Citrus Sinensis ID: 009271


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
MVNLVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSLLVLMCLLLSSD
cHHHHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHcccccccccccccccccHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEECcccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccCEEEEEEEEEEEEcccccccccccccccEEEEcEEcccccccccccccCEECcccccccHHHHHHHcccccccEEEEcccccccEEEEccccccccccCEEEEcccccccEEEEEEEEEEccEEcccccccEEEEccccccccccHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccEEEEEcccEEEECcccCEEEEEcccccEEEEEEECccccEEEECcEEECcEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
*VNLVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWK**************************QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS****************CPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE*******************************************************LDSVLRVACSLLVLMCLLLSS*
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MVNLVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSLLVLMCLLLSSD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Aspartic proteinase-like protein 1 probableQ9LX20

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1QDM, chain A
Confidence level:very confident
Coverage over the Query: 98-145,158-172,191-457
View the alignment between query and template
View the model in PyMOL
Template: 3AUP, chain A
Confidence level:very confident
Coverage over the Query: 100-143,164-465
View the alignment between query and template
View the model in PyMOL