCCEEEeeCCCccccCC
Confidence 999999999999999998899999999999999999999997 5999999999999994 456799999999987654
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHH-----------------------
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD----------------------- 306 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~----------------------- 306 (544)
. ...+.+||+.|+|||++. ..|+.++||||+||++|||++|+.||.+........
T Consensus 158 ~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1s9ja_ 158 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236 (322)
T ss_dssp H-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred C-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence 2 234579999999999986 469999999999999999999999997754332110
Q ss_pred -------------------HHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 307 -------------------AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 307 -------------------~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
.+... ..+..+...++.++++||.+||..||.+|||++|+|+||||++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 237 LSSYGMDSRPPMAIFELLDYIVNE--PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp ---------CCCCHHHHHHHHHTS--CCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred ccccccccccchhHHHHHhhhhcc--CCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 00000 00111122468899999999999999999999999999999864
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-56 Score=446.93 Aligned_cols=254 Identities=31% Similarity=0.561 Sum_probs=229.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+. |||||++++++...+.+++|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC-CCcEeecccccccccccccc
Confidence 45999999999999999999999999999999997655444556678899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
|||+.||+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~-- 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC--
T ss_pred cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc--
Confidence 9999999999999998999999999999999999999999999999999999999 44568999999999987643
Q ss_pred eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHH
Q 009091 254 YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332 (544)
Q Consensus 254 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 332 (544)
....+||+.|||||++. ..++.++|||||||++|||+||..||.+.+....+..+..+...++ ..+++++.+||+
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 270 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLR 270 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHH
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHHH
Confidence 34568999999999986 4589999999999999999999999999988888888888765543 358999999999
Q ss_pred HhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 333 KMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 333 ~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+||.+||.+|+ |++++++||||+..
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHhhhCHHhccccccccHHHHHcCccccCC
Confidence 99999999995 99999999999753
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-57 Score=447.87 Aligned_cols=265 Identities=34% Similarity=0.589 Sum_probs=224.1
Q ss_pred ccccceec-ceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 009091 92 IRQFYTLG-KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED---- 166 (544)
Q Consensus 92 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 166 (544)
+.+.|.+. +.||+|+||+||+|++..+++.||||++.+ ...+.+|+.++.++.+|||||+++++|.+
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~--------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~ 80 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 80 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC--------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccC
Confidence 34568876 469999999999999999999999999843 23567899998877669999999999875
Q ss_pred CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
...+|||||||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++..+..+.+||+|||+
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~ 160 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 160 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccce
Confidence 46789999999999999999875 3699999999999999999999999999999999999998766677899999999
Q ss_pred cccccCCCceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHH----HHhCCccCCCCc
Q 009091 245 SVFIDEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDA----ILKGGVDFESEP 319 (544)
Q Consensus 245 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~----i~~~~~~~~~~~ 319 (544)
|+...........+||+.|+|||++.+ .|+.++|||||||++|+|+||..||.+......... +..+...++.+.
T Consensus 161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (335)
T d2ozaa1 161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 240 (335)
T ss_dssp CEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTH
T ss_pred eeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc
Confidence 998777666667899999999999864 599999999999999999999999987665444333 334455555555
Q ss_pred ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 320 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
+..+++++++||.+||++||++|||+.|+|+||||++.......+
T Consensus 241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~ 285 (335)
T d2ozaa1 241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 285 (335)
T ss_dssp HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCE
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCC
Confidence 667899999999999999999999999999999998765443333
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-56 Score=438.79 Aligned_cols=257 Identities=28% Similarity=0.478 Sum_probs=226.6
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|.+++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..++.+..+|||||++++++.+++.+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 45999999999999999999999999999999997654434455667778888776433499999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC-C
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-K 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~ 252 (544)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++..... .
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 44567999999999876543 3
Q ss_pred ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 253 VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
......||+.|+|||++. ..|+.++|||||||++|+|++|+.||.+.+...+...+..+...++ ..+++++++||
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 234 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 234 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 344568999999999986 4689999999999999999999999999999888888887765443 25799999999
Q ss_pred HHhcccCcCCCCChh-hhhCCCccccC
Q 009091 332 RKMLIQDPKKRITSA-EVLEHPWMREG 357 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~-ell~hp~f~~~ 357 (544)
.+||++||.+|||+. ++++||||+.-
T Consensus 235 ~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 235 VKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhcccCCCCCcCHHHHHHhCchhccC
Confidence 999999999999996 89999999763
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.8e-56 Score=443.74 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=216.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHH---HHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE---IQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E---~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.|++++.||+|+||+||+|++..+|+.||||++.+...........+.+| +.+++.+. |||||++++++...+.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEEEECCEE
Confidence 359999999999999999999999999999999976544333344445555 55566665 99999999999999999
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999 4556799999999987765
Q ss_pred CCceecccCCccccCccccc-c-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-R-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
.. ....+||+.|+|||++. + .|+.++|||||||+||||+||+.||.+......... ...........+..++++++
T Consensus 160 ~~-~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~ 237 (364)
T d1omwa3 160 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTMAVELPDSFSPELR 237 (364)
T ss_dssp SC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSSSCCCCCCSSSCHHHH
T ss_pred Cc-ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHHHH
Confidence 43 34568999999999985 3 489999999999999999999999987654433322 22222223333346899999
Q ss_pred HHHHHhcccCcCCCCC-----hhhhhCCCccccC
Q 009091 329 DLVRKMLIQDPKKRIT-----SAEVLEHPWMREG 357 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps-----~~ell~hp~f~~~ 357 (544)
+||.+||++||.+||| ++|+++||||+..
T Consensus 238 ~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp HHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred HHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 9999999999999999 7999999999753
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-55 Score=431.38 Aligned_cols=260 Identities=27% Similarity=0.365 Sum_probs=214.3
Q ss_pred cceecccCCeEEEEEEECCCCCeEEEEEEeeccccCh--hcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 009091 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK--QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMEL 176 (544)
Q Consensus 99 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 176 (544)
++.||+|+||+||+|+++.+|+.||||++........ .....+.+|+.+|+++. |||||++++++..++.+||||||
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEEC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC-CCCEeEEEeeeccCCceeehhhh
Confidence 4789999999999999999999999999865432211 12346889999999997 99999999999999999999999
Q ss_pred cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-cee
Q 009091 177 CSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-VYR 255 (544)
Q Consensus 177 ~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~~ 255 (544)
+.|+++..+......+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+...... ...
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCccccc
Confidence 9988777666666779999999999999999999999999999999999999 455679999999998765432 334
Q ss_pred cccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC---------------
Q 009091 256 DIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE--------------- 318 (544)
Q Consensus 256 ~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~--------------- 318 (544)
..+||+.|+|||++. ..|+.++|||||||++|||++|..||.+.+..+.+..+.+........
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 568999999999875 347999999999999999999999999988888777765421111100
Q ss_pred ---------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 319 ---------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 319 ---------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
....+++++++||.+||+.||++|||++|+|+||||++.+.+.+
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~~ 291 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP 291 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCC
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCCCC
Confidence 01246889999999999999999999999999999998765443
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-55 Score=421.05 Aligned_cols=252 Identities=31% Similarity=0.549 Sum_probs=215.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChh---cHHHHHHHHHHHHhcc-CCCCeeEEEEEEEeCC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQIMQHLS-GQQNIVEFRGAYEDRQ 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~---~~~~~~~E~~~l~~l~-~h~~iv~~~~~~~~~~ 168 (544)
.++|++++.||+|+||+||+|++..+|+.||||++.+....... ....+.+|+.+|+++. .|||||++++++.+.+
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~ 82 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 82 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence 45799999999999999999999999999999999765433221 1234668999999986 4899999999999999
Q ss_pred eEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 SVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 ~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.+++||||+.+ +++.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.+ .+.+||+|||+|..
T Consensus 83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~--~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEE
T ss_pred eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC--CCeEEECcccccee
Confidence 99999999976 5788888888899999999999999999999999999999999999999643 24799999999987
Q ss_pred ccCCCceecccCCccccCcccccc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCH
Q 009091 248 IDEGKVYRDIVGSAYYVAPEVLRR-S-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325 (544)
Q Consensus 248 ~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (544)
.... .....+||+.|+|||++.+ . ++.++|||||||++|||++|+.||... ..+..+...++ ..+|+
T Consensus 161 ~~~~-~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~----~~~s~ 229 (273)
T d1xwsa_ 161 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR----QRVSS 229 (273)
T ss_dssp CCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCS----SCCCH
T ss_pred cccc-cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCC----CCCCH
Confidence 5543 3456789999999999864 3 467899999999999999999999753 23455544433 35899
Q ss_pred HHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 326 ~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
++++||.+||++||++|||++|+|+||||++.
T Consensus 230 ~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 99999999999999999999999999999865
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.6e-54 Score=417.86 Aligned_cols=260 Identities=26% Similarity=0.353 Sum_probs=219.3
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ--- 168 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--- 168 (544)
+.++|++.+.||+|+||+||+|.+..+++.||||++.+...........+.+|+.+++.++ ||||+++++++...+
T Consensus 5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~~ 83 (277)
T d1o6ya_ 5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAG 83 (277)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSSS
T ss_pred ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC-CCCCCcccceeeeccCCC
Confidence 5677999999999999999999999999999999997765555566678999999999997 999999999987643
Q ss_pred -eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccc
Q 009091 169 -SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVF 247 (544)
Q Consensus 169 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~ 247 (544)
.+|||||||+|++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++. +..++|+|||.+..
T Consensus 84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~---~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARA 160 (277)
T ss_dssp EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---TSCEEECCCTTCEE
T ss_pred ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCc---cccceeehhhhhhh
Confidence 48999999999999999999999999999999999999999999999999999999999954 44699999999876
Q ss_pred ccCCC----ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccC
Q 009091 248 IDEGK----VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 248 ~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
..... .....+||+.|+|||++.+ .++.++|||||||++|+|+||..||.+.+..+....+.......+...+..
T Consensus 161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T d1o6ya_ 161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 240 (277)
T ss_dssp CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSS
T ss_pred hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccC
Confidence 54322 2345689999999999864 589999999999999999999999999888888888877766555555567
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCCCccc
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 355 (544)
+|+++.+||.+||++||.+||+..+.|.|+|.+
T Consensus 241 ~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 241 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 899999999999999999999655556677764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-54 Score=418.64 Aligned_cols=263 Identities=24% Similarity=0.394 Sum_probs=215.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+.||+|+||+||+|.+..+|+.||||++.... ......+.+.+|+.+|+++. |||||++++++.+++.+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cChHHHHHHHHHHHHHHhCC-CCcEEEeccccccccceeEE
Confidence 46999999999999999999999999999999996543 22334578889999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 174 MELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||+.+ .+..++.. ...+++..++.++.||+.||.|||++|||||||||+|||++ .+..+||+|||+|+.....
T Consensus 80 ~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~---~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 80 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTHHHHHCCC
T ss_pred EeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec---ccCcceeccCCcceeccCC
Confidence 999976 44455443 35699999999999999999999999999999999999994 4457999999999876543
Q ss_pred -CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCC----------
Q 009091 252 -KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE---------- 318 (544)
Q Consensus 252 -~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~---------- 318 (544)
.......||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+....+..+..........
T Consensus 156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (298)
T d1gz8a_ 156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235 (298)
T ss_dssp SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence 3334568999999999865 336889999999999999999999999888777666554321111100
Q ss_pred ---------------cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 319 ---------------PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 319 ---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
....+++++++||.+||.+||++|||++|+|+||||++...+-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p~p 294 (298)
T d1gz8a_ 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294 (298)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCCC
T ss_pred cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCCCC
Confidence 01246789999999999999999999999999999998765543
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-53 Score=411.47 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=210.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++++.||+|+||+||+|.++.+++.||||++... ....+.+.+|+.+|++++ |||||++++++.+++.++|
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~----~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT----CSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEE
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc----cchHHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeEE
Confidence 45699999999999999999999999999999988543 334678999999999997 9999999999999999999
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||||+ .++.+||+|||+|+....
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCCTTTCCS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC---CCCcEEEccccceeecCC
Confidence 99999999999999764 5689999999999999999999999999999999999994 456899999999987655
Q ss_pred CCce--ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHH
Q 009091 251 GKVY--RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327 (544)
Q Consensus 251 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 327 (544)
.... ....||+.|+|||++. +.|+.++|||||||++|||++|..||...........+.......+. ...+++++
T Consensus 168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l 245 (287)
T d1opja_ 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER--PEGCPEKV 245 (287)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHH
T ss_pred CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCC--CccchHHH
Confidence 4322 2346889999999875 67999999999999999999987776655444433333443333332 24689999
Q ss_pred HHHHHHhcccCcCCCCChhhhhC
Q 009091 328 KDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 328 ~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.+||.+||+.||.+|||++++++
T Consensus 246 ~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 246 YELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999999999999999999965
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-53 Score=415.44 Aligned_cols=262 Identities=24% Similarity=0.335 Sum_probs=213.9
Q ss_pred cccceecceecccCCeEEEEEEECCC-CCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe---
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENST-GNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEFRGAYED--- 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~--- 166 (544)
.++|++++.||+|+||+||+|++..+ ++.||||++...... ......+.+|+.+|+.|. +||||+++++++..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 46799999999999999999999765 567999998664332 222345668888888774 59999999999853
Q ss_pred --CCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecC
Q 009091 167 --RQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFG 243 (544)
Q Consensus 167 --~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg 243 (544)
...++++|||+.++++...... ...+++..++.++.|++.||+|||++||+||||||+|||+ +..+.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchh
Confidence 3578999999988766544333 4569999999999999999999999999999999999999 444579999999
Q ss_pred CcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC------
Q 009091 244 LSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE------ 316 (544)
Q Consensus 244 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~------ 316 (544)
++............+||+.|+|||++. ..|+.++|||||||++|||++|..||.+.+....+..+........
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence 998776655566789999999999875 5699999999999999999999999999888777766643211000
Q ss_pred -----------------CCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 317 -----------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 317 -----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
......+++.+++||.+||++||++|||++|+|+||||++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 001234688999999999999999999999999999998753
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.5e-53 Score=412.13 Aligned_cols=257 Identities=30% Similarity=0.451 Sum_probs=213.8
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++.+.||+|+||+||+|+++ +++.||||++..... .....+.+.+|+.+|++++ ||||+++++++...+..+++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCceeEE
Confidence 47999999999999999999986 789999999965432 3344578899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
|||+.++.+..+....+.+++..++.++.||+.||+|||+.||+||||||+|||+ +.++.+||+|||.+.......
T Consensus 79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC---
T ss_pred EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCcc
Confidence 9999887776666667889999999999999999999999999999999999999 445679999999998765432
Q ss_pred ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC-------------
Q 009091 253 VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES------------- 317 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~------------- 317 (544)
......|++.|+|||.+. ..++.++|||||||++|||++|+.||.+.+....+..+.........
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence 234457999999999885 34799999999999999999999999988877766665432111100
Q ss_pred ------------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCcccc
Q 009091 318 ------------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356 (544)
Q Consensus 318 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 356 (544)
.....+++.+++||++||++||++|||++|+|+||||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 011246889999999999999999999999999999975
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-53 Score=409.37 Aligned_cols=250 Identities=23% Similarity=0.376 Sum_probs=204.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++++.||+|+||+||+|+.. ..||||++..... .....+.+.+|+.+|++++ |||||++++++.. +.++|
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~~-~~~~l 80 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTA-PQLAI 80 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SSCEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCEeeeeEEEec-cEEEE
Confidence 456999999999999999999854 3699999865432 3455778999999999997 9999999998754 56899
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||||+||+|.+++... ..+++..+..++.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.....
T Consensus 81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSSEEECCCCCSCC----
T ss_pred EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCCEEEccccceeecccc
Confidence 99999999999999764 5699999999999999999999999999999999999994 4467999999999876532
Q ss_pred ---CceecccCCccccCccccc----ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC--CCcccC
Q 009091 252 ---KVYRDIVGSAYYVAPEVLR----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE--SEPWLL 322 (544)
Q Consensus 252 ---~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~ 322 (544)
.......||+.|||||++. +.|+.++|||||||+||||+||+.||.+......+..+.......+ ......
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 237 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTT
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcccc
Confidence 2234568999999999985 3478899999999999999999999988766555444443322222 122346
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++++.+||.+||+.||.+|||+++|+++
T Consensus 238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 78999999999999999999999999876
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-53 Score=419.17 Aligned_cols=252 Identities=24% Similarity=0.408 Sum_probs=212.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCC-----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGN-----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++++.||+|+||+||+|++..+++ .||+|.+.... .......+.+|+.+|.++.+|||||++++++.+.
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence 3569999999999999999999876554 58999875432 2334567889999999996699999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCC
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG-----------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPE 224 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~ 224 (544)
+.++||||||+||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~ 193 (325)
T d1rjba_ 114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193 (325)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchh
Confidence 99999999999999999997642 4789999999999999999999999999999999
Q ss_pred ceeeecCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCC
Q 009091 225 NFLLSNKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAE 299 (544)
Q Consensus 225 Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~ 299 (544)
|||++ .++.+||+|||+|+....... .....||+.|||||++. +.++.++|||||||++|||+| |..||.+.
T Consensus 194 Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~ 270 (325)
T d1rjba_ 194 NVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270 (325)
T ss_dssp GEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ccccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence 99994 446899999999987654332 23457899999999885 679999999999999999998 89999887
Q ss_pred ChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 300 TEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 300 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
.....+..+......++.+ ..+++++++||.+||+.||++|||++||++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~p--~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 271 PVDANFYKLIQNGFKMDQP--FYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CCSHHHHHHHHTTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCCC--CcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7766666676666554433 3679999999999999999999999999875
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-52 Score=409.73 Aligned_cols=250 Identities=22% Similarity=0.391 Sum_probs=202.4
Q ss_pred cccceecceecccCCeEEEEEEECCCCC---eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGN---SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.+.|++.+.||+|+||+||+|.++.+++ .||||.+.... .....+.+.+|+.+|++++ |||||++++++...+.
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~ 101 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTP 101 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCE
Confidence 3569999999999999999999987665 57888774332 3445678999999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
++||||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+|+..
T Consensus 102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 178 (299)
T d1jpaa_ 102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFL 178 (299)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEc
Confidence 99999999999999988774 469999999999999999999999999999999999999 55568999999999876
Q ss_pred cCCCce------ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcc
Q 009091 249 DEGKVY------RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320 (544)
Q Consensus 249 ~~~~~~------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 320 (544)
...... ....||+.|||||++. +.++.++|||||||++|||+| |..||.+....++...+..+.. . +..
T Consensus 179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~-~--~~~ 255 (299)
T d1jpaa_ 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR-L--PPP 255 (299)
T ss_dssp -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-C--CCC
T ss_pred cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCC
Confidence 543221 1246799999999986 568999999999999999998 8999999888888887766532 2 223
Q ss_pred cCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 321 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..+++++.+||.+||+.||.+|||+.+++++
T Consensus 256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 4689999999999999999999999998764
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-53 Score=406.24 Aligned_cols=246 Identities=25% Similarity=0.314 Sum_probs=205.6
Q ss_pred ceecccCCeEEEEEEEC--CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 009091 100 KELGRGQFGITYLCTEN--STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELC 177 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 177 (544)
++||+|+||+||+|.+. .+++.||||++.... ......+.+.+|+.+|++++ |||||++++++.. +.++||||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~-~~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEES-SSEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCC-CCCCceEEEEecc-CCEEEEEEcC
Confidence 46999999999999864 345789999985443 23445678999999999997 9999999999965 4578999999
Q ss_pred CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCce---
Q 009091 178 SGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY--- 254 (544)
Q Consensus 178 ~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~--- 254 (544)
++|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++........
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~---~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccc---cCcccccchhhhhhcccccccccc
Confidence 99999999999899999999999999999999999999999999999999954 457999999999876543222
Q ss_pred -ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHH
Q 009091 255 -RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331 (544)
Q Consensus 255 -~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 331 (544)
....||+.|||||++. +.++.++|||||||++|||+| |..||.+.+..++...+..+... +. ...+++++.+||
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~-~~--p~~~~~~~~~li 243 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM-GC--PAGCPREMYDLM 243 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-CC--CTTCCHHHHHHH
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC-CC--CcccCHHHHHHH
Confidence 2357899999999885 568999999999999999998 89999998888877777665322 22 236899999999
Q ss_pred HHhcccCcCCCCChhhh---hCCCcc
Q 009091 332 RKMLIQDPKKRITSAEV---LEHPWM 354 (544)
Q Consensus 332 ~~~l~~dp~~Rps~~el---l~hp~f 354 (544)
.+||+.||.+|||+++| |+|+|+
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 99999999999999998 456665
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-52 Score=413.40 Aligned_cols=265 Identities=27% Similarity=0.407 Sum_probs=214.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED------ 166 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------ 166 (544)
.++|++++.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+|++++ ||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-TTSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHHhc-CCCccceEeeeeccccccc
Confidence 3679999999999999999999999999999999866543 2344567889999999997 9999999998854
Q ss_pred --CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCC
Q 009091 167 --RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL 244 (544)
Q Consensus 167 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~ 244 (544)
.+.+|+||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~---~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec---CCCcEEeeecce
Confidence 456899999998876665555567799999999999999999999999999999999999994 456799999999
Q ss_pred cccccCC-----CceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCC
Q 009091 245 SVFIDEG-----KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFES 317 (544)
Q Consensus 245 a~~~~~~-----~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 317 (544)
+...... ......+||+.|+|||++. ..++.++|||||||++|||++|+.||.+.........+......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9866532 1223457999999999875 35899999999999999999999999988877766665443222221
Q ss_pred Cccc----------------------------CCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCC
Q 009091 318 EPWL----------------------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362 (544)
Q Consensus 318 ~~~~----------------------------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 362 (544)
..+. ..++++++||.+||++||++|||++|+|+||||++.+.|.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p~~ 316 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 316 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCCCC
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCCCC
Confidence 1110 13678899999999999999999999999999998765543
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-52 Score=405.22 Aligned_cols=253 Identities=26% Similarity=0.327 Sum_probs=212.6
Q ss_pred ccceecc-eecccCCeEEEEEEECC--CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGK-ELGRGQFGITYLCTENS--TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~-~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.|.+.+ +||+|+||+||+|.++. ++..||||++... ......+.+.+|+.+|++++ |||||++++++.. +.+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~-~~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EAL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh--cCHHHHHHHHHHHHHHHhCC-CCCEeeEeeeecc-CeE
Confidence 4577777 49999999999998764 3457999998543 23455678999999999997 9999999999865 468
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
|||||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+|+...
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~---~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN---RHYAKISDFGLSKALG 160 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE---TTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeecc---CCceeeccchhhhccc
Confidence 9999999999999987654 56999999999999999999999999999999999999954 4579999999998775
Q ss_pred CCCce----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKVY----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
..... ....||+.|+|||++. +.++.++|||||||++|||+| |..||.+.+..++...+..+... +. ...+
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~-~~--p~~~ 237 (285)
T d1u59a_ 161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM-EC--PPEC 237 (285)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC-CC--CTTC
T ss_pred ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CC--CCcC
Confidence 43322 2346899999999986 568999999999999999998 89999988888887777765432 22 2368
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhh---hCCCcccc
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEV---LEHPWMRE 356 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~el---l~hp~f~~ 356 (544)
++++.+||.+||+.||++|||+.++ |+|+|+.-
T Consensus 238 ~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888 67888753
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-52 Score=420.09 Aligned_cols=264 Identities=25% Similarity=0.426 Sum_probs=212.4
Q ss_pred CcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
....+.++|++++.||+|+||+||+|.++.+|+.||||++.+.. ......+.+.+|+.+|+++. |||||+++++|...
T Consensus 12 ~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpniv~l~~~~~~~ 89 (346)
T d1cm8a_ 12 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPD 89 (346)
T ss_dssp SEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSC
T ss_pred ceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcC-CCCeeEEEEEeccC
Confidence 34457889999999999999999999999999999999986533 34455678899999999997 99999999999765
Q ss_pred C------eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEee
Q 009091 168 Q------SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241 (544)
Q Consensus 168 ~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~D 241 (544)
+ .+||||||| +.+|..++ ..+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 90 ~~~~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~D 164 (346)
T d1cm8a_ 90 ETLDDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILD 164 (346)
T ss_dssp SSTTTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECC
T ss_pred ccccccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---cccccccccc
Confidence 4 579999999 55676655 45689999999999999999999999999999999999999 4556799999
Q ss_pred cCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc------
Q 009091 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV------ 313 (544)
Q Consensus 242 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~------ 313 (544)
||+|+..... ....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+....+..+.....
T Consensus 165 fg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 242 (346)
T d1cm8a_ 165 FGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242 (346)
T ss_dssp CTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ccceeccCCc--cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHH
Confidence 9999876543 345789999999998753 478999999999999999999999988876655544332111
Q ss_pred -----------------cCCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCC
Q 009091 314 -----------------DFESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360 (544)
Q Consensus 314 -----------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 360 (544)
..... ....+++++.+||.+||..||.+|||++|+|+||||+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~ 310 (346)
T d1cm8a_ 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 310 (346)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred HhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence 11111 113568999999999999999999999999999999876433
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-52 Score=400.23 Aligned_cols=246 Identities=24% Similarity=0.388 Sum_probs=200.4
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++++.||+|+||+||+|.+. ++..||||++... ....+.+.+|+.++++++ |||||++++++..++.++||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~----~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREG----AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSS----SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCC----cCcHHHHHHHHHHHHhcC-CCCcccccceeccCCceEEE
Confidence 35899999999999999999986 5678999998542 334567999999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC
Q 009091 174 MELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~ 252 (544)
||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++......
T Consensus 79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC---------
T ss_pred EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCC
Confidence 9999999999998765 558899999999999999999999999999999999999 445689999999998765433
Q ss_pred c--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 253 V--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSG-VPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 253 ~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
. .....||+.|+|||++. +.++.++|||||||++|||+|+ .+||.......+...+..+.... . ...+++++.
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~-~--p~~~~~~l~ 232 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-K--PRLASTHVY 232 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC-C--CTTSCHHHH
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC-C--ccccCHHHH
Confidence 2 23457999999999986 5699999999999999999995 66666666667777776653322 2 235789999
Q ss_pred HHHHHhcccCcCCCCChhhhhCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~h 351 (544)
+||.+||+.||++|||++++++|
T Consensus 233 ~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 233 QIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999875
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-52 Score=413.69 Aligned_cols=261 Identities=32% Similarity=0.541 Sum_probs=219.2
Q ss_pred ccceecceecccCCeEEEEEEE---CCCCCeEEEEEEeecccc-ChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTE---NSTGNSYACKSILKRKLV-NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~---~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
++|++++.||+|+||+||+|.+ +.+|+.||||++.+.... .....+.+.+|+.+|+++.+||||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 5599999999999999999987 446899999998654432 223456678999999999867999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 170 VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++++|||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCCEEEeeccchhhhc
Confidence 999999999999999999999999999999999999999999999999999999999994 44679999999998764
Q ss_pred CC--CceecccCCccccCcccccc---cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 250 EG--KVYRDIVGSAYYVAPEVLRR---SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 250 ~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.. .......|++.|+|||.+.+ .++.++|||||||+||+|++|..||.+.........+.........+....++
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s 260 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 260 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC
Confidence 32 22345689999999998853 47889999999999999999999998776555444444433333333334689
Q ss_pred HHHHHHHHHhcccCcCCCC-----ChhhhhCCCccccC
Q 009091 325 DSAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMREG 357 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~ 357 (544)
+++.+||.+||++||.+|| |++|+|+||||+.-
T Consensus 261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 9999999999999999999 48999999999763
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-52 Score=413.13 Aligned_cols=255 Identities=29% Similarity=0.397 Sum_probs=210.5
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe------CC
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED------RQ 168 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------~~ 168 (544)
.|+.+++||+|+||+||+|++..+|+.||||++.+... ...+|+.+|++++ ||||++++++|.. ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcC-CCCCCcEEEEEEecCccCCce
Confidence 49999999999999999999999999999999865431 2247999999997 9999999999853 34
Q ss_pred eEEEEEeccCCCChHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 169 SVHLVMELCSGGELFDK---IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 169 ~~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
++|||||||+++.+..+ ......+++..++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||++
T Consensus 93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~--~~~kl~DFG~a 170 (350)
T d1q5ka_ 93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSA 170 (350)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT--CCEEECCCTTC
T ss_pred EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC--CceeEecccch
Confidence 58999999987543332 23456799999999999999999999999999999999999995432 36999999999
Q ss_pred ccccCCCceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCC-----------
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGG----------- 312 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~----------- 312 (544)
............+||+.|+|||++. ..++.++|||||||++|||++|+.||........+..+.+..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 250 (350)
T d1q5ka_ 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250 (350)
T ss_dssp EECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred hhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence 9887766667789999999999864 458999999999999999999999999888777666554310
Q ss_pred ------ccCCC--------CcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCC
Q 009091 313 ------VDFES--------EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGE 359 (544)
Q Consensus 313 ------~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 359 (544)
..++. .....+++++.+||.+||.+||.+|||+.|+|+||||++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 00000 012246889999999999999999999999999999987543
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-52 Score=402.68 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=210.1
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.+.|++++.||+|+||+||+|.++ ++..||||++... ....+.+.+|+.+|++++ |||||++++++.+ +.++|
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~-~~~~i 84 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG----SMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYI 84 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTT----SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccC----cCCHHHHHHHHHHHHhCC-CCCEeEEEeeecc-CCeEE
Confidence 467999999999999999999976 5778999998542 234567999999999997 9999999998755 56789
Q ss_pred EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||| +.++.+||+|||+|+....
T Consensus 85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIED 161 (272)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEccC
Confidence 99999999999877543 359999999999999999999999999999999999999 5556899999999998765
Q ss_pred CCc--eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCC-CCCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GKV--YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
... .....||+.|+|||++. +.++.++|||||||++|||+||..| |...........+..+.. ... ...++++
T Consensus 162 ~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~-~~~--p~~~~~~ 238 (272)
T d1qpca_ 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR--PDNCPEE 238 (272)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CCC--CTTCCHH
T ss_pred CccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-CCC--cccChHH
Confidence 432 23457899999999886 5689999999999999999996554 555566666666665432 222 2368999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC--CCcccc
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE--HPWMRE 356 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~--hp~f~~ 356 (544)
+.+||.+||+.||++|||++++++ |+||+.
T Consensus 239 l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 999999999999999999999998 888864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-52 Score=395.48 Aligned_cols=245 Identities=22% Similarity=0.359 Sum_probs=213.6
Q ss_pred cceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVM 174 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 174 (544)
.|++++.||+|+||+||+|+++ +++.||||++.+.. ...+.+.+|+.++++++ ||||+++++++.+++.+++||
T Consensus 5 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~----~~~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~~~iv~ 78 (258)
T d1k2pa_ 5 DLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIIT 78 (258)
T ss_dssp CCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSS----SCHHHHHHHHHHHHTCC-CTTBCCEEEEECCSSSEEEEE
T ss_pred HCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCc----CCHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEE
Confidence 4889999999999999999985 67899999986532 34567999999999997 999999999999999999999
Q ss_pred eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCCc
Q 009091 175 ELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253 (544)
Q Consensus 175 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~ 253 (544)
||+++|+|..++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~~ 155 (258)
T d1k2pa_ 79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEY 155 (258)
T ss_dssp ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSSC
T ss_pred EccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCCc
Confidence 99999999998765 4568999999999999999999999999999999999999 4556899999999987654332
Q ss_pred --eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHHH
Q 009091 254 --YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329 (544)
Q Consensus 254 --~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 329 (544)
.....||+.|+|||++. ..++.++|||||||++|||+| |+.||.+.+..++...+..+.. ... +..+++++.+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~-~~~--p~~~~~~l~~ 232 (258)
T d1k2pa_ 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYR--PHLASEKVYT 232 (258)
T ss_dssp CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC-CCC--CTTCCHHHHH
T ss_pred eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCC-CCC--cccccHHHHH
Confidence 22457899999999986 568999999999999999998 8999999998888888776533 222 2467899999
Q ss_pred HHHHhcccCcCCCCChhhhhCC
Q 009091 330 LVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 330 li~~~l~~dp~~Rps~~ell~h 351 (544)
||.+||+.||++|||++++|+|
T Consensus 233 li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 233 IMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHccCCHhHCcCHHHHHHH
Confidence 9999999999999999999986
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=7.8e-52 Score=410.72 Aligned_cols=254 Identities=28% Similarity=0.494 Sum_probs=211.9
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED--RQSV 170 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~ 170 (544)
.++|++++.||+|+||+||+|++..+++.||||++.+ ...+.+.+|+.+|+.+.+||||+++++++.. ...+
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~------~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP------VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH------HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 3579999999999999999999999999999999843 2356788999999999879999999999974 4579
Q ss_pred EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
++|||||.+++|... .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ ..+||+|||+|.....
T Consensus 108 ~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~--~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 108 ALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHP 182 (328)
T ss_dssp EEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCGGGCEECCT
T ss_pred eEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC--CeeeecccccceeccC
Confidence 999999999999765 35699999999999999999999999999999999999996543 3699999999998877
Q ss_pred CCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHh-------------CCcc
Q 009091 251 GKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKG-IFDAILK-------------GGVD 314 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~-~~~~i~~-------------~~~~ 314 (544)
.......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... ....+.. ....
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 262 (328)
T d3bqca1 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262 (328)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence 666677889999999998753 47999999999999999999999997654322 1111110 0000
Q ss_pred --------------------CCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccC
Q 009091 315 --------------------FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357 (544)
Q Consensus 315 --------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 357 (544)
........+++++++||++||.+||.+|||++|+|+||||+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 1111223478999999999999999999999999999999864
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-51 Score=398.36 Aligned_cols=260 Identities=24% Similarity=0.387 Sum_probs=218.3
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
++|++++.||+|+||+||+|++..+++.||||++.... ........+.+|+.+|++++ ||||+++++++......++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-CChHHHHHHHHHHHHHHhcC-cCCEEeeccccccccceeEE
Confidence 46999999999999999999999999999999996544 34455678899999999997 99999999999999999999
Q ss_pred EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCCC-
Q 009091 174 MELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252 (544)
Q Consensus 174 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~- 252 (544)
+|++.|++|..++...+.+++..++.++.|++.||+|||++||+||||||+|||+. .+..+||+|||.+.......
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSCCS
T ss_pred eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc---cCCceeeeecchhhcccCCCc
Confidence 99999999988888888999999999999999999999999999999999999994 44579999999998876533
Q ss_pred ceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHhCCccC--------------
Q 009091 253 VYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDF-------------- 315 (544)
Q Consensus 253 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~-~~~~~~~~i~~~~~~~-------------- 315 (544)
......+++.|+|||++.. .++.++|||||||++|||++|+.||... ...+.+..+.......
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence 3334567889999998753 3789999999999999999999997554 3444444433211100
Q ss_pred -----------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 316 -----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 316 -----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
.......+++.+.+||++||+.||.+||||+|+|+||||++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~ 290 (292)
T d1unla_ 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred cccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence 0011224678999999999999999999999999999998764
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-51 Score=410.41 Aligned_cols=266 Identities=29% Similarity=0.425 Sum_probs=212.3
Q ss_pred cccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 009091 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ-- 168 (544)
Q Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 168 (544)
++..+|++++.||+|+||+||+|+++.+|+.||||++.+.. .....+.+.+|+.+|+.|+ ||||+++++++....
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~ 81 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIE 81 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTT
T ss_pred CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeecccc
Confidence 45678999999999999999999999999999999986432 3455677889999999997 999999999987543
Q ss_pred ---eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 169 ---SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 169 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
.++|+ +++.||+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+|
T Consensus 82 ~~~~~~l~-~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~---~~~~~kl~DfG~a 156 (345)
T d1pmea_ 82 QMKDVYLV-THLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 156 (345)
T ss_dssp TCCCEEEE-EECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred ccceEEEE-EeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC---CCCCEEEcccCce
Confidence 34555 55668999999865 4799999999999999999999999999999999999994 4557999999999
Q ss_pred ccccCCC----ceecccCCccccCccccc--ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCc------
Q 009091 246 VFIDEGK----VYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGV------ 313 (544)
Q Consensus 246 ~~~~~~~----~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~------ 313 (544)
....... .....+||+.|+|||++. ..++.++||||+||++|+|++|+.||.+...............
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
T d1pmea_ 157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236 (345)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhh
Confidence 8764322 234567999999999874 3478999999999999999999999987765544433321100
Q ss_pred -----------------cCCCC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 314 -----------------DFESE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 314 -----------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
..... ....+++++++||.+||+.||.+|||++|+|+||||++...+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~~~ 308 (345)
T d1pmea_ 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 308 (345)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGGSC
T ss_pred hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCccCc
Confidence 00000 1235688999999999999999999999999999999776655443
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-50 Score=392.70 Aligned_cols=248 Identities=22% Similarity=0.356 Sum_probs=199.7
Q ss_pred ccceecceecccCCeEEEEEEECCCC----CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTG----NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
+.|++.++||+|+||+||+|.++.++ ..||||++.... .......+.+|+.+|++++ |||||++++++...+.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCc
Confidence 45899999999999999999987654 369999885432 3444567899999999997 9999999999999999
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
+++|||||.+++|.+.+... ..+++..+..++.||+.||.|||+++|+||||||+|||| +.++.+||+|||+++..
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----
T ss_pred eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhcc
Confidence 99999999999999888765 569999999999999999999999999999999999999 55568999999999876
Q ss_pred cCCC----ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCC-CCCChHHHHHHHHhCCccCCCCcccC
Q 009091 249 DEGK----VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF-WAETEKGIFDAILKGGVDFESEPWLL 322 (544)
Q Consensus 249 ~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~ 322 (544)
.... ......||+.|||||++. +.++.++|||||||++|||++|..|| .......++..+..+ ...+. ...
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~~~--~~~ 237 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLPT--PMD 237 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCCCC--CTT
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhcc-CCCCC--chh
Confidence 5432 122356899999999886 56899999999999999999965554 445555666665554 22222 235
Q ss_pred CCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 323 ISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 323 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+++.+.+||.+||+.||++|||+.+|++
T Consensus 238 ~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 238 CPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 7899999999999999999999999876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-51 Score=410.52 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=201.8
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED----- 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----- 166 (544)
+.++|++++.||+|+||+||+|++..+|+.||||++.+.. ........+.+|+.+++++. ||||++++++|..
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~ 92 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLE 92 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccc
Confidence 4477999999999999999999999999999999996543 34455677899999999997 9999999999963
Q ss_pred -CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCc
Q 009091 167 -RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245 (544)
Q Consensus 167 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a 245 (544)
..++|+|||||.++ +.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||+. .++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~~-l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~---~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC-
T ss_pred cCceeEEEEeccchH-HHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---cccceeeechhhh
Confidence 46899999999765 44444 45699999999999999999999999999999999999994 4457999999999
Q ss_pred ccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhC-------------
Q 009091 246 VFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG------------- 311 (544)
Q Consensus 246 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~------------- 311 (544)
............+||+.|+|||++. ..++.++||||+||++|+|++|+.||.+.+.......+...
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (355)
T d2b1pa1 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence 8877666666778999999999986 46899999999999999999999999887766555444321
Q ss_pred ---------CccCCCCc----------------ccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCC
Q 009091 312 ---------GVDFESEP----------------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358 (544)
Q Consensus 312 ---------~~~~~~~~----------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 358 (544)
........ ....++++++||++||.+||++||||+|+|+||||++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~ 318 (355)
T d2b1pa1 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318 (355)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 11110000 012366889999999999999999999999999999754
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-51 Score=410.06 Aligned_cols=271 Identities=24% Similarity=0.391 Sum_probs=218.3
Q ss_pred CCCcccccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
+.+...+.++|++.+.||+|+||+||+|++..+|+.||||++.+.. ......+.+.+|+.+|+++. |||||++++++.
T Consensus 10 ~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~ 87 (348)
T d2gfsa1 10 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFT 87 (348)
T ss_dssp SSSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEEC
T ss_pred CCccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhcC-CCCeeeEEEEEe
Confidence 3444556788999999999999999999999999999999986543 23445667889999999997 999999999986
Q ss_pred eC-----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 166 DR-----QSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 166 ~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
.. ...+++|+|+.||+|.+++. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|++
T Consensus 88 ~~~~~~~~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~---~~~~~kl~ 163 (348)
T d2gfsa1 88 PARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKIL 163 (348)
T ss_dssp SCSSTTTCCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEEC
T ss_pred eccccccCceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc---cccccccc
Confidence 32 33456667778999999875 45799999999999999999999999999999999999994 45679999
Q ss_pred ecCCcccccCCCceecccCCccccCcccccc--cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHhCCccCC--
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE-- 316 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~~~~~~~~-- 316 (544)
|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+........
T Consensus 164 dfg~a~~~~~--~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~ 241 (348)
T d2gfsa1 164 DFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241 (348)
T ss_dssp CC----CCTG--GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ccchhcccCc--ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 9999976543 3345689999999998653 468999999999999999999999998877666655544221111
Q ss_pred ---------------------CC----cccCCCHHHHHHHHHhcccCcCCCCChhhhhCCCccccCCCCCCCc
Q 009091 317 ---------------------SE----PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364 (544)
Q Consensus 317 ---------------------~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 364 (544)
.. .+..+++++++||.+||..||.+|||++|+|+||||++...+.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~~ 314 (348)
T d2gfsa1 242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP 314 (348)
T ss_dssp HHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSCC
T ss_pred HhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccCC
Confidence 00 1134789999999999999999999999999999999876655544
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-50 Score=390.41 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=206.2
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++++.||+|+||+||+|+++.+ ..||||++... ....+.+.+|+.+|++++ |||||++++++.+ +.+++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~----~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~-~~~~l 88 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPG----TMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 88 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTT----SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcc----cCCHHHHHHHHHHHHhcc-cCCEeEEEEEEec-CCeEE
Confidence 45699999999999999999998754 57999998533 334578999999999997 9999999999854 56789
Q ss_pred EEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIA--QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
|||||++|+|..++.. ...+++..++.++.||+.||+|||++||+||||||+|||| +.++.+||+|||+|+....
T Consensus 89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~~~kl~DfGla~~~~~ 165 (285)
T d1fmka3 89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED 165 (285)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC----
T ss_pred EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCCcEEEcccchhhhccC
Confidence 9999999999988854 3569999999999999999999999999999999999999 4456899999999987654
Q ss_pred CC--ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCC-CCCChHHHHHHHHhCCccCCCCcccCCCHH
Q 009091 251 GK--VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF-WAETEKGIFDAILKGGVDFESEPWLLISDS 326 (544)
Q Consensus 251 ~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (544)
.. ......||+.|+|||++. +.++.++|||||||++|||++|..|| ......+.+..+..+. ..+ ....++++
T Consensus 166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~-~~~--~~~~~~~~ 242 (285)
T d1fmka3 166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMP--CPPECPES 242 (285)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-CCC--CCTTSCHH
T ss_pred CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CCC--CCcccCHH
Confidence 32 223467999999999886 56899999999999999999965555 5555666666666543 222 23468999
Q ss_pred HHHHHHHhcccCcCCCCChhhhhC--CCccccCC
Q 009091 327 AKDLVRKMLIQDPKKRITSAEVLE--HPWMREGG 358 (544)
Q Consensus 327 ~~~li~~~l~~dp~~Rps~~ell~--hp~f~~~~ 358 (544)
+++||.+||+.||++|||+++|++ ++||....
T Consensus 243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276 (285)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred HHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence 999999999999999999999988 89997653
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-50 Score=389.11 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=200.6
Q ss_pred cccceecceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQS 169 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 169 (544)
.++|++++.||+|+||+||+|.+..++ ..||||.+.. .......+.+.+|+.+|++++ ||||+++++++. .+.
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~--~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~~~ 81 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-ENP 81 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTT--TTSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-SSS
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecc--ccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe-cCe
Confidence 467999999999999999999987543 4578887643 234455678999999999997 999999999986 467
Q ss_pred EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccc
Q 009091 170 VHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248 (544)
Q Consensus 170 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~ 248 (544)
++|||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~---~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYM 158 (273)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECC-------
T ss_pred EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCC---CcEEEccchhheec
Confidence 89999999999999987664 569999999999999999999999999999999999999554 47999999999876
Q ss_pred cCCC--ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 249 DEGK--VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 249 ~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.... ......||+.|+|||++. +.++.++|||||||++|||++ |.+||...+..++...+..+... +.+..++
T Consensus 159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~ 235 (273)
T d1mp8a_ 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCP 235 (273)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTCC
T ss_pred cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence 5432 223457899999999986 578999999999999999998 89999988888888888766432 2234689
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++.+||.+||+.||.+|||+.||++|
T Consensus 236 ~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999999999765
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=396.95 Aligned_cols=250 Identities=24% Similarity=0.322 Sum_probs=207.7
Q ss_pred ccceecceecccCCeEEEEEEECCCCCe--EEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNS--YACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+.|++++.||+|+||+||+|.++.++.. ||||++... ......+.+.+|+.+|.++.+|||||++++++.+.+.++
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc--cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 4589999999999999999999888775 566665432 234456679999999999966999999999999999999
Q ss_pred EEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCc
Q 009091 172 LVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~ 235 (544)
|||||++||+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||++ .++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~---~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc---CCC
Confidence 999999999999998654 5689999999999999999999999999999999999994 456
Q ss_pred cEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCC-CCCCCCChHHHHHHHHhCCc
Q 009091 236 MLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGV-PPFWAETEKGIFDAILKGGV 313 (544)
Q Consensus 236 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~-~pf~~~~~~~~~~~i~~~~~ 313 (544)
.+||+|||+++............||..|+|||.+. +.++.++|||||||++|||++|. +||.+.+..++...+..+..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~ 244 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence 79999999998765544444567999999999885 56899999999999999999975 56877777777777766532
Q ss_pred cCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 314 DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+ +.+..+++++++||.+||+.||++|||+.++++|
T Consensus 245 -~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 245 -L--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp -C--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -C--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 2234679999999999999999999999999976
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-50 Score=394.02 Aligned_cols=252 Identities=25% Similarity=0.352 Sum_probs=199.1
Q ss_pred cccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++++.||+|+||+||+|.+.. +++.||||++.... .......+.+|..++.++.+|+||+.+++++...
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 4579999999999999999999754 34689999885432 3344567888999999988899999999988654
Q ss_pred -CeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeec
Q 009091 168 -QSVHLVMELCSGGELFDKIIAQ----------------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230 (544)
Q Consensus 168 -~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~ 230 (544)
+.+++|||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+||||+
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~- 168 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 168 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC-
Confidence 5689999999999999999753 2478999999999999999999999999999999999994
Q ss_pred CCCCccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCC-CCCCCCChHHHH
Q 009091 231 KDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGV-PPFWAETEKGIF 305 (544)
Q Consensus 231 ~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~-~pf~~~~~~~~~ 305 (544)
.++.+||+|||+|+...... ......||+.|+|||++. +.++.++|||||||++|||++|. .||.+......+
T Consensus 169 --~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~ 246 (299)
T d1ywna1 169 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246 (299)
T ss_dssp --GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred --CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 45689999999998764332 223467999999999886 56899999999999999999874 677766555544
Q ss_pred HHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 306 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
..+......+..+ ..+++++++||.+||+.||.+|||++|+++|
T Consensus 247 ~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 247 CRRLKEGTRMRAP--DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCC--ccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4444433333322 3579999999999999999999999999886
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-50 Score=388.19 Aligned_cols=249 Identities=23% Similarity=0.363 Sum_probs=202.3
Q ss_pred ccceecceecccCCeEEEEEEECCC-C--CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENST-G--NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~--~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
+.|++.+.||+|+||+||+|++..+ + ..||||++.+.........+.+.+|+.+|++++ ||||+++++++.+ +.+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEee-cch
Confidence 4599999999999999999986533 3 368999987665555566678999999999997 9999999999976 467
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
++|||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.+ ..+||+|||+++...
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~---~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc---cceeeccchhhhhcc
Confidence 8999999999999887654 569999999999999999999999999999999999999653 479999999999875
Q ss_pred CCCc----eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCC
Q 009091 250 EGKV----YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLI 323 (544)
Q Consensus 250 ~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (544)
.... .....|+..|+|||++. ..++.++|||||||++|||+| |..||.+.+..+....+.+....++.+ ..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~ 240 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP--EDC 240 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCC--TTC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCc--ccc
Confidence 5432 12346788999999886 458899999999999999998 899999999999888888776554433 468
Q ss_pred CHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 324 SDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 324 ~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
++++.+||.+||+.||++|||+.+|+
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~ 266 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALR 266 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 99999999999999999999999986
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-50 Score=393.83 Aligned_cols=247 Identities=22% Similarity=0.301 Sum_probs=202.6
Q ss_pred cceecceecccCCeEEEEEEECCCCC----eEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 009091 95 FYTLGKELGRGQFGITYLCTENSTGN----SYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSV 170 (544)
Q Consensus 95 ~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 170 (544)
.|++++.||+|+||+||+|.+..+|+ .||+|.+... ......+.+.+|+.+|++++ |||||++++++.++ ..
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~-~~ 85 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-TV 85 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-Ce
Confidence 49999999999999999999988877 4677766432 23445678999999999997 99999999999764 56
Q ss_pred EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCccccc
Q 009091 171 HLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249 (544)
Q Consensus 171 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~ 249 (544)
+++|||+.+|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+|+...
T Consensus 86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~---~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---PQHVKITDFGLAKLLG 162 (317)
T ss_dssp EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---TTEEEECCCSHHHHTT
T ss_pred eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCC---CCCeEeeccccceecc
Confidence 7888999999999888764 56999999999999999999999999999999999999954 4579999999998765
Q ss_pred CCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCC
Q 009091 250 EGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 250 ~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
.... .....||+.|+|||++. +.++.++|||||||++|||+| |..||.+.+...+...+..+.. .+.+ ..++
T Consensus 163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~-~~~p--~~~~ 239 (317)
T d1xkka_ 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQP--PICT 239 (317)
T ss_dssp TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCC-CCCC--TTBC
T ss_pred cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CCCC--cccC
Confidence 4322 22346899999999875 568999999999999999998 7899988877777777666532 2222 3579
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++.+||.+||+.||.+|||+.++++|
T Consensus 240 ~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 240 IDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 999999999999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-49 Score=389.07 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=212.2
Q ss_pred ccccccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 009091 90 EDIRQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY 164 (544)
Q Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 164 (544)
+..+++|++.+.||+|+||+||+|+++ .++..||||++.... .....+.+.+|+.+|++++ ||||+++++++
T Consensus 9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~ 85 (301)
T d1lufa_ 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVC 85 (301)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcC-CCCcccceeee
Confidence 334567999999999999999999975 355789999885432 3445678999999999997 99999999999
Q ss_pred EeCCeEEEEEeccCCCChHHHHHHcC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeec
Q 009091 165 EDRQSVHLVMELCSGGELFDKIIAQG------------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRD 220 (544)
Q Consensus 165 ~~~~~~~lv~e~~~~~~L~~~l~~~~------------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrD 220 (544)
...+..++||||+++|+|.+++.... .++...+..++.||+.||+|||+++|||||
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD 165 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 165 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence 99999999999999999999996532 378889999999999999999999999999
Q ss_pred CCCCceeeecCCCCccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCC-CC
Q 009091 221 LKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGV-PP 295 (544)
Q Consensus 221 ikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~-~p 295 (544)
|||+|||+ +.++.+||+|||+|+...... ......||+.|+|||++. ..++.++|||||||++|||++|. .|
T Consensus 166 lKp~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p 242 (301)
T d1lufa_ 166 LATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242 (301)
T ss_dssp CSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred EcccceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence 99999999 455689999999998664322 223467899999999886 56999999999999999999985 67
Q ss_pred CCCCChHHHHHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 296 FWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 296 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
|.+....+....+..+.... ....+++++.+||.+||+.||++|||+.||++
T Consensus 243 ~~~~~~~e~~~~v~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 243 YYGMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp TTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 88888888888887765322 12367999999999999999999999999854
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-49 Score=387.35 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=207.5
Q ss_pred cccceecceecccCCeEEEEEEECCCC-------CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTG-------NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYE 165 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 165 (544)
.++|.+++.||+|+||.||+|++..++ ..||||++.+.. .......+.+|+..+.++.+|||||++++++.
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~ 89 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 89 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence 467999999999999999999976544 369999885432 34456778899999999966999999999999
Q ss_pred eCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 166 DRQSVHLVMELCSGGELFDKIIAQG----------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 166 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
+++.+++|||||++|+|.+++.... .+++..++.++.||+.||+|||+++||||||||+|||+
T Consensus 90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl- 168 (299)
T d1fgka_ 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV- 168 (299)
T ss_dssp SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee-
Confidence 9999999999999999999997543 48999999999999999999999999999999999999
Q ss_pred cCCCCccEEEeecCCcccccCCC---ceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
+.++.+||+|||+++...... ......||+.|+|||++. +.|+.++|||||||++|||++ |..||.+.....+
T Consensus 169 --~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~ 246 (299)
T d1fgka_ 169 --TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246 (299)
T ss_dssp --CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred --cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH
Confidence 445679999999998765432 233467999999999885 679999999999999999998 7888888888777
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+..+ ..++.+ ..+++++.+||.+||+.||++|||+.||++
T Consensus 247 ~~~i~~~-~~~~~p--~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 247 FKLLKEG-HRMDKP--SNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHTT-CCCCCC--SSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcC-CCCCCC--ccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 7766554 333332 368999999999999999999999999975
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-49 Score=380.46 Aligned_cols=242 Identities=22% Similarity=0.335 Sum_probs=198.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-RQSVHL 172 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~l 172 (544)
+.|++++.||+|+||.||+|.++ |..||||++.+. ...+.+.+|+.++++++ ||||+++++++.+ .+.++|
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCEE
T ss_pred HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-----HHHHHHHHHHHHHHhCC-CCCEeeEEEEEEecCCcEEE
Confidence 45899999999999999999985 778999998542 34567899999999997 9999999999854 466899
Q ss_pred EEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccC
Q 009091 173 VMELCSGGELFDKIIAQG--HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~ 250 (544)
||||+++|+|.+++...+ .+++..++.++.||+.||.|||+.+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC------
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecCC
Confidence 999999999999997643 48999999999999999999999999999999999999 4556899999999987654
Q ss_pred CCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHhCCccCCCCcccCCCHHHH
Q 009091 251 GKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328 (544)
Q Consensus 251 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 328 (544)
. .....+|+.|+|||++. +.++.++|||||||++|||+| |+.||.......+...+..+.. .+.+ ..++++++
T Consensus 156 ~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~ 230 (262)
T d1byga_ 156 T--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAP--DGCPPAVY 230 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC-CCCC--TTCCHHHH
T ss_pred C--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CCCC--ccCCHHHH
Confidence 3 23457899999999885 679999999999999999998 7888888888888888765432 2222 35789999
Q ss_pred HHHHHhcccCcCCCCChhhhhCC
Q 009091 329 DLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 329 ~li~~~l~~dp~~Rps~~ell~h 351 (544)
+||.+||+.||.+|||+.+++++
T Consensus 231 ~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 231 EVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcccCHhHCcCHHHHHHH
Confidence 99999999999999999998763
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-49 Score=384.97 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=211.4
Q ss_pred cccceecceecccCCeEEEEEEEC-----CCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 009091 93 RQFYTLGKELGRGQFGITYLCTEN-----STGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDR 167 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 167 (544)
.++|++++.||+|+||.||+|.+. .++..||||++.+.. .......+.+|+.+++++.+|||||++++++...
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~ 99 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence 467999999999999999999863 456789999986433 3455667899999999997799999999999999
Q ss_pred CeEEEEEeccCCCChHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeee
Q 009091 168 QSVHLVMELCSGGELFDKIIAQG------------------HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLS 229 (544)
Q Consensus 168 ~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~ 229 (544)
+.++||||||++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (311)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc
Confidence 99999999999999999997643 488999999999999999999999999999999999994
Q ss_pred cCCCCccEEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCChHHH
Q 009091 230 NKDGGAMLKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGI 304 (544)
Q Consensus 230 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~t-g~~pf~~~~~~~~ 304 (544)
..+.+||+|||+++....... ....+||+.|+|||++. +.++.++|||||||++|||+| |.+||........
T Consensus 180 ---~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~ 256 (311)
T d1t46a_ 180 ---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (311)
T ss_dssp ---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred ---ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence 445899999999987654322 23457899999999886 568999999999999999999 5566666666566
Q ss_pred HHHHHhCCccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
+..+.........+ ..+++++.+||.+||++||.+|||+++|++
T Consensus 257 ~~~~i~~~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 257 FYKMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHHTCCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCCCCCc--ccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 65665554443333 357899999999999999999999999885
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-48 Score=383.59 Aligned_cols=256 Identities=22% Similarity=0.336 Sum_probs=216.4
Q ss_pred ccccceecceecccCCeEEEEEEECC-----CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENS-----TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED 166 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 166 (544)
..++|++++.||+|+||+||+|.++. ++..||||++.+. ........+.+|+.+++++. ||||+++++++..
T Consensus 18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~--~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~ 94 (308)
T d1p4oa_ 18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 94 (308)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGCC-CTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc--cChHHHHHHHHHHHHHHHcC-CCCEeeeeeEEec
Confidence 34779999999999999999998753 3568999988543 24455567899999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCcc
Q 009091 167 RQSVHLVMELCSGGELFDKIIAQ----------GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM 236 (544)
Q Consensus 167 ~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~ 236 (544)
.+..++||||+++|+|.+++... ..++...+..++.|++.||.|||+++|+||||||+|||+ +.+++
T Consensus 95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~~~ 171 (308)
T d1p4oa_ 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFT 171 (308)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCC
T ss_pred CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCCce
Confidence 99999999999999999988643 236889999999999999999999999999999999999 55668
Q ss_pred EEEeecCCcccccCCCc---eecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHhC
Q 009091 237 LKATDFGLSVFIDEGKV---YRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSG-VPPFWAETEKGIFDAILKG 311 (544)
Q Consensus 237 vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg-~~pf~~~~~~~~~~~i~~~ 311 (544)
+||+|||+|+....... .....||+.|+|||.+. +.++.++|||||||++|||+|| ..||.+.+..+.+..+.++
T Consensus 172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~ 251 (308)
T d1p4oa_ 172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 251 (308)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT
T ss_pred EEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Confidence 99999999987654322 23346899999999886 5688899999999999999998 5788888888888888776
Q ss_pred CccCCCCcccCCCHHHHHHHHHhcccCcCCCCChhhhhC------CCcccc
Q 009091 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE------HPWMRE 356 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~------hp~f~~ 356 (544)
.... . ...+++.+.++|.+||+.||.+|||+.+|++ +|+|++
T Consensus 252 ~~~~-~--p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~ 299 (308)
T d1p4oa_ 252 GLLD-K--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299 (308)
T ss_dssp CCCC-C--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred CCCC-C--cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence 5322 2 2367899999999999999999999999987 666654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9e-49 Score=383.38 Aligned_cols=260 Identities=20% Similarity=0.255 Sum_probs=207.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
.++|++++.||+|+||+||+|++..+|+.||||++.... ..+.+.+|+++++.+.+|++|+.+..++...+..++
T Consensus 6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~i 80 (299)
T d1ckia_ 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 80 (299)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-----TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEE
T ss_pred CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-----cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEE
Confidence 457999999999999999999999999999999875432 223577899999999867778888888888999999
Q ss_pred EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
||||+. ++|...+.. .+.+++..+..++.|++.||+|||++||+||||||+|||++..+.+..+||+|||+|+.....
T Consensus 81 vme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~ 159 (299)
T d1ckia_ 81 VMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 159 (299)
T ss_dssp EEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred EEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence 999994 566666554 567999999999999999999999999999999999999976666678999999999976543
Q ss_pred C--------ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChHHHHHHHH---hCCccCCCC-
Q 009091 252 K--------VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL---KGGVDFESE- 318 (544)
Q Consensus 252 ~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~~~~~~i~---~~~~~~~~~- 318 (544)
. .....+||+.|||||++.+ .++.++|||||||++|||++|..||...........+. ......+.+
T Consensus 160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T d1ckia_ 160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239 (299)
T ss_dssp TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHH
T ss_pred ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhH
Confidence 2 1234589999999998864 58999999999999999999999998765543322221 111111111
Q ss_pred cccCCCHHHHHHHHHhcccCcCCCCChhh---hhCCCccccCC
Q 009091 319 PWLLISDSAKDLVRKMLIQDPKKRITSAE---VLEHPWMREGG 358 (544)
Q Consensus 319 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e---ll~hp~f~~~~ 358 (544)
....+|+++.+||..||+.||.+||++++ +|+|+|.+.+.
T Consensus 240 ~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~~ 282 (299)
T d1ckia_ 240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 282 (299)
T ss_dssp HTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred hccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcCC
Confidence 12357899999999999999999999874 57888776543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-48 Score=377.72 Aligned_cols=246 Identities=22% Similarity=0.291 Sum_probs=200.5
Q ss_pred eecceecccCCeEEEEEEECCCC---CeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEE
Q 009091 97 TLGKELGRGQFGITYLCTENSTG---NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYED-RQSVHL 172 (544)
Q Consensus 97 ~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~l 172 (544)
...++||+|+||+||+|.+..++ ..||||++.+ .......+.+.+|+++|++++ ||||+++++++.. ++.+++
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l 106 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLV 106 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECC--CCCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc--ccCHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEE
Confidence 33678999999999999986543 3689998853 234566788999999999997 9999999999865 568999
Q ss_pred EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEeecCCcccccCC
Q 009091 173 VMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251 (544)
Q Consensus 173 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~~~~~~ 251 (544)
|||||++|+|.+++... ..++...+..++.|++.||.|||+.+|+||||||+|||| +..+.+||+|||+++.....
T Consensus 107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDK 183 (311)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTT
T ss_pred EEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhcccc
Confidence 99999999999988754 357788899999999999999999999999999999999 45568999999999876543
Q ss_pred Cce-----ecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHhCCccCCCCcccCCC
Q 009091 252 KVY-----RDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAILKGGVDFESEPWLLIS 324 (544)
Q Consensus 252 ~~~-----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 324 (544)
... ....||+.|+|||.+. +.++.++||||||+++|||+||..||..... ......+..+.. ...+ ..++
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~-~~~p--~~~~ 260 (311)
T d1r0pa_ 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LLQP--EYCP 260 (311)
T ss_dssp TCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCC-CCCC--TTCC
T ss_pred ccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CCCc--ccCc
Confidence 221 2357899999999875 6799999999999999999998888765543 334455555532 2222 3578
Q ss_pred HHHHHHHHHhcccCcCCCCChhhhhCC
Q 009091 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351 (544)
Q Consensus 325 ~~~~~li~~~l~~dp~~Rps~~ell~h 351 (544)
+++.+||.+||..||++||++.|+++|
T Consensus 261 ~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 261 DPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999999999887
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.7e-46 Score=365.30 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=205.1
Q ss_pred ccccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 009091 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171 (544)
Q Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 171 (544)
+..+|++++.||+|+||+||+|++..+++.||||++.... ....+.+|++.++.|.+|+||+.+++++......+
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-----CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 3467999999999999999999999999999999875432 22346789999999987799999999999999999
Q ss_pred EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCC--CCccEEEeecCCcccc
Q 009091 172 LVMELCSGGELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD--GGAMLKATDFGLSVFI 248 (544)
Q Consensus 172 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~--~~~~vkl~Dfg~a~~~ 248 (544)
+||||+ +++|.+++...+ .++...+..++.|++.||+|||++||+||||||+|||++... ..+.+||+|||+|+..
T Consensus 78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 999999 679999887754 699999999999999999999999999999999999996432 2457999999999876
Q ss_pred cCCC--------ceecccCCccccCcccccc-cCCCcchHHHHHHHHHHHhhCCCCCCCCChH---HHHHHHHhCCccCC
Q 009091 249 DEGK--------VYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEK---GIFDAILKGGVDFE 316 (544)
Q Consensus 249 ~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~~l~el~tg~~pf~~~~~~---~~~~~i~~~~~~~~ 316 (544)
.... .....+||+.|||||++.+ .++.++|||||||++|||++|..||.+.... .....+.......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 236 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence 4321 2234689999999998864 5899999999999999999999999765332 23333322211111
Q ss_pred C-CcccCCCHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 317 S-EPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 317 ~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
. .....+|+++.+++..|+..+|.+||+++.+.
T Consensus 237 ~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 1 11135789999999999999999999987653
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-46 Score=367.94 Aligned_cols=245 Identities=22% Similarity=0.283 Sum_probs=189.0
Q ss_pred cccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHH--HHHHHHHhccCCCCeeEEEEEEEeCC--
Q 009091 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSGQQNIVEFRGAYEDRQ-- 168 (544)
Q Consensus 93 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~-- 168 (544)
.+.|.+.+.||+|+||.||+|++ +|+.||||++... ...... .|+..+..++ ||||+++++++...+
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~------~~~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~ 72 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLR-HENILGFIAADNKDNGT 72 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSS
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECcc------chhHHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCc
Confidence 45689999999999999999986 5889999988432 223333 4455555676 999999999997643
Q ss_pred --eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------cCCEeecCCCCceeeecCCCCccEE
Q 009091 169 --SVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF--------MGVMHRDLKPENFLLSNKDGGAMLK 238 (544)
Q Consensus 169 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~--------~~ivHrDikp~Nill~~~~~~~~vk 238 (544)
.+|||||||++|+|.+++.+. .+++..+..++.|++.||+|+|+ +||+||||||+|||| +.++.+|
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~K 148 (303)
T d1vjya_ 73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEE
T ss_pred ceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeE
Confidence 689999999999999999764 68999999999999999999996 599999999999999 4556899
Q ss_pred EeecCCcccccCCC-----ceecccCCccccCccccccc-------CCCcchHHHHHHHHHHHhhCCCCCCCCC------
Q 009091 239 ATDFGLSVFIDEGK-----VYRDIVGSAYYVAPEVLRRS-------YGKEIDVWSAGVILYILLSGVPPFWAET------ 300 (544)
Q Consensus 239 l~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~~l~el~tg~~pf~~~~------ 300 (544)
|+|||++....... .....+||+.|+|||++.+. ++.++|||||||+||||+||..||....
T Consensus 149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~ 228 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence 99999998775432 22346899999999998643 5668999999999999999988774321
Q ss_pred ---------hHHHHHHHHhCCccCCCCccc---CCCHHHHHHHHHhcccCcCCCCChhhhhC
Q 009091 301 ---------EKGIFDAILKGGVDFESEPWL---LISDSAKDLVRKMLIQDPKKRITSAEVLE 350 (544)
Q Consensus 301 ---------~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~ 350 (544)
.......+.........+... .....+.+|+.+||+.||++|||+.||++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 122333333333322221111 12345889999999999999999999865
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.8e-44 Score=358.66 Aligned_cols=259 Identities=24% Similarity=0.425 Sum_probs=195.9
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhcc----------CCCCeeEEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS----------GQQNIVEFRGA 163 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~----------~h~~iv~~~~~ 163 (544)
.+|++++.||+|+||+||+|++..+|+.||||++.+. ....+.+.+|+.+++.+. +|+||++++++
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~----~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc----ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 4699999999999999999999999999999998543 233466788999988875 26889999988
Q ss_pred EEe--CCeEEEEEeccCCCChHHH-HH--HcCCCCHHHHHHHHHHHHHHHHHHHH-cCCEeecCCCCceeeecCCCC---
Q 009091 164 YED--RQSVHLVMELCSGGELFDK-II--AQGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGG--- 234 (544)
Q Consensus 164 ~~~--~~~~~lv~e~~~~~~L~~~-l~--~~~~~~~~~~~~~~~ql~~~l~~lH~-~~ivHrDikp~Nill~~~~~~--- 234 (544)
+.. ....+++|+++..+..... .. ....+++..++.++.||+.||+|||+ .||+||||||+|||++.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence 754 4566777777655443322 22 24568999999999999999999998 899999999999999654321
Q ss_pred ccEEEeecCCcccccCCCceecccCCccccCccccc-ccCCCcchHHHHHHHHHHHhhCCCCCCCCChH------HHHHH
Q 009091 235 AMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK------GIFDA 307 (544)
Q Consensus 235 ~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~~l~el~tg~~pf~~~~~~------~~~~~ 307 (544)
..++|+|||.+...... ....+||+.|+|||++. ..++.++||||+||++++|++|+.||...... .....
T Consensus 169 ~~~kl~dfg~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~ 246 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246 (362)
T ss_dssp EEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred ceeeEeecccccccccc--cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence 35899999999865442 34568999999999875 56899999999999999999999999754321 11111
Q ss_pred HHh--CC--------------------c-----cC-----------CCCcccCCCHHHHHHHHHhcccCcCCCCChhhhh
Q 009091 308 ILK--GG--------------------V-----DF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349 (544)
Q Consensus 308 i~~--~~--------------------~-----~~-----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 349 (544)
... +. . .. ........++++++||.+||.+||.+|||++|+|
T Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L 326 (362)
T d1q8ya_ 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326 (362)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 100 00 0 00 0000112357899999999999999999999999
Q ss_pred CCCccccCC
Q 009091 350 EHPWMREGG 358 (544)
Q Consensus 350 ~hp~f~~~~ 358 (544)
+||||++..
T Consensus 327 ~Hp~f~~~~ 335 (362)
T d1q8ya_ 327 NHPWLKDTL 335 (362)
T ss_dssp TCGGGTTCT
T ss_pred cCcccCCCC
Confidence 999999653
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=6.2e-26 Score=205.12 Aligned_cols=167 Identities=20% Similarity=0.200 Sum_probs=122.9
Q ss_pred ceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccC---------------hhcHHHHHHHHHHHHhccCCCCeeEE
Q 009091 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVN---------------KQDREDIKREIQIMQHLSGQQNIVEF 160 (544)
Q Consensus 96 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------~~~~~~~~~E~~~l~~l~~h~~iv~~ 160 (544)
+.++++||+|+||+||+|.+. +|+.||||++....... ........+|...+.++. |.+++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence 568899999999999999985 68999999875322110 011233457888999997 8899888
Q ss_pred EEEEEeCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCEeecCCCCceeeecCCCCccEEEe
Q 009091 161 RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240 (544)
Q Consensus 161 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ivHrDikp~Nill~~~~~~~~vkl~ 240 (544)
+++. . .+++|||+++..+.. ++...+..++.|++.+|.|||++||+||||||+|||++.. .++|+
T Consensus 80 ~~~~--~--~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~----~~~li 144 (191)
T d1zara2 80 YAWE--G--NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE----GIWII 144 (191)
T ss_dssp EEEE--T--TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT----EEEEC
T ss_pred EEec--C--CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC----CEEEE
Confidence 7653 2 269999998865533 4556677899999999999999999999999999999642 38999
Q ss_pred ecCCcccccCCCceecccCCccccC------cccccccCCCcchHHHHHHHH
Q 009091 241 DFGLSVFIDEGKVYRDIVGSAYYVA------PEVLRRSYGKEIDVWSAGVIL 286 (544)
Q Consensus 241 Dfg~a~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DiwslG~~l 286 (544)
|||+|.....+... .|.. .+.+.+.|+.++|+||+.--+
T Consensus 145 DFG~a~~~~~~~~~-------~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGWR-------EILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTHH-------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCcH-------HHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 99999776533211 1211 123346789999999975443
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.90 E-value=6.6e-24 Score=182.89 Aligned_cols=143 Identities=42% Similarity=0.700 Sum_probs=132.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~ 471 (544)
.++++++++++++|..+|.+++|+|+.+||..++...+..++...+..++..+|.+++|.|+|+||+..+..... ....
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 578999999999999999999999999999999999999999999999999999999999999999988755433 2345
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|+.+|.|+||.|+|+||+++|.+
T Consensus 82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~s 146 (146)
T d1exra_ 82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 146 (146)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcC
Confidence 788999999999999999999999999999988 9999999999999999999999999999874
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.90 E-value=1.9e-23 Score=178.82 Aligned_cols=138 Identities=19% Similarity=0.478 Sum_probs=126.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccchH
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDE 472 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~ 472 (544)
|+++++++++++|..||.+++|.|+..||..+|+.+|..++..++..++. +++|.|+|.+|+..+..... ....+
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~ 76 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE 76 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence 57899999999999999999999999999999999999999999998885 56899999999988765433 34568
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+++.+|.| +|.|+|+||+++|+.+
T Consensus 77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~ 140 (142)
T d1wdcb_ 77 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 140 (142)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred hHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence 89999999999999999999999999999988 999999999999998 6999999999999875
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=3.8e-23 Score=177.99 Aligned_cols=143 Identities=34% Similarity=0.615 Sum_probs=132.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~ 470 (544)
..|+++++++++++|+.||.|++|+|+.+||..++...|..++..++..++..++.++++.++|++|...+..... ...
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999887655333 344
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+|..+| |+||.|+|+||+++|.+
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence 6789999999999999999999999999999998 9999999999999 99999999999999863
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.88 E-value=8.2e-23 Score=177.02 Aligned_cols=143 Identities=24% Similarity=0.410 Sum_probs=126.9
Q ss_pred hhHHHHhhHHHHhcccCC--CCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc--ccc
Q 009091 394 LSEEEIKGLKTMFANMDT--DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY--RLE 469 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~--~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~--~~~ 469 (544)
|+++++++++++|..||. |++|.|+..||..+|+.+|..++..++..+. ..|.+++|.|+|+||+..+.... ...
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~ 79 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence 578899999999999995 8899999999999999999999999998764 46788899999999998775433 234
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCC--CCcceeHHHHHHHHhcCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTD--NDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~~~ 537 (544)
..+.++.+|+.||.+++|+|+.+||+.+|..+|.. ++++++.+++.+|.+ ++|.|+|+||++.|.+++
T Consensus 80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~p 150 (152)
T d1wdcc_ 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 150 (152)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcCC
Confidence 56789999999999999999999999999999999 999999999999865 468999999999998764
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.5e-22 Score=173.10 Aligned_cols=139 Identities=29% Similarity=0.591 Sum_probs=128.5
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccchHH
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDEH 473 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~~ 473 (544)
|+++.++++++|..+|.|++|+|+..||..++...+..++...+..++..+|.+++|.|++.||...+..... ....+.
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 80 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence 4678889999999999999999999999999999999999999999999999999999999999887754332 334577
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
++.+|+.+|.+++|+|+.+||+.++..+|.. +++++..+|+.+|.|+||.|+|+||+++|
T Consensus 81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 8999999999999999999999999999988 99999999999999999999999999986
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.88 E-value=1.5e-22 Score=177.62 Aligned_cols=144 Identities=34% Similarity=0.616 Sum_probs=131.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc----c
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY----R 467 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~----~ 467 (544)
..++++++.+++++|..+|.|++|+|+.+||..++..++..++..++..++..+|.+++|.+++.||+..+.... .
T Consensus 12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~ 91 (162)
T d1topa_ 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAK 91 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcc
Confidence 468899999999999999999999999999999999999999999999999999999999999999987665432 2
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....+.++.+|+.+|.|++|+|+.+||+.+|...|.. ++++++.+|..+|.|+||.|+|+||+++|+.
T Consensus 92 ~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 92 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 2345678889999999999999999999999999888 8999999999999999999999999999875
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.87 E-value=2.9e-22 Score=171.99 Aligned_cols=141 Identities=23% Similarity=0.456 Sum_probs=124.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-ccchH
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-LERDE 472 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~ 472 (544)
|+++++++++++|..+|.+++|+|+.+||..+|+.+|..++..++ +..++.+.+|.|+|.+|+..+..... ....+
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~---~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 77 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEASGPINFTVFLTMFGEKLKGADPED 77 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH---HHHHHHhccCceeechhhhhhhhcccccchHH
Confidence 678999999999999999999999999999999999976555443 34445678899999999988765433 34556
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.++.+|+.+|.+++|+|+.+||+++|+.+|.. ++++++.+++.+|.|+||.|+|.||+++|+++.
T Consensus 78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~~ 143 (145)
T d2mysb_ 78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE 143 (145)
T ss_pred HHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccCC
Confidence 79999999999999999999999999999998 999999999999999999999999999998875
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.87 E-value=3.3e-22 Score=174.11 Aligned_cols=145 Identities=32% Similarity=0.588 Sum_probs=129.4
Q ss_pred HhhhhHHHHhhHHHHhcccCCCC-CCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc----
Q 009091 391 AEALSEEEIKGLKTMFANMDTDK-SGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---- 465 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---- 465 (544)
...++++++++++++|..||.++ +|.|+..||..+|+.+|..++..++..++..++.+++|.+++.+|...+...
T Consensus 5 ~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (156)
T d1dtla_ 5 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 84 (156)
T ss_dssp GGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred HHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccc
Confidence 45789999999999999999995 8999999999999999999999999999999999999999999997654432
Q ss_pred ccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 466 YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 466 ~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
......+.++.+|+.||.|++|+|+.+||+.++..+|.. ++++++.+|+.+|.|+||.|+|+||+++|+.
T Consensus 85 ~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g 155 (156)
T d1dtla_ 85 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 155 (156)
T ss_dssp ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence 223456789999999999999999999999999999988 9999999999999999999999999999864
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.87 E-value=3.8e-22 Score=171.40 Aligned_cols=136 Identities=21% Similarity=0.377 Sum_probs=121.1
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC--CCceeeehhhhhhhhccc---cccchHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVD--GNGTIDYIEFISATMHRY---RLERDEH 473 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~eF~~~~~~~~---~~~~~~~ 473 (544)
.++++++|..||.|++|+|+.+||..+|+.+|..++..++..++..++.+ ++|.|+|.||+..+.... .....+.
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 35789999999999999999999999999999999999999999987665 688999999988775432 2345567
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+++. |.|+||.|+|+||+++|.+
T Consensus 83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 144 (145)
T ss_pred HHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHhc
Confidence 9999999999999999999999999999988 89999999975 8899999999999998864
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.86 E-value=4.6e-22 Score=169.55 Aligned_cols=132 Identities=23% Similarity=0.390 Sum_probs=118.6
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc---ccchHHHHH
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR---LERDEHLYK 476 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~---~~~~~~~~~ 476 (544)
.+++++|..||.|++|.|+.+||..+|+.+|..++..++..+ +.+.+|.|+|++|+..+..... ....+.++.
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 568899999999999999999999999999999999888765 5678999999999988754332 334578999
Q ss_pred HHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+++.+|.+ ||.|+|+||+++|.++
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~sn 140 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILAN 140 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHCC
T ss_pred HHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhcC
Confidence 9999999999999999999999999988 999999999999988 9999999999998764
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.86 E-value=7.3e-23 Score=182.82 Aligned_cols=146 Identities=60% Similarity=0.971 Sum_probs=134.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
..|+++++++++++|..+|.|++|+|+.+||..++..++..++..++..+|..+|.+++|.|+|.+|+..+.........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 46888999999999999999999999999999999999999999999999999999999999999999877665555556
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
+.++.+|+.+|.+++|+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+||+++|++...
T Consensus 82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl-~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~~ 147 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKG 147 (182)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCS
T ss_pred HHHHHHHHHHhhcCCCccchhhhhhhhhhcCc-cHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCcC
Confidence 67899999999999999999999999998875 6678999999999999999999999999997653
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.85 E-value=2.3e-21 Score=164.08 Aligned_cols=129 Identities=26% Similarity=0.443 Sum_probs=115.8
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc---cchHHHHHHH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL---ERDEHLYKAF 478 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~---~~~~~~~~~F 478 (544)
...+|..+|.|++|.|+.+||..++..++...+..++..+|..+|.+++|.|+|+||+..+...... .....++.+|
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F 81 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 3578999999999999999999999999999999999999999999999999999999877653322 2346688999
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
+.+|.|++|+|+.+||+.++..++. +.+.++|..+|.|+||.|+|+||+++|
T Consensus 82 ~~~D~~~~g~i~~~el~~~~~~~~~---~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 82 KLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTTC---HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred cccccccCCcccHHHHHHHHHhcCc---HHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 9999999999999999999987764 578889999999999999999999987
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=2.3e-21 Score=166.58 Aligned_cols=135 Identities=21% Similarity=0.401 Sum_probs=118.0
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHh-cCCCCCceeeehhhhhhhhcc------ccccchHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDA-ADVDGNGTIDYIEFISATMHR------YRLERDEH 473 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~-~D~d~dg~i~~~eF~~~~~~~------~~~~~~~~ 473 (544)
.++++|..||.|++|+|+.+||..+|+.+|..++.+++..++.. .+.+.+|.|+|++|...+... ......+.
T Consensus 3 ~~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1m45a_ 3 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED 82 (146)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence 35778999999999999999999999999999999999999974 556678999999998876432 12234578
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+..+|+.+|.+++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+++|.+
T Consensus 83 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 9999999999999999999999999999988 8999999999999999999999999988764
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.83 E-value=1.3e-20 Score=168.07 Aligned_cols=130 Identities=22% Similarity=0.385 Sum_probs=121.2
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAF 478 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F 478 (544)
.++++++|+.+|.|++|+|+.+||..+|+.++..++..++..++..+|.|++|.|+|++|...+. ....++.+|
T Consensus 17 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~------~~~~~~~~F 90 (182)
T d1y1xa_ 17 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHH------FILSMREGF 90 (182)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccc------cccccccch
Confidence 35799999999999999999999999999999999999999999999999999999999986553 235678899
Q ss_pred hhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 479 QYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 479 ~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
+.+|.+++|+|+.+||+.+|..+|.. ++++++.+++.+|.|+||.|+|+||+.++.
T Consensus 91 ~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~ 147 (182)
T d1y1xa_ 91 RKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI 147 (182)
T ss_dssp HHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred hccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999988 899999999999999999999999999875
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.1e-20 Score=165.82 Aligned_cols=143 Identities=31% Similarity=0.534 Sum_probs=121.1
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-c
Q 009091 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-L 468 (544)
Q Consensus 390 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~ 468 (544)
|.+.|+.+++++++++|..+|.|++|+|+.+||..++..... ..+..+|..+|.+++|.|+|.||+..+..... .
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~ 81 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 81 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTC----TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCC----HHHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence 456799999999999999999999999999999877655432 24678999999999999999999988776443 3
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CCC-----CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GIG-----DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
...+.++.+|+.+|.|++|+|+.+||+.+++.. +.. .++.++.+|..+|.|+||.|+++||+++|.+.
T Consensus 82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred hhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 455779999999999999999999999999764 332 35567789999999999999999999988753
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=4.5e-20 Score=165.75 Aligned_cols=144 Identities=24% Similarity=0.364 Sum_probs=121.3
Q ss_pred hHHHHhhHHHHhcccCCC-CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHH
Q 009091 395 SEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEH 473 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~ 473 (544)
+...+.+|+++|..|+.+ ++|.|+.+||..++...+...+...++.+|+.+|.|++|.|+|.||+..+.........+.
T Consensus 16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~ 95 (189)
T d1jbaa_ 16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK 95 (189)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH
Confidence 344445555556665444 5899999999999999898889999999999999999999999999998877666677888
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcC-----------------CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYG-----------------IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g-----------------~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|+.||.|++|.|+..|+..++..+. .. .++.++.+|..+|.|+||.|+|+||+++|++
T Consensus 96 ~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (189)
T d1jbaa_ 96 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175 (189)
T ss_dssp HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred HHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 99999999999999999999998875431 11 2566789999999999999999999999987
Q ss_pred CCC
Q 009091 536 GTP 538 (544)
Q Consensus 536 ~~~ 538 (544)
.+.
T Consensus 176 ~p~ 178 (189)
T d1jbaa_ 176 DKW 178 (189)
T ss_dssp TTT
T ss_pred CHH
Confidence 764
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=7.3e-21 Score=162.04 Aligned_cols=132 Identities=22% Similarity=0.395 Sum_probs=115.0
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCC--CCCceeeehhhhhhhhcccc---ccchHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV--DGNGTIDYIEFISATMHRYR---LERDEHLY 475 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~--d~dg~i~~~eF~~~~~~~~~---~~~~~~~~ 475 (544)
+++++|..||.+++|.|+.+||..+|+.+|..++..++..++..++. +++|.|+|.+|...+..... ....+.+.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 47889999999999999999999999999999999999999988764 57999999999887654322 23345688
Q ss_pred HHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 476 ~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
.+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.++.. |.|+||.|+|+||+++|
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 99999999999999999999999999988 88999998865 88999999999999876
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=1.1e-19 Score=161.83 Aligned_cols=130 Identities=23% Similarity=0.410 Sum_probs=118.9
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHH
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKA 477 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~ 477 (544)
.++|..+|..+|.|++|+|+.+||..+|+.++.. .+..++..++..+|.|++|.|+|+||+..+.. ...++.+
T Consensus 18 ~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~------~~~~~~~ 91 (181)
T d1hqva_ 18 QSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQNV 91 (181)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh------ccccccc
Confidence 4568999999999999999999999999988755 68899999999999999999999999876643 2467889
Q ss_pred HhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 478 FQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 478 F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
|+.+|.+++|+|+.+||+.++...|.. ++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 92 f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~ 149 (181)
T d1hqva_ 92 FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI 149 (181)
T ss_dssp HHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHH
T ss_pred cccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999999999999999999999988 999999999999999999999999998874
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.79 E-value=2.6e-19 Score=159.83 Aligned_cols=147 Identities=25% Similarity=0.411 Sum_probs=124.1
Q ss_pred HhhhhHHHHhhHHHHhcccCCC--CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-c
Q 009091 391 AEALSEEEIKGLKTMFANMDTD--KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-R 467 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~ 467 (544)
.+.|+.++++.+++.|..+|.+ ++|.|+.+||..++...+...+ ..+..+|+.+|.|++|.|+|.||+..+.... .
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~ 86 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPN 86 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence 4679999999999999999875 6899999999999987776654 4678999999999999999999998876543 3
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CCC-CHH----HHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDY----GIG-DEA----SIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~~-~~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
....+.++.+|+.||.|++|+|+.+|++.++..+ |.. .+. .++.+|..+|.|+||.|+|+||.+++...+.
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 166 (183)
T d2zfda1 87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166 (183)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred CcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCHH
Confidence 4456789999999999999999999999987543 443 433 3566889999999999999999999987654
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=2.9e-19 Score=160.41 Aligned_cols=144 Identities=26% Similarity=0.322 Sum_probs=123.9
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCH-HHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE-TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
.|+..+++++.+.|...+ ++|.|+..||..++..++...+. ..++++|+.+|.|++|.|+|.||+..+.........
T Consensus 21 ~fs~~Ei~~l~~~F~~~~--~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~ 98 (190)
T d1fpwa_ 21 YFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE 98 (190)
T ss_dssp CSTHHHHHHHHHHHHHHC--TTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred CCCHHHHHHHHHHHHHHC--CCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchH
Confidence 589999999988885544 68999999999999998755544 457899999999999999999999988776666778
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCC------------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGI------------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~------------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
+.++.+|+.||.|++|.|+.+||..++..+.. . .++.++.+|..+|.|+||.|+|+||++++++.+.
T Consensus 99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 178 (190)
T d1fpwa_ 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPS 178 (190)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTT
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHH
Confidence 89999999999999999999999999976521 1 2567899999999999999999999999888654
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.78 E-value=2.2e-19 Score=160.02 Aligned_cols=145 Identities=27% Similarity=0.385 Sum_probs=125.4
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS-ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
..|+..+++.+.+.|... +++|.|+..||..++..++.... ...+.++|..+|.+++|.|+|.||+..+........
T Consensus 16 t~fs~~ei~~l~~~F~~~--~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLRD--CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHHH--STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHhh--CCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 468999999998888554 57899999999999998875554 456789999999999999999999998877766677
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC------------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGI------------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~------------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.||.|++|+|+.+|+..++..+.. . .++.++.+|..+|.|+||.|+|+||++++.+.+
T Consensus 94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p 173 (181)
T d1bjfa_ 94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP 173 (181)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence 788999999999999999999999999986421 2 456789999999999999999999999998776
Q ss_pred C
Q 009091 538 P 538 (544)
Q Consensus 538 ~ 538 (544)
.
T Consensus 174 ~ 174 (181)
T d1bjfa_ 174 S 174 (181)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.8e-19 Score=159.32 Aligned_cols=143 Identities=24% Similarity=0.326 Sum_probs=122.4
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCH-HHHHHHHHhcCCCCCceeeehhhhhhhhccccccch
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSE-TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERD 471 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~ 471 (544)
.|+..+++.+.+.|...+ ++|.|+..+|..++..++..... ..+..+|+.+|.+++|.|+|.||+..+.........
T Consensus 18 ~fs~~Ei~~l~~~F~~~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~ 95 (187)
T d1g8ia_ 18 YFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD 95 (187)
T ss_dssp SSCHHHHHHHHHHHHHHC--TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHHHC--CCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence 589999998888886554 78999999999999998776654 446889999999999999999999988776666667
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcC------------CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYG------------IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g------------~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
+.++.+|+.||.|+||+|+.+||..++..+. .. .++.++.+|..+|.|+||.|+|+||++++.+.+
T Consensus 96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p 174 (187)
T d1g8ia_ 96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADP 174 (187)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCH
T ss_pred hhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCH
Confidence 8899999999999999999999999986531 11 346788999999999999999999999988764
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.78 E-value=3e-19 Score=161.98 Aligned_cols=144 Identities=20% Similarity=0.291 Sum_probs=121.3
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS-ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
..|+..+++.+.+.|.. .+++|.|+.+||..++..++.... ...++.+|..+|.|++|.|+|.||+..+........
T Consensus 20 t~f~~~ei~~l~~~F~~--~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFLK--ECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHHH--HCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 45889999999888854 457899999999999999876544 556789999999999999999999988766555566
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC---------------CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG---------------DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~---------------~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.++.+|+.||.|++|+|+.+||..++..+... .++.++.+|..+|.|+||.|+|+||+..+.+
T Consensus 98 ~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 177 (201)
T d1omra_ 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177 (201)
T ss_dssp GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 7789999999999999999999999998765321 2345788999999999999999999998776
Q ss_pred CC
Q 009091 536 GT 537 (544)
Q Consensus 536 ~~ 537 (544)
.+
T Consensus 178 ~~ 179 (201)
T d1omra_ 178 NK 179 (201)
T ss_dssp CH
T ss_pred CH
Confidence 53
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=8e-19 Score=152.67 Aligned_cols=125 Identities=21% Similarity=0.345 Sum_probs=109.9
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCC-----CHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKL-----SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~ 476 (544)
+..+|..+ .+++|.|+.+||+.+|..++... +.+.++.++..+|.|++|.|+|+||+..+. ....++.
T Consensus 2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~------~~~~~~~ 74 (165)
T d1k94a_ 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA------ALNAWKE 74 (165)
T ss_dssp HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHH------HHHHHHH
T ss_pred hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhh------ccchhHH
Confidence 45677777 57899999999999999988654 567899999999999999999999987653 2357889
Q ss_pred HHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.++..+|. ||.|+|+||+.+|..
T Consensus 75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~ 132 (165)
T d1k94a_ 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence 9999999999999999999999999999 89999999999975 689999999887653
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.76 E-value=2.3e-18 Score=152.93 Aligned_cols=144 Identities=22% Similarity=0.355 Sum_probs=120.2
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLS-ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
..|+..+++.+.+.|... +++|.|+.+||..++..++.... ...+..+|+.+|.|++|.|+|+||+..+........
T Consensus 8 t~ft~~ei~~l~~~F~~~--~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 468899999888888654 46799999999999999876654 455699999999999999999999988766555566
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHc----C--------CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDY----G--------IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g--------~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+.++.+|+.||.|++|.|+.+|+..++..+ + .. .++.++.+|+.+|.|+||.|+|+||.+++.+.+
T Consensus 86 ~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~ 165 (178)
T d1s6ca_ 86 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 165 (178)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCC
T ss_pred HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCH
Confidence 7889999999999999999999998877543 1 11 356678899999999999999999999887654
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.75 E-value=2.3e-19 Score=159.78 Aligned_cols=134 Identities=29% Similarity=0.424 Sum_probs=98.2
Q ss_pred hhhHHHHh-hHHHHhcccCCCCCCccCHHHHHHHHHHhCCC--------CCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 393 ALSEEEIK-GLKTMFANMDTDKSGTITYEELKTGLARLGSK--------LSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 393 ~~~~~~~~-~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.++++++. +++++|..+| +++|.|+..||+.+|..++.. ++.+.++.++..+|.|++|.|+|.||...+.
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 90 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 35566654 5889999999 558999999999988765433 4567899999999999999999999987653
Q ss_pred ccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 464 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
....++.+|+.+|+|++|+|+..||+.+|..+|.. +++.++.++. .|.|+||.|+|+||+.+|.
T Consensus 91 ------~~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~-~~~~~dg~i~f~eFi~~~~ 155 (188)
T d1qxpa2 91 ------RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVA-RFADDELIIDFDNFVRCLV 155 (188)
T ss_dssp ------HHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHH-HTSCSSSBCCHHHHHHHHH
T ss_pred ------hhHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHH-HhcCCCCcCCHHHHHHHHH
Confidence 23568899999999999999999999999999988 6655555554 4679999999999998874
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.74 E-value=9.2e-19 Score=156.49 Aligned_cols=133 Identities=25% Similarity=0.391 Sum_probs=113.1
Q ss_pred hHHHHh-hHHHHhcccCCCCCCccCHHHHHHHHHHhCC--------CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc
Q 009091 395 SEEEIK-GLKTMFANMDTDKSGTITYEELKTGLARLGS--------KLSETEVKQLMDAADVDGNGTIDYIEFISATMHR 465 (544)
Q Consensus 395 ~~~~~~-~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 465 (544)
+.+++. .++++|..+| +++|.|+..||..+|..++. ..+.+.+..++..+|.|++|.|+|.||+..+..
T Consensus 12 ~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~- 89 (186)
T d1df0a1 12 NEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK- 89 (186)
T ss_dssp CCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh-
Confidence 344443 4889999998 89999999999999988653 356788999999999999999999999876532
Q ss_pred ccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 466 YRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 466 ~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...++.+|+.+|+|++|+|+.+||+.+|+.+|.. ++ ++.+++..+|.|+||.|+|+||+.+|..
T Consensus 90 -----~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~-~~~~~~~~~d~d~dg~I~f~eFi~~~~~ 154 (186)
T d1df0a1 90 -----IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLVR 154 (186)
T ss_dssp -----HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCH-HHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred -----HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccH-HHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence 3568899999999999999999999999999988 54 4556777899999999999999988754
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.74 E-value=1.7e-18 Score=152.88 Aligned_cols=131 Identities=21% Similarity=0.360 Sum_probs=112.0
Q ss_pred HHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC--------CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc
Q 009091 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK--------LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL 468 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~ 468 (544)
+++++++++|..+| ++||.|+..||+.+|..++.. .+.+.+..++..+|.|++|.|+|+||+..+.
T Consensus 1 ee~~~~r~~F~~~d-~~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~----- 74 (173)
T d1alva_ 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN----- 74 (173)
T ss_dssp CHHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-----
T ss_pred ChHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhh-----
Confidence 36788999999999 558999999999999987533 4678899999999999999999999987653
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
....++.+|+.+|.|++|+|+..||+.+|...|.. +++.++. |..+|.|++|.|+|+||+.+|..
T Consensus 75 -~~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~-~~~~d~d~~G~i~~~EF~~~~~~ 140 (173)
T d1alva_ 75 -NIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSM-IIRRYSDEGGNMDFDNFISCLVR 140 (173)
T ss_dssp -HHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHH-HHHHHTCSSSCBCHHHHHHHHHH
T ss_pred -hhhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHH-hhccccCCCCeEeHHHHHHHHHH
Confidence 23567889999999999999999999999999988 6655554 44666799999999999998853
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.5e-18 Score=151.46 Aligned_cols=142 Identities=19% Similarity=0.302 Sum_probs=111.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCc--------cCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCceeeehhhhhhh
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGT--------ITYEELKTGLARLGSKLSETEVKQLMDAADVD-GNGTIDYIEFISAT 462 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~--------I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~ 462 (544)
+.|+++++.++++.|..++.+++|. ++.++|.... .+..++ -.+++|+.+|.| ++|.|+|+||+..+
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~-~l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l 84 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP-ELKANP---FKERICRVFSTSPAKDSLSFEDFLDLL 84 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSH-HHHTCT---THHHHHHHHCCSTTCCEECHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCc-ccccCh---HHHHHHHhccCCCCCCcCcHHHHHHHH
Confidence 4689999999999999998887765 5666665422 222211 356899999987 69999999999888
Q ss_pred hccc-cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-----CCC-C----HHHHHHHHHHhCCCCCcceeHHHHHH
Q 009091 463 MHRY-RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-----GIG-D----EASIKEIISEVDTDNDGRINYEEFCT 531 (544)
Q Consensus 463 ~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-----g~~-~----~~~~~~~~~~~d~~~dg~i~~~eF~~ 531 (544)
.... ....++.++.+|+.||.|++|+|+.+||+.++..+ +.. + ++.++.+|+.+|.|+||.|+|+||++
T Consensus 85 ~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~ 164 (180)
T d1xo5a_ 85 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 164 (180)
T ss_dssp HHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 6654 34556789999999999999999999999999875 222 2 23466789999999999999999999
Q ss_pred HHhcCC
Q 009091 532 MMRSGT 537 (544)
Q Consensus 532 ~~~~~~ 537 (544)
++.+.+
T Consensus 165 ~~~~~P 170 (180)
T d1xo5a_ 165 VISRSP 170 (180)
T ss_dssp HHHHCH
T ss_pred HHHhCH
Confidence 998764
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.73 E-value=2.8e-18 Score=167.42 Aligned_cols=142 Identities=25% Similarity=0.416 Sum_probs=122.0
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccc----
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRL---- 468 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~---- 468 (544)
.++.++...+.++|..+|.|++|.|+.+||..+|..++..++..++..+|..+|.|++|.|+|.||+..+......
T Consensus 115 ~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F 194 (321)
T d1ij5a_ 115 MLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADF 194 (321)
T ss_dssp CCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHH
Confidence 4677888899999999999999999999999999999999999999999999999999999999997543110000
Q ss_pred -------------------------------------------------------cchHHHHHHHhhhccCCCCcccHHH
Q 009091 469 -------------------------------------------------------ERDEHLYKAFQYFDKDNSGYITRDE 493 (544)
Q Consensus 469 -------------------------------------------------------~~~~~~~~~F~~~D~d~dG~Is~~e 493 (544)
.....+..+|+.+|.|++|+|+.+|
T Consensus 195 ~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~E 274 (321)
T d1ij5a_ 195 RKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEE 274 (321)
T ss_dssp HHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHH
T ss_pred HHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHHH
Confidence 0002234579999999999999999
Q ss_pred HHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 494 LETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 494 l~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
|+.+|..+|.. +++++..+|..+|.|+||.|+|+||+.+|.
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 275 VQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999999974 678899999999999999999999999985
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=7.7e-18 Score=148.40 Aligned_cols=130 Identities=22% Similarity=0.371 Sum_probs=108.6
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-----CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccc
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-----LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER 470 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~ 470 (544)
.++...++..|..++ ++||.|+..||+.+|.++|.. ++.+++..++..+|.|++|.|+|.||+..+..
T Consensus 3 ~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~------ 75 (172)
T d1juoa_ 3 GQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV------ 75 (172)
T ss_dssp TCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH------
T ss_pred cchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHh------
Confidence 344456889999997 789999999999999998865 45788999999999999999999999876532
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
...+..+|+.+|.|++|+|+.+|++.+|..+|.. ++++++.+++.+|. +|.|+|+||+.+|.
T Consensus 76 ~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~ 138 (172)
T d1juoa_ 76 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 138 (172)
T ss_dssp HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHH
T ss_pred hhhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHH
Confidence 3457789999999999999999999999999988 88888888777753 46677777766654
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.72 E-value=1.8e-17 Score=148.63 Aligned_cols=141 Identities=26% Similarity=0.323 Sum_probs=111.3
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHH-----HHhCCCCCHHHHHH-----HHHhcCCCCCceeeehhhhhhhhc
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGL-----ARLGSKLSETEVKQ-----LMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l-----~~~~~~~~~~~~~~-----~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+++++++++.+|..||.|++|+|+.+||..++ +.++...+..++.. .+...+.+.++.|++++|...+..
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence 46788999999999999999999999998754 44566665555433 344556778999999999876643
Q ss_pred ccc-----------ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 009091 465 RYR-----------LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTM 532 (544)
Q Consensus 465 ~~~-----------~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~ 532 (544)
... ......+..+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|+.+|.|+||.|+|+||+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 168 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 111 1123456779999999999999999999999999988 9999999999999999999999999998
Q ss_pred Hhc
Q 009091 533 MRS 535 (544)
Q Consensus 533 ~~~ 535 (544)
+..
T Consensus 169 ~~~ 171 (189)
T d1qv0a_ 169 HLG 171 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.72 E-value=1.1e-17 Score=134.07 Aligned_cols=100 Identities=28% Similarity=0.558 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC-CHH
Q 009091 432 KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG-DEA 507 (544)
Q Consensus 432 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~-~~~ 507 (544)
.++.++|.+++..+| .+|.|+|.||+..+.. .....+.++.+|+.||+|++|+|+.+||+.+|+.+ |.. +++
T Consensus 5 ~l~~~di~~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~ 80 (109)
T d5pala_ 5 VLKADDINKAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDT 80 (109)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred HccHHHHHHHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHH
Confidence 457788999999886 4688999999876542 23456789999999999999999999999999876 555 889
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 508 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+++++|+.+|.|+||.|+|+||+++|.+
T Consensus 81 e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 81 ETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 9999999999999999999999999875
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.71 E-value=1.6e-17 Score=146.73 Aligned_cols=138 Identities=25% Similarity=0.354 Sum_probs=109.1
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC----CCCCHH-H----HHHHHHh--cCCCCCceeeehhhhhhhhc
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG----SKLSET-E----VKQLMDA--ADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~----~~~~~~-~----~~~~~~~--~D~d~dg~i~~~eF~~~~~~ 464 (544)
+-++++++.+|..+|.|++|+|+.+||..++..++ ...... . ...++.. .+.+++|.|+++||+..+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 45678899999999999999999999999987653 111111 1 2223333 36778999999999887754
Q ss_pred cccc-----cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 465 RYRL-----ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 465 ~~~~-----~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
.... .....+..+|+.+|.|+||+|+.+||+.++..+|. +.++++.+|..+|.|+||.|+++||+.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~-~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 155 (174)
T d2scpa_ 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC-CGGGHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred hhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh-hhHHHHHHHhhcCCCCCCcEeHHHHHHHHH
Confidence 3221 12345788999999999999999999999999887 456899999999999999999999988776
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.71 E-value=4.6e-18 Score=151.91 Aligned_cols=140 Identities=14% Similarity=0.288 Sum_probs=113.3
Q ss_pred hhHHHHhhHHHHhcc-cCCCCCCccCHHHHHHHHHHhCC----CCCHH-----------HHHHHHHhcCCCCCceeeehh
Q 009091 394 LSEEEIKGLKTMFAN-MDTDKSGTITYEELKTGLARLGS----KLSET-----------EVKQLMDAADVDGNGTIDYIE 457 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~-~D~~~~G~I~~~e~~~~l~~~~~----~~~~~-----------~~~~~~~~~D~d~dg~i~~~e 457 (544)
||+.+.++++++|.. +|.|++|.|+.+||..++..++. ..... ....++...|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 677888999999997 59999999999999999887531 11111 124566778999999999999
Q ss_pred hhhhhhccc---------cccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHH
Q 009091 458 FISATMHRY---------RLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEE 528 (544)
Q Consensus 458 F~~~~~~~~---------~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~e 528 (544)
|...+.... .......+..+|+.+|.|++|+|+.+||+.+|..+|. ++++++.+|..+|.|+||.|+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l-~~~~~~~~f~~~D~d~dG~i~~~E 160 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC-CCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC-CHHHHHHHHHHcCCCCCCCCcHHH
Confidence 987764321 1122356888999999999999999999999998877 456899999999999999999999
Q ss_pred HHHHHh
Q 009091 529 FCTMMR 534 (544)
Q Consensus 529 F~~~~~ 534 (544)
|+.++.
T Consensus 161 F~~~~~ 166 (185)
T d2sasa_ 161 YKELYY 166 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987664
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.71 E-value=1.5e-17 Score=133.28 Aligned_cols=99 Identities=27% Similarity=0.527 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc---CCC-CHHH
Q 009091 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY---GIG-DEAS 508 (544)
Q Consensus 433 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---g~~-~~~~ 508 (544)
++.++|..++..+| ++|.|+|.||+..+... ....+.++.+|+.||+|++|+|+.+||+.+|+.+ |.. ++++
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~e 81 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE 81 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHH
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHH
Confidence 56788999999875 56889999998776432 3456789999999999999999999999999887 455 8999
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 509 ~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|..+|.|+||.|+|+||+++|.+
T Consensus 82 v~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 82 TKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 999999999999999999999999875
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.70 E-value=5.2e-17 Score=145.26 Aligned_cols=140 Identities=21% Similarity=0.247 Sum_probs=111.9
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHH-----hCCCCCHHHHHHH-----HHhcCCCCCceeeehhhhhhhhc
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-----LGSKLSETEVKQL-----MDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~-----~~~~~~~~~~~~~-----~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
++.++++++++|..+|.|++|+|+.+||..++.. ++..++..++... +.......++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 3567889999999999999999999999877654 4555555543333 33445567788999999766533
Q ss_pred ccc-----------ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 009091 465 RYR-----------LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTM 532 (544)
Q Consensus 465 ~~~-----------~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~ 532 (544)
... ......+..+|+.+|+|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 211 1123457889999999999999999999999999988 8999999999999999999999999987
Q ss_pred Hh
Q 009091 533 MR 534 (544)
Q Consensus 533 ~~ 534 (544)
+.
T Consensus 167 ~~ 168 (187)
T d1uhka1 167 HL 168 (187)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.67 E-value=1.1e-16 Score=141.52 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=111.9
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC----CCCCHHH-----------HHHHHHhcCCCCCceeeehhhhhhh
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLG----SKLSETE-----------VKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~----~~~~~~~-----------~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
..++++++|+.+|.|++|.|+.+||..++..+. ......+ ...++...|.+++|.|++.++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 345688999999999999999999999987753 2333222 2345666789999999999997765
Q ss_pred hccccc--------cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 463 MHRYRL--------ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 463 ~~~~~~--------~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
...... .....++.+|..+|.|++|+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+||+.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~-~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~ 163 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGM-SKAEAAEAFNQVDTNGNGELSLDELLTAVR 163 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHS
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC-cHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 432211 12356788999999999999999999999999876 678999999999999999999999999988
Q ss_pred cC
Q 009091 535 SG 536 (544)
Q Consensus 535 ~~ 536 (544)
.-
T Consensus 164 ~~ 165 (176)
T d1nyaa_ 164 DF 165 (176)
T ss_dssp CC
T ss_pred HH
Confidence 54
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.64 E-value=3.7e-16 Score=124.69 Aligned_cols=100 Identities=26% Similarity=0.466 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC---C-CHH
Q 009091 432 KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI---G-DEA 507 (544)
Q Consensus 432 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~---~-~~~ 507 (544)
.+++.++..++...+. +|.|+|.||+..+.. .....++++.+|+.||+|++|+|+..||+.+|+.++. . +++
T Consensus 4 gls~~di~~~~~~~~~--~gsi~~~eF~~~~~l--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~ 79 (107)
T d2pvba_ 4 GLKDADVAAALAACSA--ADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 79 (107)
T ss_dssp TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCCHHHHHHHHHhccC--CCCcCHHHHHHHHhc--ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHH
Confidence 4688899999998865 467999999876542 3346678999999999999999999999999999853 4 889
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 508 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+++.+|+.+|.|+||.|+|+||+.+|++
T Consensus 80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~a 107 (107)
T d2pvba_ 80 ETKAFLADGDKDGDGMIGVDEFAAMIKA 107 (107)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHcC
Confidence 9999999999999999999999999874
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.62 E-value=1.2e-15 Score=122.34 Aligned_cols=99 Identities=28% Similarity=0.502 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC---C-CHHH
Q 009091 433 LSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI---G-DEAS 508 (544)
Q Consensus 433 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~---~-~~~~ 508 (544)
++.+++..++..++. +|.|+|.||+..+... ....+.++.+|+.||+|++|+|+.+||+.+|+.++. . ++++
T Consensus 6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e 81 (109)
T d1rwya_ 6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKE 81 (109)
T ss_dssp SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred cCHHHHHHHHHhccc--CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHH
Confidence 567889999998754 5789999998876432 345678999999999999999999999999998753 3 7899
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 509 ~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|+.+|.|+||.|+|+||+++|.+
T Consensus 82 ~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 82 TKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 999999999999999999999999876
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.57 E-value=2.8e-15 Score=119.84 Aligned_cols=103 Identities=23% Similarity=0.442 Sum_probs=86.8
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC---CC-
Q 009091 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG---IG- 504 (544)
Q Consensus 429 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g---~~- 504 (544)
++..++.++|..+++..+ .+|.++|.+|+..+.- .....+.++.+|+.||+|++|+|+.+||+.+|..++ ..
T Consensus 2 ~~d~ls~~dI~~~l~~~~--~~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l 77 (108)
T d1rroa_ 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred hhhhCCHHHHHHHHHhcc--cCCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence 345678889999988875 4567999999765532 234567899999999999999999999999998874 34
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 505 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++++.+|..+|.|+||.|+|+||+.+|++
T Consensus 78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~s 108 (108)
T d1rroa_ 78 TESETKSLMDAADNDGDGKIGADEFQEMVHS 108 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence 7899999999999999999999999999864
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.51 E-value=2.4e-14 Score=106.05 Aligned_cols=68 Identities=34% Similarity=0.657 Sum_probs=64.2
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...+++++.+|+.||+|++|+|+..||+.+|+.+|.. ++++++.+|..+|.|+||.|+|+||+++|++
T Consensus 5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 3466789999999999999999999999999999999 9999999999999999999999999999875
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=8.4e-14 Score=120.45 Aligned_cols=122 Identities=20% Similarity=0.265 Sum_probs=103.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
.++.++..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+..||..++...........+..+|+.
T Consensus 41 ~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~ 114 (165)
T d1k94a_ 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 35566777899999999999999887764 678999999999999999999998877665455567789999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHHhc
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTMMRS 535 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~~~~ 535 (544)
+|+ +|.|+.+||..++..+ +.+.+.|+.+|++++|.| +++||++++..
T Consensus 115 ~d~--~g~i~~~eFi~~~~~l-----~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~~ 164 (165)
T d1k94a_ 115 YSK--NGRIFFDDYVACCVKL-----RALTDFFRKRDHLQQGSANFIYDDFLQGTMA 164 (165)
T ss_dssp HCB--TTBCBHHHHHHHHHHH-----HHHHHHHHTTCTTCCSEEEEEHHHHHHHHHT
T ss_pred cCC--CCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHHHc
Confidence 976 5889999999888764 567789999999999987 78999988764
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.49 E-value=1.1e-13 Score=122.26 Aligned_cols=122 Identities=21% Similarity=0.333 Sum_probs=105.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
.+..+|..+|.+++|.|+++||..++..+ .++..+|+.+|.+++|.|+.+||...+.........+.+..+++.
T Consensus 57 ~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~ 130 (181)
T d1hqva_ 57 TVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 130 (181)
T ss_dssp HHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHH
T ss_pred HHHHHhhccccccccchhhhHHHhhhhhc------cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHH
Confidence 35566788999999999999999988764 567889999999999999999998887665555677889999999
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHH
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTMM 533 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~~ 533 (544)
+|.+++|+|+.+||..++..+ +.+..+|+.+|+++||.| +++||+.+|
T Consensus 131 ~d~~~dg~Is~~eF~~~~~~l-----~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 131 FDRQGRGQIAFDDFIQGCIVL-----QRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HCSSCSSCBCHHHHHHHHHHH-----HHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred hCCCCCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 999999999999999888653 467889999999999966 799999876
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.49 E-value=3e-14 Score=107.36 Aligned_cols=68 Identities=37% Similarity=0.689 Sum_probs=64.0
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...+++++.+|+.||+|++|+|+.+||+.+|+.+|.. ++++++.+|..+|.|+||.|+|+||+++|+.
T Consensus 11 ~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 11 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 3456789999999999999999999999999999998 9999999999999999999999999999875
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=2.5e-14 Score=102.90 Aligned_cols=63 Identities=44% Similarity=0.822 Sum_probs=60.1
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
+++++.+|+.||+|++|+|+.+||+.++..+|.. ++.+++.+++.+|.|+||.|+|+||+++|
T Consensus 2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 4679999999999999999999999999999999 99999999999999999999999999875
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.48 E-value=1.8e-13 Score=121.46 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=103.2
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
+.+..++..+|.|++|.|+..||..+...+ ..+..+|+.+|.|++|.|+..|+..++........ .++..+|.
T Consensus 61 ~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~-~~~~~~~~ 133 (186)
T d1df0a1 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIV 133 (186)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECC-HHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhccc-HHHHHHHH
Confidence 346778899999999999999999887754 57889999999999999999999888765433333 34567788
Q ss_pred hhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHH
Q 009091 480 YFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTMM 533 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~~ 533 (544)
.+|.|++|.|+.+||..++..+ +.+..+|+.+|.|++|.| +|+||+.+.
T Consensus 134 ~~d~d~dg~I~f~eFi~~~~~l-----~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 134 ARFADDELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHHCCSTTEECHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHcCCCCeEeHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 8999999999999999988764 588899999999999987 899999875
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.47 E-value=1.9e-14 Score=104.38 Aligned_cols=64 Identities=31% Similarity=0.598 Sum_probs=60.7
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++++.+|+.||+|++|+|+.+||+.+|+.+|.. ++++++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 578999999999999999999999999999874 8999999999999999999999999999876
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.46 E-value=7.1e-14 Score=104.41 Aligned_cols=68 Identities=37% Similarity=0.653 Sum_probs=64.2
Q ss_pred cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.++++++.+|+.||.|++|+|+.+||+.+|..+|.. ++.+++.+|..+|.|+||.|+|+||+++|++.
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~ 74 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT 74 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence 456789999999999999999999999999999998 89999999999999999999999999999875
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.45 E-value=9e-14 Score=100.62 Aligned_cols=62 Identities=24% Similarity=0.496 Sum_probs=59.8
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
++.+|+.+|+|++|+|+..||+.+++.+|.. ++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 6889999999999999999999999999999 9999999999999999999999999999876
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=3.8e-13 Score=117.75 Aligned_cols=123 Identities=23% Similarity=0.282 Sum_probs=104.6
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQ 479 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~ 479 (544)
+.+..++..+|.|++|.|+.+||..++... ..+...|+.+|.|++|.|+.+|+..++.........+.+..+|+
T Consensus 47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~ 120 (172)
T d1juoa_ 47 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 120 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 346667888999999999999999887753 55778999999999999999999887765555556788999999
Q ss_pred hhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHHhc
Q 009091 480 YFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTMMRS 535 (544)
Q Consensus 480 ~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~~~~ 535 (544)
.+|. +|.|+.+||..++..+ +.+..+|+.+|+|+||.| +|+||+.++.+
T Consensus 121 ~~d~--~g~i~~~eF~~~~~~~-----~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l~ 171 (172)
T d1juoa_ 121 RYST--NGKITFDDYIACCVKL-----RALTDSFRRRDTAQQGVVNFPYDDFIQCVMS 171 (172)
T ss_dssp HTCS--SSSEEHHHHHHHHHHH-----HHHHHHHHHTCTTCCSEEEEEHHHHHHHHTT
T ss_pred HHHh--cCCcCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHHHc
Confidence 9975 5789999999998875 478889999999999997 88999998764
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.45 E-value=1.3e-14 Score=110.98 Aligned_cols=84 Identities=35% Similarity=0.466 Sum_probs=70.5
Q ss_pred CCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHH
Q 009091 449 GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527 (544)
Q Consensus 449 ~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~ 527 (544)
.+|.|+..+.. +...........++.+|+.||+|++|+|+..||+.+|+.+|.. ++++++.+|+.+|.|++|.|+|+
T Consensus 2 ~~g~id~~~~~--ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~ 79 (87)
T d1s6ja_ 2 SSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYG 79 (87)
T ss_dssp CSSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHH
T ss_pred CCCccCchHHH--HHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHH
Confidence 57888887753 3233333334468899999999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHh
Q 009091 528 EFCTMMR 534 (544)
Q Consensus 528 eF~~~~~ 534 (544)
||+.+|.
T Consensus 80 EFl~am~ 86 (87)
T d1s6ja_ 80 EFIAATV 86 (87)
T ss_dssp HHTTCCC
T ss_pred HHHHHHc
Confidence 9987664
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.45 E-value=5.5e-13 Score=116.84 Aligned_cols=123 Identities=23% Similarity=0.310 Sum_probs=101.6
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQY 480 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~ 480 (544)
....++..+|.|++|.|+.+||..+...+ ..+..+|+.+|.|++|.|+..||...+.........+ ...+|..
T Consensus 48 ~~~~l~~~~d~d~~g~i~~~ef~~~~~~~------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~-~~~~~~~ 120 (173)
T d1alva_ 48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH-LYSMIIR 120 (173)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHH-HHHHHHH
T ss_pred HHHHHHHHhccCCCCcccchhhhhhhhhh------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHH-HHHHhhc
Confidence 45677889999999999999999887653 4678899999999999999999988776544333344 4556667
Q ss_pred hccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHHhc
Q 009091 481 FDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTMMRS 535 (544)
Q Consensus 481 ~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~~~~ 535 (544)
+|.|++|.|+.+||..++..+ +.+..+|+.+|.|+||.| +|+||+.+...
T Consensus 121 ~d~d~~G~i~~~EF~~~~~~~-----~~~~~~f~~~D~d~~G~it~~~~efl~~~~~ 172 (173)
T d1alva_ 121 RYSDEGGNMDFDNFISCLVRL-----DAMFRAFKSLDKDGTGQIQVNIQEWLQLTMY 172 (173)
T ss_dssp HHTCSSSCBCHHHHHHHHHHH-----HHHHHHHHHHSSSCCSEEEEEHHHHHHHHHC
T ss_pred cccCCCCeEeHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHHHc
Confidence 778999999999999998764 578889999999999988 69999988753
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.42 E-value=1.4e-13 Score=97.45 Aligned_cols=60 Identities=32% Similarity=0.651 Sum_probs=57.4
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHH
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~ 531 (544)
++++.+|+.||++++|+|+.+||+.+|..+|.. ++.+++.+++.+|.|+||.|+|+||++
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 468899999999999999999999999999998 999999999999999999999999974
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.42 E-value=2.1e-13 Score=102.66 Aligned_cols=65 Identities=38% Similarity=0.606 Sum_probs=61.4
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+++.+|+.||+|++|+|+..||+.+|+.+|.. ++.++.+++..+|.|+||.|+|+||+.+|.+
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3568889999999999999999999999999999 9999999999999999999999999999874
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.42 E-value=9.3e-14 Score=103.75 Aligned_cols=73 Identities=41% Similarity=0.621 Sum_probs=69.3
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+.|+++++++++++|..||.|++|+|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+.++..
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999987643
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.41 E-value=1e-12 Score=116.05 Aligned_cols=126 Identities=17% Similarity=0.286 Sum_probs=103.9
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchH
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~ 472 (544)
.++..+ +..+|..+|.|++|.|++.+|...+... ..+...|..+|.+++|.|+.+||...+..........
T Consensus 50 ~~s~~~---~~~l~~~~d~d~~~~i~~~ef~~~~~~~------~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~ 120 (182)
T d1y1xa_ 50 PFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQ 120 (182)
T ss_dssp CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHH
T ss_pred cCchhh---hhhhhccccccccccccccccccccccc------cccccchhccccccchhhhhHHHHHHHHHhCCchhHH
Confidence 455554 4456777899999999999998877653 5678889999999999999999988776554555678
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHH
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTM 532 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~ 532 (544)
.+..+|+.+|.|+||.|+.+||..++..+ ..+.++|+.+|.+++|.| +|+||+..
T Consensus 121 e~~~i~~~~d~~~dg~I~~~eF~~~~~~l-----~~~~~~F~~~D~~~~G~is~~~~~f~~~ 177 (182)
T d1y1xa_ 121 TFQALMRKFDRQRRGSLGFDDYVELSIFV-----CRVRNVFAFYDRERTGQVTFTFDTFIGG 177 (182)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred HHHHHHhhcccCCCCCcCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence 89999999999999999999999988654 367789999999999995 78999864
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.41 E-value=2.8e-13 Score=101.95 Aligned_cols=67 Identities=30% Similarity=0.551 Sum_probs=62.0
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcCC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
..+++.+|+.||+|++|+|+..||+.+|+.+|..+++++..+|..+|.|+||.|+|+||+.+|....
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~ 71 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 71 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHCc
Confidence 3568899999999999999999999999999966899999999999999999999999999988754
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=7.2e-15 Score=128.30 Aligned_cols=127 Identities=10% Similarity=0.147 Sum_probs=89.7
Q ss_pred cCCCCCCccCHHHHHHHHHHhCCCC--CHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCC
Q 009091 409 MDTDKSGTITYEELKTGLARLGSKL--SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNS 486 (544)
Q Consensus 409 ~D~~~~G~I~~~e~~~~l~~~~~~~--~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~d 486 (544)
+|.|++|.|+.+||.+++...+... ..+.+..++...|.+++|.|+|+||..++.... ...++..+|+.||.|++
T Consensus 16 ~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~F~~~d~d~~ 92 (170)
T d2zkmx1 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEIFTSYHAKAK 92 (170)
T ss_dssp HSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTTCC-------
T ss_pred cccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHHHHHHcCCCC
Confidence 7999999999999999886543322 234566678888999999999999998775432 34678899999999999
Q ss_pred CcccHHHHHHHHHHcCCC-----------CHHHHHHHHHHhCCCC----CcceeHHHHHHHHhcCCC
Q 009091 487 GYITRDELETAMKDYGIG-----------DEASIKEIISEVDTDN----DGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 487 G~Is~~el~~~l~~~g~~-----------~~~~~~~~~~~~d~~~----dg~i~~~eF~~~~~~~~~ 538 (544)
|+||.+||+.+|...... +.+.+..++..+..+. +|.|++++|..+|.+...
T Consensus 93 ~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~en 159 (170)
T d2zkmx1 93 PYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPEN 159 (170)
T ss_dssp -CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHSTTS
T ss_pred CcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCccC
Confidence 999999999999875321 4567888999988765 488999999999987643
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.41 E-value=2.5e-13 Score=102.18 Aligned_cols=67 Identities=31% Similarity=0.556 Sum_probs=62.0
Q ss_pred cchHHHHHHHhhhccCC-CCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 469 ERDEHLYKAFQYFDKDN-SGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 469 ~~~~~~~~~F~~~D~d~-dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.....++.+|+.||+|+ +|+|+..||+.+|+.+|.. ++.+++.++..+|.|+||.|+|+||+.+|.+
T Consensus 12 eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 12 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 34467889999999995 8999999999999999998 9999999999999999999999999999875
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.41 E-value=2e-13 Score=102.68 Aligned_cols=77 Identities=30% Similarity=0.507 Sum_probs=71.3
Q ss_pred HHHHhhhhHHHHhhHHHHhcccCCCC-CCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 388 KVIAEALSEEEIKGLKTMFANMDTDK-SGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~F~~~D~~~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+.....++++++++++++|..||.++ +|+|+..||..+|+.+|..++..+++.++..+|.|++|.|+|+||+..+..
T Consensus 3 k~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 34566899999999999999999995 799999999999999999999999999999999999999999999987653
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.40 E-value=1.8e-13 Score=102.97 Aligned_cols=73 Identities=36% Similarity=0.568 Sum_probs=69.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
..|+++++++++++|..||.|++|+|+..||..+|+.+|..++..++..++..+|.|++|.|+|+||+..+..
T Consensus 6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999999999999987653
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.40 E-value=1.8e-13 Score=103.05 Aligned_cols=69 Identities=30% Similarity=0.551 Sum_probs=64.5
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
|++++++++++|..||.|++|+|+..||..+|+.+| .++..++..+|+.+|.|++|.|+|+||+..+..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 578899999999999999999999999999999998 689999999999999999999999999986654
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.40 E-value=3.1e-13 Score=100.81 Aligned_cols=65 Identities=35% Similarity=0.688 Sum_probs=61.4
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+++.+|+.||.|++|+|+.+||+.+|+.+|.. +++++..++..+|.+++|.|+|+||+.+|..
T Consensus 9 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3568899999999999999999999999999998 9999999999999999999999999999864
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.39 E-value=7.3e-13 Score=117.04 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=95.7
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhh
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYF 481 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~ 481 (544)
+..++..+|.|++|.|+..||..++..+ ..+..+|+.+|.|++|.|+..||..++.........+.+..++..+
T Consensus 65 ~~~li~~~D~d~~G~i~~~EF~~l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~ 138 (188)
T d1qxpa2 65 CRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARF 138 (188)
T ss_dssp HHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCcccHHHHHHHHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHh
Confidence 5667888899999999999999887654 5688899999999999999999988776544334455566666664
Q ss_pred ccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHH
Q 009091 482 DKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRI--NYEEFCTMM 533 (544)
Q Consensus 482 D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i--~~~eF~~~~ 533 (544)
.|++|.|+.+||..++..+ ..+..+|+.+|++++|.| +++||+.+.
T Consensus 139 -~~~dg~i~f~eFi~~~~~l-----~~~~~~F~~~D~~~~G~i~l~~~efl~~~ 186 (188)
T d1qxpa2 139 -ADDELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSFS 186 (188)
T ss_dssp -SCSSSBCCHHHHHHHHHHH-----HHHHHHHHHSCSSCCSCEEEEHHHHHHHT
T ss_pred -cCCCCcCCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEEeeHHHHHHHH
Confidence 6999999999999988764 456778999999999976 999998763
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.39 E-value=1.4e-13 Score=101.45 Aligned_cols=70 Identities=41% Similarity=0.683 Sum_probs=67.2
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
|+++++.+++++|..||.|++|+|+..||..++..+|..++.+++..+++.+|.|++|.|+|+||+.++.
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 7889999999999999999999999999999999999999999999999999999999999999987654
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.38 E-value=3.3e-13 Score=99.42 Aligned_cols=64 Identities=44% Similarity=0.739 Sum_probs=60.9
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+++.+|+.||.|++|+|+..||+.+|..+|.. +++++..++..+|.|++|.|+|+||+.+|..
T Consensus 8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 578899999999999999999999999999998 9999999999999999999999999998864
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.36 E-value=5.9e-14 Score=107.16 Aligned_cols=76 Identities=66% Similarity=0.965 Sum_probs=71.2
Q ss_pred HHHHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..++..++++++.+++++|..||.|++|+|+.+||..+++.+|..++..++..+|+.+|.|++|.|+|+||+.++.
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am~ 86 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATV 86 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHc
Confidence 4566788999999999999999999999999999999999999999999999999999999999999999997664
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.30 E-value=1.4e-12 Score=93.50 Aligned_cols=62 Identities=34% Similarity=0.693 Sum_probs=59.2
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~ 461 (544)
++++++|..||.|++|+|+.+||+.++..+|..++..++..+++.+|.|++|.|+|+||+..
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~ 64 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 64 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999865
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.29 E-value=3.6e-12 Score=113.31 Aligned_cols=99 Identities=26% Similarity=0.439 Sum_probs=85.9
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc------------cc
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR------------LE 469 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~------------~~ 469 (544)
+.++|..+|.+++|.|+..||..++..+......+.++.+|+.+|.|++|.|+++||...+..... ..
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~ 144 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT 144 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhh
Confidence 457899999999999999999999999988888999999999999999999999999877633210 11
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
.+..+..+|+.+|.|+||.|+.+||+.++..
T Consensus 145 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (190)
T d1fpwa_ 145 PEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175 (190)
T ss_dssp HHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2366888999999999999999999998875
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.27 E-value=2.1e-12 Score=91.18 Aligned_cols=61 Identities=34% Similarity=0.664 Sum_probs=58.3
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFIS 460 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 460 (544)
++++++|..||.+++|+|+..||+.+|..+|..++..++..+|+.+|.|++|.|+|+||+.
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 3688999999999999999999999999999999999999999999999999999999973
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.26 E-value=3.2e-12 Score=94.41 Aligned_cols=64 Identities=30% Similarity=0.487 Sum_probs=60.5
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
+++.++|..||.|++|+|+..||..+|+.+|..++..++..+++.+|.|++|.|+|+||+..+.
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~ 72 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 72 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4688899999999999999999999999999999999999999999999999999999987664
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.25 E-value=6.7e-12 Score=104.70 Aligned_cols=99 Identities=22% Similarity=0.408 Sum_probs=84.9
Q ss_pred HHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC----CHHHHHHHH
Q 009091 438 VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG----DEASIKEII 513 (544)
Q Consensus 438 ~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~----~~~~~~~~~ 513 (544)
.+.+|+.+|.|+||.|++.||...+.........+.+..+|+.+|.+++|.|+.+||..++...... ....+..+|
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F 81 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 4689999999999999999998887665556677889999999999999999999999988765332 245678899
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.+++|.|+.+||..++...
T Consensus 82 ~~~D~~~~g~i~~~el~~~~~~~ 104 (134)
T d1jfja_ 82 KLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTT
T ss_pred cccccccCCcccHHHHHHHHHhc
Confidence 99999999999999999988753
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=2.2e-12 Score=95.68 Aligned_cols=66 Identities=32% Similarity=0.622 Sum_probs=57.8
Q ss_pred chHHHHHHHhhhccC--CCCcccHHHHHHHHHHcCCC---CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKD--NSGYITRDELETAMKDYGIG---DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d--~dG~Is~~el~~~l~~~g~~---~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..++++.+|+.||.+ ++|+|+.+||+.+|+.+|.. .+.+++.++..+|.|+||.|+|+||+.+|.+
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence 457899999999764 47999999999999998764 3457999999999999999999999999875
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.25 E-value=1.7e-11 Score=97.38 Aligned_cols=101 Identities=24% Similarity=0.286 Sum_probs=78.4
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc---ccc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY---RLE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~---~~~ 469 (544)
.++.+++.++ +..+ +.+|.|++.||..++.. ...+..+++.+|+.+|.|++|.|+.+|+..++.... ...
T Consensus 5 ~l~~eeI~~~---~~~~--d~dG~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~l 77 (109)
T d1pvaa_ 5 LLKADDIKKA---LDAV--KAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL 77 (109)
T ss_dssp HSCHHHHHHH---HHHT--CSTTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred cCCHHHHHHH---HHhc--CCCCCCcHHHHHHHHHH--ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCC
Confidence 3555555444 4434 46789999999876543 234678899999999999999999999977765432 234
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
+.++++.+|+.+|.|+||.|+.+||..+|..
T Consensus 78 s~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 78 TDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 6788999999999999999999999998863
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.24 E-value=4e-12 Score=91.71 Aligned_cols=63 Identities=24% Similarity=0.505 Sum_probs=59.3
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.++++|..||.|++|+|+..||..+++.+|..++.+++..+|+.+|.|++|.|+|+||+..+.
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999987654
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.23 E-value=5.9e-12 Score=113.05 Aligned_cols=121 Identities=21% Similarity=0.261 Sum_probs=100.5
Q ss_pred CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhc-CCCCCceeeehhhhhhhhccccc-cchHHHHHHHhhhccCCCCccc
Q 009091 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAA-DVDGNGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYIT 490 (544)
Q Consensus 413 ~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~Is 490 (544)
..|.|+.+++..+.... .++..++..+++.| +.+++|.|+++||...+...... .....+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~e~l~~l~~~t--~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~ 81 (201)
T d1omra_ 4 KSGALSKEILEELQLNT--KFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81 (201)
T ss_dssp SSCTHHHHHHHHHGGGC--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEE
T ss_pred ccCCCCHHHHHHHHHhC--CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEe
Confidence 46889999987766654 46899999999886 66789999999998887655433 3345567899999999999999
Q ss_pred HHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 491 RDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 491 ~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..||..++..+... .++.++.+|..+|.|++|.|+++||..++..
T Consensus 82 f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~ 127 (201)
T d1omra_ 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127 (201)
T ss_dssp HHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred ehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHH
Confidence 99999988877655 6677999999999999999999999988764
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.23 E-value=4.7e-12 Score=95.04 Aligned_cols=64 Identities=33% Similarity=0.573 Sum_probs=60.4
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++|.++|..||.|++|+|+.+||..+++.+|..++.+++..+|..+|.|+||+|+|+||+.++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 4688899999999999999999999999999999999999999999999999999999987664
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.22 E-value=2.4e-11 Score=96.56 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=78.5
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---cccc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YRLE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~~~ 469 (544)
.++.+++. +++..+| .+|.|++.||...+.. ...+.+++..+|+.+|.|++|.|+.+|+..++... ....
T Consensus 5 ~l~~~di~---~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~ 77 (109)
T d5pala_ 5 VLKADDIN---KAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp TSCHHHHH---HHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred HccHHHHH---HHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcC
Confidence 34555544 4455554 5689999999876532 23467899999999999999999999998766432 2234
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
+.++++.+|+.+|.|+||.|+.+||..+|.+
T Consensus 78 ~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 6778999999999999999999999998864
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.21 E-value=6.4e-12 Score=93.48 Aligned_cols=66 Identities=32% Similarity=0.480 Sum_probs=61.6
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
.++++++|..||.|++|+|+..||..+|..++..++..++..+|+.+|.|++|.|+|+||+..+..
T Consensus 8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 456889999999999999999999999999999999999999999999999999999999887643
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1.5e-11 Score=93.02 Aligned_cols=63 Identities=17% Similarity=0.363 Sum_probs=59.8
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
...+.++|+.+|.+++|+|+.+||+.+|..+|.. ++++++.++..+|.|++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4578899999999999999999999999999998 99999999999999999999999999875
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.19 E-value=3.9e-12 Score=91.86 Aligned_cols=64 Identities=33% Similarity=0.593 Sum_probs=59.0
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
+++.++|..||.+++|+|+.+||..++..+|.. .+..++..+++.+|.|+||.|+|+||+..+.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 358899999999999999999999999999875 7999999999999999999999999987653
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=2.4e-11 Score=107.55 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=83.0
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc------------ccc
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY------------RLE 469 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~------------~~~ 469 (544)
...+|..+|.+++|.|+..||..++..+......+.+..+|+.+|.|++|.|+.+|+...+.... ...
T Consensus 62 ~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~ 141 (187)
T d1g8ia_ 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT 141 (187)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred HHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence 35589999999999999999999999876666677899999999999999999999977653211 112
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
..+.+..+|+.+|.|+||.||.+||++++..
T Consensus 142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~ 172 (187)
T d1g8ia_ 142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172 (187)
T ss_dssp HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 2356788999999999999999999998876
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.14 E-value=1e-10 Score=93.05 Aligned_cols=103 Identities=21% Similarity=0.187 Sum_probs=79.6
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc---c
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY---R 467 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~---~ 467 (544)
+..++.+++.++ +..++ .+|.|++.||..++.... .+..+++.+|+.+|.|++|.|+++||..++.... .
T Consensus 3 ~~~~~~~~i~~~---~~~~~--~~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (109)
T d1rwya_ 3 TDLLSAEDIKKA---IGAFT--AADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75 (109)
T ss_dssp HHHSCHHHHHHH---HHTTC--STTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred hhhcCHHHHHHH---HHhcc--cCCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccc
Confidence 445566665544 44444 458899999987764332 3678899999999999999999999988775432 2
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
.....++..+|+.+|.|+||.|+.+||.++|..
T Consensus 76 ~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 76 DLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 345678999999999999999999999998864
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.13 E-value=6.2e-11 Score=105.07 Aligned_cols=101 Identities=19% Similarity=0.162 Sum_probs=87.1
Q ss_pred CHHHHHHHHHhcCCC-CCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHH
Q 009091 434 SETEVKQLMDAADVD-GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKE 511 (544)
Q Consensus 434 ~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~ 511 (544)
+..+++.+++.|+.+ ++|.|+++||..++...........++.+|+.+|.|+||.|+..||..++..+... .++.++.
T Consensus 19 ~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~ 98 (189)
T d1jbaa_ 19 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW 98 (189)
T ss_dssp HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHH
T ss_pred CHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHH
Confidence 456788899998765 59999999998887554445556788999999999999999999999999887665 7788999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHh
Q 009091 512 IISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 512 ~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
+|+.+|.|++|.|+++||..++.
T Consensus 99 ~F~~~D~d~~g~i~~~E~~~~~~ 121 (189)
T d1jbaa_ 99 TFKIYDKDRNGCIDRQELLDIVE 121 (189)
T ss_dssp HHHHHCSSCSSCBCHHHHHHHHH
T ss_pred HHhhhccCCCCcccHhHHHHHHH
Confidence 99999999999999999988765
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.12 E-value=7.6e-11 Score=99.73 Aligned_cols=101 Identities=24% Similarity=0.234 Sum_probs=86.3
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIIS 514 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~~ 514 (544)
+++.+|..+|.|++|.|++.||..++...........+..+|+.+|.+++|.|+.+||..++...... ..+.+..+|.
T Consensus 10 ~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~ 89 (146)
T d1exra_ 10 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK 89 (146)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHH
Confidence 46778999999999999999998887665556677889999999999999999999999988554322 4567889999
Q ss_pred HhCCCCCcceeHHHHHHHHhcCC
Q 009091 515 EVDTDNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 515 ~~d~~~dg~i~~~eF~~~~~~~~ 537 (544)
.+|.|++|.|+.+||..++....
T Consensus 90 ~~D~d~~G~i~~~e~~~~l~~~~ 112 (146)
T d1exra_ 90 VFDRDGNGLISAAELRHVMTNLG 112 (146)
T ss_dssp HHSTTCSSCBCHHHHHHHHHHTT
T ss_pred HhCCCCCCcCCHHHHHHHHHHHh
Confidence 99999999999999999997543
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.11 E-value=1.6e-10 Score=91.64 Aligned_cols=102 Identities=22% Similarity=0.213 Sum_probs=78.2
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcc---cc
Q 009091 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR---YR 467 (544)
Q Consensus 391 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---~~ 467 (544)
+..++.+++..+.+.. +.+|.+++.+|...+.- ...+.++++.+|+.+|.|++|+|+++||..++... ..
T Consensus 3 ~d~ls~~dI~~~l~~~-----~~~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (108)
T d1rroa_ 3 TDILSAEDIAAALQEC-----QDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GGTSCHHHHHHHHHHT-----CSTTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred hhhCCHHHHHHHHHhc-----ccCCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccC
Confidence 3456677766653333 46678999999654432 23467889999999999999999999998877542 12
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHH
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
..+.+.++.+|+.+|.|+||.|+.+||..+|+
T Consensus 76 ~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 76 ELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 34568899999999999999999999999875
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.09 E-value=3.2e-11 Score=89.44 Aligned_cols=66 Identities=17% Similarity=0.485 Sum_probs=56.7
Q ss_pred chHHHHHHHhhhcc-C-CCCcccHHHHHHHHHHc--CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDK-D-NSGYITRDELETAMKDY--GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~-d-~dG~Is~~el~~~l~~~--g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+.++.+|+.||. + +.|+|+.+||+.+|+.+ +.. ++++++.++..+|.|+||.|+|+||+.+|.+
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 45789999999975 3 45899999999999987 333 5667999999999999999999999998864
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=7.8e-11 Score=91.13 Aligned_cols=62 Identities=21% Similarity=0.356 Sum_probs=56.4
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
...++.+|+.+|+|++|+|+.+|++.++...|. ++++++.++..+|.|+||.|+++||+.+|
T Consensus 9 ~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~am 70 (95)
T d1c07a_ 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCC-CHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 456788999999999999999999999998876 67899999999999999999999998655
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=99.07 E-value=1.2e-10 Score=89.62 Aligned_cols=65 Identities=22% Similarity=0.460 Sum_probs=56.6
Q ss_pred hHHHHHHHhhh-ccCCC-CcccHHHHHHHHHHcCC-----C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYF-DKDNS-GYITRDELETAMKDYGI-----G-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~-D~d~d-G~Is~~el~~~l~~~g~-----~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.+..+|..| |+||+ |+|+.+||+.+|...+. . ++++++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 8 i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 35788899988 88875 99999999999988642 2 7889999999999999999999999988753
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=99.07 E-value=1.8e-10 Score=88.32 Aligned_cols=65 Identities=20% Similarity=0.554 Sum_probs=55.3
Q ss_pred hHHHHHHHhhh-ccCCCC-cccHHHHHHHHHHc-----CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYF-DKDNSG-YITRDELETAMKDY-----GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~-D~d~dG-~Is~~el~~~l~~~-----g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.+..+|..| |.||+| +|+.+||+.+|+.. +.. ++++++++|+.+|.|+||.|+|+||+.+|.+
T Consensus 8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence 35788899998 667655 79999999999873 334 8899999999999999999999999998764
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.07 E-value=3.7e-10 Score=89.24 Aligned_cols=100 Identities=21% Similarity=0.199 Sum_probs=77.8
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc---ccc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRY---RLE 469 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~---~~~ 469 (544)
.+++.++..+ +...+ .+|.|++.||...+.-. ..+.++++.+|+.+|.|++|.|+..||...+.... ...
T Consensus 4 gls~~di~~~---~~~~~--~~gsi~~~eF~~~~~l~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~ 76 (107)
T d2pvba_ 4 GLKDADVAAA---LAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARAL 76 (107)
T ss_dssp TSCHHHHHHH---HHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCC
T ss_pred CCCHHHHHHH---HHhcc--CCCCcCHHHHHHHHhcc--cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccC
Confidence 3556665544 44444 45679999998766532 23678899999999999999999999988765432 234
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
+.+.++.+|+.+|.|+||.|+.+||..+|+
T Consensus 77 ~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 77 TDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 678899999999999999999999998876
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.07 E-value=4.8e-10 Score=98.45 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=98.7
Q ss_pred ccCHHHHHHHHHHhCCCCCHHHHHHHHHhcC-CCCCceeeehhhhhhhhccccccch-HHHHHHHhhhccCCCCcccHHH
Q 009091 416 TITYEELKTGLARLGSKLSETEVKQLMDAAD-VDGNGTIDYIEFISATMHRYRLERD-EHLYKAFQYFDKDNSGYITRDE 493 (544)
Q Consensus 416 ~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D-~d~dg~i~~~eF~~~~~~~~~~~~~-~~~~~~F~~~D~d~dG~Is~~e 493 (544)
+++.+++..+..... ++.++++.+++.|. .+++|.|+..||...+......... ..+..+|+.+|++++|.|+.+|
T Consensus 3 ~l~~~~~~~L~~~t~--fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~e 80 (181)
T d1bjfa_ 3 KLRPEVMQDLLESTD--FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFRE 80 (181)
T ss_dssp CCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHH
T ss_pred CCCHHHHHHHHHhcC--CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHH
Confidence 678888888777754 48899999998864 4789999999999887665443333 4567899999999999999999
Q ss_pred HHHHHHHcCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 494 LETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 494 l~~~l~~~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
|..++..+-.. .++.+..+|..+|.|+||.|+++||..++..
T Consensus 81 Fl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~ 123 (181)
T d1bjfa_ 81 FIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 123 (181)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHH
Confidence 99998887655 5678899999999999999999999999875
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.06 E-value=2e-10 Score=101.18 Aligned_cols=99 Identities=17% Similarity=0.275 Sum_probs=80.4
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc----cc----cchH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRY----RL----ERDE 472 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~----~~----~~~~ 472 (544)
...+|..+|.|++|.|+..||..++..+... .....+..+|+.+|.|++|.|+.+|+...+.... .. ...+
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 4578999999999999999999998876544 3456699999999999999999999987653211 11 1123
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
.+..+|+.+|.|+||+|+.+||+.++..
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~ 163 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLR 163 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4677999999999999999999998875
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=6.4e-11 Score=92.62 Aligned_cols=63 Identities=21% Similarity=0.251 Sum_probs=53.5
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHHHcCC----------------C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 474 LYKAFQYFDKDNSGYITRDELETAMKDYGI----------------G-DEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 474 ~~~~F~~~D~d~dG~Is~~el~~~l~~~g~----------------~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
++.+|+.||.||||+|+.+||+.++..++. . .+..++.+|..+|.|+||.||++||++++++.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~ 97 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 97 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence 688999999999999999999999976421 0 23457789999999999999999999998764
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=8.6e-11 Score=90.90 Aligned_cols=67 Identities=21% Similarity=0.288 Sum_probs=61.9
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
+++++.+++.++|..+|.|++|+|+.+|+..++...+ ++.+++..+|+.+|.|+||.|+++||+.++
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am 70 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 6788899999999999999999999999999998875 588999999999999999999999997654
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=99.05 E-value=9.9e-11 Score=90.70 Aligned_cols=64 Identities=16% Similarity=0.359 Sum_probs=54.7
Q ss_pred HHHHHHHhhh-ccCCC-CcccHHHHHHHHHHcCCC---CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYF-DKDNS-GYITRDELETAMKDYGIG---DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~-D~d~d-G~Is~~el~~~l~~~g~~---~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+..+|..| |.||+ |+||..||+.+|+..+.. +++.+++++..+|.|+||.|+|+||+.+|.+
T Consensus 14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 5677889887 77875 999999999999886432 5667999999999999999999999988853
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=2.2e-10 Score=100.34 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=79.9
Q ss_pred HHHHhcccCCC-CCCccCHHHHHHHHHHhCCC-CCHHHHHHHHHhcCCCCCceeeehhhhhhhhccc-----c----ccc
Q 009091 402 LKTMFANMDTD-KSGTITYEELKTGLARLGSK-LSETEVKQLMDAADVDGNGTIDYIEFISATMHRY-----R----LER 470 (544)
Q Consensus 402 l~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-----~----~~~ 470 (544)
..++|..||.+ ++|.|+.+||..++..+... ..++.++.+|+.+|.|++|.|+.+|+...+.... . ...
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 45688899987 68999999999999887544 4466799999999999999999999987654321 1 111
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHH
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKD 500 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~ 500 (544)
.+.+..+|+.+|.|+||.||.+||++++..
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~ 168 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISR 168 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 234667999999999999999999999876
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.7e-10 Score=87.04 Aligned_cols=64 Identities=27% Similarity=0.429 Sum_probs=60.2
Q ss_pred HhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 399 IKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 399 ~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
...+.++|..+|.+++|+|+.+||..+|..++..+++.++..+|..+|.|++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 3568899999999999999999999999999999999999999999999999999999998653
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.03 E-value=6.3e-10 Score=93.90 Aligned_cols=105 Identities=21% Similarity=0.212 Sum_probs=89.5
Q ss_pred CCCHHH---HHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CH
Q 009091 432 KLSETE---VKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DE 506 (544)
Q Consensus 432 ~~~~~~---~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~ 506 (544)
++++++ ++.+|+.+|.|++|.|+++||..++...........+...+..++.+++|.++.+++...+...... ..
T Consensus 3 ~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1lkja_ 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE 82 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHH
Confidence 345554 5577999999999999999999887766566677888999999999999999999999988776654 46
Q ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 507 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+..+|+.+|.|++|.|+.+||..++...
T Consensus 83 ~~~~~aF~~~D~d~~G~I~~~el~~~l~~~ 112 (146)
T d1lkja_ 83 QELLEAFKVFDKNGDGLISAAELKHVLTSI 112 (146)
T ss_dssp HHHHHHHHHHCSSSSCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 789999999999999999999999988643
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03 E-value=1.7e-10 Score=88.71 Aligned_cols=67 Identities=21% Similarity=0.309 Sum_probs=62.1
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
+++++++.+.++|..+|.|++|+|+.+|+..++...+ ++..++..+|+.+|.|++|.|+|+||+.++
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~ 69 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAF 69 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHH
Confidence 6788999999999999999999999999999999976 588999999999999999999999997544
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.03 E-value=2.6e-10 Score=96.24 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=84.5
Q ss_pred CHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccC--CCCcccHHHHHHHHHHcCC----CCHH
Q 009091 434 SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKD--NSGYITRDELETAMKDYGI----GDEA 507 (544)
Q Consensus 434 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d--~dG~Is~~el~~~l~~~g~----~~~~ 507 (544)
+.++++.+|..+|.|++|.|+..||..++.......+..++..++..+|.+ ++|.|+.+||..++..... ...+
T Consensus 2 ~~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (145)
T d2mysc_ 2 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFE 81 (145)
T ss_pred CHHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHH
Confidence 457899999999999999999999988775444445667788888877655 6899999999998865421 2566
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 508 SIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 508 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
++..+|+.+|.+++|.|+.+||.++|...
T Consensus 82 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~ 110 (145)
T d2mysc_ 82 DFVEGLRVFDKEGNGTVMGAELRHVLATL 110 (145)
T ss_pred HHHHHHHHhhcCCCCEEcHHHHHHHHHHh
Confidence 78899999999999999999999998753
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=99.03 E-value=7.9e-11 Score=90.11 Aligned_cols=64 Identities=23% Similarity=0.527 Sum_probs=55.0
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcC-----CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG-----IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g-----~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
.+.+..+|+.||.| +|+|+.+||+.+|.... .. ++..++.++..+|.|+||.|+|+||+.+|..
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence 45788899999987 89999999999997642 22 5678999999999999999999999988753
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03 E-value=3e-10 Score=87.19 Aligned_cols=63 Identities=19% Similarity=0.374 Sum_probs=56.6
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
...++.+|+.+|+|++|+|+.+|++.+|...|. +.+++..++..+|.|+||.|+|+||+.+|+
T Consensus 8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~ 70 (92)
T d1fi6a_ 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhHHHHHHHHHHccC-CHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 356788999999999999999999999999887 678999999999999999999999975443
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=99.03 E-value=2.2e-10 Score=87.48 Aligned_cols=65 Identities=15% Similarity=0.283 Sum_probs=56.0
Q ss_pred hHHHHHHHhhh-ccCCCC-cccHHHHHHHHHHcC-----CC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 471 DEHLYKAFQYF-DKDNSG-YITRDELETAMKDYG-----IG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 471 ~~~~~~~F~~~-D~d~dG-~Is~~el~~~l~~~g-----~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
...+..+|..| |+|||| +|+.+||+.+|+... .. ++.+++.+++.+|.|+||.|+|+||+.+|..
T Consensus 8 i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 8 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 35677899988 999999 599999999998742 23 6889999999999999999999999988753
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=3.1e-10 Score=95.18 Aligned_cols=101 Identities=23% Similarity=0.310 Sum_probs=87.5
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC--CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~--~~~~~~~~~ 513 (544)
++++.+|..+|.|++|.|++.||...+...........+...|..+|.+++|.|+..||...+...... ..+++..+|
T Consensus 6 ~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~~f 85 (141)
T d2obha1 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (141)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHHHH
Confidence 478999999999999999999998877665556677889999999999999999999999888654322 456788999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
..+|.+++|.|+.++|..++...
T Consensus 86 ~~~d~~~~G~i~~~el~~~l~~~ 108 (141)
T d2obha1 86 KLFDDDETGKISFKNLKRVAKEL 108 (141)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHT
T ss_pred HHhcccCCCCccHHHHHHHHHHh
Confidence 99999999999999999998865
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.01 E-value=3e-10 Score=99.49 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=85.3
Q ss_pred CCCHHHHHHHHHhc-CCCCCceeeehhhhhhhhccccc-cchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHH
Q 009091 432 KLSETEVKQLMDAA-DVDGNGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508 (544)
Q Consensus 432 ~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~ 508 (544)
.++..|++.+++.| +.+++|.|+.+||...+...... .....+..+|+.+|.|++|.|+.+||..++..+... .++.
T Consensus 9 ~ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~ 88 (178)
T d1s6ca_ 9 NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK 88 (178)
T ss_dssp SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHH
Confidence 46889999999887 66789999999998877654333 234456889999999999999999999888765444 5778
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 509 IKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 509 ~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
+..+|+.+|.|++|.|+++||..++.
T Consensus 89 ~~~~f~~~D~~~~g~i~~~e~~~~~~ 114 (178)
T d1s6ca_ 89 LRWTFNLYDINKDGYINKEEMMDIVK 114 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHhhccCCCCeecHHHHHHHHH
Confidence 89999999999999999999987654
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=3.6e-10 Score=97.66 Aligned_cols=101 Identities=20% Similarity=0.295 Sum_probs=82.7
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCC-CHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc-----ccchHHHH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKL-SETEVKQLMDAADVDGNGTIDYIEFISATMHRYR-----LERDEHLY 475 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~-~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-----~~~~~~~~ 475 (544)
+.++|..+|.+++|.|+++||..++....... ....+..+|+.+|.|++|.|+.+|+...+..... ......+.
T Consensus 50 ~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~ 129 (165)
T d1auib_ 50 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 129 (165)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHH
Confidence 34578899999999999999999998876554 4456899999999999999999999887643211 12345577
Q ss_pred HHHhhhccCCCCcccHHHHHHHHHHcC
Q 009091 476 KAFQYFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 476 ~~F~~~D~d~dG~Is~~el~~~l~~~g 502 (544)
.+|..+|.|+||+|+.+||.++|..+.
T Consensus 130 ~~~~~~D~~~dG~Is~~EF~~i~~~~~ 156 (165)
T d1auib_ 130 KTIINADKDGDGRISFEEFCAVVGGLD 156 (165)
T ss_dssp HHHHHHCTTSSSSEEHHHHHHHHGGGC
T ss_pred HHHHHcCCCCCCcEeHHHHHHHHhcCC
Confidence 899999999999999999999998654
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.98 E-value=2.4e-10 Score=86.47 Aligned_cols=64 Identities=19% Similarity=0.508 Sum_probs=55.9
Q ss_pred HHHHHHHhhh-ccCCCC-cccHHHHHHHHHH---cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYF-DKDNSG-YITRDELETAMKD---YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~-D~d~dG-~Is~~el~~~l~~---~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+..+|..| |+|||| +|+..||+.++.. .+.. ++++++.+++++|.|+||.|+|+||+.+|.+
T Consensus 9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 5677899888 999999 6999999999987 4444 6788999999999999999999999988763
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.95 E-value=1.5e-09 Score=91.11 Aligned_cols=97 Identities=16% Similarity=0.239 Sum_probs=80.3
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CCC-CHHHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GIG-DEASIKEII 513 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~~-~~~~~~~~~ 513 (544)
++++.+|..+|.|++|.|++.||..++..........++..+++ +++|.|+.+||..++... ... .++++..+|
T Consensus 7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF 82 (142)
T d1wdcb_ 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 82 (142)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhhhHHHhh
Confidence 35778899999999999999999887765544556677777664 678999999999988654 333 688999999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+.+|.|++|.|+.+||..+|...
T Consensus 83 ~~~D~d~~G~I~~~el~~~l~~~ 105 (142)
T d1wdcb_ 83 AMFDEQETKKLNIEYIKDLLENM 105 (142)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHHS
T ss_pred hhhcccCCCcccHHHHHHHHHHc
Confidence 99999999999999999988753
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.93 E-value=2.9e-10 Score=85.74 Aligned_cols=64 Identities=16% Similarity=0.284 Sum_probs=54.7
Q ss_pred HHHHHHHhhh-ccCCCCcc-cHHHHHHHHHH-cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYF-DKDNSGYI-TRDELETAMKD-YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~-D~d~dG~I-s~~el~~~l~~-~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+.+..+|..| |+||+|.+ +.+||+.+|.. +|.. ++.+++++++++|.|+||.|+|+||+.+|.+
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4677788888 99999965 99999999975 5644 5678999999999999999999999998864
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.93 E-value=1.8e-09 Score=92.13 Aligned_cols=99 Identities=27% Similarity=0.349 Sum_probs=81.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHh----CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHH
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARL----GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYK 476 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~ 476 (544)
++..++..++.+++|.++.+++...+... ......+++..+|+.+|.|++|.|+.+||...+.......+.+++..
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~ 131 (156)
T d1dtla_ 52 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 131 (156)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHH
T ss_pred HHHHHHHHhhccCCCccchhhhhhhhhhcccccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHH
Confidence 35566778899999999999988766643 22345677899999999999999999999888766556667889999
Q ss_pred HHhhhccCCCCcccHHHHHHHHH
Q 009091 477 AFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
+|+.+|.|+||+|+.+||.++|+
T Consensus 132 i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 132 LMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp HHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHhCCCCCCeEeHHHHHHHHc
Confidence 99999999999999999999986
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.91 E-value=1.9e-09 Score=92.57 Aligned_cols=100 Identities=27% Similarity=0.331 Sum_probs=83.5
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHc----CCC-CHHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDY----GIG-DEASIKE 511 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----g~~-~~~~~~~ 511 (544)
+++.+|..+|.|++|.|++.||...+...........+..+|..+|.+++|.|+..|+...+... ... ..+.+..
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 100 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAN 100 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCcHHHHHH
Confidence 46789999999999999999998877666666778899999999999999999999986655321 111 3456788
Q ss_pred HHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 512 IISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 512 ~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
+|+.+|.|++|.|+.+||..++...
T Consensus 101 aF~~~D~d~~G~Is~~e~~~~l~~~ 125 (162)
T d1topa_ 101 CFRIFDKNADGFIDIEELGEILRAT 125 (162)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHTT
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHhh
Confidence 9999999999999999999998754
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.91 E-value=3.1e-10 Score=83.79 Aligned_cols=64 Identities=23% Similarity=0.467 Sum_probs=54.3
Q ss_pred hhHHHHhcccCCC--CCCccCHHHHHHHHHHhCCCCC--HHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 400 KGLKTMFANMDTD--KSGTITYEELKTGLARLGSKLS--ETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 400 ~~l~~~F~~~D~~--~~G~I~~~e~~~~l~~~~~~~~--~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++++++|+.||.+ ++|+|+.+||..+|+.+|..++ ..++..+++.+|.|+||.|+|+||+..+.
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~ 72 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK 72 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHH
Confidence 4578889988654 4699999999999999987765 34799999999999999999999987654
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.88 E-value=2.9e-09 Score=79.73 Aligned_cols=64 Identities=20% Similarity=0.398 Sum_probs=53.4
Q ss_pred HHHHHHHhhh-ccCCCC-cccHHHHHHHHHHc-----CCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYF-DKDNSG-YITRDELETAMKDY-----GIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~-D~d~dG-~Is~~el~~~l~~~-----g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+..+|..| +++|++ +|+.+||+.+|+.. +.. +++.++++++.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 5677899888 556654 69999999999873 223 6789999999999999999999999988753
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=2.7e-09 Score=82.11 Aligned_cols=62 Identities=16% Similarity=0.337 Sum_probs=54.9
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
...++.+|+.+| +++|+|+.+|++.+|...|. +.+++..++..+|.|+||.|+++||+.+|+
T Consensus 9 ~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl-~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 9 KAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp HHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSC-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 356788999999 89999999999999998887 567899999999999999999999965443
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.86 E-value=9.5e-10 Score=96.51 Aligned_cols=99 Identities=22% Similarity=0.246 Sum_probs=85.9
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISE 515 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~ 515 (544)
+++.+|+.+|.|++|.|+++||..++...........+..+|+.+|.+++|.|+..++..+....... ..+.+..+|..
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l~~aF~~ 90 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSY 90 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHHHHHHHH
Confidence 47889999999999999999998888765556677889999999999999999999998876654433 55678899999
Q ss_pred hCCCCCcceeHHHHHHHHhc
Q 009091 516 VDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 516 ~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|.+++|.|+.++|.++++.
T Consensus 91 ~D~d~~G~i~~~el~~~l~~ 110 (182)
T d1s6ia_ 91 FDKDGSGYITLDEIQQACKD 110 (182)
T ss_dssp TTTTCSSEEEHHHHHHTTTT
T ss_pred HhhcCCCccchhhhhhhhhh
Confidence 99999999999999988764
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.86 E-value=1.4e-09 Score=84.42 Aligned_cols=61 Identities=21% Similarity=0.351 Sum_probs=56.2
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+.+|+.+|+|++|+|+.+|++.++...|. +++++..++..+|.|+||.|+++||+.+|+
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L-~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCC-cHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 4568999999999999999999999998877 678999999999999999999999987775
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=1.2e-09 Score=84.18 Aligned_cols=66 Identities=20% Similarity=0.328 Sum_probs=60.2
Q ss_pred hhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 394 ~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
+++++..++.++|..+| +++|+|+.+|+..++...| ++.+++..+|+.+|.|++|.|+++||+.++
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~ 69 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAM 69 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHH
Confidence 67889999999999999 8999999999999998866 578899999999999999999999997544
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.85 E-value=2e-09 Score=82.67 Aligned_cols=68 Identities=21% Similarity=0.333 Sum_probs=57.9
Q ss_pred HHHhhHHHHhccc-CCCCC-CccCHHHHHHHHHHhC-----CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 397 EEIKGLKTMFANM-DTDKS-GTITYEELKTGLARLG-----SKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 397 ~~~~~l~~~F~~~-D~~~~-G~I~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+.++.+.++|..+ |.+++ |+|+.+||+.+|..++ ...+..++..+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 3457788999888 78875 9999999999999875 3457889999999999999999999999877643
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.84 E-value=5.7e-10 Score=85.20 Aligned_cols=67 Identities=18% Similarity=0.316 Sum_probs=56.1
Q ss_pred HHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh-----CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARL-----GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 397 ~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+.++.+..+|..+|.+ +|+|+.+||..+|... +...+...++.+|+.+|.|+||+|+|+||..++..
T Consensus 6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence 4567899999999977 8999999999999874 33446677999999999999999999999876643
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=1.1e-09 Score=86.65 Aligned_cols=63 Identities=21% Similarity=0.362 Sum_probs=56.1
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
....+..+|+.+|+|++|+|+.+|++.+|...|.. .+++..++..+|.|+||.|+++||+.+|
T Consensus 20 e~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~-~~~L~~Iw~l~D~d~dG~l~~~EF~~am 82 (110)
T d1iq3a_ 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLS-IPELSYIWELSDADCDGALTLPEFCAAF 82 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCS-SCCHHHHHHHHCSSSCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccc-hHHHHHHHHHhccCCCCeECHHHHHHHH
Confidence 45678899999999999999999999999887764 4579999999999999999999998555
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.81 E-value=1.1e-08 Score=86.76 Aligned_cols=107 Identities=13% Similarity=0.143 Sum_probs=85.2
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhC--CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhcccc
Q 009091 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLG--SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYR 467 (544)
Q Consensus 390 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~--~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 467 (544)
++...+..++.. +...|.+++|.|+++||..++..+. ...+..++...|+.+|.+++|.|+..||..++.....
T Consensus 38 lG~~~t~~e~~~----~~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~ 113 (152)
T d1wdcc_ 38 LGINPRNEDVFA----VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE 113 (152)
T ss_dssp TTCCCCHHHHHH----TTCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS
T ss_pred hccCccHhhhhh----hhhhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCC
Confidence 344455555443 2456888999999999999887753 3456788999999999999999999999888876655
Q ss_pred ccchHHHHHHHhhhcc--CCCCcccHHHHHHHHHH
Q 009091 468 LERDEHLYKAFQYFDK--DNSGYITRDELETAMKD 500 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~--d~dG~Is~~el~~~l~~ 500 (544)
..+.+++..+|+.+|. |++|.|+.+||.+.|..
T Consensus 114 ~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~ 148 (152)
T d1wdcc_ 114 RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148 (152)
T ss_dssp CCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence 6678889999999986 45689999999988764
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.79 E-value=1.4e-09 Score=64.01 Aligned_cols=32 Identities=44% Similarity=0.829 Sum_probs=29.6
Q ss_pred hHHHHHHHhhhccCCCCcccHHHHHHHHHHcC
Q 009091 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 471 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g 502 (544)
+++++++|+.||+||||+|+.+||+.+|+.+|
T Consensus 2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 56899999999999999999999999998776
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.78 E-value=2.2e-09 Score=82.93 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=57.1
Q ss_pred HHHhhHHHHhccc-CCCCC-CccCHHHHHHHHHHhCCC--CCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 397 EEIKGLKTMFANM-DTDKS-GTITYEELKTGLARLGSK--LSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 397 ~~~~~l~~~F~~~-D~~~~-G~I~~~e~~~~l~~~~~~--~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+.++.+.++|..| |.+++ |+|+..||+.+++..+.. .+..++..+++.+|.|+||.|+|+||+..+..
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4467888999888 77775 999999999999987543 45667999999999999999999999887654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.78 E-value=1.7e-09 Score=84.06 Aligned_cols=63 Identities=17% Similarity=0.344 Sum_probs=51.2
Q ss_pred HHHHHHHhhhccCCCCcccHHHHHHHHHHcCC--------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHhc
Q 009091 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYGI--------GDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 472 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~--------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
..+..+|..|| +++|+|+..||+.+|+..+. .++..++.+|..+|.|+||.|+|+||+.+|..
T Consensus 10 ~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 10 IGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 34556677776 78999999999999987542 13456899999999999999999999988753
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.78 E-value=5.4e-09 Score=87.29 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=78.0
Q ss_pred HHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCC---C-CHHHHHH
Q 009091 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGI---G-DEASIKE 511 (544)
Q Consensus 436 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~---~-~~~~~~~ 511 (544)
.+.+.+|..+|.|++|.|++.||..++.......+...+. .+|.+++|.|+.+||..++..... . ..+++..
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~----~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHH----HHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhh----hhhccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 4567899999999999999999987775544444555544 457889999999999998864321 2 5678999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHhc
Q 009091 512 IISEVDTDNDGRINYEEFCTMMRS 535 (544)
Q Consensus 512 ~~~~~d~~~dg~i~~~eF~~~~~~ 535 (544)
+|+.+|.+++|.|+.+||..+|..
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~ 104 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTS 104 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHH
T ss_pred HHHHHhccCCCcchHHHHHHHHHH
Confidence 999999999999999999999874
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.77 E-value=6.1e-09 Score=79.52 Aligned_cols=66 Identities=21% Similarity=0.356 Sum_probs=56.2
Q ss_pred HHhhHHHHhccc-CCCCC-CccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 398 EIKGLKTMFANM-DTDKS-GTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 398 ~~~~l~~~F~~~-D~~~~-G~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.++.+.++|..+ |.+++ |+|+.+||+.+|+. ++...+.+++..+|+.+|.|+||.|+|+||+..+.
T Consensus 7 ~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~ 79 (93)
T d3c1va1 7 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 79 (93)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Confidence 456788999998 66665 47999999999987 45667899999999999999999999999987664
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.77 E-value=1e-08 Score=86.28 Aligned_cols=107 Identities=9% Similarity=0.118 Sum_probs=74.9
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh------CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL------GSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 390 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
++..++.++++.+.. ...+.+.+|.|+.+||...+... ......+++...|+.+|.+++|.|+..||..++.
T Consensus 31 lg~~~s~~ei~~l~~--~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~ 108 (146)
T d1m45a_ 31 IGYNPTNQLVQDIIN--ADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLT 108 (146)
T ss_dssp TTCCCCHHHHHHHHH--C--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHH
T ss_pred cCCchhHHHHhhhhc--cccccccccccccchhhhhhhhhcccccccccchHHHHHHHHHhhccccccccchhhhhhhhc
Confidence 344556666544421 34455677889988888876542 2234556788889999999999999999888876
Q ss_pred ccccccchHHHHHHHhhhccCCCCcccHHHHHHHH
Q 009091 464 HRYRLERDEHLYKAFQYFDKDNSGYITRDELETAM 498 (544)
Q Consensus 464 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l 498 (544)
......+.+++..+|..+|.|+||.|+.+||.+.+
T Consensus 109 ~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i 143 (146)
T d1m45a_ 109 GLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDV 143 (146)
T ss_dssp HSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHH
T ss_pred ccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHH
Confidence 55445567788888999999999999999986655
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.76 E-value=5.9e-10 Score=82.43 Aligned_cols=66 Identities=20% Similarity=0.328 Sum_probs=54.6
Q ss_pred HHhhHHHHhcccCC-C-CCCccCHHHHHHHHHHh--CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 398 EIKGLKTMFANMDT-D-KSGTITYEELKTGLARL--GSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 398 ~~~~l~~~F~~~D~-~-~~G~I~~~e~~~~l~~~--~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..+++..+|..||. + +.|+|+.+||+.+++.+ +...+..++..++..+|.|+||.|+|+||+.++.
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~ 74 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 45678899999975 3 45899999999999997 4445666789999999999999999999987664
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=3.8e-09 Score=88.09 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=81.7
Q ss_pred HHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhcc--CCCCcccHHHHHHHHHHcCCC----CHHHHH
Q 009091 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDK--DNSGYITRDELETAMKDYGIG----DEASIK 510 (544)
Q Consensus 437 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~--d~dG~Is~~el~~~l~~~g~~----~~~~~~ 510 (544)
|++.+|..+|.|++|.|+..|+..++.......+..++..++..++. +++|.|+..+|..++...... ..+++.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 46789999999999999999998877655556677888888887764 689999999999988765332 345678
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 511 EIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 511 ~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.+|+.+|.+++|.|+.+||.++|...
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~~ 106 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTTL 106 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHHS
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHHh
Confidence 89999999999999999999999764
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.75 E-value=4.3e-09 Score=80.12 Aligned_cols=68 Identities=15% Similarity=0.306 Sum_probs=57.4
Q ss_pred HHHhhHHHHhccc-CCCCCC-ccCHHHHHHHHHHhC-----CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 397 EEIKGLKTMFANM-DTDKSG-TITYEELKTGLARLG-----SKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 397 ~~~~~l~~~F~~~-D~~~~G-~I~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
+.++.+..+|..+ |.+++| +|+.+||+.+|+... ...+..++..+++.+|.|+||.|+|+||+..+..
T Consensus 6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 4556788899887 999998 599999999999853 3457889999999999999999999999876643
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.75 E-value=1.3e-08 Score=89.67 Aligned_cols=66 Identities=26% Similarity=0.280 Sum_probs=56.2
Q ss_pred HHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 398 EIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 398 ~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
....+..+|..+|.|++|+|+.+||..++..+|..++.+++..+|+.+|.|+||.|+|+||+..+.
T Consensus 105 ~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~ 170 (189)
T d1qv0a_ 105 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170 (189)
T ss_dssp HHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 334577899999999999999999999999999999999999999999999999999999986553
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.73 E-value=1.3e-08 Score=89.46 Aligned_cols=69 Identities=22% Similarity=0.277 Sum_probs=61.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.......+..+|..+|.|++|+|+.+||+.++..++..++.+++..+|+.+|.|+||.|+|+||+..+.
T Consensus 100 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~ 168 (187)
T d1uhka1 100 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168 (187)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 334445678899999999999999999999999999999999999999999999999999999986543
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=1e-09 Score=86.94 Aligned_cols=68 Identities=24% Similarity=0.294 Sum_probs=58.8
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
.+++++++.+.++|..+|+|++|+|+.+|+..++.+.+ ++..++..+|+.+|.|++|.|+++||+.++
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am 82 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAF 82 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHH
Confidence 36778888899999999999999999999999887755 566789999999999999999999997644
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.69 E-value=4.7e-09 Score=79.16 Aligned_cols=67 Identities=24% Similarity=0.449 Sum_probs=57.7
Q ss_pred HHHhhHHHHhccc-CCCCCC-ccCHHHHHHHHHH---hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 397 EEIKGLKTMFANM-DTDKSG-TITYEELKTGLAR---LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 397 ~~~~~l~~~F~~~-D~~~~G-~I~~~e~~~~l~~---~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..+..+..+|..+ |++++| +|+..||+.++.. ++...++.++..+++.+|.|+||+|+|+||+..+.
T Consensus 6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~ 77 (89)
T d1k8ua_ 6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLG 77 (89)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 3456788899888 999998 6999999999998 45666788899999999999999999999987664
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.69 E-value=8.2e-09 Score=90.54 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=79.1
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhC---------CCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchH
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLG---------SKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDE 472 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~---------~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~ 472 (544)
...++...|.+++|.|+.+++...+.... .......+..+|+.+|.|++|.|+.+||..++... ....+
T Consensus 62 ~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~--~l~~~ 139 (185)
T d2sasa_ 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF--QLQCA 139 (185)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS--CCCCS
T ss_pred HHHHHHHhCcCCCCcEeeeHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHc--CCCHH
Confidence 34567778999999999999998887632 11223458899999999999999999998877543 23456
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHHc
Q 009091 473 HLYKAFQYFDKDNSGYITRDELETAMKDY 501 (544)
Q Consensus 473 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~ 501 (544)
+++.+|+.+|.|+||.|+.+||..++..+
T Consensus 140 ~~~~~f~~~D~d~dG~i~~~EF~~~~~~f 168 (185)
T d2sasa_ 140 DVPAVYNVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp SHHHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence 78999999999999999999999888653
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.68 E-value=7e-09 Score=87.14 Aligned_cols=88 Identities=16% Similarity=0.164 Sum_probs=43.2
Q ss_pred CCCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCccc
Q 009091 412 DKSGTITYEELKTGLARL-GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYIT 490 (544)
Q Consensus 412 ~~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is 490 (544)
+++|.|++.+|..++... ......+++...|+.+|.+++|.|+..||...+.......+.+++..+|+.+|.|++|.|+
T Consensus 52 ~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~ 131 (145)
T d2mysb_ 52 EASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVD 131 (145)
T ss_pred hccCceeechhhhhhhhcccccchHHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEe
Confidence 444555555555544332 2222334455555555555555555555555443333333444455555555555555555
Q ss_pred HHHHHHHHH
Q 009091 491 RDELETAMK 499 (544)
Q Consensus 491 ~~el~~~l~ 499 (544)
..||.++|.
T Consensus 132 y~eF~~~l~ 140 (145)
T d2mysb_ 132 YKNICYVIT 140 (145)
T ss_pred HHHHHHHhc
Confidence 555555443
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=1.1e-08 Score=79.46 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=50.2
Q ss_pred HHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhh
Q 009091 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYF 481 (544)
Q Consensus 402 l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~ 481 (544)
++.+|..+|.|++|+|+.+||..++..++... .+ ...+. ... ..........+..+|+.+
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~-----------~~-~~~~~---~~~-----~~~~~~~~~~v~~~~~~~ 77 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKV-----------YD-PKNEE---DDM-----REMEEERLRMREHVMKNV 77 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTT-----------SC-CSSCS---SHH-----HHTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhc-----------ch-hhhhh---hhh-----hhhHHHHHHHHHHHHHHc
Confidence 67789999999999999999999887642111 00 00000 000 001111234567788888
Q ss_pred ccCCCCcccHHHHHHHHHH
Q 009091 482 DKDNSGYITRDELETAMKD 500 (544)
Q Consensus 482 D~d~dG~Is~~el~~~l~~ 500 (544)
|+|+||.||.+||..+++.
T Consensus 78 D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 78 DTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp CSSCSSEEEHHHHHHHHHC
T ss_pred CCCCCCcCcHHHHHHHHhc
Confidence 8888888888888877654
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.61 E-value=4.1e-08 Score=73.33 Aligned_cols=67 Identities=21% Similarity=0.377 Sum_probs=55.0
Q ss_pred HHHhhHHHHhccc-CCCCC-CccCHHHHHHHHHHh-----CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 397 EEIKGLKTMFANM-DTDKS-GTITYEELKTGLARL-----GSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 397 ~~~~~l~~~F~~~-D~~~~-G~I~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..+..+..+|..+ +.+++ ++|+.+||+.+++.. +...+...+..+++.+|.|+||.|+|+||+..+.
T Consensus 5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~ 78 (87)
T d1e8aa_ 5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVA 78 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence 4566788999988 44555 469999999999983 3445678899999999999999999999987664
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.59 E-value=7e-09 Score=77.97 Aligned_cols=67 Identities=10% Similarity=0.253 Sum_probs=56.0
Q ss_pred HHHhhHHHHhccc-CCCCCCc-cCHHHHHHHHHH-hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 397 EEIKGLKTMFANM-DTDKSGT-ITYEELKTGLAR-LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 397 ~~~~~l~~~F~~~-D~~~~G~-I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..++.+..+|..+ |.+++|. ++.+||+.++.. ++...+..+++.+++.+|.|+||+|+|+||+..+.
T Consensus 7 ~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~ 76 (87)
T d1xk4a1 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVI 76 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4456788888888 8889886 599999999986 66666667799999999999999999999987664
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.58 E-value=1.1e-07 Score=82.21 Aligned_cols=99 Identities=21% Similarity=0.255 Sum_probs=80.1
Q ss_pred HHHhcccCCCCCCccCHHHHHHHHHHhCCCCC--------HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHH
Q 009091 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLS--------ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHL 474 (544)
Q Consensus 403 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~--------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~ 474 (544)
..++...|.+++|.|+..++...+........ ...+..+|..+|.|++|.|+.+||..++... .....++
T Consensus 61 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~--~~~~~~~ 138 (176)
T d1nyaa_ 61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL--GMSKAEA 138 (176)
T ss_dssp HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT--TCCHHHH
T ss_pred HHHHHHhcCCCCCcccHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc--CCcHHHH
Confidence 34567788899999999999888777543332 2346789999999999999999998766432 3466789
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHHcCC
Q 009091 475 YKAFQYFDKDNSGYITRDELETAMKDYGI 503 (544)
Q Consensus 475 ~~~F~~~D~d~dG~Is~~el~~~l~~~g~ 503 (544)
+.+|+.+|.|+||+|+.+||..+++.+..
T Consensus 139 ~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~ 167 (176)
T d1nyaa_ 139 AEAFNQVDTNGNGELSLDELLTAVRDFHF 167 (176)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHSCCSS
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHHHHhc
Confidence 99999999999999999999999887654
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.58 E-value=6.2e-08 Score=83.83 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=73.0
Q ss_pred cCCCCCCccCHHHHHHHHHHhCCCCC-----HHHHHHHHHhcCCCCCceeeehhhhhhhhccccccchHHHHHHHhhhcc
Q 009091 409 MDTDKSGTITYEELKTGLARLGSKLS-----ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDK 483 (544)
Q Consensus 409 ~D~~~~G~I~~~e~~~~l~~~~~~~~-----~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~ 483 (544)
.|.+++|.|+.+||...+........ ...+..+|+.+|.|++|.|+.+||..++... .....++..+|+.+|.
T Consensus 62 ~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~--~~~~~~~~~~f~~~D~ 139 (174)
T d2scpa_ 62 TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDT 139 (174)
T ss_dssp GGTTTTSCEEHHHHHHHHHHHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT--TCCGGGHHHHHHHHCT
T ss_pred cccCCCCcCcHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHH--hhhhHHHHHHHhhcCC
Confidence 36678899999999998887643321 2337789999999999999999998776432 2345678899999999
Q ss_pred CCCCcccHHHHHHHHHHc
Q 009091 484 DNSGYITRDELETAMKDY 501 (544)
Q Consensus 484 d~dG~Is~~el~~~l~~~ 501 (544)
|+||.|+.+||..++...
T Consensus 140 d~dG~Is~~Ef~~~~~~f 157 (174)
T d2scpa_ 140 NNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp TCSSEECHHHHHHHHHHH
T ss_pred CCCCcEeHHHHHHHHHHH
Confidence 999999999999887653
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.57 E-value=6.6e-09 Score=80.69 Aligned_cols=69 Identities=20% Similarity=0.283 Sum_probs=55.6
Q ss_pred hHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCC-------CCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSK-------LSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 395 ~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~-------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
.+..+..+.++|..+| +++|.|+..||..+++..... .+...+..+|+.+|.|+||.|+|+||+..+..
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 3556778888999997 678999999999999986532 23456888999999999999999999876643
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.57 E-value=2.1e-08 Score=77.53 Aligned_cols=60 Identities=22% Similarity=0.380 Sum_probs=53.5
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhh
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISAT 462 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 462 (544)
.+.++|..+|.+++|+|+.+|+..++...+ ++.+++..+|+.+|.|++|.|+++||+.++
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am 71 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVAL 71 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Confidence 466889999999999999999999998765 588999999999999999999999997654
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.54 E-value=1.4e-07 Score=70.63 Aligned_cols=63 Identities=16% Similarity=0.458 Sum_probs=52.3
Q ss_pred HHHHHHHhhh-ccCCC-CcccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 472 EHLYKAFQYF-DKDNS-GYITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 472 ~~~~~~F~~~-D~d~d-G~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+..+|..| .++|+ ++++..||+.+|.. ++.. ++..++.+++.+|.|+||.|+|+||+.++.
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~ 79 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 79 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 4677889888 45555 57999999999987 3333 678899999999999999999999988764
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.53 E-value=2.3e-07 Score=85.93 Aligned_cols=87 Identities=17% Similarity=0.105 Sum_probs=62.5
Q ss_pred ccceecceecccCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 009091 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 94 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 173 (544)
+.|++.+..+.++.+.||++. .++..+++|+..... ......+.+|..++..|..+--+.+++.+...++..++|
T Consensus 14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~---~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv 88 (263)
T d1j7la_ 14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRY---KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGG---TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCc---ccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEE
Confidence 446666655555567899876 456678888774432 222335678999999887555578888888889999999
Q ss_pred EeccCCCChHHH
Q 009091 174 MELCSGGELFDK 185 (544)
Q Consensus 174 ~e~~~~~~L~~~ 185 (544)
|++++|.++.+.
T Consensus 89 ~~~l~G~~~~~~ 100 (263)
T d1j7la_ 89 MSEADGVLCSEE 100 (263)
T ss_dssp EECCSSEEHHHH
T ss_pred EEeccccccccc
Confidence 999999777543
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=1.6e-08 Score=87.11 Aligned_cols=99 Identities=9% Similarity=0.065 Sum_probs=70.9
Q ss_pred HHHHHHh--cCCCCCceeeehhhhhhhhcccc--ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHH
Q 009091 438 VKQLMDA--ADVDGNGTIDYIEFISATMHRYR--LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEII 513 (544)
Q Consensus 438 ~~~~~~~--~D~d~dg~i~~~eF~~~~~~~~~--~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~ 513 (544)
++++|.. +|.|++|+|+++|+...+..... ......+..+|...|.+++|.|+.+||..++..+.. ..++..+|
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~--r~ei~~~F 84 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP--RPEIDEIF 84 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC--CHHHHTTC
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC--HHHHHHHH
Confidence 4455554 79999999999999877643211 112234556789999999999999999999988764 36788999
Q ss_pred HHhCCCCCcceeHHHHHHHHhcCCC
Q 009091 514 SEVDTDNDGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 514 ~~~d~~~dg~i~~~eF~~~~~~~~~ 538 (544)
..+|.|++|.|+.+||..+|.....
T Consensus 85 ~~~d~d~~~~it~~el~~fL~~~Q~ 109 (170)
T d2zkmx1 85 TSYHAKAKPYMTKEHLTKFINQKQR 109 (170)
T ss_dssp C--------CCCHHHHHHHHHHTCC
T ss_pred HHHcCCCCCcccHHHHHHHHHHHhc
Confidence 9999999999999999999987544
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.44 E-value=1.1e-07 Score=53.04 Aligned_cols=33 Identities=39% Similarity=0.718 Sum_probs=28.4
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g 502 (544)
.++++.++|+.||+|+||+|+.+||..+++..|
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 356788999999999999999999999887654
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.42 E-value=3.2e-07 Score=87.58 Aligned_cols=102 Identities=21% Similarity=0.258 Sum_probs=79.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHH-----------------------------HHHHHHhcCCCCCc
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE-----------------------------VKQLMDAADVDGNG 451 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~-----------------------------~~~~~~~~D~d~dg 451 (544)
.+...|..+|.+++|.++..++...+...+....... +..+|..+|.|++|
T Consensus 189 ~~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G 268 (321)
T d1ij5a_ 189 ALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSG 268 (321)
T ss_dssp TSCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCS
T ss_pred hhhHHHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCC
Confidence 3445678888888888888888888887765433211 22368889999999
Q ss_pred eeeehhhhhhhhcccc-ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcC
Q 009091 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502 (544)
Q Consensus 452 ~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g 502 (544)
.|+..||..++..... ......+..+|+.+|.|+||+|+.+||..+|..+.
T Consensus 269 ~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml~~~ 320 (321)
T d1ij5a_ 269 QLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMF 320 (321)
T ss_dssp SEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhc
Confidence 9999999888765432 34556789999999999999999999999987653
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.39 E-value=1.7e-07 Score=70.73 Aligned_cols=63 Identities=24% Similarity=0.465 Sum_probs=51.2
Q ss_pred HHHHHHHhhhc-cCCC-CcccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 472 EHLYKAFQYFD-KDNS-GYITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 472 ~~~~~~F~~~D-~d~d-G~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+..+|..|. ++|+ ++++..||+.+|.. ++.. +++.++.+++.+|.|+||.|+|+||+.++.
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~ 79 (95)
T d1qlsa_ 9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIG 79 (95)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 45677888874 4554 67999999999965 3333 678899999999999999999999988764
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.26 E-value=9.4e-07 Score=66.49 Aligned_cols=63 Identities=19% Similarity=0.522 Sum_probs=49.0
Q ss_pred HHHHHHHhhhc-cCCC-CcccHHHHHHHHHH-----cCCC-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 472 EHLYKAFQYFD-KDNS-GYITRDELETAMKD-----YGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 472 ~~~~~~F~~~D-~d~d-G~Is~~el~~~l~~-----~g~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+..+|..|. ++|+ ++++..||+.+|.. ++.. ++..++.+++.+|.|+||.|+|+||+.++-
T Consensus 9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 79 (94)
T d1j55a_ 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA 79 (94)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 46777898883 4444 58999999999976 3333 567899999999999999999999998774
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.25 E-value=9.9e-07 Score=65.82 Aligned_cols=68 Identities=22% Similarity=0.382 Sum_probs=53.9
Q ss_pred HHHhhHHHHhcccC-CCCC-CccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 397 EEIKGLKTMFANMD-TDKS-GTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 397 ~~~~~l~~~F~~~D-~~~~-G~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
..+..+..+|..+. .+++ ++|+..||+.+++. ++.......++.+|+.+|.|+||.|+|+||+..+..
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 34566788898884 4555 67999999999998 334445677999999999999999999999876643
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.22 E-value=1.4e-06 Score=85.47 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=51.8
Q ss_pred ceecccCCeEEEEEEECCCCCeEEEEEEeecccc----ChhcHHHHHHHHHHHHhccCC--CCeeEEEEEEEeCCeEEEE
Q 009091 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLV----NKQDREDIKREIQIMQHLSGQ--QNIVEFRGAYEDRQSVHLV 173 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~~~~~~lv 173 (544)
+.||.|....||++.+..+++.++||.-...... .....++...|...|+.+..+ ..+++++.+ ++...++|
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv 109 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 109 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence 5689999999999998777889999965432111 112334566788888877543 345666655 34455789
Q ss_pred EeccCCCCh
Q 009091 174 MELCSGGEL 182 (544)
Q Consensus 174 ~e~~~~~~L 182 (544)
||++++..+
T Consensus 110 mE~L~~~~~ 118 (392)
T d2pula1 110 MEDLSHLKI 118 (392)
T ss_dssp ECCCTTSEE
T ss_pred EeccCCccc
Confidence 999977543
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.21 E-value=2.4e-06 Score=62.52 Aligned_cols=63 Identities=22% Similarity=0.491 Sum_probs=50.2
Q ss_pred HHHHHHHhhhc-cCC-CCcccHHHHHHHHHH-c----CC-C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHh
Q 009091 472 EHLYKAFQYFD-KDN-SGYITRDELETAMKD-Y----GI-G-DEASIKEIISEVDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 472 ~~~~~~F~~~D-~d~-dG~Is~~el~~~l~~-~----g~-~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 534 (544)
..+..+|..|- ++| .++++..||+.+|.. + .. . ++..++.++..+|.|+||.|+|+||+.++-
T Consensus 10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 45777898884 333 368999999999976 2 22 1 556789999999999999999999998764
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.13 E-value=4.4e-07 Score=53.07 Aligned_cols=31 Identities=29% Similarity=0.530 Sum_probs=28.1
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhC
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLG 430 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 430 (544)
++++++|+.||+|++|+|+..||+.+|+.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 4688999999999999999999999988765
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.03 E-value=2.6e-06 Score=63.96 Aligned_cols=67 Identities=25% Similarity=0.397 Sum_probs=50.0
Q ss_pred HHhhHHHHhcccCC-CCC-CccCHHHHHHHHHH-h----CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 398 EIKGLKTMFANMDT-DKS-GTITYEELKTGLAR-L----GSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 398 ~~~~l~~~F~~~D~-~~~-G~I~~~e~~~~l~~-~----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
.+..+..+|..+.. +++ ++++..||+..++. + +...+...++.+++.+|.|+||.|+|+||+..+..
T Consensus 7 ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 7 AMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 44567788888753 343 58999999999998 2 22334556999999999999999999999876643
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=97.99 E-value=1.7e-06 Score=65.05 Aligned_cols=67 Identities=19% Similarity=0.318 Sum_probs=52.6
Q ss_pred HHhhHHHHhcccC-CCCC-CccCHHHHHHHHHH-----hCCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhhc
Q 009091 398 EIKGLKTMFANMD-TDKS-GTITYEELKTGLAR-----LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMH 464 (544)
Q Consensus 398 ~~~~l~~~F~~~D-~~~~-G~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 464 (544)
.+..+..+|..+. .+++ ++|+..||+.++.. ++..-....++.+|+.+|.|+||.|+|+||+..+..
T Consensus 7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~ 80 (95)
T d1qlsa_ 7 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 80 (95)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 3556778888774 3454 67999999999886 444456677999999999999999999999876643
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.98 E-value=7.3e-06 Score=74.97 Aligned_cols=75 Identities=11% Similarity=0.089 Sum_probs=52.2
Q ss_pred eecccCC-eEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCC-CeeEEEEEEEeCCeEEEEEeccC
Q 009091 101 ELGRGQF-GITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ-NIVEFRGAYEDRQSVHLVMELCS 178 (544)
Q Consensus 101 ~lg~G~~-g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-~iv~~~~~~~~~~~~~lv~e~~~ 178 (544)
.+..|.. +.||++... ++..+++|..... ....+..|...++.|..+. .+.+++.+..+++..++||++++
T Consensus 17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~------~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~ 89 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 89 (255)
T ss_dssp ECSCTTSSCEEEEEECT-TSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred EcCCcccCCeEEEEEeC-CCCEEEEEeCCcc------CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence 3444543 678988753 4666888865322 2234678888888876432 26778888888889999999998
Q ss_pred CCCh
Q 009091 179 GGEL 182 (544)
Q Consensus 179 ~~~L 182 (544)
|.++
T Consensus 90 G~~~ 93 (255)
T d1nd4a_ 90 GQDL 93 (255)
T ss_dssp SEET
T ss_pred cccc
Confidence 8665
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.90 E-value=6.7e-06 Score=45.68 Aligned_cols=31 Identities=32% Similarity=0.407 Sum_probs=27.6
Q ss_pred hhHHHHhcccCCCCCCccCHHHHHHHHHHhC
Q 009091 400 KGLKTMFANMDTDKSGTITYEELKTGLARLG 430 (544)
Q Consensus 400 ~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 430 (544)
+++.+.|..||+|.||+|+.+||..+++..|
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 5688899999999999999999999988653
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.80 E-value=1.7e-05 Score=57.89 Aligned_cols=66 Identities=18% Similarity=0.303 Sum_probs=50.1
Q ss_pred HHhhHHHHhcccCC-CC-CCccCHHHHHHHHHH-hCCC-----CCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 398 EIKGLKTMFANMDT-DK-SGTITYEELKTGLAR-LGSK-----LSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 398 ~~~~l~~~F~~~D~-~~-~G~I~~~e~~~~l~~-~~~~-----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
.+..+..+|..+.. ++ .++++..||+.++.. ++.- .....+..+|+.+|.|+||.|+|+||+..+.
T Consensus 8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 34557778888853 33 378999999999998 3221 2345589999999999999999999987653
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.70 E-value=1.5e-05 Score=62.91 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=33.6
Q ss_pred CCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcC------CCCCceeeehhhhhhhhcccccc--chHHHHHHHhhhccC
Q 009091 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAAD------VDGNGTIDYIEFISATMHRYRLE--RDEHLYKAFQYFDKD 484 (544)
Q Consensus 413 ~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D------~d~dg~i~~~eF~~~~~~~~~~~--~~~~~~~~F~~~D~d 484 (544)
..+.|+++++.++.+... ++..+++.+++.|- ...+|.|++++|..++....... .....+.+|+.||+|
T Consensus 4 ~~s~l~p~~l~~L~~~T~--fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~ 81 (118)
T d1tuza_ 4 ERGLISPSDFAQLQKYME--YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETG 81 (118)
T ss_dssp CCSCSCHHHHHHHHHHHH--HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCC
T ss_pred ccCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccc
Confidence 455677777666555433 23444555544441 12345555555544433222211 123344455555555
Q ss_pred CC
Q 009091 485 NS 486 (544)
Q Consensus 485 ~d 486 (544)
+|
T Consensus 82 ~d 83 (118)
T d1tuza_ 82 HC 83 (118)
T ss_dssp CC
T ss_pred cc
Confidence 44
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=1e-05 Score=63.92 Aligned_cols=76 Identities=9% Similarity=0.041 Sum_probs=60.7
Q ss_pred hhhhHHHHhhHHHHhcccCC---CCCCccCHHHHHHHHHHhCCC--CCHHHHHHHHHhcCCCCC--------ceeeehhh
Q 009091 392 EALSEEEIKGLKTMFANMDT---DKSGTITYEELKTGLARLGSK--LSETEVKQLMDAADVDGN--------GTIDYIEF 458 (544)
Q Consensus 392 ~~~~~~~~~~l~~~F~~~D~---~~~G~I~~~e~~~~l~~~~~~--~~~~~~~~~~~~~D~d~d--------g~i~~~eF 458 (544)
..|+..+++.+++.|+.... ..+|.|+.++|+.++..+... .+..-++++|..||.|++ |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 45899999999999975532 467999999999999886432 346788999999999977 88999999
Q ss_pred hhhhhcccc
Q 009091 459 ISATMHRYR 467 (544)
Q Consensus 459 ~~~~~~~~~ 467 (544)
+..+.....
T Consensus 100 v~~LS~l~~ 108 (118)
T d1tuza_ 100 SCYFSLLEG 108 (118)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHcC
Confidence 887755433
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.28 E-value=0.00043 Score=67.25 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=51.3
Q ss_pred ceecccCCeEEEEEEECC-------CCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 009091 100 KELGRGQFGITYLCTENS-------TGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL 172 (544)
Q Consensus 100 ~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 172 (544)
+.|+.|-.-.+|++.... .+..|.+++.-. ....-...+|..+++.+..+.-..++++++.. .+
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-----~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~ 118 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-----PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 118 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-----CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-----cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ce
Confidence 568889999999988653 235566666531 11233456899999999866556688887743 58
Q ss_pred EEeccCCCCh
Q 009091 173 VMELCSGGEL 182 (544)
Q Consensus 173 v~e~~~~~~L 182 (544)
|+||++|.+|
T Consensus 119 I~efi~g~~l 128 (395)
T d1nw1a_ 119 LEEYIPSRPL 128 (395)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeccccC
Confidence 9999987544
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=9.5e-05 Score=59.90 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=43.9
Q ss_pred HHHHHHhhhccC-CCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHhcC
Q 009091 473 HLYKAFQYFDKD-NSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSG 536 (544)
Q Consensus 473 ~~~~~F~~~D~d-~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 536 (544)
.+...|..+|.| .||+|+..||+.+...+ ...+.=++..|...|.|+||.|++.||..++.-.
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L-~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v~ 141 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL-IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIK 141 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTT-STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCC
T ss_pred cceeehhhcCCCCCCCccCHHHHHHHHHhh-cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCCC
Confidence 455668888888 48888888887754322 2233446777888888888888888888777644
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.0022 Score=60.27 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=46.5
Q ss_pred cCCeEEEEEEECCCCCeEEEEEEeeccccChhcHHHHHHHHHHHHhccCCC-CeeEEEE-----EEEeCCeEEEEEeccC
Q 009091 105 GQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ-NIVEFRG-----AYEDRQSVHLVMELCS 178 (544)
Q Consensus 105 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-~iv~~~~-----~~~~~~~~~lv~e~~~ 178 (544)
+.--.||++.. .+|..+++|+.... ....+.+..|+..+..|..+. -++..+. .+...+..+.++++++
T Consensus 33 s~EN~vy~v~~-~dg~~~VlK~~rp~----~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~ 107 (325)
T d1zyla1 33 SYENRVYQFQD-EDRRRFVVKFYRPE----RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 107 (325)
T ss_dssp CSSSEEEEECC-TTCCCEEEEEECTT----TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred cccceeEEEEc-CCCCEEEEEEeCCC----CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecC
Confidence 44568999875 46888999987432 234577888999998886321 1111111 2234677889999997
Q ss_pred CCC
Q 009091 179 GGE 181 (544)
Q Consensus 179 ~~~ 181 (544)
|..
T Consensus 108 G~~ 110 (325)
T d1zyla1 108 GRQ 110 (325)
T ss_dssp CEE
T ss_pred CcC
Confidence 643
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.92 E-value=0.011 Score=43.81 Aligned_cols=68 Identities=12% Similarity=0.163 Sum_probs=54.6
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHc-CC-C-CHHHHHHHHHHhCCCC----CcceeHHHHHHHHhcCCC
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDY-GI-G-DEASIKEIISEVDTDN----DGRINYEEFCTMMRSGTP 538 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g~-~-~~~~~~~~~~~~d~~~----dg~i~~~eF~~~~~~~~~ 538 (544)
...+|..+|+.|-. +.+.++.++|..+|... +. . +++.+..+|..+..+. .|.++++.|..+|.+...
T Consensus 6 ~R~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~N 80 (94)
T d1qasa1 6 QRAEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADG 80 (94)
T ss_dssp CCHHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSSTT
T ss_pred ccHHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCccc
Confidence 45678999999954 45789999999999885 33 2 7788999999998764 377999999999987643
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.76 E-value=0.0056 Score=49.23 Aligned_cols=60 Identities=20% Similarity=0.228 Sum_probs=45.1
Q ss_pred HHHHHHHhcCCC-CCceeeehhhhhhhhccccccchHHHHHHHhhhccCCCCcccHHHHHHHH
Q 009091 437 EVKQLMDAADVD-GNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAM 498 (544)
Q Consensus 437 ~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l 498 (544)
-+..+|..+|.| +||.|+-.|...+... ....+.-++.-|+.+|.|+||.||..|....|
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~--L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf 138 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAP--LIPMEHCTTRFFETCDLDNDKYIALDEWAGCF 138 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGST--TSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred cceeehhhcCCCCCCCccCHHHHHHHHHh--hcCCchHHHHHHHHhcCCCCCcCCHHHHHHHc
Confidence 466789999998 5899999887654321 12334557788899999999999999887665
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.72 E-value=0.0051 Score=57.26 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=24.5
Q ss_pred cCCEeecCCCCceeeecCCCCccEEEeecCCcc
Q 009091 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246 (544)
Q Consensus 214 ~~ivHrDikp~Nill~~~~~~~~vkl~Dfg~a~ 246 (544)
.|+||+|+.+.||++.. +...-|+||+.+.
T Consensus 183 ~giIHgDl~~dNvl~~~---~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLG---DELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEET---TEEEEECCCTTCE
T ss_pred cccccCCcchhhhhccc---ccceeEecccccc
Confidence 47999999999999953 3356789999874
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.94 E-value=0.067 Score=36.62 Aligned_cols=63 Identities=16% Similarity=0.368 Sum_probs=50.1
Q ss_pred ccchHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCCCHHHHHHHHHHhCC-----CCCcceeHHHHHHHHhcCC
Q 009091 468 LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDT-----DNDGRINYEEFCTMMRSGT 537 (544)
Q Consensus 468 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~~~~~~~~~~~~~d~-----~~dg~i~~~eF~~~~~~~~ 537 (544)
..+.+++..+|+.+ .++..+|+.+||++-| +.++++-+++.+-. -..|..+|..|.+.|-..+
T Consensus 4 ~~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ges 71 (73)
T d1h8ba_ 4 TDTAEQVIASFRIL-ASDKPYILAEELRREL------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYGES 71 (73)
T ss_dssp CSTHHHHHHHHHHH-TTSCSSBCHHHHHHHS------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTCCS
T ss_pred cccHHHHHHHHHHH-hCCCCeeCHHHHHhhc------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhccc
Confidence 34668899999999 5778999999999765 45788888888853 2367899999998876543
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=92.64 E-value=0.16 Score=33.10 Aligned_cols=72 Identities=21% Similarity=0.303 Sum_probs=57.3
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCC-CCC-ceeeehhhhhhhhc
Q 009091 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV-DGN-GTIDYIEFISATMH 464 (544)
Q Consensus 393 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~-d~d-g~i~~~eF~~~~~~ 464 (544)
.+.+++..+-.++|..||.|....-...+-...|..+|...+.-+.+.+++..-. .+| ..|.-+|++..+..
T Consensus 7 algpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcsk 80 (86)
T d1j7qa_ 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK 80 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence 4566778888999999999988888889999999999999999999999987632 222 24666788776654
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.42 E-value=0.099 Score=38.37 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=46.1
Q ss_pred hHHHHhcccCCCCCCccCHHHHHHHHHHhCC--CCCHHHHHHHHHhcCCCC----Cceeeehhhhhhhhccc
Q 009091 401 GLKTMFANMDTDKSGTITYEELKTGLARLGS--KLSETEVKQLMDAADVDG----NGTIDYIEFISATMHRY 466 (544)
Q Consensus 401 ~l~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--~~~~~~~~~~~~~~D~d~----dg~i~~~eF~~~~~~~~ 466 (544)
++..+|..+-. +.+.|+.++|...|+..-. ..+.+.+..++..+..+. .+.++++.|..++....
T Consensus 9 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 9 EIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp HHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSST
T ss_pred HHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCcc
Confidence 45566666643 3467999999999998532 457777888888887653 36788888888776543
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=88.62 E-value=0.77 Score=29.78 Aligned_cols=66 Identities=18% Similarity=0.319 Sum_probs=52.5
Q ss_pred chHHHHHHHhhhccCCCCcccHHHHHHHHHHcCCC-CHHHHHHHHHHhC-CCCC-cceeHHHHHHHHhc
Q 009091 470 RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVD-TDND-GRINYEEFCTMMRS 535 (544)
Q Consensus 470 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g~~-~~~~~~~~~~~~d-~~~d-g~i~~~eF~~~~~~ 535 (544)
..++...+|..||.|..+.--..+-..+|..+|.. +..+.+.++++.- ..+| ..|.-+||+.++.+
T Consensus 12 ekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcsk 80 (86)
T d1j7qa_ 12 EKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence 34567789999999999888999999999999988 8889998888753 3333 34788888877654
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=87.55 E-value=0.072 Score=36.75 Aligned_cols=19 Identities=32% Similarity=0.627 Sum_probs=9.5
Q ss_pred hCCCCCcceeHHHHHHHHh
Q 009091 516 VDTDNDGRINYEEFCTMMR 534 (544)
Q Consensus 516 ~d~~~dg~i~~~eF~~~~~ 534 (544)
+|.|+||.|+..++..+.+
T Consensus 39 aDvn~DG~Id~~D~~~l~~ 57 (71)
T d1dava_ 39 ADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp TCSSSSSSCSSHHHHHHHH
T ss_pred eecCCCCCcCHHHHHHHHH
Confidence 4555555555555544433
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=86.77 E-value=0.54 Score=30.74 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=23.3
Q ss_pred ccCCCCcccHHHHHHHHHHc-CCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 009091 482 DKDNSGYITRDELETAMKDY-GIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533 (544)
Q Consensus 482 D~d~dG~Is~~el~~~l~~~-g~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 533 (544)
|.|+||.|+..++..+..-+ +.... .+.-+...|.|+||.|+..+...++
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~--~~~~~~aaDvn~Dg~i~i~D~~~l~ 52 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITL--TDDAKARADVDKNGSINAADVLLLS 52 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCC--CHHHHHHHCTTCSSCCSHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCC--ChhhhhccccCCCCCCCHHHHHHHH
Confidence 44556666665555544332 22210 0112344566666666655555443
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=85.90 E-value=0.31 Score=31.95 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=14.1
Q ss_pred HHhhhccCCCCcccHHHHHHHHH
Q 009091 477 AFQYFDKDNSGYITRDELETAMK 499 (544)
Q Consensus 477 ~F~~~D~d~dG~Is~~el~~~l~ 499 (544)
.|...|.|+||.|+..++..+.+
T Consensus 31 ~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 31 AKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp HHHHHCTTCSSCCSHHHHHHHHH
T ss_pred hhhccccCCCCCCCHHHHHHHHH
Confidence 35556667777776666655443
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=81.05 E-value=0.15 Score=35.04 Aligned_cols=19 Identities=11% Similarity=0.137 Sum_probs=10.2
Q ss_pred CCCCCCccCHHHHHHHHHH
Q 009091 410 DTDKSGTITYEELKTGLAR 428 (544)
Q Consensus 410 D~~~~G~I~~~e~~~~l~~ 428 (544)
|.|+||.|+..++..+++.
T Consensus 8 DvN~DG~Vd~~D~~~~~~~ 26 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRY 26 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHH
Confidence 4455555555555554444
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=80.36 E-value=2.5 Score=30.86 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=50.5
Q ss_pred HHHHhhHHHHhcccCCCCCCccCHHHHHHHHHHh----CCCCCHHHHHHHHHhcCCCCCceeeehhhhhhhh
Q 009091 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARL----GSKLSETEVKQLMDAADVDGNGTIDYIEFISATM 463 (544)
Q Consensus 396 ~~~~~~l~~~F~~~D~~~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 463 (544)
..+++.....|..|-.-..-.++-..|..+++.- +..++..++.-+|..+-.. ..+|+|++|...+.
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k-~~ri~f~~F~~aL~ 74 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGP-KKKATFDETKKVLA 74 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCS-SSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCC-CCCcCHHHHHHHHH
Confidence 4566667777777763333469999999999983 3568899999999998654 45699999987664
|