Citrus Sinensis ID: 009189

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
MGEYRSSDDDYDYDYDYYDDDDEVDFVDDDENAAELEAAVEPEIPPNSCPSSKVITKESLLAAQMEDLIRVMDLLSLKEQHARTLLIHYRWDVEKVLAVLVEYGKERLFAKAGLTIVETDDVSSSQVSSSYCCNICFDDVSLEEITTMDCGHYFCNSCWTEHFIVKINEGQSRRITCMEHKCNAICDESKIRCLVRARDSDLADKFDRFMLESYIEDNKRVKWCPSVPHCGNAIRIEVDELREVECACGLQFCFRCSYEAHSPCSCYMWDLWSKKCQDESETVNYIAVHTKHCPKCQKLVEKNGGCNLVSCICGQPFCWLCGAATGSDHTWTSIAGHSCGRYKEDREKETESAKRSLERYIHYYSRYEAHRDSSKLESKMKETMEDNIKILEECSTASSKDFVWLFNGVDRLFRSRRVLAYSYPFAYYMFDGDLFADEMTKGEREMKQNLFEDQQQQFEANIEKLSSFLDEKFHLYNEDEIKDLKLRVIALSATTDNLCRNLYECIETDLLGSLKHSVHEIAPYNTNGIEKASLPSYQDT
ccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccECcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccEEccccccccccccccccccccccccHHHHHHHcccccHHHHHHHccccccccccccEECccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
******************DDDDEVDFVDDDENAAELE*********NSCPSSKVITKESLLAAQMEDLIRVMDLLSLKEQHARTLLIHYRWDVEKVLAVLVEYGKERLFAKAGLTIVET*********SSYCCNICFDDVSLEEITTMDCGHYFCNSCWTEHFIVKINEGQSRRITCMEHKCNAICDESKIRCLVRARDSDLADKFDRFMLESYIEDNKRVKWCPSVPHCGNAIRIEVDELREVECACGLQFCFRCSYEAHSPCSCYMWDLWSKKCQDESETVNYIAVHTKHCPKCQKLVEKNGGCNLVSCICGQPFCWLCGAATGSDHTWTSIAGHSCGRYK************SLERYIHYYSRYEAHRDSSKLESKMKETME**IKILEECSTASSKDFVWLFNGVDRLFRSRRVLAYSYPFAYYMFDGDLFADEMTKGEREMKQNLFEDQQQQFEANIEKLSSFLDEKFHLYNEDEIKDLKLRVIALSATTDNLCRNLYECIETDLLGSLKHSVHE********************
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MGEYRSSDDDYDYDYDYYDDDDEVDFVDDDENAAELEAAVEPEIPPNSCPSSKVITKESLLAAQMEDLIRVMDLLSLKEQHARTLLIHYRWDVEKVLAVLVEYGKERLFAKAGLTIVETDDVSSSQVSSSYCCNICFDDVSLEEITTMDCGHYFCNSCWTEHFIVKINEGQSRRITCMEHKCNAICDESKIRCLVRARDSDLADKFDRFMLESYIEDNKRVKWCPSVPHCGNAIRIEVDELREVECACGLQFCFRCSYEAHSPCSCYMWDLWSKKCQDESETVNYIAVHTKHCPKCQKLVEKNGGCNLVSCICGQPFCWLCGAATGSDHTWTSIAGHSCGRYKEDREKETESAKRSLERYIHYYSRYEAHRDSSKLESKMKETMEDNIKILEECSTASSKDFVWLFNGVDRLFRSRRVLAYSYPFAYYMFDGDLFADEMTKGEREMKQNLFEDQQQQFEANIEKLSSFLDEKFHLYNEDEIKDLKLRVIALSATTDNLCRNLYECIETDLLGSLKHSVHEIAPYNTNGIEKASLPSYQDT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable E3 ubiquitin-protein ligase ARI2 Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.probableQ84RR2

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4AP4, chain A
Confidence level:very confident
Coverage over the Query: 128-195,215-259,272-274,289-303
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Template: 1WD2, chain A
Confidence level:very confident
Coverage over the Query: 285-344
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Template: 1WIM, chain A
Confidence level:confident
Coverage over the Query: 128-218
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Template: 3K1L, chain B
Confidence level:probable
Coverage over the Query: 46-71,88-188
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Template: 1WJ7, chain A
Confidence level:probable
Coverage over the Query: 56-103
View the alignment between query and template
View the model in PyMOL