Citrus Sinensis ID: 009102

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540---

MGIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTREEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPNFSARACVV

ccHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHccccEEEEccccccEEEEEccccccccccccccccccccccccEEEHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHccccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHcccEEEEEccccccEEEEEEEEcccccEEEEEEEcccccEEEEEEEcccccEEEEcccccccccccccccccEEEEccccccccccEEEEEEEccccccccccEEEEccccccccccccccccccEEccccccEEEcccEEEEEEEcccccccccc

cccHEEEEEEEHHHHHHEccccccEEEEEEcccEEEEEEcccEEEEEEcccccccccccccccccccEcccccccHHHHHHHHHccccEEEEccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEHHHccccccccccccccccHHHHHHHHHHHHHccccEcEEEEccccccccccccEEcHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccEEEEEEEEEEcccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccccccHHHHHHHHHHHccccEEEEEccccccEEEEEEEccccccEEEEEEEEccccEEEEEEcccccccEEEEEEEccccccccccEEEEEEEcccccccccccHcEEEEccccccccccEEEEccEEEEEcccccccccccEEccccccEEEcccEEEEEEEccccccEEEc

MGIFLSLFIYLISYLPVILARDVTRVTIFVDAtktvatndehficatvdwwphdkcnynhcpwgnssvinldlshPLLANAIQAFQSLRIriggslqdqvlydvgdlkapchpfrkmkdglfgfskgcLHMQRWDELNQLFNRTRAIVSFGLnalhgrhnirhnawggawdsnnaRDFLKYTISMGyqidsweygnelsgrtsigasvdaelygkdLINLKNIINELyknssskptilapggffdqEWYAKFLQvsgsnvvngvthhiynlgpgvdpnlvskilnpqrlsRVSETFGNLKQTIEKhgpwasawvgesggaynsggrhvsntFVNSFWYLDqlgmsskyntkVYCRqtlvggnygllnattfipnpdyYSALLWHRLMGKGVLsvatdgssslrsyaHCSKEREGITLLLINLSNQTDYVISVHNSMnmkltvkgkdingesslsRDIKRAVSWvgstasdghltreeyhltpkdgylqsQTMVLNgiplqlaedegipkldpvrvdvnspiyitHLSIAFivfpnfsaracvv

MGIFLSLFIYLISYLPVILARDVTRVTIFVDAtktvatndEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRhnawggawdsnNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVswvgstasdghltrEEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPNFSARACVV

**IFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSMNMKLTVK*************IKRAVSWVGSTASDGHLTREEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPNFSARAC**

*GIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSMNMKLTVKG******************************REEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPNFSARACVV

*GIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTREEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPNFSARACVV

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooo

SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		543	2.2.26 [Sep-21-2011]
Q9FF10		543	Heparanase-like protein 1	yes	no	0.988	0.988	0.628	0.0
Q8L608		539	Heparanase-like protein 2	no	no	0.979	0.987	0.621	0.0
Q9FZP1		536	Heparanase-like protein 3	no	no	0.965	0.977	0.481	1e-145
Q9LRC8		527	Baicalin-beta-D-glucuroni	N/A	no	0.907	0.935	0.382	1e-100
Q90YK5		523	Heparanase OS=Gallus gall	yes	no	0.633	0.657	0.301	1e-33
Q9Y251		543	Heparanase OS=Homo sapien	yes	no	0.633	0.633	0.289	1e-29
Q9MYY0		545	Heparanase OS=Bos taurus	yes	no	0.627	0.625	0.290	3e-29
Q71RP1		536	Heparanase OS=Rattus norv	yes	no	0.661	0.669	0.289	2e-27
Q6YGZ1		535	Heparanase OS=Mus musculu	yes	no	0.633	0.642	0.287	6e-25
Q8WWQ2		592	Inactive heparanase-2 OS=	no	no	0.583	0.535	0.267	1e-21

>sp\|Q9FF10\|HPSE1_ARATH Heparanase-like protein 1 OS=Arabidopsis thaliana GN=At5g07830 PE=2 SV=1	Back alignment and function desciption

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/546 (62%), Positives = 427/546 (78%), Gaps = 9/546 (1%)

Query: 1   MGIFLSLFIYLISYLPVI----LARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKC 56
           MG  + + +  +  L ++    +A+++ R +I +   + V   DE+F+CAT+DWWPHDKC
Sbjct: 1   MGFRVCVIVVFLGCLLLVPEKTMAQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKC 60

Query: 57  NYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRK 116
           NY+ CPWG SSVIN+DL+ PLL  AI+AF+ LRIRIGGSLQDQV+YDVG+LK PC PF+K
Sbjct: 61  NYDQCPWGYSSVINMDLTRPLLTKAIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQK 120

Query: 117 MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 176
           M  GLFGFSKGCLHM+RWDELN     T A+V+FGLNAL GRH +R  AWGGAWD  N +
Sbjct: 121 MNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQ 180

Query: 177 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNS-SSKP 235
           DFL YT+S GY IDSWE+GNELSG + +GASV AELYGKDLI LK++IN++YKNS   KP
Sbjct: 181 DFLNYTVSKGYVIDSWEFGNELSG-SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKP 239

Query: 236 TILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSET 295
            ++APGGF++Q+WY K L++SG +VV+ VTHHIYNLG G DP LV KI++P  LS+VS+T
Sbjct: 240 ILVAPGGFYEQQWYTKLLEISGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKT 299

Query: 296 FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCR 355
           F ++ QTI++HGPWAS WVGESGGAYNSGGRHVS+TF++SFWYLDQLGMS+++NTKVYCR
Sbjct: 300 FKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFWYLDQLGMSARHNTKVYCR 359

Query: 356 QTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGI 415
           QTLVGG YGLL   TF+PNPDYYSALLWHRLMGKGVL+V TDG   LR YAHCSK R G+
Sbjct: 360 QTLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLAVQTDGPPQLRVYAHCSKGRAGV 419

Query: 416 TLLLINLSNQTDYVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTR 475
           TLLLINLSNQ+D+ +SV N +N+ L  + +    + SL   +KR  SW+GS ASDG+L R
Sbjct: 420 TLLLINLSNQSDFTVSVSNGINVVLNAESRK---KKSLLDTLKRPFSWIGSKASDGYLNR 476

Query: 476 EEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPN 535
           EEYHLTP++G L+S+TMVLNG  L+      IP L+PV   VNSP+ +  LS++FIV PN
Sbjct: 477 EEYHLTPENGVLRSKTMVLNGKSLKPTATGDIPSLEPVLRSVNSPLNVLPLSMSFIVLPN 536

Query: 536 FSARAC 541
           F A AC
Sbjct: 537 FDASAC 542

Endoglycosidase which is a cell surface and extracellular matrix-degrading enzyme. Cleaves heparan sulfate proteoglycans (HSPGs) into heparan sulfate side chains and core proteoglycans.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: -EC: .EC: -

>sp\|Q8L608\|HPSE2_ARATH Heparanase-like protein 2 OS=Arabidopsis thaliana GN=At5g61250 PE=2 SV=1	Back alignment and function description

>sp\|Q9FZP1\|HPSE3_ARATH Heparanase-like protein 3 OS=Arabidopsis thaliana GN=At5g34940 PE=2 SV=2	Back alignment and function description

>sp\|Q9LRC8\|BAGLU_SCUBA Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis GN=SGUS PE=1 SV=1	Back alignment and function description

>sp\|Q90YK5\|HPSE_CHICK Heparanase OS=Gallus gallus GN=HPSE PE=1 SV=1	Back alignment and function description

>sp\|Q9Y251\|HPSE_HUMAN Heparanase OS=Homo sapiens GN=HPSE PE=1 SV=2	Back alignment and function description

>sp\|Q9MYY0\|HPSE_BOVIN Heparanase OS=Bos taurus GN=HPSE PE=2 SV=2	Back alignment and function description

>sp\|Q71RP1\|HPSE_RAT Heparanase OS=Rattus norvegicus GN=Hpse PE=2 SV=1	Back alignment and function description

>sp\|Q6YGZ1\|HPSE_MOUSE Heparanase OS=Mus musculus GN=Hpse PE=1 SV=3	Back alignment and function description

>sp\|Q8WWQ2\|HPSE2_HUMAN Inactive heparanase-2 OS=Homo sapiens GN=HPSE2 PE=1 SV=3	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		543
255547277		539	Heparanase-2, putative [Ricinus communis	0.966	0.974	0.747	0.0
225457293		539	PREDICTED: heparanase-like protein 1-lik	0.968	0.975	0.710	0.0
449486980		536	PREDICTED: heparanase-like protein 1-lik	0.977	0.990	0.701	0.0
449439297		536	PREDICTED: heparanase-like protein 1-lik	0.959	0.972	0.711	0.0
449477170		540	PREDICTED: LOW QUALITY PROTEIN: heparana	0.992	0.998	0.682	0.0
449440822		540	PREDICTED: heparanase-like protein 1-lik	0.992	0.998	0.680	0.0
224133012		541	predicted protein [Populus trichocarpa]	0.976	0.979	0.687	0.0
297733910		513	unnamed protein product [Vitis vinifera]	0.920	0.974	0.689	0.0
356507092		1201	PREDICTED: uncharacterized protein LOC10	0.963	0.435	0.657	0.0
356562599		547	PREDICTED: heparanase-like protein 1-lik	0.992	0.985	0.642	0.0

>gi\|255547277\|ref\|XP_002514696.1\| Heparanase-2, putative [Ricinus communis] gi\|223546300\|gb\|EEF47802.1\| Heparanase-2, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/527 (74%), Positives = 458/527 (86%), Gaps = 2/527 (0%)

Query: 16  PVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSH 75
           PVI A+DV   TI VD T TVA  D++FICAT+DWWPHDKC+YN CPWG SSV+NL+LSH
Sbjct: 15  PVIFAQDVKHATIVVDGTVTVAETDDNFICATLDWWPHDKCDYNQCPWGYSSVLNLNLSH 74

Query: 76  PLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWD 135
           PLLA A+QAF+ LRIRIGGSLQD+VLYDVGDLK PCHPFRKMKDGLFGFSKGCLHM RWD
Sbjct: 75  PLLAKAMQAFRHLRIRIGGSLQDRVLYDVGDLKFPCHPFRKMKDGLFGFSKGCLHMNRWD 134

Query: 136 ELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYG 195
           ELN LF++T AIV+F LNALHGRH IR   WGGAWDS+NA DF+ YT+S G++IDSWE+G
Sbjct: 135 ELNLLFSKTGAIVTFSLNALHGRHQIRRGVWGGAWDSSNAYDFMNYTVSKGHKIDSWEFG 194

Query: 196 NELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQV 255
           NELSG + +GASV+AELYGKD+INLKNIINELYKNS  KP+++APGGFF+Q+WYA+FL+V
Sbjct: 195 NELSG-SGVGASVNAELYGKDVINLKNIINELYKNSGFKPSLIAPGGFFNQQWYAEFLKV 253

Query: 256 SGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVG 315
           SGS ++N +THHIYNLG G+DPNLVSKIL+P  LS+++ETF  L QTI++HGPW+SAWVG
Sbjct: 254 SGSGIINILTHHIYNLGAGIDPNLVSKILDPHYLSKITETFSGLAQTIQQHGPWSSAWVG 313

Query: 316 ESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNP 375
           ESGGAYNSGGRHVSNTFVNSFWYLDQLG++SKYNTK YCRQTL+GGNYGLLN TT +PNP
Sbjct: 314 ESGGAYNSGGRHVSNTFVNSFWYLDQLGLASKYNTKAYCRQTLIGGNYGLLNTTTLVPNP 373

Query: 376 DYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGITLLLINLSNQTDYVISVHNS 435
           DYYSALLWHRLMGKGVL+V +D S  LR+YAHCS+ R G+TLLLINLSNQTD++ISV NS
Sbjct: 374 DYYSALLWHRLMGKGVLAVGSDASPYLRAYAHCSRGRAGVTLLLINLSNQTDFIISVQNS 433

Query: 436 MNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTREEYHLTPKDGYLQSQTMVLN 495
           M MKL VK ++I  ES + R +KR+VSWVG+ ASD  LTREEYHLT KDGYL+SQTMVLN
Sbjct: 434 MAMKLHVK-ENIQRESRIVRGLKRSVSWVGNRASDESLTREEYHLTSKDGYLRSQTMVLN 492

Query: 496 GIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPNFSARACV 542
           GIPL+L ED  IP+LDPV  +V SPIYI+ LSIAFIVFPNF A +C 
Sbjct: 493 GIPLELTEDGEIPRLDPVHNNVKSPIYISPLSIAFIVFPNFDAPSCA 539

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225457293\|ref\|XP_002284470.1\| PREDICTED: heparanase-like protein 1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449486980\|ref\|XP_004157460.1\| PREDICTED: heparanase-like protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449439297\|ref\|XP_004137422.1\| PREDICTED: heparanase-like protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449477170\|ref\|XP_004154950.1\| PREDICTED: LOW QUALITY PROTEIN: heparanase-like protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449440822\|ref\|XP_004138183.1\| PREDICTED: heparanase-like protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224133012\|ref\|XP_002321464.1\| predicted protein [Populus trichocarpa] gi\|222868460\|gb\|EEF05591.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297733910\|emb\|CBI15157.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356507092\|ref\|XP_003522305.1\| PREDICTED: uncharacterized protein LOC100807012 [Glycine max]	Back alignment and taxonomy information

>gi\|356562599\|ref\|XP_003549557.1\| PREDICTED: heparanase-like protein 1-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		543
TAIR\|locus:2142768		543	GUS2 "AT5G07830" [Arabidopsis	0.988	0.988	0.628	9.2e-194
TAIR\|locus:2163243		539	GUS1 "AT5G61250" [Arabidopsis	0.988	0.996	0.618	2.6e-189
TAIR\|locus:2183542		536	GUS3 "AT5G34940" [Arabidopsis	0.959	0.972	0.486	5.2e-136
UNIPROTKB\|Q9LRC8		527	SGUS "Baicalin-beta-D-glucuron	0.780	0.804	0.401	1.4e-99
UNIPROTKB\|F1RVE1		542	HPSE "Uncharacterized protein"	0.486	0.487	0.359	1.3e-37
UNIPROTKB\|F1NYI9		523	HPSE "Heparanase" [Gallus gall	0.484	0.502	0.340	2.9e-36
UNIPROTKB\|E2RST8		545	HPSE "Uncharacterized protein"	0.486	0.484	0.349	9.3e-36
UNIPROTKB\|Q90YK5		523	HPSE "Heparanase" [Gallus gall	0.486	0.504	0.331	1.1e-35
ZFIN\|ZDB-GENE-041111-200		546	hpse "heparanase" [Danio rerio	0.545	0.542	0.321	6.7e-35
UNIPROTKB\|F1N1G1		545	HPSE "Heparanase" [Bos taurus	0.506	0.504	0.336	1.6e-32

TAIR\|locus:2142768 GUS2 "AT5G07830" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1877 (665.8 bits), Expect = 9.2e-194, P = 9.2e-194
 Identities = 343/546 (62%), Positives = 427/546 (78%)

Query:     1 MGIFLSLFIYLISYLPVI----LARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKC 56
             MG  + + +  +  L ++    +A+++ R +I +   + V   DE+F+CAT+DWWPHDKC
Sbjct:     1 MGFRVCVIVVFLGCLLLVPEKTMAQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKC 60

Query:    57 NYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRK 116
             NY+ CPWG SSVIN+DL+ PLL  AI+AF+ LRIRIGGSLQDQV+YDVG+LK PC PF+K
Sbjct:    61 NYDQCPWGYSSVINMDLTRPLLTKAIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQK 120

Query:   117 MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 176
             M  GLFGFSKGCLHM+RWDELN     T A+V+FGLNAL GRH +R  AWGGAWD  N +
Sbjct:   121 MNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQ 180

Query:   177 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNS-SSKP 235
             DFL YT+S GY IDSWE+GNELSG + +GASV AELYGKDLI LK++IN++YKNS   KP
Sbjct:   181 DFLNYTVSKGYVIDSWEFGNELSG-SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKP 239

Query:   236 TILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSET 295
              ++APGGF++Q+WY K L++SG +VV+ VTHHIYNLG G DP LV KI++P  LS+VS+T
Sbjct:   240 ILVAPGGFYEQQWYTKLLEISGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKT 299

Query:   296 FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCR 355
             F ++ QTI++HGPWAS WVGESGGAYNSGGRHVS+TF++SFWYLDQLGMS+++NTKVYCR
Sbjct:   300 FKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFWYLDQLGMSARHNTKVYCR 359

Query:   356 QTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKEREGI 415
             QTLVGG YGLL   TF+PNPDYYSALLWHRLMGKGVL+V TDG   LR YAHCSK R G+
Sbjct:   360 QTLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLAVQTDGPPQLRVYAHCSKGRAGV 419

Query:   416 TLLLINLSNQTDYVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTR 475
             TLLLINLSNQ+D+ +SV N +N+ L  + +    + SL   +KR  SW+GS ASDG+L R
Sbjct:   420 TLLLINLSNQSDFTVSVSNGINVVLNAESRK---KKSLLDTLKRPFSWIGSKASDGYLNR 476

Query:   476 EEYHLTPKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVNSPIYITHLSIAFIVFPN 535
             EEYHLTP++G L+S+TMVLNG  L+      IP L+PV   VNSP+ +  LS++FIV PN
Sbjct:   477 EEYHLTPENGVLRSKTMVLNGKSLKPTATGDIPSLEPVLRSVNSPLNVLPLSMSFIVLPN 536

Query:   536 FSARAC 541
             F A AC
Sbjct:   537 FDASAC 542

GO:0004566 "beta-glucuronidase activity" evidence=ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

TAIR\|locus:2163243 GUS1 "AT5G61250" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2183542 GUS3 "AT5G34940" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9LRC8 SGUS "Baicalin-beta-D-glucuronidase" [Scutellaria baicalensis (taxid:65409)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RVE1 HPSE "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NYI9 HPSE "Heparanase" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RST8 HPSE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q90YK5 HPSE "Heparanase" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-041111-200 hpse "heparanase" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N1G1 HPSE "Heparanase" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FF10	HPSE1_ARATH	3, ., 2, ., -, ., -	0.6282	0.9889	0.9889	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_XV000236	SubName- Full=Putative uncharacterized protein; (541 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		543
pfam03662		320	pfam03662, Glyco_hydro_79n, Glycosyl hydrolase fam	0.0

>gnl\|CDD\|190706 pfam03662, Glyco_hydro_79n, Glycosyl hydrolase family 79, N-terminal domain	Back alignment and domain information

 Score =  548 bits (1413), Expect = 0.0
 Identities = 193/319 (60%), Positives = 247/319 (77%), Gaps = 1/319 (0%)

Query: 25  RVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQA 84
             T+ VD  + +A  DE+F+CAT+DWWP +KC+Y  CPWG +S++NLDL++P+L NAI+A
Sbjct: 3   EATVVVDGRRAIAETDENFVCATLDWWPPEKCDYGQCPWGLASLLNLDLNNPILLNAIKA 62

Query: 85  FQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRT 144
           F  L+IR+GGSLQDQV+YD GDLK PC PF K   GLFGFS+GCL M RWDELN  F +T
Sbjct: 63  FAPLKIRLGGSLQDQVIYDTGDLKTPCTPFTKNTSGLFGFSQGCLPMDRWDELNAFFQKT 122

Query: 145 RAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSI 204
            AI++FGLNAL GR+ +    WGGAWD  NA  F++YT+S GY+IDSWE GNELSG   +
Sbjct: 123 GAIITFGLNALRGRNKLPKGTWGGAWDYTNAESFIRYTVSKGYKIDSWELGNELSGSG-V 181

Query: 205 GASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGV 264
           GA V AE Y KDLI LKN++ ++Y+N   KP ++APGGFFDQ+W+ + L  +G +V++ +
Sbjct: 182 GARVSAEQYAKDLIKLKNLVKDVYQNVRPKPLVIAPGGFFDQQWFTELLDKTGPSVLDVL 241

Query: 265 THHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSG 324
           THHIYNLGPGVDP+L+ KIL+P  L   ++TF +L+Q I+ HG WA AWVGE+GGAYNSG
Sbjct: 242 THHIYNLGPGVDPHLIEKILDPSYLDGEAKTFSDLQQIIQSHGTWAVAWVGEAGGAYNSG 301

Query: 325 GRHVSNTFVNSFWYLDQLG 343
           G  VSNTF+NSFWYLDQLG
Sbjct: 302 GNLVSNTFINSFWYLDQLG 320

Family of endo-beta-N-glucuronidase, or heparanase. Heparan sulfate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulfate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular micro-environment. Heparanase degrades HS at specific intra-chain sites. The enzyme is synthesised as a latent approximately 65 kDa protein that is processed at the N-terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumour cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity. Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		543
PF03662		319	Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t	100.0
COG3534		501	AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra	100.0
PF01229		486	Glyco_hydro_39: Glycosyl hydrolases family 39; Int	99.21
PF11790		239	Glyco_hydro_cc: Glycosyl hydrolase catalytic core;	98.68
PF02055		496	Glyco_hydro_30: O-Glycosyl hydrolase family 30; In	98.43
smart00813		189	Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminu	98.37
PF00150		281	Cellulase: Cellulase (glycosyl hydrolase family 5)	98.28
PF06964		177	Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-termin	98.15
PF12891		239	Glyco_hydro_44: Glycoside hydrolase family 44; Int	98.13
PF07745		332	Glyco_hydro_53: Glycosyl hydrolase family 53; Inte	97.85
COG5520		433	O-Glycosyl hydrolase [Cell envelope biogenesis, ou	97.79
PF12876		88	Cellulase-like: Sugar-binding cellulase-like; Inte	97.6
PF14587		384	Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P	97.3
smart00633		254	Glyco_10 Glycosyl hydrolase family 10.	96.72
COG3867		403	Arabinogalactan endo-1,4-beta-galactosidase [Carbo	96.5
COG3664		428	XynB Beta-xylosidase [Carbohydrate transport and m	95.79
PRK10150		604	beta-D-glucuronidase; Provisional	94.34
PF00332		310	Glyco_hydro_17: Glycosyl hydrolases family 17; Int	91.22
PF02836		298	Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM	86.59
COG5309		305	Exo-beta-1,3-glucanase [Carbohydrate transport and	80.14

>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3	Back alignment and domain information

Probab=100.00  E-value=3.5e-83  Score=645.01  Aligned_cols=318  Identities=55%  Similarity=1.066  Sum_probs=156.1

Q ss_pred             eEEEEecCCCcccccCCCeeEEEeeccCCCCCCCCCCCCCCCcccCCCCCcHHHHHHHHHcCCceEecCCcccceeeEec
Q 009102           25 RVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDV  104 (543)
Q Consensus        25 ~~~v~i~~~~~~~~i~~~f~s~sie~wp~~~~~y~~~~w~~~s~~~~~l~~~~l~~l~k~L~p~~lRiGG~~~D~~~~~~  104 (543)
                      .++|.|+...+++++|++|+|+|+||||++||+|++|+||++|++|+||+|++|++++|+|+|.+||+||+.||+++|+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~f~catldwwp~~kc~y~~~~w~~as~~nlDL~n~~L~~a~~al~P~~iRvGGslqD~v~Y~~   81 (319)
T PF03662_consen    2 DGTVVVDGSTAIATTDENFVCATLDWWPPSKCDYGQCSWGNASILNLDLSNPILINAAKALSPLYIRVGGSLQDQVIYDT   81 (319)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccCCCCcccccccccchhhHHHHHHHHhhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHHHh
Q 009102          105 GDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTIS  184 (543)
Q Consensus       105 ~~~~~~~~p~~~~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~~  184 (543)
                      +....||.|+.++++.+|||+++||++++||++++|++++|+++|||||++.|++...++.+.|+||++||+++++|+.+
T Consensus        82 ~~~~~~c~~~~~~~~~~~~fs~~clt~~rwd~l~~F~~~tG~~liFgLNAL~g~~~~~~~~~~g~WnssNA~~Ll~Yt~s  161 (319)
T PF03662_consen   82 GDNKQPCSPFVKNASGLFGFSNGCLTMSRWDELNNFAQKTGLKLIFGLNALLGRRQLADRDWDGSWNSSNAQSLLKYTAS  161 (319)
T ss_dssp             ------------------------------HHHHHHHHHHT-EEEEEE-TTTS-HHHHHHHHHHHHHHH-TTTEEEEEES
T ss_pred             cccccccccccccccccccccccccchhHHHHHHHHHHHhCCEEEEEecccCCCCCCCCCCcCCCCChHHHHHHHHHHHH
Confidence            98888999998888999999999999999999999999999999999999998754444456789999999999999999


Q ss_pred             CCcccceeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHHHHHHHhhhCCCcccEE
Q 009102          185 MGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGV  264 (543)
Q Consensus       185 ~g~~i~~wElGNEpd~~~~~g~~~t~~~Ya~d~~~~~~~~~~~~~~~~~~~~lvgP~~~~~~~w~~~fl~~~~~~~id~v  264 (543)
                      +||+|++|||||||+++ +++++++++||++|+.+||++|+++|++..++|+++||+++++.+|+++||+++++..||+|
T Consensus       162 kgy~I~~WELGNEl~g~-g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~~g~~~vD~v  240 (319)
T PF03662_consen  162 KGYNIDSWELGNELNGS-GVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKASGPGVVDAV  240 (319)
T ss_dssp             S-GGG--------HHHH-SSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHHTTTT--SEE
T ss_pred             cCCCccccccccccCCC-CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHhcCCCccCEE
Confidence            99999999999999997 88899999999999999999999999887789999999998899999999999887569999


Q ss_pred             EEEeecCCCCCCchhhhcccChhHhhHHHHHHHHHHHHHHHhCCCCcEEEcccccccCCCCCCcchHHHHHHHHHHHhh
Q 009102          265 THHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLG  343 (543)
Q Consensus       265 s~H~Y~~~~g~d~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~~vsdtf~~alw~lD~Lg  343 (543)
                      |||+|++++|+|++++++|++|++||++..+++.+++++++++|++++|||||+++|++|+++|||||+++|||||+||
T Consensus       241 T~H~Y~lg~g~d~~l~~~~l~p~~Ld~~~~~~~~~~~~v~~~~p~~~~WlGEtg~Ay~gG~~~vSdtFv~~FwwLDqLG  319 (319)
T PF03662_consen  241 TWHHYNLGSGRDPALIEDFLNPSYLDTLADTFQKLQQVVQEYGPGKPVWLGETGSAYNGGAPGVSDTFVAGFWWLDQLG  319 (319)
T ss_dssp             EEEEEEE--TT-TT-HHHHTS--HHHHHHHHHHHHH-----HHH---EEEEEEEEESTT--TTTTTSTHHHHHHHHHH-
T ss_pred             EEEecCCCCCchHHHHHHhcChhhhhHHHHHHHHHhhhhcccCCCCCeEEeCcccccCCCCCCccHHHHHHHHHHHhhC
Confidence            9999999888888889999999999999999999999999999999999999999999999999999999999999997

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.

>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins	Back alignment and domain information

>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3	Back alignment and domain information

>smart00813 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus	Back alignment and domain information

>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3	Back alignment and domain information

>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases	Back alignment and domain information

>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B	Back alignment and domain information

>smart00633 Glyco_10 Glycosyl hydrolase family 10	Back alignment and domain information

>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10150 beta-D-glucuronidase; Provisional	Back alignment and domain information

>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		543
3vny_A		488	Crystal Structure Of Beta-Glucuronidase From Acidob		1e-04

>pdb|3VNY|A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum Length = 488

Back alignment and structure

Iteration: 1

Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 34/283 (12%) Query: 168 GAWDSNNARDFLKYTISM--GYQIDSWEYGNE--LSGRTSI-GASVDAELYGKDLINLKN 222 G NA D Y + ++ +++ GNE L R I AS D Y D Sbjct: 142 GKGTPENAADEAAYVMETIGADRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQRFFT 201 Query: 223 IINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNL-VS 281 I + N+ P ++ +W F +V ++ H Y GP DP++ + Sbjct: 202 AIRKRVPNAP----FAGPDTAYNTKWLVPFADKFKHDV-KFISSHYYAEGPPTDPSMTIE 256 Query: 282 KILNPQ-RLSRVSETFGNLKQTIEKHG-PWASAWVGESGGAYNSGGRHVSNTFVNSFWYL 339 +++ P RL + ET G LKQ G P+ + E+ Y G + VS+TF + W Sbjct: 257 RLMKPNPRL--LGETAG-LKQVEADTGLPFR---LTETNSCYQGGKQGVSDTFAAALWAG 310 Query: 340 DQLGMSSKYNTKVYCRQTLVGGNYGLLNATT------FIPNPDYYSALLWHRLMGKGVLS 393 D + + + GG YG FI P+YY LL+ + G G L Sbjct: 311 DLMYQQAAAGS---TGINFHGGGYGWYTPVAGTPEDGFIARPEYYGMLLFAQ-AGAGQLL 366 Query: 394 VA--TDGSSS--LRSYA-HCSKEREGITLLLINLSNQTDYVIS 431 A TD S++ L +YA + R I L NL + IS Sbjct: 367 GAKLTDNSAAPLLTAYALRGTDGRTRIALFNKNLDADVEVAIS 409

PyMOL of 3vny

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		543
3vny_A		488	Beta-glucuronidase; TIM barrel, greek-KEY, glycosi	4e-64
3ug3_A		504	Alpha-L-arabinofuranosidase; TIM barrel, hydrolase	5e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Length = 488	Back alignment and structure

 Score =  216 bits (550), Expect = 4e-64
 Identities = 86/483 (17%), Positives = 160/483 (33%), Gaps = 63/483 (13%)

Query: 26  VTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAF 85
           V + VDA+    T    +    + +      N N+             ++  LA  ++  
Sbjct: 22  VGLSVDASALGHTIPPDY--TGLSYEQAQMANPNY----------FSGANTQLAGFLRTL 69

Query: 86  QS-LRIRIGGSLQDQVLYDVGDLKAPCHPFRKMK--DGLFGFSKGCLHMQRWDELNQLFN 142
                +RIGG+  +   ++                  G    ++  +  +  + L++  +
Sbjct: 70  GRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLD 129

Query: 143 RTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTIS--MGYQIDSWEYGNELSG 200
           +T   + +GLN              G     NA D   Y +      ++ +++ GNE   
Sbjct: 130 KTGWKLIYGLNL-------------GKGTPENAADEAAYVMETIGADRLLAFQLGNEPDL 176

Query: 201 RTSIG---ASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSG 257
               G   AS D   Y  D       I +   N         P   ++ +W   F     
Sbjct: 177 FYRNGIRPASYDFAAYAGDWQRFFTAIRKRVPN----APFAGPDTAYNTKWLVPFADKFK 232

Query: 258 SNVVNGVTHHIYNLGPGVDPNL-VSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGE 316
            +V   ++ H Y  GP  DP++ + +++ P    R+      LKQ     G      + E
Sbjct: 233 HDV-KFISSHYYAEGPPTDPSMTIERLMKPN--PRLLGETAGLKQVEADTGLPF--RLTE 287

Query: 317 SGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATT------ 370
           +   Y  G + VS+TF  + W  D +   +   +         GG YG            
Sbjct: 288 TNSCYQGGKQGVSDTFAAALWAGDLMYQQAAAGS---TGINFHGGGYGWYTPVAGTPEDG 344

Query: 371 FIPNPDYYSALLWHRLMGKGVLSVATD---GSSSLRSYAHCSKEREGITLLLINLSNQTD 427
           FI  P+YY  LL+ +     +L         +  L +YA    +     + L N +   D
Sbjct: 345 FIARPEYYGMLLFAQAGAGQLLGAKLTDNSAAPLLTAYALRGTDG-RTRIALFNKNLDAD 403

Query: 428 YVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGST--ASDGHLTREEYHLTPKDG 485
             +++    +   TV   +         D    V++ G+   AS       + ++    G
Sbjct: 404 VEVAISGVASPSGTVLRLEAPR-----ADDTTDVTFGGAPVGASGSWSPLVQEYVPGHSG 458

Query: 486 YLQ 488
              
Sbjct: 459 QFV 461

PyMOL of 3vny

>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Length = 504	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		543
3vny_A		488	Beta-glucuronidase; TIM barrel, greek-KEY, glycosi	100.0
1qw9_A		502	Arabinosidase, alpha-L-arabinofuranosidase; hydrol	100.0
2c7f_A		513	Alpha-L-arabinofuranosidase; glycosidase, xylan, a	100.0
2y2w_A		574	Arabinofuranosidase; hydrolase, arabinoxylan, glyc	100.0
2vrq_A		496	Alpha-L-arabinofuranosidase; hydrolase, glycosidas	100.0
3ug3_A		504	Alpha-L-arabinofuranosidase; TIM barrel, hydrolase	100.0
2yih_A		524	CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca	100.0
2e4t_A		519	Endoglucanase, xyloglucanase; TIM barrel, TIM-like	100.0
3ii1_A		535	Cellulase; CELM2, glucanase-xyanase, glucanase, xy	99.96
3ik2_A		517	Endoglucanase A; TIM-like barrel, hydrolase; 2.20A	99.94
1w91_A		503	Beta-xylosidase; MAD, seMet, tetramer, hydrolase;	99.91
4ekj_A		500	Beta-xylosidase; TIM-barrel fold, hemicellulase, h	99.89
1uhv_A		500	Beta-xylosidase; family 39 glycoside hydrolase, xy	99.83
3clw_A		507	Conserved exported protein; structural genomics, u	99.21
2y24_A		383	Xylanase; hydrolase, GH5 family, aldotetraouronic	99.2
2wnw_A		447	Activated by transcription factor SSRB; hydrolase,	99.07
2nt0_A		497	Glucosylceramidase; cerezyme, glucocerebrosidase,	99.02
3kl0_A		401	Glucuronoxylanase XYNC; alpha beta barrel, (beta/a	98.9
1ur4_A		399	Galactanase; hydrolase, beta-1, glycoside hydrolas	98.75
1fob_A		334	Beta-1,4-galactanase; B/A barrel, glycosyl hydrola	98.69
4aw7_A		591	GH86A beta-porphyranase; hydrolase, porphyran-hexa	98.53
1hjs_A		332	Beta-1,4-galactanase; 4-galactanases, family 53 gl	98.44
3aof_A		317	Endoglucanase; glycosyl hydrolase family 5, cellul	98.37
3nco_A		320	Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1	98.33
3pzg_A		383	Mannan endo-1,4-beta-mannosidase. glycosyl hydrol	98.3
1qnr_A		344	Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt	98.16
3jug_A		345	Beta-mannanase; TIM-barrel, glycosidase, hydrolase	98.09
3pzt_A		327	Endoglucanase; alpha/beta barrel, glycosyl hydrola	98.07
3zr5_A		656	Galactocerebrosidase; hydrolase, GALC, glycosyl hy	98.07
1rh9_A		373	Endo-beta-mannanase; endo-beta-mannase, retaining,	98.04
1uuq_A		440	Mannosyl-oligosaccharide glucosidase; hydrolase, m	97.93
1ece_A		358	Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.	97.88
3qho_A		458	Endoglucanase, 458AA long hypothetical endo-1,4-be	97.87
4hty_A		359	Cellulase; (alpha/beta)8 barrel, family 5 endogluc	97.87
2jep_A		395	Xyloglucanase; family 5, plant cell WALL, hydrolas	97.86
1ceo_A		343	Cellulase CELC; glycosyl hydrolase, family A/5 of	97.85
1bqc_A		302	Protein (beta-mannanase); glycosyl hydrolase, fami	97.84
3ndz_A		345	Endoglucanase D; cellotriose, xylanase, carbohydra	97.81
2whl_A		294	Beta-mannanase, baman5; glycoside hydrolase, hydro	97.81
3icg_A		515	Endoglucanase D; cellulase, xylanase, carbohydrate	97.78
4awe_A		387	Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana	97.66
1egz_A		291	Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL	97.66
1wky_A		464	Endo-beta-1,4-mannanase; TIM barrel, catalytic dom	97.66
1tvn_A		293	Cellulase, endoglucanase G; glycoside hydrolase, C	97.63
7a3h_A		303	Endoglucanase; hydrolase, cellulose degradation, g	97.62
1vjz_A		341	Endoglucanase; TM1752, structural genomics, JCSG,	97.55
2cks_A		306	Endoglucanase E-5; carbohydrate metabolism, polysa	97.54
3ayr_A		376	Endoglucanase; TIM barrel, hydrolase, carbohydrate	97.53
3hn3_A		613	Beta-G1, beta-glucuronidase; lysosomal enzyme, aci	97.44
1nq6_A		302	XYS1; glycoside hydrolase family 10, xylanase, xyl	97.43
3civ_A		343	Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.	97.35
1edg_A		380	Endoglucanase A; family A, cellulases, xylanases,	97.3
1h1n_A		305	Endo type cellulase ENGI; hydrolase, glycosyl hydr	97.27
3vup_A		351	Beta-1,4-mannanase; TIM barrel, digestive fluid, H	97.19
3l55_A		353	B-1,4-endoglucanase/cellulase; putative beta-1,4-e	97.19
1h4p_A		408	Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca	97.02
3cui_A		315	EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine	97.01
3n9k_A		399	Glucan 1,3-beta-glucosidase; aromatic entranceway/	97.0
2osx_A		481	Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel	96.98
2w61_A		555	GAS2P, glycolipid-anchored surface protein 2; glyc	96.98
1g01_A		364	Endoglucanase; alpha/beta barrel, TIM barrel, hydr	96.95
3qr3_A		340	Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A	96.81
2y8k_A		491	Arabinoxylanase, carbohydrate binding family 6; hy	96.79
1n82_A		331	Xylanase, intra-cellular xylanase; hydrolase; 1.45	96.73
3em5_A		316	Beta-1,3-glucanase; glycoprotein, rossmann fold, (	96.71
3fn9_A		692	Putative beta-galactosidase; structural genomics,	96.49
3ur8_A		323	Glucan endo-1,3-beta-D-glucosidase; glucoside hydr	96.35
2c0h_A		353	Mannan endo-1,4-beta-mannosidase; hydrolase, signa	96.19
1xyz_A		347	1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola	96.16
1v0l_A		313	Endo-1,4-beta-xylanase A; glycoside hydrolase fami	96.1
1ur1_A		378	Endoxylanase; hydrolase, family 10, glycoside hydr	96.03
2dep_A		356	Xylanase B, thermostable celloxylanase; glycosidas	95.99
3lpf_A		605	Beta-glucuronidase; alpha/beta barrel, sugar-bindi	95.9
3cmg_A		667	Putative beta-galactosidase; structural genomics,	95.9
1i1w_A		303	Endo-1,4-beta-xylanase; xylan degradation, hydrola	95.66
1ta3_B		303	Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I),	95.5
1ghs_A		306	1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg	95.14
3niy_A		341	Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5	94.87
2uwf_A		356	Endoxylanase, alkaline active endoxylanase; hydrol	94.82
3u7b_A		327	Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET	94.62
1aq0_A		306	1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl	94.52
2cyg_A		312	Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be	94.36
1kwg_A		645	Beta-galactosidase; TIM barrel, glycoside hydrolas	94.36
3gm8_A		801	Glycoside hydrolase family 2, candidate beta-GLYC;	93.89
2d1z_A		436	Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en	93.38
1r85_A		379	Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A	92.97
1w32_A		348	Endo-1,4-beta-xylanase A precursor; mutant, calciu	92.79
2v3g_A		283	Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich	91.78
4f8x_A		335	Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET	91.19
1yq2_A		1024	Beta-galactosidase; glycosyl hydrolase family 2, T	90.33
3emz_A		331	Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba	90.22
2vx5_A		396	Cellvibrio japonicus mannanase cjman26C; hydrolase	88.43
3tp4_A		475	Computational design of enzyme; structural genomic	87.53
1odz_A		386	Mannanase A; hydrolase, family 26, glycoside-hydro	86.11
1us2_A		530	Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca	85.7
4h41_A		340	Putative alpha-L-fucosidase; hydrolase, carbohydra	85.38
2je8_A		848	Beta-mannosidase; glycoside hydrolase, hydrolase;	81.36
2ddx_A		333	Beta-1,3-xylanase; glycoside hydrolase, TIM barrel	81.16
3oba_A		1032	Beta-galactosidase; TIM barrel, tetramer, GH2, gly	80.83

>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A*	Back alignment and structure

Probab=100.00  E-value=1.8e-70  Score=593.93  Aligned_cols=445  Identities=19%  Similarity=0.225  Sum_probs=355.7

Q ss_pred             ccCcceEEEEecCCCcccccCCCeeEEEeeccCCCCCCCCCCCCCCCcccC---CCCCcHHHHHHHHHcCC-ceEecCCc
Q 009102           20 ARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVIN---LDLSHPLLANAIQAFQS-LRIRIGGS   95 (543)
Q Consensus        20 ~~~~~~~~v~i~~~~~~~~i~~~f~s~sie~wp~~~~~y~~~~w~~~s~~~---~~l~~~~l~~l~k~L~p-~~lRiGG~   95 (543)
                      ...+.+++|+|++++++++||++|+|+++|.               +.+.+   +++++++|++++|+|+| ++||+|||
T Consensus        16 ~~~~~~~~v~v~~~~~~~~v~~~f~g~~~e~---------------s~i~~~~~~~~~~~~v~~l~k~L~~~~~lR~GG~   80 (488)
T 3vny_A           16 TSSPVRVGLSVDASALGHTIPPDYTGLSYEQ---------------AQMANPNYFSGANTQLAGFLRTLGRQGVLRIGGN   80 (488)
T ss_dssp             --CCEEEEEEEEEEEEEEEECTTCCEEEEEG---------------GGGGCTTTSSTTCHHHHHHHHHHCSSCEEEEESG
T ss_pred             cCCCCcEEEEEcCCCCCCccCccceEeeeeH---------------hhccCccccCcCCHHHHHHHHHhCCCeEEEeCcc
Confidence            3567889999999999999999999999992               23333   46778999999999999 99999999


Q ss_pred             ccceeeEecCCCCCCCCCcc-cCCCCcc-cccccccchhhHHHHHHHHhhcCCEEEEEeecCCCCccccCCCCCCCCChH
Q 009102           96 LQDQVLYDVGDLKAPCHPFR-KMKDGLF-GFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSN  173 (543)
Q Consensus        96 ~~D~~~~~~~~~~~~~~p~~-~~~~~~~-g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~  173 (543)
                      ++|.++|+++.++...+|.. .+....+ ..+++|+++.+||+|++||+++|+++||+||++.+             +++
T Consensus        81 ~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~lN~g~~-------------~~~  147 (488)
T 3vny_A           81 TSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGLNLGKG-------------TPE  147 (488)
T ss_dssp             GGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEECTTTS-------------CHH
T ss_pred             ccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEEeCCCC-------------CHH
Confidence            99999999986543334421 0111000 01257999999999999999999999999998654             589


Q ss_pred             HHHHHHHHHHh--CCcccceeeeeccCCCCC--C-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCCCCHHH
Q 009102          174 NARDFLKYTIS--MGYQIDSWEYGNELSGRT--S-IGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEW  248 (543)
Q Consensus       174 ~A~~~l~y~~~--~g~~i~~wElGNEpd~~~--~-~g~~~t~~~Ya~d~~~~~~~~~~~~~~~~~~~~lvgP~~~~~~~w  248 (543)
                      +|++|++||..  ++++|++||||||||+++  + .+.+|++++|+++|++++++|++++|+    ++++||+...+..|
T Consensus       148 ~a~~~v~y~~~~~~~~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~~~a~a~k~~~p~----~~l~gp~~~~~~~w  223 (488)
T 3vny_A          148 NAADEAAYVMETIGADRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQRFFTAIRKRVPN----APFAGPDTAYNTKW  223 (488)
T ss_dssp             HHHHHHHHHHHHHCTTTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHHHHHHHHHHHCTT----CCEEEEEESSCGGG
T ss_pred             HHHHHHHHHhhcccCCceeEEEecCcccccccCCccCCCCCHHHHHHHHHHHHHHHHhhCCC----CeEEeCCCCCCchh
Confidence            99999999986  999999999999999874  2 356899999999999999999998875    47999997767899


Q ss_pred             HHHHHhhhCCCcccEEEEEeecCCCCCCc-hhhhcccChhH-hhHHHHHHHHHHHHHHHhCCCCcEEEcccccccCCCCC
Q 009102          249 YAKFLQVSGSNVVNGVTHHIYNLGPGVDP-NLVSKILNPQR-LSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGR  326 (543)
Q Consensus       249 ~~~fl~~~~~~~id~vs~H~Y~~~~g~d~-~~~~~~l~~~~-l~~~~~~~~~~~~~~~~~~~~~~~wl~Et~sa~~~G~~  326 (543)
                      +++||+..+. .||++|+|+|+.+++.++ .+++++|+++. |+++.   +.+++++++  +++|+||||+|+++|+|.+
T Consensus       224 ~~~~l~~~~~-~vd~vS~H~Y~~g~~~~~~~t~~~ll~~~~~l~~~~---~~~~~~~~~--~g~p~~lgEtnsa~~~G~~  297 (488)
T 3vny_A          224 LVPFADKFKH-DVKFISSHYYAEGPPTDPSMTIERLMKPNPRLLGET---AGLKQVEAD--TGLPFRLTETNSCYQGGKQ  297 (488)
T ss_dssp             HHHHHHHTGG-GCSEEEEEEEEECCTTCTTCCHHHHTSCCHHHHHHH---HHHHHHHHH--HCCCEEEEEEEEESTTCCT
T ss_pred             hHHHHHhcCc-cCCEEEEeeCCCCCCCCCCcCHHHHcCchHHHHHHH---HHHHHHHhc--CCCCEEEeccccCCCCCCC
Confidence            9999988776 599999999998655443 35778999863 54433   334444443  4789999999999999999


Q ss_pred             CcchHHHHHHHHHHHhhhhhccCCeEEEeeeccCcccccccCCC---CCcCcchhHHHHHHHhcCCceeEeecC-CCCee
Q 009102          327 HVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNYGLLNATT---FIPNPDYYSALLWHRLMGKGVLSVATD-GSSSL  402 (543)
Q Consensus       327 ~vsdtf~~alw~lD~Lg~aA~~g~~vv~~qtl~Gg~Y~l~~~~~---~~p~P~Yy~~lL~~~l~G~~vl~~~~~-~~~~l  402 (543)
                      ++||+|++|||++|+++++|+.|++++++|.++|++|++++.++   +.|+|+||+++||+++||.+++.+++. ..+..
T Consensus       298 ~vs~tf~aalw~~D~~~~~a~~g~~~v~~h~g~g~~y~~l~~~~~~g~~~~P~Yy~~~l~~~~~G~~vl~~~~~~~~~~~  377 (488)
T 3vny_A          298 GVSDTFAAALWAGDLMYQQAAAGSTGINFHGGGYGWYTPVAGTPEDGFIARPEYYGMLLFAQAGAGQLLGAKLTDNSAAP  377 (488)
T ss_dssp             TTTTSTHHHHHHHHHHHHHHHHTCCCEEEECCTTCTTCSEEEETTTEEEECHHHHHHHHHHHHCSEEEEEEEEESCTTST
T ss_pred             CcCHHHHHHHHHHHHHHHHHHcCCcEEEEEcccCCCcceeecCCCcccccCCcHHHHHHHHHHcCCceEeEeeccCCCCc
Confidence            99999999999999999999999999888888899999998763   789999999999999999999988863 34555


Q ss_pred             EEEEEEecC-CCCEEEEEEeCCCCCceEEEEEeccccceeccccccCCCCcccccccccccccCCccCCCCceeEEEEee
Q 009102          403 RSYAHCSKE-REGITLLLINLSNQTDYVISVHNSMNMKLTVKGKDINGESSLSRDIKRAVSWVGSTASDGHLTREEYHLT  481 (543)
Q Consensus       403 ~~YA~c~~~-~g~vtv~lIN~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~Lt  481 (543)
                      ++||||..+ ++.++|+|||++.++.+  +|++.|.                                 ..+.+..+.|+
T Consensus       378 ~~~ayA~~~~~~~~~vlliN~~~~~~~--~v~l~G~---------------------------------~~~~~~v~rLt  422 (488)
T 3vny_A          378 LLTAYALRGTDGRTRIALFNKNLDADV--EVAISGV---------------------------------ASPSGTVLRLE  422 (488)
T ss_dssp             TEEEEEEEETTSCEEEEEEECCSSCCE--EEEEESC---------------------------------CCSEEEEEEEE
T ss_pred             cEEEEEEEcCCCcEEEEEEECCCCccE--EEEecCC---------------------------------CCceEEEEEEE
Confidence            555555542 47899999999998754  4444442                                 12367789999


Q ss_pred             cCCCCcccceEEECCcccccCCCCCCCCCCceecCCC-CceEEccceEEEEEecCCcc
Q 009102          482 PKDGYLQSQTMVLNGIPLQLAEDEGIPKLDPVRVDVN-SPIYITHLSIAFIVFPNFSA  538 (543)
Q Consensus       482 ~~~~~l~s~~v~LNG~~l~~~~~g~~p~l~p~~~~~~-~~i~lpp~S~~F~vi~~~~~  538 (543)
                      +++.+.. ..|++||++++.+.++.+|.-+.+.+..+ ..++|||.|++.+.|+...+
T Consensus       423 a~~~~a~-~~it~~G~s~~~~~~~~~~~~~~~~v~~g~~~v~v~a~sa~lv~f~~~~~  479 (488)
T 3vny_A          423 APRADDT-TDVTFGGAPVGASGSWSPLVQEYVPGHSGQFVLHMRKASGALLEFAKLAA  479 (488)
T ss_dssp             CSSTTCS-SCCEETTBCCCGGGCCCCSCCEEEECBTTBEEEEECSSEEEEEEECCTTC
T ss_pred             CCCcccc-cCceECCEEecCCCceeecCeEEEEecCCeEEEEEcCCeEEEEEehhhhh
Confidence            9865444 47999999998655666566555555443 46999999999999976544

PyMOL of 3vny

>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A	Back alignment and structure

>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A	Back alignment and structure

>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum}	Back alignment and structure

>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A	Back alignment and structure

>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A	Back alignment and structure

>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A*	Back alignment and structure

>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A*	Back alignment and structure

>3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A	Back alignment and structure

>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum}	Back alignment and structure

>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A*	Back alignment and structure

>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}	Back alignment and structure

>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A	Back alignment and structure

>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis}	Back alignment and structure

>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A*	Back alignment and structure

>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}	Back alignment and structure

>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ...	Back alignment and structure

>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A*	Back alignment and structure

>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*	Back alignment and structure

>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A	Back alignment and structure

>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}	Back alignment and structure

>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*	Back alignment and structure

>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*	Back alignment and structure

>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*	Back alignment and structure

>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*	Back alignment and structure

>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*	Back alignment and structure

>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}	Back alignment and structure

>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A	Back alignment and structure

>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*	Back alignment and structure

>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3	Back alignment and structure

>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*	Back alignment and structure

>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A	Back alignment and structure

>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*	Back alignment and structure

>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*	Back alignment and structure

>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*	Back alignment and structure

>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A	Back alignment and structure

>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*	Back alignment and structure

>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*	Back alignment and structure

>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A	Back alignment and structure

>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}	Back alignment and structure

>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3	Back alignment and structure

>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3	Back alignment and structure

>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*	Back alignment and structure

>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A	Back alignment and structure

>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3	Back alignment and structure

>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*	Back alignment and structure

>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*	Back alignment and structure

>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*	Back alignment and structure

>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3	Back alignment and structure

>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}	Back alignment and structure

>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3	Back alignment and structure

>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A	Back alignment and structure

>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}	Back alignment and structure

>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3	Back alignment and structure

>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*	Back alignment and structure

>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A	Back alignment and structure

>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*	Back alignment and structure

>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*	Back alignment and structure

>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*	Back alignment and structure

>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}	Back alignment and structure

>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}	Back alignment and structure

>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A	Back alignment and structure

>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*	Back alignment and structure

>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}	Back alignment and structure

>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A	Back alignment and structure

>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3	Back alignment and structure

>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3	Back alignment and structure

>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A	Back alignment and structure

>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*	Back alignment and structure

>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}	Back alignment and structure

>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A	Back alignment and structure

>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}	Back alignment and structure

>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A	Back alignment and structure

>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3	Back alignment and structure

>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3	Back alignment and structure

>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A	Back alignment and structure

>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*	Back alignment and structure

>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}	Back alignment and structure

>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A	Back alignment and structure

>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3	Back alignment and structure

>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*	Back alignment and structure

>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}	Back alignment and structure

>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A	Back alignment and structure

>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A	Back alignment and structure

>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A	Back alignment and structure

>2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A*	Back alignment and structure

>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}	Back alignment and structure

>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3	Back alignment and structure

>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*	Back alignment and structure

>2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A*	Back alignment and structure

>3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A	Back alignment and structure

>1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A*	Back alignment and structure

>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A	Back alignment and structure

>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}	Back alignment and structure

>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*	Back alignment and structure

>2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP}	Back alignment and structure

>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		543
d1qw9a2		367	Alpha-L-arabinofuranosidase, catalytic domain {Bac	100.0
d1uhva2		346	Beta-D-xylosidase, catalytic domain {Thermoanaerob	99.75
d1ur4a_		387	Beta-1,4-galactanase {Bacillus licheniformis [TaxI	98.84
d1foba_		334	Beta-1,4-galactanase {Fungus (Aspergillus aculeatu	98.71
d1xyza_		320	Xylanase {Clostridium thermocellum, XynZ [TaxId: 1	98.6
d1hjsa_		332	Beta-1,4-galactanase {Thielavia heterothallica, ak	98.47
d1vbua1		324	Xylanase {Thermotoga maritima [TaxId: 2336]}	98.41
d1uuqa_		410	Exomannosidase {Cellvibrio mixtus [TaxId: 39650]}	98.31
d1ceoa_		340	Endoglucanase CelC {Clostridium thermocellum [TaxI	98.19
d1nq6a_		302	Xylanase A, catalytic core {Streptomyces halstedii	98.1
d1ecea_		358	Endocellulase E1 {Acidothermus cellulolyticus [Tax	98.03
d1fh9a_		312	Xylanase A, catalytic core {Cellulomonas fimi [Tax	98.03
d1rh9a1		370	Beta-mannanase {Tomato (Lycopersicon esculentum) [	97.98
d1egza_		291	Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId:	97.91
d1nofa2		277	Glycosyl hydrolase family 5 xylanase, catalytic do	97.87
d1qnra_		344	Beta-mannanase {Trichoderma reesei [TaxId: 51453]}	97.87
d1n82a_		330	Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId	97.86
d1vjza_		325	Endoglucanase homologue TM1752 {Thermotoga maritim	97.85
d1tvna1		293	Endoglucanase Cel5a {Pseudoalteromonas haloplankti	97.83
d1wkya2		297	Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449	97.78
d7a3ha_		300	Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId	97.78
d1qw9a1		130	Alpha-l-arabinofuranosidase {Bacillus stearothermo	97.72
d1bqca_		302	Beta-mannanase {Thermomonospora fusca [TaxId: 2021	97.69
d1v0la_		302	Xylanase A, catalytic core {Streptomyces lividans	97.65
d1edga_		380	Endoglucanase CelA {Clostridium cellulolyticum [Ta	97.46
d1g01a_		357	Alkaline cellulase K catalytic domain {Bacillus sp	97.45
d1h1na_		305	Endocellulase EngI {Thermoascus aurantiacus [TaxId	97.44
d2c7fa1		131	Alpha-l-arabinofuranosidase {Clostridium thermocel	97.32
d1bhga3		304	beta-Glucuronidase, domain 3 {Human (Homo sapiens)	97.25
d2nt0a2		354	Glucosylceramidase, catalytic domain {Human (Homo	97.11
d1us3a2		364	Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]	97.09
d1ta3b_		301	Xylanase A, catalytic core {Emericella nidulans (A	96.9
d2c0ha1		350	endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed	96.63
d1ghsa_		306	Plant beta-glucanases {Barley (Hordeum vulgare), 1	96.54
d2pb1a1		394	Exo-beta-(1,3)-glucanase {Yeast (Candida albicans)	95.82
d2v3ga1		273	Endoglucanase H N-terminal domain {Clostridium the	95.65
d1i1wa_		303	Xylanase A, catalytic core {Thermoascus aurantiacu	95.59
d1h4pa_		408	Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom	95.31
d1r85a_		371	Xylanase {Bacillus stearothermophilus, Xt6 [TaxId:	95.24
d2cyga1		312	Plant beta-glucanases {Banana (Musa acuminata), 1,	94.93
d1aq0a_		306	Plant beta-glucanases {Barley (Hordeum vulgare), 1	94.32
d1w32a_		346	Xylanase A, catalytic core {Pseudomonas fluorescen	93.36
d1tg7a5		354	Beta-galactosidase LacA, N-terminal domain {Penici	89.76
d1nofa1		106	Glycosyl hydrolase family 5 xylanase {Erwinia chry	89.73
d2je8a5		348	Five-domain beta-mannosidase, domain 3 {Bacteroide	85.76
d1odza_		381	Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr	85.63
d2bvya2		366	Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]	84.74
d2vzsa5		339	Exochitosanase CsxA {Amycolatopsis orientalis [Tax	84.2
d1jz8a5		292	beta-Galactosidase, domain 3 {Escherichia coli [Ta	81.48

>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Alpha-L-arabinofuranosidase, catalytic domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=5.3e-34  Score=293.91  Aligned_cols=314  Identities=16%  Similarity=0.131  Sum_probs=221.3

Q ss_pred             ccCCCeeEEEeeccCCCCCCCCCCCCCCCcccCCCCCcHHHHHHHHHcCCceEec-CCcccceeeEecCCCCCCCCCccc
Q 009102           38 TNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRI-GGSLQDQVLYDVGDLKAPCHPFRK  116 (543)
Q Consensus        38 ~i~~~f~s~sie~wp~~~~~y~~~~w~~~s~~~~~l~~~~l~~l~k~L~p~~lRi-GG~~~D~~~~~~~~~~~~~~p~~~  116 (543)
                      .|+|+.+|.++|  +.++|+|++++-++++++|.+-.+++|++++|.|+|++||+ |||.+|.++|.++.++...+|...
T Consensus         1 ~i~~~i~g~f~E--~lg~~i~~g~~~~~~~~~~~~G~R~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~   78 (367)
T d1qw9a2           1 EIDKRIYGSFIE--HLGRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRL   78 (367)
T ss_dssp             ECCGGGGEEECC--SSTTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEE
T ss_pred             CCChhhccchhh--hccCcccCceeCCCCCCCCCcccHHHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCcc
Confidence            489999999999  68999999998888899888866999999999999999998 999999999998866544455321


Q ss_pred             ------CCCCcccccccccchhhHHHHHHHHhhcCCEEEEEeecCCCCccccCCCCCCCCChHHHHHHHHHHH-------
Q 009102          117 ------MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI-------  183 (543)
Q Consensus       117 ------~~~~~~g~~~~~lt~~~wd~~~~f~~~~G~~~i~glN~~~~~~~~~~~~~~~~W~~~~A~~~l~y~~-------  183 (543)
                            .+++.||+          +||++||+.+|+++++++|++.+             .+++|++||+||+       
T Consensus        79 ~~~w~~~~~~~~G~----------~Ef~~~~~~~gaep~~~vn~g~~-------------~~~~a~d~vey~n~~~~t~~  135 (367)
T d1qw9a2          79 DLAWKSVETNEIGL----------NEFMDWAKMVGAEVNMAVNLGTR-------------GIDAARNLVEYCNHPSGSYY  135 (367)
T ss_dssp             ETTTTEEECCSSCH----------HHHHHHHHHHTCEEEEEECCSSC-------------CHHHHHHHHHHHHCCSSSHH
T ss_pred             CCCCCCcCcCCCCH----------HHHHHHHHHhCCeEEEEEeCCCc-------------cHHHHHHHHHHHccCCCCHH
Confidence                  13344555          99999999999999999999875             3789999999985       


Q ss_pred             ---------hCCcccceeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCeEEccCCC-----CCHHHH
Q 009102          184 ---------SMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGF-----FDQEWY  249 (543)
Q Consensus       184 ---------~~g~~i~~wElGNEpd~~~~~g~~~t~~~Ya~d~~~~~~~~~~~~~~~~~~~~lvgP~~~-----~~~~w~  249 (543)
                               .++++|++||||||+++.++.|. .++++|++.+++|+++||+++|+    +++++++..     ....|.
T Consensus       136 ~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~-~~~~~Y~~~~~~f~~amk~~dP~----i~lia~g~~~~~~~~~~~w~  210 (367)
T d1qw9a2         136 SDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGH-KTAVEYGRIACEAAKVMKWVDPT----IELVVCGSSNRNMPTFAEWE  210 (367)
T ss_dssp             HHHHHHTTCCSCCCCCEEEESSCCCSTTSTTC-CCHHHHHHHHHHHHHHHHHHCTT----CEEEECCCSCTTSTTTTHHH
T ss_pred             HHHHHHcCCCCCCCceEEEeccccccccccCC-CCHHHHHHHHHHHHHHHhhcCCC----eeEEEEeCCCCCCcccchHH
Confidence                     23578999999999998766664 79999999999999999999886    577766543     234799


Q ss_pred             HHHHhhhCCCcccEEEEEeecCCCCCCchhhhcccC-hhHhhHHHHHHHHHHHHHH-H--hCCCCcEEEcccccccCC--
Q 009102          250 AKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILN-PQRLSRVSETFGNLKQTIE-K--HGPWASAWVGESGGAYNS--  323 (543)
Q Consensus       250 ~~fl~~~~~~~id~vs~H~Y~~~~g~d~~~~~~~l~-~~~l~~~~~~~~~~~~~~~-~--~~~~~~~wl~Et~sa~~~--  323 (543)
                      +.+++..+. .+|++|.|+|+.+...+..   ..+. ...++..++.+..+...++ .  ..++.++.++|+|..+..  
T Consensus       211 ~~vl~~~~~-~iD~is~H~Y~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy~~~~  286 (367)
T d1qw9a2         211 ATVLDHTYD-HVDYISLHQYYGNRDNDTA---NYLALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWYHSNE  286 (367)
T ss_dssp             HHHHHHHGG-GCSEEEEEEEECCTTCCHH---HHTTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECCTTHH
T ss_pred             HHHHhhccc-cCCcccccCCCCCCccchh---hhhhhHHHHHHHHHHHHHHHHHHHhhccCCCCceEEeecccccccccc
Confidence            999998887 4999999999865332221   1111 1123333333322222222 2  345677899999976531  


Q ss_pred             ------------CCCCcchHHHHHHHHHHHhhhhhccCCeEEE---eeeccCcccc-c-ccCC-CCCcCcchhHHHHHHH
Q 009102          324 ------------GGRHVSNTFVNSFWYLDQLGMSSKYNTKVYC---RQTLVGGNYG-L-LNAT-TFIPNPDYYSALLWHR  385 (543)
Q Consensus       324 ------------G~~~vsdtf~~alw~lD~Lg~aA~~g~~vv~---~qtl~Gg~Y~-l-~~~~-~~~p~P~Yy~~lL~~~  385 (543)
                                  +.-.-.+++.+||..+..|...-+++-.|.|   -|. +. -.+ + ++.+ ....+|.||++.|+++
T Consensus       287 ~~~~~~~~~~~~~~l~~~~tl~~AL~~A~~L~~~~R~sD~V~mA~~A~l-vN-vl~~i~~~~~~~~~~~~~y~v~~~~s~  364 (367)
T d1qw9a2         287 ADKLIEPWTVAPPLLEDIYNFEDALLVGCMLITLMKHADRVKIACLAQL-VN-VIAPIMTEKNGPAWKQTIYYPFMHASV  364 (367)
T ss_dssp             HHTTCCTTBSSCCTTCCCCBHHHHHHHHHHHHHHHHTTTTEEEEEEECS-BS-SSCSEEECTTSCEEECTTHHHHHHHHH
T ss_pred             ccccccccccCcccccccCcHHHHHHHHHHHHHHHHccCeeeeeehhHh-hh-hhcceEecCCCCeeeCcchHHHHHHHH
Confidence                        1111123444555544455444444422222   132 21 011 1 2222 3457899999999998


Q ss_pred             hc
Q 009102          386 LM  387 (543)
Q Consensus       386 l~  387 (543)
                      ++
T Consensus       365 ~~  366 (367)
T d1qw9a2         365 YG  366 (367)
T ss_dssp             HC
T ss_pred             hc
Confidence            74

PyMOL of d1qw9a2

>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]}	Back information, alignment and structure

>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]}	Back information, alignment and structure

>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}	Back information, alignment and structure

>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]}	Back information, alignment and structure

>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]}	Back information, alignment and structure

>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]}	Back information, alignment and structure

>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]}	Back information, alignment and structure

>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]}	Back information, alignment and structure

>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]}	Back information, alignment and structure

>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]}	Back information, alignment and structure

>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]}	Back information, alignment and structure

>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]}	Back information, alignment and structure

>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]}	Back information, alignment and structure

>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]}	Back information, alignment and structure

>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]}	Back information, alignment and structure

>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]}	Back information, alignment and structure

>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]}	Back information, alignment and structure

>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]}	Back information, alignment and structure

>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]}	Back information, alignment and structure

>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]}	Back information, alignment and structure

>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]}	Back information, alignment and structure

>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]}	Back information, alignment and structure

>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}	Back information, alignment and structure

>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]}	Back information, alignment and structure

>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]}	Back information, alignment and structure

>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]}	Back information, alignment and structure

>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}	Back information, alignment and structure

>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]}	Back information, alignment and structure

>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]}	Back information, alignment and structure

>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]}	Back information, alignment and structure

>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]}	Back information, alignment and structure

>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]}	Back information, alignment and structure

>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]}	Back information, alignment and structure

>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]}	Back information, alignment and structure

>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]}	Back information, alignment and structure

>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]}	Back information, alignment and structure

>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]}	Back information, alignment and structure

>d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]}	Back information, alignment and structure

>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure