Citrus Sinensis ID: 009271
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LX20 | 528 | Aspartic proteinase-like | yes | no | 0.884 | 0.901 | 0.519 | 1e-142 | |
| Q9S9K4 | 475 | Aspartic proteinase-like | no | no | 0.639 | 0.724 | 0.262 | 2e-24 | |
| Q766C2 | 438 | Aspartic proteinase nepen | N/A | no | 0.672 | 0.826 | 0.235 | 2e-16 | |
| Q9LS40 | 500 | Protein ASPARTIC PROTEASE | no | no | 0.598 | 0.644 | 0.267 | 3e-15 | |
| Q6XBF8 | 437 | Aspartic proteinase CDR1 | no | no | 0.693 | 0.853 | 0.238 | 3e-14 | |
| Q0IU52 | 410 | Aspartic proteinase Asp1 | no | no | 0.643 | 0.843 | 0.212 | 1e-13 | |
| Q766C3 | 437 | Aspartic proteinase nepen | N/A | no | 0.622 | 0.766 | 0.220 | 5e-12 | |
| A2ZC67 | 410 | Aspartic proteinase Asp1 | N/A | no | 0.654 | 0.858 | 0.206 | 2e-11 | |
| P00793 | 367 | Pepsin A OS=Gallus gallus | yes | no | 0.520 | 0.762 | 0.252 | 3e-09 | |
| P18242 | 410 | Cathepsin D OS=Mus muscul | yes | no | 0.568 | 0.746 | 0.247 | 2e-08 |
| >sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/502 (51%), Positives = 347/502 (69%), Gaps = 26/502 (5%)
Query: 4 LVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLE 63
+ C+LF + + + A FSS+L+HRFSDE + + S +DS P K S+EY
Sbjct: 7 FLLFCVLF--LATEETLASLFSSRLIHRFSDEGRASIKTPSS----SDSLPNKQSLEYYR 60
Query: 64 LLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSF 123
LL +D++RQ+ N ++ Q L PSEGS+T GN F WLHYTWIDIGTP+VSF
Sbjct: 61 LLAESDFRRQRM-------NLGAKVQSLVPSEGSKTISSGNDFGWLHYTWIDIGTPSVSF 113
Query: 124 LVALDAGSNLLWVPCQCIQCAPLSASYYTSL-DRNLSEYDPSSSSSSKNVSCSHPLCKSR 182
LVALD GSNLLW+PC C+QCAPL+++YY+SL ++L+EY+PSSSS+SK CSH LC S
Sbjct: 114 LVALDTGSNLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLCDSA 173
Query: 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRK 239
S C+S K+ CPY +Y + +TSSSG LV+DILHL + + SSV++ V+IGCG+K
Sbjct: 174 SDCESPKEQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKK 233
Query: 240 QTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ 299
Q+G YLDG APDG+MGLG ++SVPS L+KAGL++NSFS+CFDE DSG ++FGD GP+ Q
Sbjct: 234 QSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQ 293
Query: 300 QSTSFLPI-GEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKF 358
QST FL + KY Y VGVE+ CIGNSCL Q+ F +DSG SFT+LP EIY +V ++
Sbjct: 294 QSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEI 353
Query: 359 DKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTV 418
D+ +++ + +G SW+YCY +S+E KVP ++L FS N +FV+ +F F +++G
Sbjct: 354 DRHINATSKNFEGVSWEYCYESSAEP--KVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQ 411
Query: 419 FCLTVMSTDGDYGI--IGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAG 476
FCL + S G GI IGQN+M G+R+VFDREN+KL WS SKC+E DK P +
Sbjct: 412 FCLPI-SPSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGST 468
Query: 477 QSPNPLPTTEQQSTSNGQAAAP 498
SPNPLPT EQQS G A +P
Sbjct: 469 SSPNPLPTDEQQS-RGGHAVSP 489
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: - |
| >sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 166/369 (44%), Gaps = 25/369 (6%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSS 167
L++T I +G+P + V +D GS++LW+ C+ C +C T+L+ LS +D ++SS
Sbjct: 73 LYFTKIKLGSPPKEYHVQVDTGSDILWINCKPCPKCPT-----KTNLNFRLSLFDMNASS 127
Query: 168 SSKNVSCSHPLCKSRSSCKSLKDP--CPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQ 225
+SK V C C S S + C Y Y+ E TS G + D+L L +
Sbjct: 128 TSKKVGCDDDFCSFISQSDSCQPALGCSYHIVYADESTSD-GKFIRDMLTLEQVTGDLKT 186
Query: 226 SSVQSSVIIGCGRKQTGSYLDG-AAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDEN 284
+ V+ GCG Q+G +G +A DGVMG G + SV S LA G + FS C D
Sbjct: 187 GPLGQEVVFGCGSDQSGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCLDNV 246
Query: 285 DSGSVF-FGDQGPATQQSTSFLPIGEKYDAYFVGVE----SYCIGNSCLTQSGFQALVDS 339
G +F G ++T +P Y+ +G++ S + S + G +VDS
Sbjct: 247 KGGGIFAVGVVDSPKVKTTPMVPNQMHYNVMLMGMDVDGTSLDLPRSIVRNGG--TIVDS 304
Query: 340 GASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKY-CYNASSEEMLKVPDMRLIFSKN 398
G + + P +Y ++ + +++ + + L + C++ S+ P + F +
Sbjct: 305 GTTLAYFPKVLYDSLI---ETILARQPVKLHIVEETFQCFSFSTNVDEAFPPVSFEFEDS 361
Query: 399 QSFVVRNHIFSFPENEGFTVFCLTV--MSTD--GDYGIIGQNFMMGHRIVFDRENLKLAW 454
V H + F E F ++TD + ++G + +V+D +N + W
Sbjct: 362 VKLTVYPHDYLFTLEEELYCFGWQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGW 421
Query: 455 SHSKCEEVI 463
+ C I
Sbjct: 422 ADHNCSSSI 430
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: - |
| >sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 176/425 (41%), Gaps = 63/425 (14%)
Query: 56 KNSVEYLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFF-GNQFYWLHYTWI 114
KN +Y L+ KR + R++ S N +L S G +T + G+ Y ++ +
Sbjct: 53 KNLTKYE--LIKRAIKRGERRMR-------SINAMLQSSSGIETPVYAGDGEYLMN---V 100
Query: 115 DIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173
IGTP+ SF +D GS+L+W C+ C QC + ++P SSS +
Sbjct: 101 AIGTPDSSFSAIMDTGSDLIWTQCEPCTQC----------FSQPTPIFNPQDSSSFSTLP 150
Query: 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVI 233
C C+ S + C Y Y + +++ GY+ + ++S ++
Sbjct: 151 CESQYCQDLPSETCNNNECQYTYGYG-DGSTTQGYMATETFTF--------ETSSVPNIA 201
Query: 234 IGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGS---VF 290
GCG G A G++G+G G +S+PS L FS C S S +
Sbjct: 202 FGCGEDNQGFGQGNGA--GLIGMGWGPLSLPSQLGVG-----QFSYCMTSYGSSSPSTLA 254
Query: 291 FGDQG---PATQQSTSFLPIGEKYDAYFVGVESYCIG--NSCLTQSGFQ--------ALV 337
G P ST+ + Y++ ++ +G N + S FQ ++
Sbjct: 255 LGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMII 314
Query: 338 DSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSE-EMLKVPDMRLIFS 396
DSG + T+LP + Y V F ++ + + C+ S+ ++VP++ + F
Sbjct: 315 DSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFD 374
Query: 397 KNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYG--IIGQNFMMGHRIVFDRENLKLAW 454
+ +I P EG V CL M + G I G ++++D +NL +++
Sbjct: 375 GGVLNLGEQNILISPA-EG--VICL-AMGSSSQLGISIFGNIQQQETQVLYDLQNLAVSF 430
Query: 455 SHSKC 459
++C
Sbjct: 431 VPTQC 435
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Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake. Nepenthes gracilis (taxid: 150966) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: 1 EC: 2 |
| >sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 161/367 (43%), Gaps = 45/367 (12%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
+++ I +GTP + LD GS++ W IQC P + Y ++ ++P+SSS+
Sbjct: 162 YFSRIGVGTPAKEMYLVLDTGSDVNW-----IQCEPCADCY----QQSDPVFNPTSSSTY 212
Query: 170 KNVSCSHPLCK--SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
K+++CS P C S+C+S K C Y Y + + + G L D + + K
Sbjct: 213 KSLTCSAPQCSLLETSACRSNK--CLYQVSYG-DGSFTVGELATDTVTFGNSGKI----- 264
Query: 228 VQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSG 287
++V +GCG G + A G+ V S+ + + SFS C + DSG
Sbjct: 265 --NNVALGCGHDNEGLFTGAAGLLGLG------GGVLSITNQ--MKATSFSYCLVDRDSG 314
Query: 288 ---SVFFGDQGPATQQSTSFLPIGEKYDA-YFVGVESYCIGNS--CLTQSGFQ------- 334
S+ F +T+ L +K D Y+VG+ + +G L + F
Sbjct: 315 KSSSLDFNSVQLGGGDATAPLLRNKKIDTFYYVGLSGFSVGGEKVVLPDAIFDVDASGSG 374
Query: 335 -ALVDSGASFTFLPTEIYAEVVVKFDKL-VSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392
++D G + T L T+ Y + F KL V+ K+ S + + CY+ SS +KVP +
Sbjct: 375 GVILDCGTAVTRLQTQAYNSLRDAFLKLTVNLKKGSSSISLFDTCYDFSSLSTVKVPTVA 434
Query: 393 LIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKL 452
F+ +S + + P ++ T FC T IIG G RI +D +
Sbjct: 435 FHFTGGKSLDLPAKNYLIPVDDSGT-FCFAFAPTSSSLSIIGNVQQQGTRITYDLSKNVI 493
Query: 453 AWSHSKC 459
S +KC
Sbjct: 494 GLSGNKC 500
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Aspartic protease involved in drought avoidance through abscisic acid signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: - |
| >sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 185/445 (41%), Gaps = 72/445 (16%)
Query: 22 VSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRV-KLQ 80
+ F++ L+HR S ++ P N +E L N R RV
Sbjct: 29 LGFTADLIHRDSPKS-----------------PFYNPMETSSQRLRNAIHRSVNRVFHFT 71
Query: 81 SNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQC 140
+N+ + Q+ S + Y ++ + IGTP + D GS+LLW
Sbjct: 72 EKDNTPQPQIDLTSNSGE--------YLMN---VSIGTPPFPIMAIADTGSDLLWT---- 116
Query: 141 IQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC---KSRSSCKSLKDPCPYIAD 197
QCAP YT +D +DP +SS+ K+VSCS C ++++SC + + C Y
Sbjct: 117 -QCAPCD-DCYTQVD---PLFDPKTSSTYKDVSCSSSQCTALENQASCSTNDNTCSYSLS 171
Query: 198 YSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257
Y +++ + G + D L L S Q ++IIGCG G++ +
Sbjct: 172 YG-DNSYTKGNIAVDTLTLGSSDTRPMQ---LKNIIIGCGHNNAGTF------NKKGSGI 221
Query: 258 LGDVSVP-SLLAKAG-LIQNSFSICF-----DENDSGSVFFGDQGPATQQ---STSFLPI 307
+G P SL+ + G I FS C ++ + + FG + ST +
Sbjct: 222 VGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSKKDQTSKINFGTNAIVSGSGVVSTPLIAK 281
Query: 308 GEKYDAYFVGVESYCIGNSCL-------TQSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360
+ Y++ ++S +G+ + S ++DSG + T LPTE Y+E+
Sbjct: 282 ASQETFYYLTLKSISVGSKQIQYSGSDSESSEGNIIIDSGTTLTLLPTEFYSELEDAVAS 341
Query: 361 LVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFC 420
+ +++ + CY+A+ + LKVP + + F + ++ F +E F
Sbjct: 342 SIDAEKKQDPQSGLSLCYSATGD--LKVPVITMHFDGADVKLDSSNAF-VQVSEDLVCFA 398
Query: 421 LTVMSTDGDYGIIGQ-NFMMGHRIV 444
+ YG + Q NF++G+ V
Sbjct: 399 FRGSPSFSIYGNVAQMNFLVGYDTV 423
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Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: - |
| >sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 162/404 (40%), Gaps = 58/404 (14%)
Query: 93 PSEGSQTHFFGNQFYWLHY-TWIDIGTPNVSFLVALDAGSNLLWVPCQ--CIQCAPLSAS 149
PS GN + H+ ++IG P S+ + +D GS L W+ C C C +
Sbjct: 20 PSSAVVLELHGNVYPIGHFFITMNIGDPAKSYFLDIDTGSTLTWLQCDAPCTNCNIVPHV 79
Query: 150 YYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS-------CKSLKDPCPYIADYSTED 202
Y + L V+C+ LC + C S K C Y+ Y D
Sbjct: 80 LYKPTPKKL-------------VTCADSLCTDLYTDLGKPKRCGSQKQ-CDYVIQYV--D 123
Query: 203 TSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAP-DGVMGLGLGDV 261
+SS G LV D FS A + +++ GCG Q + P D ++GL G V
Sbjct: 124 SSSMGVLVID-----RFSLSASNGTNPTTIAFGCGYDQGKKNRNVPIPVDSILGLSRGKV 178
Query: 262 SVPSLLAKAGLI-QNSFSICFDENDSGSVFFGD-QGPATQQSTSFLPIGEKYDAYFVGVE 319
++ S L G+I ++ C G +FFGD Q P + + + + KY + G
Sbjct: 179 TLLSQLKSQGVITKHVLGHCISSKGGGFLFFGDAQVPTSGVTWTPMNREHKYYSPGHGTL 238
Query: 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSK-----RISLQGNSW 374
+ + ++ + + DSGA++T+ + Y + ++S+ ++ + +
Sbjct: 239 HFDSNSKAISAAPMAVIFDSGATYTYFAAQPYQATLSVVKSTLNSECKFLTEVTEKDRAL 298
Query: 375 KYCYNASSEEMLKVPDMRLIF----------SKNQSFVVRNHIFSFPENEGFTVFCLTVM 424
C+ ++++ + +++ F K + + + EG CL ++
Sbjct: 299 TVCWKG-KDKIVTIDEVKKCFRSLSLEFADGDKKATLEIPPEHYLIISQEGHV--CLGIL 355
Query: 425 STDGDY------GIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462
++ +IG M+ +++D E L W + +C+ +
Sbjct: 356 DGSKEHLSLAGTNLIGGITMLDQMVIYDSERSLLGWVNYQCDRI 399
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Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: - |
| >sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 157/386 (40%), Gaps = 51/386 (13%)
Query: 93 PSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYY 151
PS + + G+ Y ++ + IGTP F +D GS+L+W CQ C QC
Sbjct: 81 PSGVETSVYAGDGEYLMN---LSIGTPAQPFSAIMDTGSDLIWTQCQPCTQC-------- 129
Query: 152 TSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVD 211
+++ ++P SSS + CS LC++ SS + C Y Y + + + G +
Sbjct: 130 --FNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYG-DGSETQGSMGT 186
Query: 212 DILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAG 271
+ L S S ++ GCG G A G++G+G G +S+PS L
Sbjct: 187 ETLTFGSVSI--------PNITFGCGENNQGFGQGNGA--GLVGMGRGPLSLPSQLDVT- 235
Query: 272 LIQNSFSICFDENDSGS---VFFG---DQGPATQQSTSFLPIGEKYDAYFVGVESYCIGN 325
FS C S + + G + A +T+ + + Y++ + +G+
Sbjct: 236 ----KFSYCMTPIGSSTPSNLLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGS 291
Query: 326 SCLT--QSGFQ---------ALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSW 374
+ L S F ++DSG + T+ Y V +F ++ ++ + +
Sbjct: 292 TRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGF 351
Query: 375 KYCYNASSE-EMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGII 433
C+ S+ L++P + F + + F P N + CL + S+ I
Sbjct: 352 DLCFQTPSDPSNLQIPTFVMHFDGGDLELPSENYFISPSNG---LICLAMGSSSQGMSIF 408
Query: 434 GQNFMMGHRIVFDRENLKLAWSHSKC 459
G +V+D N ++++ ++C
Sbjct: 409 GNIQQQNMLVVYDTGNSVVSFASAQC 434
|
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake. Nepenthes gracilis (taxid: 150966) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: 1 EC: 2 |
| >sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 158/398 (39%), Gaps = 46/398 (11%)
Query: 93 PSEGSQTHFFGNQFYWLHY-TWIDIGTPNVSFLVALDAGSNLLWVPCQ--CIQCAPLSAS 149
PS GN + H+ ++IG P + + +D GS L W+ C CI C +
Sbjct: 20 PSSAVVLELHGNVYPIGHFFVTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHG 79
Query: 150 YYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYL 209
Y E + + + + + + C K+ C Y Y SS G L
Sbjct: 80 LYK------PELKYAVKCTEQRCADLYADLRKPMKCGP-KNQCHYGIQYV--GGSSIGVL 130
Query: 210 VDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAP-DGVMGLGLGDVSVPSLLA 268
+ D SFS A + +S+ GCG Q + + P +G++GLG G V++ S L
Sbjct: 131 IVD-----SFSLPASNGTNPTSIAFGCGYNQGKNNHNVPTPVNGILGLGRGKVTLLSQLK 185
Query: 269 KAGLI-QNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAY--FVGVESYCIGN 325
G+I ++ C G +FFGD T T + P+ ++ Y G + +
Sbjct: 186 SQGVITKHVLGHCISSKGKGFLFFGDAKVPTSGVT-WSPMNREHKHYSPRQGTLQFNSNS 244
Query: 326 SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSK-----RISLQGNSWKYCYNA 380
++ + + + DSGA++T+ + Y + +S + + + + C+
Sbjct: 245 KPISAAPMEVIFDSGATYTYFALQPYHATLSVVKSTLSKECKFLTEVKEKDRALTVCWKG 304
Query: 381 SSEEMLKVPDMRLIFS----------KNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDY 430
+++ + +++ F K + + + EG CL ++ ++
Sbjct: 305 -KDKIRTIDEVKKCFRSLSLKFADGDKKATLEIPPEHYLIISQEGHV--CLGILDGSKEH 361
Query: 431 ------GIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462
+IG M+ +++D E L W + +C+ +
Sbjct: 362 PSLAGTNLIGGITMLDQMVIYDSERSLLGWVNYQCDRI 399
|
Possesses protease activity in vitro. Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: - |
| >sp|P00793|PEPA_CHICK Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 92/372 (24%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSSS 166
+Y I IGTP F V D GS+ LWVP C+ C+ N +DPS S
Sbjct: 59 YYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCKSSACS------------NHKRFDPSKS 106
Query: 167 SSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQS 226
S+ VS + + YIA Y T S SG L D + ++S
Sbjct: 107 STY--VSTNETV---------------YIA-YGT--GSMSGILGYDTVAVSSI------- 139
Query: 227 SVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS-------VPSLLAKAGLIQNSFSI 279
VQ+ I G + GS+ DG++GL +S +++++ + Q+ FS+
Sbjct: 140 DVQNQ-IFGLSETEPGSFFYYCNFDGILGLAFPSISSSGATPVFDNMMSQHLVAQDLFSV 198
Query: 280 CFDEN-DSGS-VFFGDQGP-ATQQSTSFLPI-GEKYDAYFVGVESYCIGN---SCLTQSG 332
++ ++GS V FG P T + ++P+ E Y + + ++ +GN +C
Sbjct: 199 YLSKDGETGSFVLFGGIDPNYTTKGIYWVPLSAETY--WQITMDRVTVGNKYVACFFTC- 255
Query: 333 FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392
QA+VD+G S +P Y ++++ +S G S +++ K+PD+
Sbjct: 256 -QAIVDTGTSLLVMPQGAY-------NRIIKDLGVSSDG-------EISCDDISKLPDV- 299
Query: 393 LIFSKNQSFVVRNHIFSFP------ENEGFTVFCLTVMSTDGDYG---IIGQNFMMGHRI 443
+F + H F+ P +G + M T + G I+G F+ + +
Sbjct: 300 -------TFHINGHAFTLPASAYVLNEDGSCMLGFENMGTPTELGEQWILGDVFIREYYV 352
Query: 444 VFDRENLKLAWS 455
+FDR N K+ S
Sbjct: 353 IFDRANNKVGLS 364
|
Shows particularly broad specificity; although bonds involving phenylalanine and leucine are preferred, many others are also cleaved to some extent. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: 1 |
| >sp|P18242|CATD_MOUSE Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 150/371 (40%), Gaps = 65/371 (17%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
+Y I IGTP F V D GS+ LWVP I C L
Sbjct: 79 YYGDIGIGTPPQCFTVVFDTGSSNLWVP--SIHCKIL----------------------- 113
Query: 170 KNVSC-SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSV 228
+++C H S S +K+ + Y + S SGYL D + + S + +
Sbjct: 114 -DIACWVHHKYNSDKSSTYVKNGTSFDIHYGS--GSLSGYLSQDTVSVPCKSDQSKARGI 170
Query: 229 Q-SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV-------PSLLAKAGLIQNSFSIC 280
+ I G KQ G A DG++G+G +SV +L+ + + +N FS
Sbjct: 171 KVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLMQQKLVDKNIFSFY 230
Query: 281 FDENDSGS-----VFFGDQGPATQQSTSFLPIGEKYDAYF-VGVESYCIGNS-CLTQSGF 333
+ + G + G S+L + K AY+ V ++ +GN L + G
Sbjct: 231 LNRDPEGQPGGELMLGGTDSKYYHGELSYLNVTRK--AYWQVHMDQLEVGNELTLCKGGC 288
Query: 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRL 393
+A+VD+G S P E E+ K + + + +QG C SS +P + L
Sbjct: 289 EAIVDTGTSLLVGPVEEVKEL----QKAIGAVPL-IQGEYMIPCEKVSS-----LPTVYL 338
Query: 394 -IFSKNQSFVVRNHIFSFPENEGFTVFCLT-VMSTD-----GDYGIIGQNFMMGHRIVFD 446
+ KN +I ++G CL+ M D G I+G F+ + VFD
Sbjct: 339 KLGGKNYELHPDKYILKV--SQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFD 396
Query: 447 RENLKLAWSHS 457
R+N ++ ++++
Sbjct: 397 RDNNRVGFANA 407
|
Acid protease active in intracellular protein breakdown. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 3 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | ||||||
| 224063191 | 536 | predicted protein [Populus trichocarpa] | 0.916 | 0.919 | 0.630 | 0.0 | |
| 255545620 | 535 | Aspartic proteinase nepenthesin-2 precur | 0.949 | 0.955 | 0.598 | 0.0 | |
| 359492825 | 531 | PREDICTED: aspartic proteinase-like prot | 0.931 | 0.943 | 0.597 | 1e-178 | |
| 302141912 | 521 | unnamed protein product [Vitis vinifera] | 0.912 | 0.942 | 0.606 | 1e-178 | |
| 296082464 | 530 | unnamed protein product [Vitis vinifera] | 0.936 | 0.950 | 0.557 | 1e-166 | |
| 255576176 | 542 | Aspartic proteinase nepenthesin-1 precur | 0.929 | 0.922 | 0.563 | 1e-165 | |
| 225438629 | 511 | PREDICTED: aspartic proteinase-like prot | 0.899 | 0.947 | 0.573 | 1e-165 | |
| 356551638 | 880 | PREDICTED: aspartic proteinase-like prot | 0.897 | 0.548 | 0.559 | 1e-164 | |
| 356548395 | 525 | PREDICTED: aspartic proteinase-like prot | 0.929 | 0.952 | 0.540 | 1e-162 | |
| 449445106 | 523 | PREDICTED: aspartic proteinase-like prot | 0.907 | 0.933 | 0.535 | 1e-159 |
| >gi|224063191|ref|XP_002301033.1| predicted protein [Populus trichocarpa] gi|222842759|gb|EEE80306.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/503 (63%), Positives = 392/503 (77%), Gaps = 10/503 (1%)
Query: 13 CILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKR 72
C + S ++FSSKL+HRFSDEAK IS+ GN S D WPK+ S EY +LLL ND KR
Sbjct: 17 CCQFEASIGLTFSSKLIHRFSDEAKSISISRKGNAS-GDLWPKRYSFEYFQLLLGNDLKR 75
Query: 73 QKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSN 132
Q+ ++ S +NQLLFPS+GSQ FFGN+ WLHYTWIDIGTPNVSFLVALDAGS+
Sbjct: 76 QRMKL------GSQKNQLLFPSQGSQALFFGNELDWLHYTWIDIGTPNVSFLVALDAGSD 129
Query: 133 LLWVPCQCIQCAPLSASYYT-SLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDP 191
LLWVPC CIQCAPLSASYY SLDR+LSEY PS SS+S+++SC H LC+ S+CK+ KDP
Sbjct: 130 LLWVPCDCIQCAPLSASYYNISLDRDLSEYSPSLSSTSRHLSCDHQLCEWGSNCKNPKDP 189
Query: 192 CPYIADYST-EDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAP 250
CPYI +Y E+T+S+G+LV+D LHLAS H + +Q+SV++GCGRKQ GS+ DGAAP
Sbjct: 190 CPYIFNYDDFENTTSAGFLVEDKLHLASVGDHTARKMLQASVVLGCGRKQGGSFFDGAAP 249
Query: 251 DGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEK 310
DGVMGLG GD+SVPSLLAKAGLIQN FS+CFDENDSG + FGD+G A+QQST FLPI
Sbjct: 250 DGVMGLGPGDISVPSLLAKAGLIQNCFSLCFDENDSGRILFGDRGHASQQSTPFLPIQGT 309
Query: 311 YDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ 370
Y AYFVGVESYC+GNSCL +SGF+ALVDSG+SFT+LP+E+Y E+V +FDK V++KRIS Q
Sbjct: 310 YVAYFVGVESYCVGNSCLKRSGFKALVDSGSSFTYLPSEVYNELVSEFDKQVNAKRISFQ 369
Query: 371 GNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDY 430
W YCYNASS+E+ +P ++L F +NQ+FVV N +S P ++GFT+FCL++ TDG Y
Sbjct: 370 DGLWDYCYNASSQELHDIPAIQLKFPRNQNFVVHNPTYSIPHHQGFTMFCLSLQPTDGSY 429
Query: 431 GIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQST 490
GIIGQNFM+G+R+VFD ENLKL WS+S C++ D + VHL PPP +SPNPLPT EQQS
Sbjct: 430 GIIGQNFMIGYRMVFDIENLKLGWSNSSCQDTSDSADVHLAPPPDNKSPNPLPTNEQQSI 489
Query: 491 SNGQAAAPPSTAKTAPSKSIAAS 513
+ AP +T+ S+S AAS
Sbjct: 490 PRTPSVAPAVAGRTS-SESSAAS 511
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545620|ref|XP_002513870.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223546956|gb|EEF48453.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/526 (59%), Positives = 392/526 (74%), Gaps = 15/526 (2%)
Query: 4 LVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLE 63
L IC C L + S ++FSSKL+HRFS+EAK IS + NVS + +WP KNS +YL+
Sbjct: 7 LFVICF---CFLSNHSIGLTFSSKLIHRFSEEAKSLLISGNDNVS-SQTWPNKNSFQYLQ 62
Query: 64 LLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSF 123
LLL ND KRQK ++ Q NQLLFPS GS T F+GN WLHYTWIDIGTPNVSF
Sbjct: 63 LLLDNDLKRQKMKLGAQ-------NQLLFPSLGSHTFFYGNDLDWLHYTWIDIGTPNVSF 115
Query: 124 LVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183
LVALDAGS+L WVPC CIQCAPLSAS Y LDR+LSEY PS S++S+++SC+H LC+ S
Sbjct: 116 LVALDAGSDLSWVPCDCIQCAPLSASLYKPLDRDLSEYRPSLSTTSRHLSCNHQLCELGS 175
Query: 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK--HAPQSSVQSSVIIGCGRKQT 241
CK+LKDPCPYIADY+ +TSSSG+LV+DILHLAS S ++ Q VQ+SVI+GCGRKQT
Sbjct: 176 HCKNLKDPCPYIADYADPNTSSSGFLVEDILHLASVSDDSNSTQKRVQASVILGCGRKQT 235
Query: 242 GSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQS 301
G YLDGAAPDGVMGLG G +SVPSLLAKAGLI+ SFS+CFD N SG++ FGDQG +Q+S
Sbjct: 236 GGYLDGAAPDGVMGLGPGSISVPSLLAKAGLIRKSFSLCFDVNGSGTILFGDQGHTSQKS 295
Query: 302 TSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKL 361
T LP YDAY + VESYC+GNSCL QSGF+ALVDSGASFT+LP ++Y ++V++FDK
Sbjct: 296 TPLLPTQGNYDAYLIEVESYCVGNSCLKQSGFKALVDSGASFTYLPIDVYNKIVLEFDKQ 355
Query: 362 VSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCL 421
V+++RIS QG W YCYN SS+++ VP MRL F NQS ++ N + P+N+ F VFCL
Sbjct: 356 VNAQRISSQGGPWNYCYNTSSKQLDNVPAMRLSFLMNQSLLIHNSTYYVPQNQEFAVFCL 415
Query: 422 TVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNP 481
T+ TD +YGIIGQN+M G+R+VFD ENLKL WS S C+++ D++ V L P P QSPNP
Sbjct: 416 TLQPTDLNYGIIGQNYMTGYRVVFDMENLKLGWSSSNCKDISDETEVTLAPSPNDQSPNP 475
Query: 482 LPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSL 527
LPT EQQS N Q AP +T+ S+A +Q + +L + S+
Sbjct: 476 LPTNEQQSVPNKQGVAPAVAGRTSSKHSVA--SQHIPCLLHLISSV 519
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359492825|ref|XP_002284255.2| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 306/512 (59%), Positives = 392/512 (76%), Gaps = 11/512 (2%)
Query: 3 NLVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYL 62
+L+ + M + +++D + AV+FSSKL+HRFSDEAK ++S++GN+ ADSWPKK S +Y
Sbjct: 5 SLIPLLMAY-LLVVDAAIAVTFSSKLIHRFSDEAKAFFVSRNGNI-FADSWPKKRSFDYY 62
Query: 63 ELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVS 122
LLLS+D KRQK ++ + QLLFPSEGS F GN+F WLHYTWIDIGTPNVS
Sbjct: 63 RLLLSSDLKRQKLKL-------GAEYQLLFPSEGSDALFLGNEFGWLHYTWIDIGTPNVS 115
Query: 123 FLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182
FLVALDAGS+LLWVPC C+QCAPLSASYY L R+L+EY PS SS+SK +SC+ LC+
Sbjct: 116 FLVALDAGSDLLWVPCDCMQCAPLSASYYDRLGRDLNEYSPSLSSTSKPLSCNDQLCELG 175
Query: 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG 242
S CKS KDPCPY+A Y +E+TSSSG L++D LHLA FS+HA +SSV +SVIIGCGRKQ+G
Sbjct: 176 SDCKSSKDPCPYLASYYSENTSSSGLLIEDRLHLAPFSEHASRSSVWASVIIGCGRKQSG 235
Query: 243 SYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQST 302
++ DGAAPDG+MGLG GD+SVPSLLAKAGL++N+FSICFD+N SG++ FGDQG TQ+ST
Sbjct: 236 AFSDGAAPDGLMGLGPGDLSVPSLLAKAGLVRNTFSICFDDNHSGTILFGDQGLVTQKST 295
Query: 303 SFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLV 362
SF+P+ K+ Y + VE Y +G+S L +GFQALVDSG SFTFLP EIY ++VV+FDK V
Sbjct: 296 SFVPLEGKFVTYLIEVEGYLVGSSSLKTAGFQALVDSGTSFTFLPYEIYEKIVVEFDKQV 355
Query: 363 SSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF-PENEGFTVFCL 421
++ R S +G+ WKYCYN+SS+E+L +P + L+F+ NQSF+V N + ENE F VFCL
Sbjct: 356 NATRSSFKGSPWKYCYNSSSQELLNIPTVTLVFAMNQSFIVHNPVIKLISENEEFNVFCL 415
Query: 422 TVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNP 481
+ ++GIIGQNFM G+R+VFDRENLKL WS S C+++ D +HL PPP +SPNP
Sbjct: 416 PIQPIHEEFGIIGQNFMWGYRMVFDRENLKLGWSTSNCQDITDGKIMHLTPPPNDRSPNP 475
Query: 482 LPTTEQQSTSNGQAAAPPSTAKTAPSKSIAAS 513
LPT +QQ T + A AP +T P+KS A S
Sbjct: 476 LPTNQQQMTPSRHAVAPAVAGRT-PAKSAAVS 506
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302141912|emb|CBI19115.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/501 (60%), Positives = 386/501 (77%), Gaps = 10/501 (1%)
Query: 14 ILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQ 73
+++D + AV+FSSKL+HRFSDEAK ++S++GN+ ADSWPKK S +Y LLLS+D KRQ
Sbjct: 5 LVVDAAIAVTFSSKLIHRFSDEAKAFFVSRNGNI-FADSWPKKRSFDYYRLLLSSDLKRQ 63
Query: 74 KTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNL 133
K ++ + QLLFPSEGS F GN+F WLHYTWIDIGTPNVSFLVALDAGS+L
Sbjct: 64 KLKL-------GAEYQLLFPSEGSDALFLGNEFGWLHYTWIDIGTPNVSFLVALDAGSDL 116
Query: 134 LWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCP 193
LWVPC C+QCAPLSASYY L R+L+EY PS SS+SK +SC+ LC+ S CKS KDPCP
Sbjct: 117 LWVPCDCMQCAPLSASYYDRLGRDLNEYSPSLSSTSKPLSCNDQLCELGSDCKSSKDPCP 176
Query: 194 YIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGV 253
Y+A Y +E+TSSSG L++D LHLA FS+HA +SSV +SVIIGCGRKQ+G++ DGAAPDG+
Sbjct: 177 YLASYYSENTSSSGLLIEDRLHLAPFSEHASRSSVWASVIIGCGRKQSGAFSDGAAPDGL 236
Query: 254 MGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDA 313
MGLG GD+SVPSLLAKAGL++N+FSICFD+N SG++ FGDQG TQ+STSF+P+ K+
Sbjct: 237 MGLGPGDLSVPSLLAKAGLVRNTFSICFDDNHSGTILFGDQGLVTQKSTSFVPLEGKFVT 296
Query: 314 YFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNS 373
Y + VE Y +G+S L +GFQALVDSG SFTFLP EIY ++VV+FDK V++ R S +G+
Sbjct: 297 YLIEVEGYLVGSSSLKTAGFQALVDSGTSFTFLPYEIYEKIVVEFDKQVNATRSSFKGSP 356
Query: 374 WKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF-PENEGFTVFCLTVMSTDGDYGI 432
WKYCYN+SS+E+L +P + L+F+ NQSF+V N + ENE F VFCL + ++GI
Sbjct: 357 WKYCYNSSSQELLNIPTVTLVFAMNQSFIVHNPVIKLISENEEFNVFCLPIQPIHEEFGI 416
Query: 433 IGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSN 492
IGQNFM G+R+VFDRENLKL WS S C+++ D +HL PPP +SPNPLPT +QQ T +
Sbjct: 417 IGQNFMWGYRMVFDRENLKLGWSTSNCQDITDGKIMHLTPPPNDRSPNPLPTNQQQMTPS 476
Query: 493 GQAAAPPSTAKTAPSKSIAAS 513
A AP +T P+KS A S
Sbjct: 477 RHAVAPAVAGRT-PAKSAAVS 496
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082464|emb|CBI21469.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/515 (55%), Positives = 371/515 (72%), Gaps = 11/515 (2%)
Query: 1 MVNLVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVE 60
M + M +L++ A FS++L+HRFSDE K ++SG ++ SWP+ ++E
Sbjct: 1 MAARFLVAMSVVVLLIESCMAAMFSARLIHRFSDEVKAFRAARSG---LSGSWPEWRTME 57
Query: 61 YLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPN 120
Y ++L+ +DW+RQK + S+ Q LFPSEGS+T FGN + WLHYTWIDIGTPN
Sbjct: 58 YYKMLVRSDWERQKVML-------GSKYQFLFPSEGSKTMSFGNDYGWLHYTWIDIGTPN 110
Query: 121 VSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180
+SFLVALDAGS+LLW+PC CIQCAPLSASYY SLDR+L++Y PS SS+SK++SCSH LC+
Sbjct: 111 ISFLVALDAGSDLLWIPCDCIQCAPLSASYYGSLDRDLNQYSPSGSSTSKHLSCSHQLCE 170
Query: 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQ 240
S +C S K CPY +Y +E+TSSSG L++DILHL S A SSV++ VIIGCG +Q
Sbjct: 171 SSPNCDSPKQLCPYTINYYSENTSSSGLLIEDILHLTSGIDDASNSSVRAPVIIGCGMRQ 230
Query: 241 TGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQ 300
TG YLDG APDG+MGLGLG++SVPS L+KAGL++NSFS+CF+++DSG +FFGDQG ATQQ
Sbjct: 231 TGGYLDGVAPDGLMGLGLGEISVPSFLSKAGLVKNSFSLCFNDDDSGRIFFGDQGLATQQ 290
Query: 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360
+T FLP KY+ Y VGVE+ CIG+SC+ Q+ F+ALVDSGASFTFLP E Y VV +FDK
Sbjct: 291 TTLFLPSDGKYETYIVGVEACCIGSSCIKQTSFRALVDSGASFTFLPDESYRNVVDEFDK 350
Query: 361 LVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFC 420
V++ R S +G W+YCY +SS+E+LK P + L F+ N SFVV N +F +G FC
Sbjct: 351 QVNATRFSFEGYPWEYCYKSSSKELLKNPSVILKFALNNSFVVHNPVFVVHGYQGVVGFC 410
Query: 421 LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPN 480
L + DGD GI+GQNFM G+R+VFDRENLKL WS S C+++ D + L P P + PN
Sbjct: 411 LAIQPADGDIGILGQNFMTGYRMVFDRENLKLGWSRSNCQDLTDGERMPLTPSPNDRPPN 470
Query: 481 PLPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQ 515
PLP EQQ+T +G P+ A APS AAS Q
Sbjct: 471 PLPANEQQNTHSGHTIT-PAVAGRAPSNPSAASTQ 504
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255576176|ref|XP_002528982.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223531572|gb|EEF33401.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/511 (56%), Positives = 371/511 (72%), Gaps = 11/511 (2%)
Query: 9 MLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSN 68
++ +L+D S V+FSS+L+HRFSDE K +S+ ++S SWP+K S++Y ++L+++
Sbjct: 21 LVMASLLIDKSAEVTFSSRLIHRFSDEVKALRVSRKDSLSY--SWPEKKSMDYYQILVNS 78
Query: 69 DWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALD 128
D++RQK ++ Q Q LFPS+GS+T G+ F WLHYTWIDIGTP+VSFLVALD
Sbjct: 79 DFQRQKMKLGPQY-------QFLFPSQGSKTMSLGDDFGWLHYTWIDIGTPHVSFLVALD 131
Query: 129 AGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSL 188
AGS+LLWVPC C+QCAPLSASYY+SLDR+L+EY PS SS+SK++SCSH LC+ +C S
Sbjct: 132 AGSDLLWVPCDCLQCAPLSASYYSSLDRDLNEYSPSHSSTSKHLSCSHQLCELGPNCNSP 191
Query: 189 KDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGA 248
K PCPY DY TE+TSSSG LV+DILHLAS +A SV++ V+IGCG KQ+G YLDG
Sbjct: 192 KQPCPYSMDYYTENTSSSGLLVEDILHLASNGDNALSYSVRAPVVIGCGMKQSGGYLDGV 251
Query: 249 APDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIG 308
APDG+MGLGL ++SVPS LAKAGLI+NSFS+CFDE+DSG +FFGDQGP TQQST FL +
Sbjct: 252 APDGLMGLGLAEISVPSFLAKAGLIRNSFSMCFDEDDSGRIFFGDQGPTTQQSTPFLTLD 311
Query: 309 EKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRIS 368
Y Y VGVE +C+G+SCL Q+ F+ALVD+G SFTFLP +Y + +FD+ V++ S
Sbjct: 312 GNYTTYVVGVEGFCVGSSCLKQTSFRALVDTGTSFTFLPNGVYERITEEFDRQVNATISS 371
Query: 369 LQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDG 428
G WKYCY +SS + KVP ++LIF N SFV+ N +F +G T FCL + T+G
Sbjct: 372 FNGYPWKYCYKSSSNHLTKVPSVKLIFPLNNSFVIHNPVFMIYGIQGITGFCLAIQPTEG 431
Query: 429 DYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQ 488
D G IGQNFM G+R+VFDREN+KL WSHS CE+ + + L P G NPLPT EQQ
Sbjct: 432 DIGTIGQNFMAGYRVVFDRENMKLGWSHSSCEDRSNDKRMPLT-SPNGTLVNPLPTNEQQ 490
Query: 489 STSNGQAAAPPSTAKTAPSKSIAASAQQLDS 519
S+ G A + P+ A APSK AA+ Q L S
Sbjct: 491 SSPGGHAVS-PAVAGRAPSKPSAAAVQLLPS 520
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438629|ref|XP_002281243.1| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/495 (57%), Positives = 364/495 (73%), Gaps = 11/495 (2%)
Query: 21 AVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKLQ 80
A FS++L+HRFSDE K ++SG ++ SWP+ ++EY ++L+ +DW+RQK +
Sbjct: 2 AAMFSARLIHRFSDEVKAFRAARSG---LSGSWPEWRTMEYYKMLVRSDWERQKVML--- 55
Query: 81 SNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQC 140
S+ Q LFPSEGS+T FGN + WLHYTWIDIGTPN+SFLVALDAGS+LLW+PC C
Sbjct: 56 ----GSKYQFLFPSEGSKTMSFGNDYGWLHYTWIDIGTPNISFLVALDAGSDLLWIPCDC 111
Query: 141 IQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYST 200
IQCAPLSASYY SLDR+L++Y PS SS+SK++SCSH LC+S +C S K CPY +Y +
Sbjct: 112 IQCAPLSASYYGSLDRDLNQYSPSGSSTSKHLSCSHQLCESSPNCDSPKQLCPYTINYYS 171
Query: 201 EDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260
E+TSSSG L++DILHL S A SSV++ VIIGCG +QTG YLDG APDG+MGLGLG+
Sbjct: 172 ENTSSSGLLIEDILHLTSGIDDASNSSVRAPVIIGCGMRQTGGYLDGVAPDGLMGLGLGE 231
Query: 261 VSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVES 320
+SVPS L+KAGL++NSFS+CF+++DSG +FFGDQG ATQQ+T FLP KY+ Y VGVE+
Sbjct: 232 ISVPSFLSKAGLVKNSFSLCFNDDDSGRIFFGDQGLATQQTTLFLPSDGKYETYIVGVEA 291
Query: 321 YCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380
CIG+SC+ Q+ F+ALVDSGASFTFLP E Y VV +FDK V++ R S +G W+YCY +
Sbjct: 292 CCIGSSCIKQTSFRALVDSGASFTFLPDESYRNVVDEFDKQVNATRFSFEGYPWEYCYKS 351
Query: 381 SSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMG 440
SS+E+LK P + L F+ N SFVV N +F +G FCL + DGD GI+GQNFM G
Sbjct: 352 SSKELLKNPSVILKFALNNSFVVHNPVFVVHGYQGVVGFCLAIQPADGDIGILGQNFMTG 411
Query: 441 HRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPS 500
+R+VFDRENLKL WS S C+++ D + L P P + PNPLP EQQ+T +G P+
Sbjct: 412 YRMVFDRENLKLGWSRSNCQDLTDGERMPLTPSPNDRPPNPLPANEQQNTHSGHTIT-PA 470
Query: 501 TAKTAPSKSIAASAQ 515
A APS AAS Q
Sbjct: 471 VAGRAPSNPSAASTQ 485
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551638|ref|XP_003544181.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/497 (55%), Positives = 364/497 (73%), Gaps = 14/497 (2%)
Query: 16 LDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVA-DSWPKKNSVEYLELLLSNDWKRQK 74
++G+ V+FSS+L+HRFS+EAK S+ + SV +WP++NS EY LLL +D RQ+
Sbjct: 17 MEGAVGVTFSSRLIHRFSEEAKAHLASRGSDGSVLLQAWPERNSSEYFRLLLRSDVTRQR 76
Query: 75 TRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLL 134
R+ S+ ++L+P EG QT FGN YWLHYTWIDIGTPNVSFLVALDAGS++L
Sbjct: 77 MRL-------GSQYEMLYPFEGGQTFLFGNALYWLHYTWIDIGTPNVSFLVALDAGSDML 129
Query: 135 WVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPY 194
WVPC CI+CA LSA Y LDR+L++Y PS S++S+++ C H LC S CK KDPCPY
Sbjct: 130 WVPCDCIECASLSAGNYNVLDRDLNQYRPSLSNTSRHLPCGHKLCDVHSVCKGSKDPCPY 189
Query: 195 IADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVM 254
YS+ +TSSSGY+ +D LHL S KHA Q+SVQ+S+I+GCGRKQTG YL GA PDGV+
Sbjct: 190 AVQYSSANTSSSGYVFEDKLHLTSNGKHAEQNSVQASIILGCGRKQTGEYLRGAGPDGVL 249
Query: 255 GLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAY 314
GLG G++SVPSLLAKAGLIQNSFSICF+EN+SG + FGDQG TQ ST FLPI K++AY
Sbjct: 250 GLGPGNISVPSLLAKAGLIQNSFSICFEENESGRIIFGDQGHVTQHSTPFLPIDGKFNAY 309
Query: 315 FVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSW 374
VGVES+C+G+ CL ++ FQAL+DSG+SFTFLP E+Y +VV++FDK V++ I LQ NSW
Sbjct: 310 IVGVESFCVGSLCLKETRFQALIDSGSSFTFLPNEVYQKVVIEFDKQVNATSIVLQ-NSW 368
Query: 375 KYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIG 434
+YCYNASS+E++ +P + L FS+NQ+++++N IF P ++ +T+FCL V +D DY IG
Sbjct: 369 EYCYNASSQELISIPPLNLAFSRNQTYLIQNPIFIDPASQEYTIFCLPVSPSDDDYAAIG 428
Query: 435 QNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQ 494
QNF+MG+R+VFDRENL+ +WS C++ S P + SPNPLP +QQS N
Sbjct: 429 QNFLMGYRMVFDRENLRFSWSRWNCQDRASFS-----SPYSVGSPNPLPVDQQQSFPNAH 483
Query: 495 AAAPPSTAKTAPSKSIA 511
P T+P S A
Sbjct: 484 GIPPAIAGHTSPKPSAA 500
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356548395|ref|XP_003542587.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/522 (54%), Positives = 369/522 (70%), Gaps = 22/522 (4%)
Query: 16 LDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVA-DSWPKKNSVEYLELLLSNDWKRQK 74
++G+ +FSS+L+HRFS+EAK S+ SV +WP++NS EY LLL +D RQ+
Sbjct: 17 MEGAVGATFSSRLIHRFSEEAKAHLASRGNKSSVLLQAWPQRNSSEYFRLLLRSDVARQR 76
Query: 75 TRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLL 134
R+ S+ + L+PSEG QT FFGN YWLHYTWIDIGTPNVSFLVALDAGS++L
Sbjct: 77 MRL-------GSQYETLYPSEGGQTFFFGNALYWLHYTWIDIGTPNVSFLVALDAGSDML 129
Query: 135 WVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPY 194
WVPC CI+CA LSA Y LDR+L++Y PS S++S+++ C H LC S CK KDPCPY
Sbjct: 130 WVPCDCIECASLSAGNYNVLDRDLNQYRPSLSNTSRHLPCGHKLCDVHSFCKGSKDPCPY 189
Query: 195 IADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVM 254
Y++ +TSSSGY+ +D LHL S KHA Q+SVQ+S+I+GCGRKQTG YL GA PDGV+
Sbjct: 190 EVQYASANTSSSGYVFEDKLHLTSDGKHAEQNSVQASIILGCGRKQTGDYLHGAGPDGVL 249
Query: 255 GLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAY 314
GLG G++SVPSLLAKAGLIQNSFSIC DEN+SG + FGDQG TQ ST FLPI AY
Sbjct: 250 GLGPGNISVPSLLAKAGLIQNSFSICLDENESGRIIFGDQGHVTQHSTPFLPI----IAY 305
Query: 315 FVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSW 374
VGVES+C+G+ CL ++ FQAL+DSG+SFTFLP E+Y +VV +FDK V++ RI LQ +SW
Sbjct: 306 MVGVESFCVGSLCLKETRFQALIDSGSSFTFLPNEVYQKVVTEFDKQVNASRIVLQ-SSW 364
Query: 375 KYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFP--ENEGFTVFCLTVMSTDGDYGI 432
+YCYNASS+E++ +P ++L FS+NQ+F+++N IF P + + +T+FCL V + DY
Sbjct: 365 EYCYNASSQELVNIPPLKLAFSRNQTFLIQNPIFYDPASQEQEYTIFCLPVSPSADDYAA 424
Query: 433 IGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSN 492
IGQNF+MG+R+VFDRENL+ WS C++ P G SPNPLP +QQ+ N
Sbjct: 425 IGQNFLMGYRLVFDRENLRFGWSRWNCQD-----RASFTSPSNGGSPNPLPANQQQTVPN 479
Query: 493 GQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSLLVLMCLL 534
+ P T+P S A L + R + + L+L+C L
Sbjct: 480 ARGVPPAIAGHTSPKPSAATPG--LVTTSRHSLASLLLICHL 519
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445106|ref|XP_004140314.1| PREDICTED: aspartic proteinase-like protein 1-like [Cucumis sativus] gi|449479851|ref|XP_004155727.1| PREDICTED: aspartic proteinase-like protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/510 (53%), Positives = 367/510 (71%), Gaps = 22/510 (4%)
Query: 1 MVNLVAICMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISK-SGNVSVADSWPKKNSV 59
M N + + + ++ S A++ S LVHRFSDEAK W S+ +GNVS A WP NS+
Sbjct: 1 MANCALLLLFIASLFVNCSLALTLSLNLVHRFSDEAKSLWESRRTGNVS-AKFWPPTNSL 59
Query: 60 EYLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTP 119
+Y ++L+ D KR++ + S+ +LFPSEGSQ FFGN+F WLHYTWID+GTP
Sbjct: 60 KYFQMLMDYDLKRRRLNI-------GSKYDVLFPSEGSQVIFFGNEFNWLHYTWIDLGTP 112
Query: 120 NVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179
+V FLVALD GS+LLWVPC CIQCAPLSA+YY+ LDR+LSEY+P+ SS+SK++ C H LC
Sbjct: 113 SVPFLVALDVGSDLLWVPCDCIQCAPLSANYYSVLDRDLSEYNPALSSTSKHLFCGHQLC 172
Query: 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK 239
++CKS DPC Y DY +++TS+SG++++D L L SFSKH S +Q+SV+ GCGRK
Sbjct: 173 AWSTTCKSANDPCTYKRDYYSDNTSTSGFMIEDKLQLTSFSKHGTHSLLQASVVFGCGRK 232
Query: 240 QTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ 299
Q+GSYLDGAAPDGVMGLG G++SVP+LLA+ GL++N+FS+CFD N SG + FGD GPATQ
Sbjct: 233 QSGSYLDGAAPDGVMGLGPGNISVPTLLAQEGLVRNTFSLCFDNNGSGRILFGDDGPATQ 292
Query: 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFD 359
Q+T FLP+ ++ AYF+GVES+C+G+SCL +SGFQALVDSG+SFT+LP E+Y ++V +FD
Sbjct: 293 QTTQFLPLFGEFAAYFIGVESFCVGSSCLQRSGFQALVDSGSSFTYLPAEVYKKIVFEFD 352
Query: 360 KL--VSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFT 417
K V++ RI L+ W YCYN S+ +P M+L+F NQ F + + ++ P N+G+
Sbjct: 353 KQVKVNATRIVLRELPWNYCYNISTLVSFNIPSMQLVFPLNQIF-IHDPVYVLPANQGYK 411
Query: 418 VFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPP--- 474
VFCLT+ TD DYG+IGQN M+G+R+VFDRENLKL WS SKC ++ + H PP
Sbjct: 412 VFCLTLEETDEDYGVIGQNLMVGYRMVFDRENLKLGWSKSKCLDINSSTTEHAKPPSNNG 471
Query: 475 AGQSPNPLPTTEQQSTSNGQAAAPPSTAKT 504
+SP LP T +Q A P+ A+T
Sbjct: 472 NAKSPIALPPTNRQ-------AIAPTAART 494
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | ||||||
| TAIR|locus:2184138 | 528 | AT5G10080 [Arabidopsis thalian | 0.923 | 0.941 | 0.460 | 8.5e-120 | |
| TAIR|locus:2125324 | 524 | AT4G35880 [Arabidopsis thalian | 0.788 | 0.809 | 0.342 | 8.2e-67 | |
| TAIR|locus:2827921 | 513 | AT2G17760 [Arabidopsis thalian | 0.810 | 0.849 | 0.327 | 1.9e-58 | |
| TAIR|locus:2080903 | 529 | AT3G51330 [Arabidopsis thalian | 0.855 | 0.869 | 0.319 | 4.8e-58 | |
| TAIR|locus:2080913 | 528 | AT3G51350 [Arabidopsis thalian | 0.526 | 0.535 | 0.354 | 6.1e-54 | |
| TAIR|locus:2080973 | 488 | AT3G51360 [Arabidopsis thalian | 0.529 | 0.584 | 0.313 | 1.8e-48 | |
| TAIR|locus:2080908 | 530 | AT3G51340 [Arabidopsis thalian | 0.825 | 0.837 | 0.317 | 1.2e-47 | |
| TAIR|locus:2198753 | 485 | AT1G05840 [Arabidopsis thalian | 0.684 | 0.758 | 0.265 | 1.8e-27 | |
| TAIR|locus:2075512 | 488 | AT3G02740 [Arabidopsis thalian | 0.633 | 0.698 | 0.256 | 2e-27 | |
| TAIR|locus:2083098 | 632 | AT3G50050 [Arabidopsis thalian | 0.548 | 0.466 | 0.276 | 1.3e-25 |
| TAIR|locus:2184138 AT5G10080 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 241/523 (46%), Positives = 326/523 (62%)
Query: 8 CMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLS 67
C+LF + + + A FSS+L+HRFSDE + + S +DS P K S+EY LL
Sbjct: 11 CVLF--LATEETLASLFSSRLIHRFSDEGR----ASIKTPSSSDSLPNKQSLEYYRLLAE 64
Query: 68 NDWKRQKTRVKXXXXXXXXXXXXXFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVAL 127
+D++RQ+ + PSEGS+T GN F WLHYTWIDIGTP+VSFLVAL
Sbjct: 65 SDFRRQRMNL-------GAKVQSLVPSEGSKTISSGNDFGWLHYTWIDIGTPSVSFLVAL 117
Query: 128 DAGSNLLWVPCQCIQCAPLSASYYTSL-DRNLXXXXXXXXXXXXXXXXXHPXXXXXXXXX 186
D GSNLLW+PC C+QCAPL+++YY+SL ++L H
Sbjct: 118 DTGSNLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLCDSASDCE 177
Query: 187 XXXDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRKQTGS 243
+ CPY +Y + +TSSSG LV+DILHL + + SSV++ V+IGCG+KQ+G
Sbjct: 178 SPKEQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGD 237
Query: 244 YLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTS 303
YLDG APDG+MGLG ++SVPS L+KAGL++NSFS+CFDE DSG ++FGD GP+ QQST
Sbjct: 238 YLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTP 297
Query: 304 FLPI-GEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLV 362
FL + KY Y VGVE+ CIGNSCL Q+ F +DSG SFT+LP EIY +V ++ D+ +
Sbjct: 298 FLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHI 357
Query: 363 SSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLT 422
++ + +G SW+YCY +S+E KVP ++L FS N +FV+ +F F +++G FCL
Sbjct: 358 NATSKNFEGVSWEYCYESSAEP--KVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLP 415
Query: 423 VMSTDGDYGI--IGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPN 480
+ S G GI IGQN+M G+R+VFDREN+KL WS SKC+E DK P + SPN
Sbjct: 416 I-SPSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGSTSSPN 472
Query: 481 PLPTTEQQSTSNGQXXXXXXXXXXXXXXXIAASAQQLDSVLRV 523
PLPT EQQS G ++S+ S++R+
Sbjct: 473 PLPTDEQQSRG-GHAVSPAIAGKTPSKTPSSSSSYSFSSIMRL 514
|
|
| TAIR|locus:2125324 AT4G35880 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 151/441 (34%), Positives = 230/441 (52%)
Query: 24 FSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKXXXXX 83
F+ ++ HRFSDE K+ W +G + +P K S EY L+ DW + R+
Sbjct: 29 FTFEMHHRFSDEVKQ-WSDSTGRFA---KFPPKGSFEYFNALVLRDWLIRGRRLSESESE 84
Query: 84 XXXXXXXXFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQC 143
S+G+ T + + LHYT + +GTP + F+VALD GS+L WVPC C +C
Sbjct: 85 SESSLTF---SDGNSTSRISSLGF-LHYTTVKLGTPGMRFMVALDTGSDLFWVPCDCGKC 140
Query: 144 APLSASYYTSLDRNLXXXXXXXXXXXXXXXXXHPXXXXXXXXXXXXDPCPYIADYSTEDT 203
AP + Y S + L + CPY+ Y + T
Sbjct: 141 APTEGATYAS-EFELSIYNPKVSTTNKKVTCNNSLCAQRNQCLGTFSTCPYMVSYVSAQT 199
Query: 204 SSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV 263
S+SG L++D++HL + K+ P+ V++ V GCG+ Q+GS+LD AAP+G+ GLG+ +SV
Sbjct: 200 STSGILMEDVMHLTTEDKN-PER-VEAYVTFGCGQVQSGSFLDIAAPNGLFGLGMEKISV 257
Query: 264 PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCI 323
PS+LA+ GL+ +SFS+CF + G + FGD+G + Q+ T F + + Y + V +
Sbjct: 258 PSVLAREGLVADSFSMCFGHDGVGRISFGDKGSSDQEETPF-NLNPSHPNYNITVTRVRV 316
Query: 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGN-SWKYCYNASS 382
G + L F AL D+G SFT+L +Y V F KR S ++YCY+ S+
Sbjct: 317 GTT-LIDDEFTALFDTGTSFTYLVDPMYTTVSESFHSQAQDKRHSPDSRIPFEYCYDMSN 375
Query: 383 EEMLK-VPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGH 441
+ +P + L N F + + I EG V+CL ++ + + IIGQN+M G+
Sbjct: 376 DANASLIPSLSLTMKGNSHFTINDPIIVI-STEGELVYCLAIVKSS-ELNIIGQNYMTGY 433
Query: 442 RIVFDRENLKLAWSHSKCEEV 462
R+VFDRE L LAW C ++
Sbjct: 434 RVVFDREKLVLAWKKFDCYDI 454
|
|
| TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 149/455 (32%), Positives = 222/455 (48%)
Query: 9 MLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSN 68
+ G ++L S V + F E R+ + V D P ++S +Y ++
Sbjct: 10 LFLGLLILLASSWVLDRCEGFGEFGFEFHHRFSDQVVGVLPGDGLPNRDSSKYYRVMAHR 69
Query: 69 DWKRQKTRVKXXXXXXXXXXXXXFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALD 128
D ++ F S+G++T + +LHY + +GTP+ F+VALD
Sbjct: 70 D-----RLIRGRRLANEDQSLVTF-SDGNETVRV-DALGFLHYANVTVGTPSDWFMVALD 122
Query: 129 AGSNLLWVPCQCIQCA-PLSASYYTSLDRNLXXXXXXXXXXXXXXXXXHPXXXXXXXXXX 187
GS+L W+PC C C L A +SLD N+
Sbjct: 123 TGSDLFWLPCDCTNCVRELKAPGGSSLDLNIYSPNASSTSTKVPCNST--LCTRGDRCAS 180
Query: 188 XXDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDG 247
CPY Y + TSS+G LV+D+LHL S K + ++ + V GCG+ QTG + DG
Sbjct: 181 PESDCPYQIRYLSNGTSSTGVLVEDVLHLVSNDKSS--KAIPARVTFGCGQVQTGVFHDG 238
Query: 248 AAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPI 307
AAP+G+ GLGL D+SVPS+LAK G+ NSFS+CF + +G + FGD+G Q+ T L I
Sbjct: 239 AAPNGLFGLGLEDISVPSVLAKEGIAANSFSMCFGNDGAGRISFGDKGSVDQRETP-LNI 297
Query: 308 GEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRI 367
+ + Y + V +G + F A+ DSG SFT+L Y + F+ L KR
Sbjct: 298 RQPHPTYNITVTKISVGGNT-GDLEFDAVFDSGTSFTYLTDAAYTLISESFNSLALDKRY 356
Query: 368 SLQGNS--WKYCYNAS-SEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM 424
+ ++YCY S +++ + P + L S+ V + + P + V+CL +M
Sbjct: 357 QTTDSELPFEYCYALSPNKDSFQYPAVNLTMKGGSSYPVYHPLVVIPMKDT-DVYCLAIM 415
Query: 425 STDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459
+ D IIGQNFM G+R+VFDRE L L W S C
Sbjct: 416 KIE-DISIIGQNFMTGYRVVFDREKLILGWKESDC 449
|
|
| TAIR|locus:2080903 AT3G51330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 573 (206.8 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 157/491 (31%), Positives = 233/491 (47%)
Query: 5 VAICMLFGCILLDGSDAVS-FSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLE 63
V + +L C L+ +A FS ++ H FSD K+ ++ + D P+K S+EY +
Sbjct: 9 VLLSLLVVCWGLERCEASGKFSFEVHHMFSDRVKQ-------SLGLDDLVPEKGSLEYFK 61
Query: 64 LLLSNDWKRQKTRVKXXXXXXXXXXXXXFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSF 123
+L D + R + G++T + +LHY + +GTP F
Sbjct: 62 VLAQRD---RLIRGRGLASNNEETPITFM--RGNRTISI-DLLGFLHYANVSVGTPATWF 115
Query: 124 LVALDAGSNLLWVPCQC-IQCAPLSASYYTSLDRNLXXXXXXXXXXXXXXXXXHPXXXXX 182
LVALD GS+L W+PC C C S R L
Sbjct: 116 LVALDTGSDLFWLPCNCGSTCIRDLKEVGLSQSRPLNLYSPNTSSTSSSIRCSDDRCFGS 175
Query: 183 XXXXXXXDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG 242
CPY Y ++DT ++G L +D+LHL + + V++++ +GCG+ QTG
Sbjct: 176 SRCSSPASSCPYQIQYLSKDTFTTGTLFEDVLHLVTEDEGL--EPVKANITLGCGKNQTG 233
Query: 243 SYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPATQQ 300
AA +G++GLGL D SVPS+LAKA + NSFS+CF + G + FGD+G Q
Sbjct: 234 FLQSSAAVNGLLGLGLKDYSVPSILAKAKITANSFSMCFGNIIDVVGRISFGDKGYTDQM 293
Query: 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ--ALVDSGASFTFLPTEIYAEVVVKF 358
T LP E Y V V +G + G Q AL D+G SFT L Y + F
Sbjct: 294 ETPLLPT-EPSPTYAVSVTEVSVGGDAV---GVQLLALFDTGTSFTHLLEPEYGLITKAF 349
Query: 359 DKLVSSKRISLQGN-SWKYCYNAS-SEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGF 416
D V+ KR + +++CY+ S ++ + P + + F +RN +F +
Sbjct: 350 DDHVTDKRRPIDPELPFEFCYDLSPNKTTILFPRVAMTFEGGSQMFLRNPLFIVWNEDNS 409
Query: 417 TVFCLTVM-STDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPA 475
++CL ++ S D IIGQNFM G+RIVFDRE + L W S C E D+S PPP
Sbjct: 410 AMYCLGILKSVDFKINIIGQNFMSGYRIVFDRERMILGWKRSDCFE--DESLESTTPPPP 467
Query: 476 G-QSPNPLPTT 485
++P+P +T
Sbjct: 468 ETEAPSPSAST 478
|
|
| TAIR|locus:2080913 AT3G51350 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 448 (162.8 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 105/296 (35%), Positives = 162/296 (54%)
Query: 192 CPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPD 251
CPY YS T + G L+ D+LHLA+ ++ + V+++V +GCG+KQTG + + +
Sbjct: 185 CPYQISYSNS-TGTKGTLLQDVLHLATEDENL--TPVKANVTLGCGQKQTGLFQRNNSVN 241
Query: 252 GVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPATQQSTSFLPIGE 309
GV+GLG+ SVPSLLAKA + NSFS+CF + G + FGD+G Q+ T F+ +
Sbjct: 242 GVLGLGIKGYSVPSLLAKANITANSFSMCFGRVIGNVGRISFGDRGYTDQEETPFISVAP 301
Query: 310 KYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISL 369
AY V + + + F A D+G+SFT L Y + FD+LV +R +
Sbjct: 302 S-TAYGVNISGVSVAGDPVDIRLF-AKFDTGSSFTHLREPAYGVLTKSFDELVEDRRRPV 359
Query: 370 QGN-SWKYCYNAS-SEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTD 427
+++CY+ S + ++ P + + F ++ N F+ EG ++CL V+ +
Sbjct: 360 DPELPFEFCYDLSPNATTIQFPLVEMTFIGGSKIILNNPFFTARTQEGNVMYCLGVLKSV 419
Query: 428 G-DYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAG-QSPNP 481
G +IGQNF+ G+RIVFDRE + L W S C E D+S PPP ++P P
Sbjct: 420 GLKINVIGQNFVAGYRIVFDRERMILGWKQSLCFE--DESLESTTPPPPEVEAPAP 473
|
|
| TAIR|locus:2080973 AT3G51360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 94/300 (31%), Positives = 155/300 (51%)
Query: 192 CPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPD 251
CPY Y + + S+G LV+D++H+++ A + + GC Q G + + A +
Sbjct: 171 CPYRIRYLSPGSKSTGVLVEDVIHMSTEEGEARDARIT----FGCSESQLGLFKE-VAVN 225
Query: 252 GVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFL-PIGEK 310
G+MGL + D++VP++L KAG+ +SFS+CF N G++ FGD+G + Q T I
Sbjct: 226 GIMGLAIADIAVPNMLVKAGVASDSFSMCFGPNGKGTISFGDKGSSDQLETPLSGTISPM 285
Query: 311 YDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ 370
+ Y V + + +G + + F A DSG + T+L Y + F V +R+S
Sbjct: 286 F--YDVSITKFKVGKVTV-DTEFTATFDSGTAVTWLIEPYYTALTTNFHLSVPDRRLSKS 342
Query: 371 GNS-WKYCY--NASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEG-FTVFCLTVMS- 425
+S +++CY ++S+E K+P + ++ V + I F ++G F V+CL V+
Sbjct: 343 VDSPFEFCYIITSTSDED-KLPSVSFEMKGGAAYDVFSPILVFDTSDGSFQVYCLAVLKQ 401
Query: 426 TDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTT 485
+ D+ IIGQNFM +RIV DRE L W S C + + + P +P P T
Sbjct: 402 VNADFSIIGQNFMTNYRIVHDRERRILGWKKSNCNDTNGFTGPTALAKPPSMAPTSSPRT 461
|
|
| TAIR|locus:2080908 AT3G51340 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 154/485 (31%), Positives = 222/485 (45%)
Query: 24 FSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKXXXXX 83
FS ++ H FSD K+ + D P+ S+EY ++L D R
Sbjct: 30 FSFEVHHMFSDVVKQ-------TLGFDDLVPENGSLEYFKVLAHRD------RFIRGRGL 76
Query: 84 XXXXXXXXFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQC-IQ 142
S GS N +LHY + +GTP FLVALD GS+L W+PC C
Sbjct: 77 ASNNEETPLTSIGSNLTLALNFLGFLHYANVSLGTPATWFLVALDTGSDLFWLPCNCGTT 136
Query: 143 CAP--LSASYYTSLDRNLXXXXXXXXXXXXXXXXXHPXXXXXXXXXXXXDPCPYIADYST 200
C A + S+ NL CPY S+
Sbjct: 137 CIHDLKDARFSESVPLNLYTPNASTTSSSIRCSDKRCFGSGKCSSPESI--CPYQIALSS 194
Query: 201 EDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260
+T ++G L+ D+LHL + + V ++V +GCG+ QTG++ A +GV+GL + +
Sbjct: 195 -NTVTTGTLLQDVLHLVTEDEDL--KPVNANVTLGCGQNQTGAFQTDIAVNGVLGLSMKE 251
Query: 261 VSVPSLLAKAGLIQNSFSICFDENDS--GSVFFGDQGPATQQSTSFLPIGEKYDAYFVGV 318
SVPSLLAKA + NSFS+CF S G + FGD+G Q+ T + + E AY V V
Sbjct: 252 YSVPSLLAKANITANSFSMCFGRIISVVGRISFGDKGYTDQEETPLVSL-ETSTAYGVNV 310
Query: 319 ESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGN-SWKYC 377
+G + F AL D+G+SFT L Y FD L+ KR + + +++C
Sbjct: 311 TGVSVGGVPVDVPLF-ALFDTGSSFTLLLESAYGVFTKAFDDLMEDKRRPVDPDFPFEFC 369
Query: 378 YNASSEEMLKVPDMRLIFSK-----NQSFV--VRN---HIFSFPENEGFTVFCLTVMSTD 427
Y+ E + R + SK F ++N S+ NEG ++CL ++ +
Sbjct: 370 YDLREEHLNSDARPRHMQSKCYNPCRDDFRWRIQNDSQESVSY-SNEGTKMYCLGILKSI 428
Query: 428 GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAG-QSPNPLPTTE 486
+ IIGQN M GHRIVFDRE + L W S C E D+S PPP ++P P +T
Sbjct: 429 -NLNIIGQNLMSGHRIVFDRERMILGWKQSNCFE--DESLASESPPPPEIEAPPPSVSTP 485
Query: 487 QQSTS 491
+ S
Sbjct: 486 PPAAS 490
|
|
| TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 106/400 (26%), Positives = 174/400 (43%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLXXXXXXXXX 167
L+Y I IGTP S+ V +D GS+++WV C QC QC P ++ L
Sbjct: 79 LYYAKIGIGTPAKSYYVQVDTGSDIMWVNCIQCKQC-PRRSTLGIELTLYNIDESDSGKL 137
Query: 168 XXXXXXXXHPXXXXXXXXXXXXDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ CPY+ Y + +S++GY V D++ S + +
Sbjct: 138 VSCDDDFCYQISGGPLSGCKANMSCPYLEIYG-DGSSTAGYFVKDVVQYDSVAGDLKTQT 196
Query: 228 VQSSVIIGCGRKQTGSYLDGA---APDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDEN 284
SVI GCG +Q+G LD + A DG++G G + S+ S LA +G ++ F+ C D
Sbjct: 197 ANGSVIFGCGARQSGD-LDSSNEEALDGILGFGKANSSMISQLASSGRVKKIFAHCLDGR 255
Query: 285 DSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLT------QSGFQ--AL 336
+ G +F G Q + P+ Y V + + +G LT Q G + A+
Sbjct: 256 NGGGIFA--IGRVVQPKVNMTPLVPNQPHYNVNMTAVQVGQEFLTIPADLFQPGDRKGAI 313
Query: 337 VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFS 396
+DSG + +LP IY +V K + ++ + +K C+ S P++ F
Sbjct: 314 IDSGTTLAYLPEIIYEPLVKKITSQEPALKVHIVDKDYK-CFQYSGRVDEGFPNVTFHFE 372
Query: 397 KNQSFVVRNHIFSFPENEGFTVFCL-----TVMSTDG-DYGIIGQNFMMGHRIVFDRENL 450
+ V H + FP +EG ++C+ + S D + ++G + +++D EN
Sbjct: 373 NSVFLRVYPHDYLFP-HEG--MWCIGWQNSAMQSRDRRNMTLLGDLVLSNKLVLYDLENQ 429
Query: 451 KLAWSHSKCEEVI---DKSH--VHLVPPPAGQSPNPLPTT 485
+ W+ C I D+ VHLV S PL T+
Sbjct: 430 LIGWTEYNCSSSIKVKDEGTGTVHLVGSHFISSALPLDTS 469
|
|
| TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 94/366 (25%), Positives = 165/366 (45%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLXXXXXXXXX 167
L++ I +GTP+ F V +D GS++LWV C CI+C P + ++
Sbjct: 84 LYFAKIGLGTPSRDFHVQVDTGSDILWVNCAGCIRC-PRKSDLVELTPYDVDASSTAKSV 142
Query: 168 XXXXXXXXHPXXXXXXXXXXXXDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ C Y+ Y + +S++GYLV D++HL + + S
Sbjct: 143 SCSDNFCSYVNQRSECHSGST---CQYVIMYG-DGSSTNGYLVKDVVHLDLVTGNRQTGS 198
Query: 228 VQSSVIIGCGRKQTGSYLDG-AAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDS 286
++I GCG KQ+G + AA DG+MG G + S S LA G ++ SF+ C D N+
Sbjct: 199 TNGTIIFGCGSKQSGQLGESQAAVDGIMGFGQSNSSFISQLASQGKVKRSFAHCLDNNNG 258
Query: 287 GSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCL--TQSGFQA------LVD 338
G +F G P+ K Y V + + +GNS L + + F + ++D
Sbjct: 259 GGIFA--IGEVVSPKVKTTPMLSKSAHYSVNLNAIEVGNSVLELSSNAFDSGDDKGVIID 316
Query: 339 SGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKY-CYNASSEEMLKVPDMRLIFSK 397
SG + +LP +Y ++ + L S ++L + C++ + +++ + P + F K
Sbjct: 317 SGTTLVYLPDAVYNPLLNEI--LASHPELTLHTVQESFTCFHYT-DKLDRFPTVTFQFDK 373
Query: 398 NQSFVV--RNHIFSFPENEGFTVFCLTVMSTDGDYG--IIGQNFMMGHRIVFDRENLKLA 453
+ S V R ++F E+ + + T G I+G + +V+D EN +
Sbjct: 374 SVSLAVYPREYLFQVREDTWCFGWQNGGLQTKGGASLTILGDMALSNKLVVYDIENQVIG 433
Query: 454 WSHSKC 459
W++ C
Sbjct: 434 WTNHNC 439
|
|
| TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 282 (104.3 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 88/318 (27%), Positives = 150/318 (47%)
Query: 190 DPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAA 249
+ C Y +Y+ E +SS G L +D++ + S+ PQ +V GC +TG A
Sbjct: 159 EQCVYEREYA-EHSSSKGVLGEDLISFGNESQLTPQRAV-----FGCETVETGDLYSQRA 212
Query: 250 PDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDEND--SGSVFFGD-QGPATQQSTSFLP 306
DG++GLG GD+S+ L GLI NSF +C+ D GS+ G P+ T P
Sbjct: 213 -DGIIGLGQGDLSLVDQLVDKGLISNSFGLCYGGMDVGGGSMILGGFDYPSDMVFTDSDP 271
Query: 307 IGEKY---DAYFVGVESYCIG-NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLV 362
Y D + V + +S + A++DSG ++ +LP +A + V
Sbjct: 272 DRSPYYNIDLTGIRVAGKQLSLHSRVFDGEHGAVLDSGTTYAYLPDAAFAAFEEAVMREV 331
Query: 363 SS-KRISLQGNSWK-YCYNASSE----EMLKV-PDMRLIFSKNQSFVVRNHIFSFPENEG 415
S+ K+I ++K C+ ++ E+ K+ P + ++F QS+++ + F ++
Sbjct: 332 STLKQIDGPDPNFKDTCFQVAASNYVSELSKIFPSVEMVFKSGQSWLLSPENYMFRHSKV 391
Query: 416 FTVFCLTVMSTDGDYG-IIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPP 474
+CL V D+ ++G + +V+DREN K+ + + C E+ D+ H+ PPP
Sbjct: 392 HGAYCLGVFPNGKDHTTLLGGIVVRNTLVVYDRENSKVGFWRTNCSELSDRLHIDGAPPP 451
Query: 475 AGQSPNPLPTTEQQSTSN 492
A N S+SN
Sbjct: 452 ATLPSND-SNPSHNSSSN 468
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LX20 | ASPL1_ARATH | 3, ., 4, ., 2, 3, ., - | 0.5199 | 0.8847 | 0.9015 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.23 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 538 | |||
| cd05471 | 283 | cd05471, pepsin_like, Pepsin-like aspartic proteas | 5e-30 | |
| cd05476 | 265 | cd05476, pepsin_A_like_plant, Chroloplast Nucleoid | 3e-28 | |
| cd05475 | 273 | cd05475, nucellin_like, Nucellins, plant aspartic | 4e-25 | |
| cd06096 | 326 | cd06096, Plasmepsin_5, Plasmepsins are a class of | 4e-23 | |
| PLN03146 | 431 | PLN03146, PLN03146, aspartyl protease family prote | 1e-21 | |
| cd05472 | 299 | cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin | 5e-20 | |
| pfam00026 | 316 | pfam00026, Asp, Eukaryotic aspartyl protease | 2e-18 | |
| cd05489 | 362 | cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit | 1e-09 | |
| cd05474 | 295 | cd05474, SAP_like, SAPs, pepsin-like proteinases s | 2e-09 | |
| cd06098 | 317 | cd06098, phytepsin, Phytepsin, a plant homolog of | 5e-09 | |
| cd05490 | 325 | cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family | 1e-08 | |
| cd05488 | 320 | cd05488, Proteinase_A_fungi, Fungal Proteinase A , | 5e-08 | |
| cd05470 | 109 | cd05470, pepsin_retropepsin_like, Cellular and ret | 4e-07 | |
| cd05478 | 317 | cd05478, pepsin_A, Pepsin A, aspartic protease pro | 2e-06 | |
| cd05477 | 318 | cd05477, gastricsin, Gastricsins, asparate proteas | 3e-06 | |
| cd06097 | 278 | cd06097, Aspergillopepsin_like, Aspergillopepsin_l | 4e-06 | |
| cd05485 | 329 | cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi | 6e-05 | |
| cd05487 | 326 | cd05487, renin_like, Renin stimulates production o | 1e-04 | |
| PTZ00165 | 482 | PTZ00165, PTZ00165, aspartyl protease; Provisional | 6e-04 |
| >gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 5e-30
Identities = 74/353 (20%), Positives = 112/353 (31%), Gaps = 98/353 (27%)
Query: 114 IDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173
I IGTP F V D GS+LLWVP S+ +S
Sbjct: 5 ITIGTPPQKFSVIFDTGSSLLWVPS-------------------------SNCTSCSCQK 39
Query: 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVI 233
S S C + Y D S +G L D + + + +
Sbjct: 40 HPRFKYDSSKSSTYKDTGCTFSITYG--DGSVTGGLGTDTVTIGGLTI--------PNQT 89
Query: 234 IGCGRKQTGSYLDGAAPDGVMGLGLGD------VSVPSLLAKAGLI-QNSFSICF----D 282
GC ++G + DG++GLG S L GLI FS D
Sbjct: 90 FGCATSESGDFSSSGF-DGILGLGFPSLSVDGVPSFFDQLKSQGLISSPVFSFYLGRDGD 148
Query: 283 ENDSGSVFFGDQGPATQQS----TSFLPIGEKYDAYFVGVESYCIGNSCLTQ--SGFQAL 336
+ G + FG P+ T + G Y + V ++ +G + G A+
Sbjct: 149 GGNGGELTFGGIDPSKYTGDLTYTPVVSNGPGY--WQVPLDGISVGGKSVISSSGGGGAI 206
Query: 337 VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFS 396
VDSG S +LP+ +Y ++ K + +S Y +PD+
Sbjct: 207 VDSGTSLIYLPSSVYDAIL---------KALGAAVSSSDGGYGVDCSPCDTLPDI----- 252
Query: 397 KNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 449
+F I+G F+ + VFD +N
Sbjct: 253 ---TF----TFLW----------------------ILGDVFLRNYYTVFDLDN 276
|
Pepsin-like aspartic proteases are found in mammals, plants, fungi and bacteria. These well known and extensively characterized enzymes include pepsins, chymosin, renin, cathepsins, and fungal aspartic proteases. Several have long been known to be medically (renin, cathepsin D and E, pepsin) or commercially (chymosin) important. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Aspartate residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. Most members of the pepsin family specifically cleave bonds in peptides that are at least six residues in length, with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap.The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 283 |
| >gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-28
Identities = 79/366 (21%), Positives = 115/366 (31%), Gaps = 130/366 (35%)
Query: 116 IGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175
IGTP F + +D GS+L W C
Sbjct: 8 IGTPPQPFSLIVDTGSDLTWTQC------------------------------------- 30
Query: 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIG 235
C Y Y + +S+SG L + SV + V G
Sbjct: 31 ----------------CSYEYSYG-DGSSTSGVLATETFTFGD-----SSVSVPN-VAFG 67
Query: 236 CGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICF----DENDSGSVFF 291
CG G GA DG++GLG G +S+ S L G N FS C D S +
Sbjct: 68 CGTDNEGGSFGGA--DGILGLGRGPLSLVSQLGSTG---NKFSYCLVPHDDTGGSSPLIL 122
Query: 292 GD---QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCL--TQSGF--------QALVD 338
GD G + T + Y+V +E +G L S F ++D
Sbjct: 123 GDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIID 182
Query: 339 SGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKN 398
SG + T+LP Y ++ + FD
Sbjct: 183 SGTTLTYLPDPAYPDLTLHFD--------------------------------------- 203
Query: 399 QSFVVRNHIFSFPEN----EGFTVFCLTVM-STDGDYGIIGQNFMMGHRIVFDRENLKLA 453
+ PEN G V CL ++ S+ G I+G + +D EN +L
Sbjct: 204 ----GGADLELPPENYFVDVGEGVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLG 259
Query: 454 WSHSKC 459
++ + C
Sbjct: 260 FAPADC 265
|
This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265 |
| >gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 4e-25
Identities = 91/359 (25%), Positives = 137/359 (38%), Gaps = 95/359 (26%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSS 168
+Y I+IG P + + +D GS+L W+
Sbjct: 2 YYYVTINIGNPPKPYFLDIDTGSDLTWL-------------------------------- 29
Query: 169 SKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSS-GYLVDDILHLASFSKHAPQSS 227
C P C + C+ C Y +Y+ D SS G LV DI L K S
Sbjct: 30 ----QCDAP-C---TGCQ-----CDYEIEYA--DGGSSMGVLVTDIFSL----KLTNGSR 70
Query: 228 VQSSVIIGCGRKQTGSYLDGAAP-DGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDS 286
+ + GCG Q G L+ P DG++GLG G +S+PS LA G+I+N C N
Sbjct: 71 AKPRIAFGCGYDQQGPLLNPPPPTDGILGLGRGKISLPSQLASQGIIKNVIGHCLSSNGG 130
Query: 287 GSVFFGDQGPATQQSTSFLPIGEKYD-AYFVGVESYCIGNSCLTQSGFQALVDSGASFTF 345
G +FFGD + T E Y G S G + + DSG+S+T+
Sbjct: 131 GFLFFGDDLVPSSGVTWTPMRRESQKKHYSPGPASLLFNGQPTGGKGLEVVFDSGSSYTY 190
Query: 346 LPTEIYAEVVVKFDKLVSSKRISLQ-GNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404
+ Y F K ++L+ G W+ + + P+ LI S+
Sbjct: 191 FNAQAY------F------KPLTLKFGKGWR------TRLLEIPPENYLIISE------- 225
Query: 405 NHIFSFPENEGFTVFCLTVMS----TDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459
+G CL +++ G+ IIG M G +++D E ++ W S C
Sbjct: 226 ---------KGNV--CLGILNGSEIGLGNTNIIGDISMQGLMVIYDNEKQQIGWVRSDC 273
|
Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. Length = 273 |
| >gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 4e-23
Identities = 82/381 (21%), Positives = 136/381 (35%), Gaps = 90/381 (23%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSS 168
++ I IG P + LD GS+ L PC QC C ++ Y+ ++S +
Sbjct: 4 YFIDIFIGNPPQKQSLILDTGSSSLSFPCSQCKNCG-------IHMEPP---YNLNNSIT 53
Query: 169 SKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSV 228
S + C C SC L + C Y YS E +S SG+ D + S+ +
Sbjct: 54 SSILYCDCNKCCYCLSC--LNNKCEYSISYS-EGSSISGFYFSDFVSFESYLNSNSEKES 110
Query: 229 QSSVIIGCGRKQTGSYLDGAAPDGVMGLGL---GDVSVPSLL-------AKAGLIQNSFS 278
I GC +T +L A G++GL L + P +L K I FS
Sbjct: 111 FKK-IFGCHTHETNLFLTQQA-TGILGLSLTKNNGLPTPIILLFTKRPKLKKDKI---FS 165
Query: 279 ICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYD----------AYFVGVESYCIG---N 325
IC E+ G + G S + + Y+V +E + +
Sbjct: 166 ICLSEDG-GELTIGGYDKDYTVRNSSIGNNKVSKIVWTPITRKYYYYVKLEGLSVYGTTS 224
Query: 326 SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEM 385
+ G LVDSG++ + P ++Y ++ F
Sbjct: 225 NSGNTKGLGMLVDSGSTLSHFPEDLYNKINNFF--------------------------- 257
Query: 386 LKVPDMRLIFSKN-------QSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFM 438
P + +IF N S++ + F E + + I+G +F
Sbjct: 258 ---PTITIIFENNLKIDWKPSSYLYKKESFWCKGGE----------KSVSNKPILGASFF 304
Query: 439 MGHRIVFDRENLKLAWSHSKC 459
+I+FD +N ++ + S C
Sbjct: 305 KNKQIIFDLDNNRIGFVESNC 325
|
The family contains a group of aspartic proteinases homologous to plasmepsin 5. Plasmepsins are a class of at least 10 enzymes produced by the plasmodium parasite. Through their haemoglobin-degrading activity, they are an important cause of symptoms in malaria sufferers. This family of enzymes is a potential target for anti-malarial drugs. Plasmepsins are aspartic acid proteases, which means their active site contains two aspartic acid residues. These two aspartic acid residue act respectively as proton donor and proton acceptor, catalyzing the hydrolysis of peptide bond in proteins. Aspartic proteinases are composed of two structurally similar beta barrel lobes, each lobe contributing an aspartic acid residue to form a catalytic dyad that acts to cleave the substrate peptide bond. The catalytic Asp residues are contained in an Asp-Thr-Gly-Ser/thr motif in both N- and C-terminal lobes of the enzyme. There are four types of plasmepsins, closely related but varying in the specificity of cleavage site. The name plasmepsin may come from plasmodium (the organism) and pepsin (a common aspartic acid protease with similar molecular structure). This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 326 |
| >gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 1e-21
Identities = 118/491 (24%), Positives = 206/491 (41%), Gaps = 95/491 (19%)
Query: 1 MVNLVAICML-FGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSV 59
L+A+C+ F + + F+ L+HR S KS P N
Sbjct: 1 FSVLLALCLFSFSELSAAEAPKGGFTVDLIHRDS--------PKS---------PFYNPS 43
Query: 60 EYLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTP 119
E L N ++R +RV ++S N + + N I IGTP
Sbjct: 44 ETPSQRLRNAFRRSISRVNHFRPTDASPNDPQSDLISNGGEYLMN---------ISIGTP 94
Query: 120 NVSFLVALDAGSNLLWVPCQ-CIQC----APLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174
V L D GS+L+W C+ C C +PL +DP SS+ K+VSC
Sbjct: 95 PVPILAIADTGSDLIWTQCKPCDDCYKQVSPL--------------FDPKKSSTYKDVSC 140
Query: 175 SHPLCK--SRSSCKSLKDPCPYIADYSTEDTS-SSGYLVDDILHLASFSKHAPQSSVQ-S 230
C+ + S ++ C Y YS D S + G L + L + S S V
Sbjct: 141 DSSQCQALGNQASCSDENTCTY--SYSYGDGSFTKGNLAVETLTIGSTSG----RPVSFP 194
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICF-----DEND 285
++ GCG G++ + + G++GLG G +S+ S L + I FS C D N
Sbjct: 195 GIVFGCGHNNGGTFDEKGS--GIVGLGGGPLSLISQLGSS--IGGKFSYCLVPLSSDSNG 250
Query: 286 SGSVFFGDQ----GPATQQSTSFLPIG-EKYDAYFVGVESYCIGNSCLTQSGFQA----- 335
+ + FG G ST + + + Y++ +E+ +G+ L +G
Sbjct: 251 TSKINFGTNAIVSGSGV-VSTPLVSKDPDTF--YYLTLEAISVGSKKLPYTGSSKNGVEE 307
Query: 336 ---LVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392
++DSG + T LP++ Y+E+ ++ + +R+S CY+++S+ +K+P +
Sbjct: 308 GNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSD--IKLPIIT 365
Query: 393 LIFSKNQSFVVRNHIFSFPE-NEGFTVFCLTVMSTDGD--YGIIGQ-NFMMGHRIVFDRE 448
F + V + +F + +E + C ++ T +G + Q NF++G +D E
Sbjct: 366 AHF--TGADVKLQPLNTFVKVSED--LVCFAMIPTSSIAIFGNLAQMNFLVG----YDLE 417
Query: 449 NLKLAWSHSKC 459
+ +++ + C
Sbjct: 418 SKTVSFKPTDC 428
|
Length = 431 |
| >gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 5e-20
Identities = 93/365 (25%), Positives = 131/365 (35%), Gaps = 90/365 (24%)
Query: 114 IDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173
+ +GTP V +D GS+L WV QC P
Sbjct: 6 VGLGTPARDQTVIVDTGSDLTWV-----QCQP---------------------------- 32
Query: 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSS-GYLVDDILHLASFSKHAPQSSVQSSV 232
C C Y Y D S + G L D L L S S V
Sbjct: 33 -----------C------CLYQVSYG--DGSYTTGDLATDTLTLGS-------SDVVPGF 66
Query: 233 IIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSIC---FDENDSGSV 289
GCG G + GAA G++GLG G +S+PS A + FS C + SG +
Sbjct: 67 AFGCGHDNEGLF-GGAA--GLLGLGRGKLSLPSQTASS--YGGVFSYCLPDRSSSSSGYL 121
Query: 290 FFGDQGPATQQSTSFLPIGEKYDA---YFVGVESYCIGNSCLT--QSGFQA---LVDSGA 341
FG + SF P+ Y+VG+ +G L + F A ++DSG
Sbjct: 122 SFGA-AASVPAGASFTPMLSNPRVPTFYYVGLTGISVGGRRLPIPPASFGAGGVIIDSGT 180
Query: 342 SFTFLPTEIYAEVVVKFDKLVSSKRISLQGNS-WKYCYNASSEEMLKVPDMRLIFSKNQS 400
T LP YA + F +++ G S CY+ S + VP + L F
Sbjct: 181 VITRLPPSAYAALRDAFRAAMAAYP-RAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGAD 239
Query: 401 FVVRNHIFSFPENEGFTVFCLTVMSTDGDYG--IIG----QNFMMGHRIVFDRENLKLAW 454
+ +P ++ CL T D G IIG Q F R+V+D ++ +
Sbjct: 240 VELDASGVLYPVDDSSQ-VCLAFAGTSDDGGLSIIGNVQQQTF----RVVYDVAGGRIGF 294
Query: 455 SHSKC 459
+ C
Sbjct: 295 APGGC 299
|
Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 299 |
| >gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 88/357 (24%), Positives = 146/357 (40%), Gaps = 63/357 (17%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
Y I IGTP F V D GS+ LWVP + C A ++ +DPS SS+ K
Sbjct: 3 YGTISIGTPPQKFTVVFDTGSSDLWVPS--VYCTSSYAC------KSHGTFDPSKSSTYK 54
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
++ + S Y +S+SG+L D + + + +
Sbjct: 55 SLG------TTFS------------ISYGD-GSSASGFLGQDTVTVGGIT--------VT 87
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS-------VPSLLAKAGLI-QNSFSICFD 282
+ G K+ GS+ A DG++GLG + V L GLI +FS+ +
Sbjct: 88 NQQFGLATKEPGSFFATAVFDGILGLGFPSIEAVGTYTPVFDNLKSQGLIDSPAFSVYLN 147
Query: 283 ENDS--GSVFFGDQGPA-TQQSTSFLPIGEKYDAYFVGVESYCIGNSC-LTQSGFQALVD 338
+D+ G + FG P+ S +++P+ + + ++S +G S SG QA++D
Sbjct: 148 SDDAGGGEIIFGGVDPSKYTGSLTWVPV-TSQGYWQITLDSITVGGSATFCSSGCQAILD 206
Query: 339 SGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKN 398
+G S + PT I +++ K V + G Y + S L + F
Sbjct: 207 TGTSLLYGPTSIVSKIA----KAVGASLSEYGG----YVVDCDSISSLPD----VTFFIG 254
Query: 399 Q-SFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMGHRIVFDRENLKL 452
V + + G + CL+ S G I+G F+ +VFDR+N ++
Sbjct: 255 GAKITVPPSDYVLQPSSGGSSTCLSGFQSSPGGPLWILGDVFLRSAYVVFDRDNNRI 311
|
Aspartyl (acid) proteases include pepsins, cathepsins, and renins. Two-domain structure, probably arising from ancestral duplication. This family does not include the retroviral nor retrotransposon proteases (pfam00077), which are much smaller and appear to be homologous to a single domain of the eukaryotic asp proteases. Length = 316 |
| >gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 81/387 (20%), Positives = 125/387 (32%), Gaps = 91/387 (23%)
Query: 125 VALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK---- 180
+ LD LLW C D SS+ + V CS +C
Sbjct: 12 LVLDLAGPLLWSTC-----------------------DAGHSSTYQTVPCSSSVCSLANR 48
Query: 181 --------SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSV 232
+ C ++G L D+L + P V +
Sbjct: 49 YHCPGTCGGAPGPGCGNNTCTAHPYNPVTGECATGDLTQDVLSANTTDGSNPLLVVIFNF 108
Query: 233 IIGCGRKQTGSYLDGAAP--DGVMGLGLGDVSVPSLLAKAGLIQNSFSICF--DENDSGS 288
+ C L G P GV GLG +S+P+ LA A + F++C G
Sbjct: 109 VFSCAP---SLLLKGLPPGAQGVAGLGRSPLSLPAQLASAFGVARKFALCLPSSPGGPGV 165
Query: 289 VFFGDQGPATQ-------QSTSFLPI---GEKYDAYFVGVESYCIG------NSCLTQSG 332
FG +S S+ P+ K Y++GV S + N L+ +
Sbjct: 166 AIFGGGPYYLFPPPIDLSKSLSYTPLLTNPRKSGEYYIGVTSIAVNGHAVPLNPTLSAND 225
Query: 333 FQA----LVDSGASFTFLPTEIYAEVVVKFDKLVSS-KRISLQGNSWKYCYNASSEEMLK 387
+ + +T L ++IY F K + R+ + CY AS+ +
Sbjct: 226 RLGPGGVKLSTVVPYTVLRSDIYRAFTQAFAKATARIPRVPAAAVFPELCYPASALGNTR 285
Query: 388 ----VPDMRL----------IFSKNQSFVVRNHIFSFPENEGFTVFCLTVM---STDGDY 430
VP + L IF N V+ V CL + S
Sbjct: 286 LGYAVPAIDLVLDGGGVNWTIFGANSMVQVKG-----------GVACLAFVDGGSEPRPA 334
Query: 431 GIIGQNFMMGHRIVFDRENLKLAWSHS 457
+IG + M + +VFD E +L +S S
Sbjct: 335 VVIGGHQMEDNLLVFDLEKSRLGFSSS 361
|
Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors. This family also contains pepsin-like aspartic proteinases homologous to TAXI-I. Unlike TAXI-I, they have active site aspartates and are functionally active. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 362 |
| >gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 2e-09
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 58/238 (24%)
Query: 252 GVMGLGL-GDVSV----------PSLLAKAGLIQ-NSFSICFDENDS--GSVFFGD---- 293
GV+G+GL G+ + P L K GLI+ N++S+ ++ D+ GS+ FG
Sbjct: 74 GVLGIGLPGNEATYGTGYTYPNFPIALKKQGLIKKNAYSLYLNDLDASTGSILFGGVDTA 133
Query: 294 --QGP-ATQQSTSFLPI-----GEKYDAYFVGVESYCIGNSC----LTQSGFQALVDSGA 341
G T LPI G + V + S + S L AL+DSG
Sbjct: 134 KYSGDLVT------LPIVNDNGGSEPSELSVTLSSISVNGSSGNTTLLSKNLPALLDSGT 187
Query: 342 SFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFS-KNQS 400
+ T+LP++I + + S Y + ++ D L F+ +
Sbjct: 188 TLTYLPSDIVDAIAKQLGATYDSDEGL-------YVVDCDAK-----DDGSLTFNFGGAT 235
Query: 401 FVVRNHIFSFP--ENEGFTVFC-LTVMSTDGDYGIIGQNFMMGHR---IVFDRENLKL 452
V P ++G C L + + DY I+G F+ R +V+D +N ++
Sbjct: 236 ISVPLSDLVLPASTDDGGDGACYLGIQPSTSDYNILGDTFL---RSAYVVYDLDNNEI 290
|
SAPs (Secreted aspartic proteinases) are secreted from a group of pathogenic fungi, predominantly Candida species. They are secreted from the pathogen to degrade host proteins. SAP is one of the most significant extracellular hydrolytic enzymes produced by C. albicans. SAP proteins, encoded by a family of 10 SAP genes. All 10 SAP genes of C. albicans encode preproenzymes, approximately 60 amino acid longer than the mature enzyme, which are processed when transported via the secretory pathway. The mature enzymes contain sequence motifs typical for all aspartyl proteinases, including the two conserved aspartate residues other active site and conserved cysteine residues implicated in the maintenance of the three-dimensional structure. Most Sap proteins contain putative N-glycosylation sites, but it remains to be determined which Sap proteins are glycosylated. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). The overall structure of Sap protein conforms to the classical aspartic proteinase fold typified by pepsin. SAP is a bilobal enzyme, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. More recently evolved enzymes have similar three-dimensional structures, however their amino acid sequences are more divergent except for the conserved catalytic site motif. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 295 |
| >gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 5e-09
Identities = 88/367 (23%), Positives = 138/367 (37%), Gaps = 88/367 (23%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
++ I IGTP F V D GS+ LWVP S+ Y S
Sbjct: 11 YFGEIGIGTPPQKFTVIFDTGSSNLWVP---------SSKCYFS---------------- 45
Query: 170 KNVSCS-HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSV 228
++C H KS S K+ Y T S SG+ D + + V
Sbjct: 46 --IACYFHSKYKSSKSSTYKKNGTSASIQYGT--GSISGFFSQDSVTVGDL-------VV 94
Query: 229 QSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLIQNS-FSICF 281
++ V I ++ ++L A DG++GLG ++SV + + GL++ FS
Sbjct: 95 KNQVFIEATKEPGLTFL-LAKFDGILGLGFQEISVGKAVPVWYNMVEQGLVKEPVFSFWL 153
Query: 282 ----DENDSGSVFFGDQGPATQQST-SFLPIGEK-YDAYFVGVESYCIGNS----CLTQS 331
DE + G + FG P + +++P+ K Y + +G IG C
Sbjct: 154 NRNPDEEEGGELVFGGVDPKHFKGEHTYVPVTRKGYWQFEMG--DVLIGGKSTGFC--AG 209
Query: 332 GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDM 391
G A+ DSG S PT I ++ NS C + SS +P++
Sbjct: 210 GCAAIADSGTSLLAGPTTIVTQI-----------------NSAVDCNSLSS-----MPNV 247
Query: 392 RLIFSKNQSFVVRNHIFSFPENEGFTVFCLT------VMSTDGDYGIIGQNFMMGHRIVF 445
++F + + EG C++ V G I+G FM + VF
Sbjct: 248 SFTIG-GKTFELTPEQYILKVGEGAAAQCISGFTALDVPPPRGPLWILGDVFMGAYHTVF 306
Query: 446 DRENLKL 452
D NL++
Sbjct: 307 DYGNLRV 313
|
Phytepsin, a plant homolog of mammalian lysosomal pepsins, resides in grains, roots, stems, leaves and flowers. Phytepsin may participate in metabolic turnover and in protein processing events. In addition, it highly expressed in several plant tissues undergoing apoptosis. Phytepsin contains an internal region consisting of about 100 residues not present in animal or microbial pepsins. This region is thus called a plant specific insert. The insert is highly similar to saponins, which are lysosomal sphingolipid-activating proteins in mammalian cells. The saponin-like domain may have a role in the vacuolar targeting of phytepsin. Phytepsin, as its animal counterparts, possesses a topology typical of all aspartic proteases. They are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe has probably evolved from the other through a gene duplication event in the distant past. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 317 |
| >gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 83/362 (22%), Positives = 144/362 (39%), Gaps = 72/362 (19%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
+Y I IGTP +F V D GS+ LWVP + C+ L + + +Y+ S SS+
Sbjct: 7 YYGEIGIGTPPQTFTVVFDTGSSNLWVPS--VHCSLLDIACWLH-----HKYNSSKSSTY 59
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
+K+ + Y + S SGYL D + + V+
Sbjct: 60 ------------------VKNGTEFAIQYGS--GSLSGYLSQDTVSI-------GGLQVE 92
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV-------PSLLAKAGLIQNSFSICFD 282
+ G KQ G A DG++G+ +SV +++A+ + QN FS +
Sbjct: 93 GQ-LFGEAVKQPGITFIAAKFDGILGMAYPRISVDGVTPVFDNIMAQKLVEQNVFSFYLN 151
Query: 283 ENDS----GSVFFGDQGPATQQ-STSFLPIGEKYDAYF-VGVESYCIGNS-CLTQSGFQA 335
+ G + G P ++ + K AY+ + ++ +G+ L + G +A
Sbjct: 152 RDPDAQPGGELMLGGTDPKYYTGDLHYVNVTRK--AYWQIHMDQVDVGSGLTLCKGGCEA 209
Query: 336 LVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIF 395
+VD+G S P E V K + + + +QG C K+P + +I
Sbjct: 210 IVDTGTSLITGPVE----EVRALQKAIGAVPL-IQGEYMIDCE--------KIPTLPVIS 256
Query: 396 SK--NQSFVVRNHIFSFPENEGFTVFCLT-VMSTD-----GDYGIIGQNFMMGHRIVFDR 447
+ + + + ++ T CL+ M D G I+G F+ + VFDR
Sbjct: 257 FSLGGKVYPLTGEDYILKVSQRGTTICLSGFMGLDIPPPAGPLWILGDVFIGRYYTVFDR 316
Query: 448 EN 449
+N
Sbjct: 317 DN 318
|
Cathepsin D is the major aspartic proteinase of the lysosomal compartment where it functions in protein catabolism. It is a member of the pepsin family of proteinases. This enzyme is distinguished from other members of the pepsin family by two features that are characteristic of lysosomal hydrolases. First, mature Cathepsin D is found predominantly in a two-chain form due to a posttranslational cleavage event. Second, it contains phosphorylated, N-linked oligosaccharides that target the enzyme to lysosomes via mannose-6-phosphate receptors. Cathepsin D preferentially attacks peptide bonds flanked by bulky hydrophobic amino acids and its pH optimum is between pH 2.8 and 4.0. Two active site aspartic acid residues are essential for the catalytic activity of aspartic proteinases. Like other aspartic proteinases, Cathepsin D is a bilobed molecule; the two evolutionary related lobes are mostly made up of beta-sheets and flank a deep active site cleft. Each of the two related lobes contributes one active site aspartic acid residue and contains a single carbohydrate group. Cathepsin D is an essential enzyme. Mice deficient for proteinase cathepsin D, generated by gene targeting, develop normally during the first 2 weeks, stop thriving in the third week and die in a state of anorexia in the fourth week. The mice develop atrophy of ileal mucosa followed by other degradation of intestinal organs. In these knockout mice, lysosomal proteolysis was normal. These results suggest that vital functions of cathepsin D are exerted by limited proteolysis of proteins regulating cell growth and/or tissue homeostasis, while its contribution to bulk proteolysis in lysosomes appears to be non-critical. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 325 |
| >gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 80/356 (22%), Positives = 140/356 (39%), Gaps = 69/356 (19%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
++T I +GTP F V LD GS+ LWVP ++C ++ + S+YD S+SS+
Sbjct: 11 YFTDITLGTPPQKFKVILDTGSSNLWVP--SVKCGSIACFLH-------SKYDSSASSTY 61
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
K + + Y + S G++ D L + + +
Sbjct: 62 K------------------ANGTEFKIQYGS--GSLEGFVSQDTLSIGDLT--IKKQDFA 99
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLI---QNSFSIC 280
+ + G DG++GL +SV + + GL+ SF +
Sbjct: 100 EAT------SEPGLAFAFGKFDGILGLAYDTISVNKIVPPFYNMINQGLLDEPVFSFYLG 153
Query: 281 FDENDSGSVFFGDQGP-ATQQSTSFLPIGEKYDAYF-VGVESYCIGNSCLTQSGFQALVD 338
E D G FG ++LP+ K AY+ V +E +G+ L A +D
Sbjct: 154 SSEEDGGEATFGGIDESRFTGKITWLPVRRK--AYWEVELEKIGLGDEELELENTGAAID 211
Query: 339 SGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKN 398
+G S LP+++ AE++ + + +K+ SW Y ++ +PD+ F
Sbjct: 212 TGTSLIALPSDL-AEML---NAEIGAKK------SWNGQYTVDCSKVDSLPDLTFNFD-G 260
Query: 399 QSFVV--RNHIFSFPENEGFTVFCLTVMSTD---GDYGIIGQNFMMGHRIVFDREN 449
+F + ++ E G + T M G I+G F+ + V+D N
Sbjct: 261 YNFTLGPFDYTL---EVSGSCISAFTGMDFPEPVGPLAIVGDAFLRKYYSVYDLGN 313
|
Fungal Proteinase A, a proteolytic enzyme distributed among a variety of organisms, is a member of the aspartic proteinase superfamily. In Saccharomyces cerevisiae, targeted to the vacuole as a zymogen, activation of proteinases A at acidic pH can occur by two different pathways: a one-step process to release mature proteinase A, involving the intervention of proteinase B, or a step-wise pathway via the auto-activation product known as pseudo-proteinase A. Once active, S. cerevisiae proteinase A is essential to the activities of other yeast vacuolar hydrolases, including proteinase B and carboxypeptidase Y. The mature enzyme is bilobal, with each lobe providing one of the two catalytically essential aspartic acid residues in the active site. The crystal structure of free proteinase A shows that flap loop is atypically pointing directly into the S(1) pocket of the enzyme. Proteinase A preferentially hydrolyzes hydrophobic residues such as Phe, Leu or Glu at the P1 position and Phe, Ile, Leu or Ala at P1'. Moreover, the enzyme is inhibited by IA3, a natural and highly specific inhibitor produced by S. cerevisiae. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 320 |
| >gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 4e-07
Identities = 37/143 (25%), Positives = 47/143 (32%), Gaps = 36/143 (25%)
Query: 114 IDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173
I IGTP +F V LD GS+ LWVP S + S
Sbjct: 3 IGIGTPPQTFNVLLDTGSSNLWVPS-----------------------VDCQSLAIY--S 37
Query: 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVI 233
S S SS S C + Y S SG L D + +
Sbjct: 38 HSSYDDPSASSTYSDN-GCTFSITYG--TGSLSGGLSTDTVSIGDIEVV--------GQA 86
Query: 234 IGCGRKQTGSYLDGAAPDGVMGL 256
GC + G+ A DG++GL
Sbjct: 87 FGCATDEPGATFLPALFDGILGL 109
|
This family includes both cellular and retroviral pepsin-like aspartate proteases. The cellular pepsin and pepsin-like enzymes are twice as long as their retroviral counterparts. The cellular pepsin-like aspartic proteases are found in mammals, plants, fungi and bacteria. These well known and extensively characterized enzymes include pepsins, chymosin, rennin, cathepsins, and fungal aspartic proteases. Several have long been known to be medically (rennin, cathepsin D and E, pepsin) or commercially (chymosin) important. The eukaryotic pepsin-like proteases contain two domains possessing similar topological features. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except in the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The eukaryotic pepsin-like proteases have two active site ASP residues with each N- and C-terminal lobe contributing one residue. While the fungal and mammalian pepsins are bilobal proteins, retropepsins function as dimers and the monomer resembles structure of the N- or C-terminal domains of eukaryotic enzyme. The active site motif (Asp-Thr/Ser-Gly-Ser) is conserved between the retroviral and eukaryotic proteases and between the N-and C-terminal of eukaryotic pepsin-like proteases. The retropepsin-like family includes pepsin-like aspartate proteases from retroviruses, retrotransposons and retroelements; as well as eukaryotic DNA-damage-inducible proteins (DDIs), and bacterial aspartate peptidases. Retropepsin is synthesized as part of the POL polyprotein that contains an aspartyl-protease, a reverse transcriptase, RNase H, and an integrase. The POL polyprotein undergoes specific enzymatic cleavage to yield the mature proteins. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A) and A2 (retropepsin family). Length = 109 |
| >gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 90/358 (25%), Positives = 143/358 (39%), Gaps = 76/358 (21%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
+Y I IGTP F V D GS+ LWVP + C+ + S N + ++P SS+
Sbjct: 11 YYGTISIGTPPQDFTVIFDTGSSNLWVPS--VYCSSQACS-------NHNRFNPRQSSTY 61
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
++ + L I Y T S +G L D + + S
Sbjct: 62 QSTG------------QPL-----SIQ-YGT--GSMTGILGYDTVQVGGIS--------D 93
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGL------GDVSVPSLLAKAGLI-QNSFSICFD 282
++ I G + GS+ A DG++GL G V + GL+ Q+ FS+
Sbjct: 94 TNQIFGLSETEPGSFFYYAPFDGILGLAYPSIASSGATPVFDNMMSQGLVSQDLFSVYLS 153
Query: 283 END-SGS-VFFGDQGPA-TQQSTSFLPI-GEKYDAYFVGVESYCIGNSCLTQS-GFQALV 337
N GS V FG P+ S +++P+ E Y + + V+S I + S G QA+V
Sbjct: 154 SNGQQGSVVTFGGIDPSYYTGSLNWVPVTAETY--WQITVDSVTINGQVVACSGGCQAIV 211
Query: 338 DSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSK 397
D+G S P+ A + S + Q + + N SS + +PD+
Sbjct: 212 DTGTSLLVGPSSDIAN--------IQSDIGASQNQNGEMVVNCSS--ISSMPDV------ 255
Query: 398 NQSFVVRNHIFSFP------ENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 449
F + + P +++G M G+ I+G F+ + VFDR N
Sbjct: 256 --VFTINGVQYPLPPSAYILQDQGSCTSGFQSMG-LGELWILGDVFIRQYYSVFDRAN 310
|
Pepsin, a well-known aspartic protease, is produced by the human gastric mucosa in seven different zymogen isoforms, subdivided into two types: pepsinogen A and pepsinogen C. The prosequence of the zymogens are self cleaved under acidic pH. The mature enzymes are called pepsin A and pepsin C, correspondingly. The well researched porcine pepsin is also in this pepsin A family. Pepsins play an integral role in the digestion process of vertebrates. Pepsins are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. More recently evolved enzymes have similar three-dimensional structures, however their amino acid sequences are more divergent except for the conserved catalytic site motif. Pepsins specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 317 |
| >gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 60/265 (22%), Positives = 97/265 (36%), Gaps = 63/265 (23%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSSS 166
+Y I IGTP +FLV D GS+ LWVP CQ C N ++++PS S
Sbjct: 4 YYGEISIGTPPQNFLVLFDTGSSNLWVPSVLCQSQACT------------NHTKFNPSQS 51
Query: 167 SSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTED-TSSSGYLVDDILHLASFSKHAPQ 225
S+ YST T S Y + + + Q
Sbjct: 52 ST-----------------------------YSTNGETFSLQYGSGSLTGIFGYDTVTVQ 82
Query: 226 SSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV-------PSLLAKAGLIQNSFS 278
+ ++ G + G+ A DG++GL +S ++ + L FS
Sbjct: 83 GIIITNQEFGLSETEPGTNFVYAQFDGILGLAYPSISAGGATTVMQGMMQQNLLQAPIFS 142
Query: 279 ICFDENDSGS----VFFG--DQGPATQQSTSFLPIGEKYDAYFVGVESYCIGN--SCLTQ 330
+ G + FG D T Q E Y + +G++ + I +
Sbjct: 143 F-YLSGQQGQQGGELVFGGVDNNLYTGQIYWTPVTSETY--WQIGIQGFQINGQATGWCS 199
Query: 331 SGFQALVDSGASFTFLPTEIYAEVV 355
G QA+VD+G S P ++ + ++
Sbjct: 200 QGCQAIVDTGTSLLTAPQQVMSTLM 224
|
Gastricsin is also called pepsinogen C. Gastricsins are produced in gastric mucosa of mammals. It is synthesized by the chief cells in the stomach as an inactive zymogen. It is self-converted to a mature enzyme under acidic conditions. Human gastricsin is distributed throughout all parts of the stomach. Gastricsin is synthesized as an inactive progastricsin that has an approximately 40 residue prosequence. It is self-converting to a mature enzyme being triggered by a drop in pH from neutrality to acidic conditions. Like other aspartic proteases, gastricsin are characterized by two catalytic aspartic residues at the active site, and display optimal activity at acidic pH. Mature enzyme has a pseudo-2-fold symmetry that passes through the active site between the catalytic aspartate residues. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic aspartate residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 318 |
| >gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 69/355 (19%), Positives = 115/355 (32%), Gaps = 91/355 (25%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
T + IGTP + + LD GS+ LWV S+ + YDPS SS++K
Sbjct: 2 LTPVKIGTPPQTLNLDLDTGSSDLWV---------FSSETPAAQQGGHKLYDPSKSSTAK 52
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
+ + Y + +S+SG + D + + P +++
Sbjct: 53 LL-----------------PGATWSISYG-DGSSASGIVYTDTVSIGGVE--VPNQAIEL 92
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGLG---DVSVPSLL-----AKAGLIQNSFSICFD 282
+ + + D A+ DG++GL V P A + L F+
Sbjct: 93 ATAVS-----ASFFSDTAS-DGLLGLAFSSINTVQPPKQKTFFENALSSLDAPLFTADLR 146
Query: 283 ENDSGSVFFG--DQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSC-LTQSGFQALVDS 339
+ G FG D+ S+ P+ + SY +G ++SGF A+ D+
Sbjct: 147 KAAPGFYTFGYIDESKYKG-EISWTPVDNSSGFWQFTSTSYTVGGDAPWSRSGFSAIADT 205
Query: 340 GASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399
G + LP +V + V + W
Sbjct: 206 GTTLILLP----DAIVEAYYSQVPGAYYDSEYGGW------------------------- 236
Query: 400 SFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAW 454
FP + V S I+G F+ +VFD KL +
Sbjct: 237 ---------VFPCDTTLPDLSFAVFS------ILGDVFLKAQYVVFDVGGPKLGF 276
|
The members of this family are aspartic proteases of fungal origin, including aspergillopepsin, rhizopuspepsin, endothiapepsin, and rodosporapepsin. The various fungal species in this family may be the most economically important genus of fungi. They may serve as virulence factors or as industrial aids. For example, Aspergillopepsin from A. fumigatus is involved in invasive aspergillosis owing to its elastolytic activity and Aspergillopepsins from the mold A. saitoi are used in fermentation industry. Aspartic proteinases are a group of proteolytic enzymes in which the scissile peptide bond is attacked by a nucleophilic water molecule activated by two aspartic residues in a DT(S)G motif at the active site. They have a similar fold composed of two beta-barrel domains. Between the N-terminal and C-terminal domains, each of which contributes one catalytic aspartic residue, there is an extended active-site cleft capable of interacting with multiple residues of a substrate. Although members of the aspartic protease family of enzymes have very similar three-dimensional structures and catalytic mechanisms, each has unique substrate specificity. The members of this family has an optimal acidic pH (5.5) and cleaves protein substrates with similar specificity to that of porcine pepsin A, preferring hydrophobic residues at P1 and P1' in the cleave site. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 278 |
| >gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 65/282 (23%), Positives = 104/282 (36%), Gaps = 57/282 (20%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
+Y I IGTP SF V D GS+ LWVP S S
Sbjct: 12 YYGVITIGTPPQSFKVVFDTGSSNLWVP--------------------------SKKCSW 45
Query: 170 KNVSC-SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSV 228
N++C H S S K+ + Y + S SG+L D + + S Q+
Sbjct: 46 TNIACLLHNKYDSTKSSTYKKNGTEFAIQYGS--GSLSGFLSTDTVSVGGVSVKG-QTFA 102
Query: 229 QSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLI-QNSFSICF 281
++ + G A DG++G+G +SV + + L+ FS
Sbjct: 103 EAI-------NEPGLTFVAAKFDGILGMGYSSISVDGVVPVFYNMVNQKLVDAPVFSFYL 155
Query: 282 DENDS----GSVFFGDQGPATQQST-SFLPIGEKYDAYF-VGVESYCIGNSCLTQSGFQA 335
+ + S G + G P ++LP+ K Y+ ++S +G G QA
Sbjct: 156 NRDPSAKEGGELILGGSDPKHYTGNFTYLPVTRK--GYWQFKMDSVSVGEGEFCSGGCQA 213
Query: 336 LVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYC 377
+ D+G S P + + K + + +K I + G C
Sbjct: 214 IADTGTSLIAGPV----DEIEKLNNAIGAKPI-IGGEYMVNC 250
|
Cathepsin D is the major aspartic proteinase of the lysosomal compartment where it functions in protein catabolism. It is a member of the pepsin family of proteinases. This enzyme is distinguished from other members of the pepsin family by two features that are characteristic of lysosomal hydrolases. First, mature Cathepsin D is found predominantly in a two-chain form due to a posttranslational cleavage event. Second, it contains phosphorylated, N-linked oligosaccharides that target the enzyme to lysosomes via mannose-6-phosphate receptors. Cathepsin D preferentially attacks peptide bonds flanked by bulky hydrophobic amino acids and its pH optimum is between pH 2.8 and 4.0. Two active site aspartic acid residues are essential for the catalytic activity of aspartic proteinases. Like other aspartic proteinases, Cathepsin D is a bilobed molecule; the two evolutionary related lobes are mostly made up of beta-sheets and flank a deep active site cleft. Each of the two related lobes contributes one active site aspartic acid residue and contains a single carbohydrate group. Cathepsin D is an essential enzyme. Mice deficient for proteinase cathepsin D, generated by gene targeting, develop normally during the first 2 weeks, stop thriving in the third week and die in a state of anorexia in the fourth week. The mice develop atrophy of ileal mucosa followed by other degradation of intestinal organs. In these knockout mice, lysosomal proteolysis was normal. These results suggest that vital functions of cathepsin D are exerted by limited proteolysis of proteins regulating cell growth and/or tissue homeostasis, while its contribution to bulk proteolysis in lysosomes appears to be non-critical. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 329 |
| >gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPL-SASYYTSLDRNLSEYDPSSSSS 168
+Y I IGTP +F V D GS+ LWVP +C+PL +A +L YD S SS+
Sbjct: 9 YYGEIGIGTPPQTFKVVFDTGSSNLWVP--SSKCSPLYTACVTHNL------YDASDSST 60
Query: 169 SK 170
K
Sbjct: 61 YK 62
|
Renin, also known as angiotensinogenase, is a circulating enzyme that participates in the renin-angiotensin system that mediates extracellular volume, arterial vasoconstriction, and consequently mean arterial blood pressure. The enzyme is secreted by the kidneys from specialized juxtaglomerular cells in response to decreases in glomerular filtration rate (a consequence of low blood volume), diminished filtered sodium chloride and sympathetic nervous system innervation. The enzyme circulates in the blood stream and hydrolyzes angiotensinogen secreted from the liver into the peptide angiotensin I. Angiotensin I is further cleaved in the lungs by endothelial bound angiotensin converting enzyme (ACE) into angiotensin II, the final active peptide. Renin is a member of the aspartic protease family. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Aspartate residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 326 |
| >gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 55 KKNSVEYLELLLSNDWKRQKTRVKLQSNNNSSR-NQLLFPSEGSQTHFFGNQFYWLHYTW 113
KK + E + + ++ + N Q L SQ +FG
Sbjct: 76 KKKRKKNSEKGYISRVLTKHKYLETKDPNGLQYLQQDLLNFHNSQ--YFGE--------- 124
Query: 114 IDIGTPNVSFLVALDAGSNLLWVPC-QCIQ--CAPLSASYYTSLDRNLSEYDPSSSSS 168
I +GTP SF+V D GS+ LW+P +C CAP ++DP SS+
Sbjct: 125 IQVGTPPKSFVVVFDTGSSNLWIPSKECKSGGCAP------------HRKFDPKKSST 170
|
Length = 482 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| PLN03146 | 431 | aspartyl protease family protein; Provisional | 100.0 | |
| KOG1339 | 398 | consensus Aspartyl protease [Posttranslational mod | 100.0 | |
| cd05472 | 299 | cnd41_like Chloroplast Nucleoids DNA-binding Prote | 100.0 | |
| cd06096 | 326 | Plasmepsin_5 Plasmepsins are a class of aspartic p | 100.0 | |
| cd05489 | 362 | xylanase_inhibitor_I_like TAXI-I inhibits degradat | 100.0 | |
| cd05478 | 317 | pepsin_A Pepsin A, aspartic protease produced in g | 100.0 | |
| cd05490 | 325 | Cathepsin_D2 Cathepsin_D2, pepsin family of protei | 100.0 | |
| cd05485 | 329 | Cathepsin_D_like Cathepsin_D_like, pepsin family o | 100.0 | |
| PTZ00165 | 482 | aspartyl protease; Provisional | 100.0 | |
| cd05486 | 316 | Cathespin_E Cathepsin E, non-lysosomal aspartic pr | 100.0 | |
| cd05477 | 318 | gastricsin Gastricsins, asparate proteases produce | 100.0 | |
| cd06098 | 317 | phytepsin Phytepsin, a plant homolog of mammalian | 100.0 | |
| cd05488 | 320 | Proteinase_A_fungi Fungal Proteinase A , aspartic | 100.0 | |
| cd05487 | 326 | renin_like Renin stimulates production of angioten | 100.0 | |
| cd05475 | 273 | nucellin_like Nucellins, plant aspartic proteases | 100.0 | |
| cd05473 | 364 | beta_secretase_like Beta-secretase, aspartic-acid | 100.0 | |
| PTZ00147 | 453 | plasmepsin-1; Provisional | 100.0 | |
| PTZ00013 | 450 | plasmepsin 4 (PM4); Provisional | 100.0 | |
| cd05476 | 265 | pepsin_A_like_plant Chroloplast Nucleoids DNA-bind | 100.0 | |
| cd06097 | 278 | Aspergillopepsin_like Aspergillopepsin_like, aspar | 100.0 | |
| cd05474 | 295 | SAP_like SAPs, pepsin-like proteinases secreted fr | 100.0 | |
| PF00026 | 317 | Asp: Eukaryotic aspartyl protease The Prosite entr | 100.0 | |
| cd05471 | 283 | pepsin_like Pepsin-like aspartic proteases, biloba | 100.0 | |
| PF14543 | 164 | TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A | 99.98 | |
| PF14541 | 161 | TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D | 99.93 | |
| cd05470 | 109 | pepsin_retropepsin_like Cellular and retroviral pe | 99.86 | |
| cd05483 | 96 | retropepsin_like_bacteria Bacterial aspartate prot | 97.2 | |
| cd05479 | 124 | RP_DDI RP_DDI; retropepsin-like domain of DNA dama | 94.39 | |
| TIGR02281 | 121 | clan_AA_DTGA clan AA aspartic protease, TIGR02281 | 93.46 | |
| cd05479 | 124 | RP_DDI RP_DDI; retropepsin-like domain of DNA dama | 90.54 | |
| PF08284 | 135 | RVP_2: Retroviral aspartyl protease; InterPro: IPR | 89.86 | |
| PF13650 | 90 | Asp_protease_2: Aspartyl protease | 89.36 | |
| cd05484 | 91 | retropepsin_like_LTR_2 Retropepsins_like_LTR, peps | 88.48 | |
| TIGR03698 | 107 | clan_AA_DTGF clan AA aspartic protease, AF_0612 fa | 88.15 | |
| PF12384 | 177 | Peptidase_A2B: Ty3 transposon peptidase; InterPro: | 83.16 | |
| TIGR02281 | 121 | clan_AA_DTGA clan AA aspartic protease, TIGR02281 | 81.28 | |
| PF13650 | 90 | Asp_protease_2: Aspartyl protease | 81.23 |
| >PLN03146 aspartyl protease family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-66 Score=553.90 Aligned_cols=395 Identities=24% Similarity=0.429 Sum_probs=308.4
Q ss_pred HHhhccccccceEEEEeecChhhhhhhhccCCCCcccCCCCCCCcHHHHHHHhhchHHHHHHHhhhhcCCCCCCcccccc
Q 009271 14 ILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKLQSNNNSSRNQLLFP 93 (538)
Q Consensus 14 ~~~~~~~~~~~~~~l~hr~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 93 (538)
+....+...+++++|+||+++++|+. + +.....+..+++++++.+|.++..... ... .+
T Consensus 15 ~~~~~~~~~~~~~~l~h~~~~~sp~~---------~----~~~~~~~~~~~~~~~~~~r~~~~~~~~-----~~~---~~ 73 (431)
T PLN03146 15 LSAAEAPKGGFTVDLIHRDSPKSPFY---------N----PSETPSQRLRNAFRRSISRVNHFRPTD-----ASP---ND 73 (431)
T ss_pred hhhccccCCceEEEEEeCCCCCCCCC---------C----CCCChhHHHHHHHHHHHHHHHHHhhcc-----ccC---Cc
Confidence 33455577889999999999998552 1 222344566666776766654432210 000 01
Q ss_pred CCCCceeeecc-ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCcc
Q 009271 94 SEGSQTHFFGN-QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKN 171 (538)
Q Consensus 94 ~~g~~~~~~~~-~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~ 171 (538)
+..+. ..+..|+++|.||||||++.|++||||+++||+|. |..|.++. .+.|||++|+||+.
T Consensus 74 ------~~~~~~~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~----------~~~fdps~SST~~~ 137 (431)
T PLN03146 74 ------PQSDLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQV----------SPLFDPKKSSTYKD 137 (431)
T ss_pred ------cccCcccCCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCC----------CCcccCCCCCCCcc
Confidence 11111 22457999999999999999999999999999998 99998653 47999999999999
Q ss_pred ccCCCCCCCCCC---CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCC
Q 009271 172 VSCSHPLCKSRS---SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGA 248 (538)
Q Consensus 172 ~~C~~~~C~~~~---~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~ 248 (538)
++|+++.|.... .|... +.|.|.+.|+|| +.+.|++++|+|+|++..+.. ...+++.|||++.+.|.|..
T Consensus 138 ~~C~s~~C~~~~~~~~c~~~-~~c~y~i~Ygdg-s~~~G~l~~Dtltlg~~~~~~---~~v~~~~FGc~~~~~g~f~~-- 210 (431)
T PLN03146 138 VSCDSSQCQALGNQASCSDE-NTCTYSYSYGDG-SFTKGNLAVETLTIGSTSGRP---VSFPGIVFGCGHNNGGTFDE-- 210 (431)
T ss_pred cCCCCcccccCCCCCCCCCC-CCCeeEEEeCCC-CceeeEEEEEEEEeccCCCCc---ceeCCEEEeCCCCCCCCccC--
Confidence 999999998642 37553 469999999996 778999999999998753211 23679999999998887742
Q ss_pred CCceEEeeCCCCCChHHHHHhcCCCCCceEEeecC-----CCCccEEeCCCCCC---CceeeeeeecCCCCceEEEeEeE
Q 009271 249 APDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE-----NDSGSVFFGDQGPA---TQQSTSFLPIGEKYDAYFVGVES 320 (538)
Q Consensus 249 ~~dGIlGLG~~~~Sl~sqL~~~g~i~~~FS~cl~~-----~~~G~l~fG~~d~~---~~~~tplv~~~~~~~~y~V~l~~ 320 (538)
..+||||||++++|+++||... ++++|||||.+ ...|.|+||+.... ...+||++.... +.+|+|+|++
T Consensus 211 ~~~GilGLG~~~~Sl~sql~~~--~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~~~y~V~L~g 287 (431)
T PLN03146 211 KGSGIVGLGGGPLSLISQLGSS--IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-DTFYYLTLEA 287 (431)
T ss_pred CCceeEecCCCCccHHHHhhHh--hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCC-CCeEEEeEEE
Confidence 4699999999999999999853 66799999964 23699999985422 256899986533 4799999999
Q ss_pred EEECCeEeecCC--------ceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEE
Q 009271 321 YCIGNSCLTQSG--------FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392 (538)
Q Consensus 321 i~Vgg~~l~~~~--------~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it 392 (538)
|+||++++.... .++||||||++|+||+++|++|.++|.+++...+.......++.||+.... ..+|+|+
T Consensus 288 IsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~--~~~P~i~ 365 (431)
T PLN03146 288 ISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSD--IKLPIIT 365 (431)
T ss_pred EEECCEECcCCccccccCCCCcEEEeCCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCCC--CCCCeEE
Confidence 999999886422 369999999999999999999999999988754433333346789985432 4789999
Q ss_pred EEEcCCeeeeeecceeEEeecCCcceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 393 LIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 393 ~~f~gg~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
|+|+ |+++.+++.+|++...+ +.+|+++.... +.+|||+.|||++|||||++++||||++.+|.+
T Consensus 366 ~~F~-Ga~~~l~~~~~~~~~~~--~~~Cl~~~~~~-~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~ 430 (431)
T PLN03146 366 AHFT-GADVKLQPLNTFVKVSE--DLVCFAMIPTS-SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK 430 (431)
T ss_pred EEEC-CCeeecCcceeEEEcCC--CcEEEEEecCC-CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence 9995 68899999999987654 57899998764 469999999999999999999999999999975
|
|
| >KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-57 Score=475.61 Aligned_cols=334 Identities=33% Similarity=0.570 Sum_probs=278.1
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC-CCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI-QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKS 181 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~-~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 181 (538)
.+....||++|.||||||.|.|++||||+++||+|. |. .|..+. .+.|+|++||||+.+.|.+..|..
T Consensus 41 ~~~~~~Y~~~i~IGTPpq~f~v~~DTGS~~lWV~c~~c~~~C~~~~----------~~~f~p~~SSt~~~~~c~~~~c~~ 110 (398)
T KOG1339|consen 41 SYSSGEYYGNISIGTPPQSFTVVLDTGSDLLWVPCAPCSSACYSQH----------NPIFDPSASSTYKSVGCSSPRCKS 110 (398)
T ss_pred cccccccEEEEecCCCCeeeEEEEeCCCCceeeccccccccccccC----------CCccCccccccccccCCCCccccc
Confidence 445568999999999999999999999999999998 98 787643 245999999999999999999999
Q ss_pred CCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCC-CCCceEEeeCCCC
Q 009271 182 RSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDG-AAPDGVMGLGLGD 260 (538)
Q Consensus 182 ~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~-~~~dGIlGLG~~~ 260 (538)
...|..+++.|.|.+.|+|+ ++++|.+++|+|+|++.+. ...+++.|||+..+.|. ... .+.|||||||+++
T Consensus 111 ~~~~~~~~~~C~y~i~Ygd~-~~~~G~l~~Dtv~~~~~~~-----~~~~~~~FGc~~~~~g~-~~~~~~~dGIlGLg~~~ 183 (398)
T KOG1339|consen 111 LPQSCSPNSSCPYSIQYGDG-SSTSGYLATDTVTFGGTTS-----LPVPNQTFGCGTNNPGS-FGLFAAFDGILGLGRGS 183 (398)
T ss_pred cccCcccCCcCceEEEeCCC-CceeEEEEEEEEEEccccc-----cccccEEEEeeecCccc-cccccccceEeecCCCC
Confidence 86666667789999999996 6899999999999998531 23578999999999886 222 4789999999999
Q ss_pred CChHHHHHhcCCCCCceEEeecCC-----CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECCeE----
Q 009271 261 VSVPSLLAKAGLIQNSFSICFDEN-----DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGNSC---- 327 (538)
Q Consensus 261 ~Sl~sqL~~~g~i~~~FS~cl~~~-----~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg~~---- 327 (538)
+|+++|+.......++||+||.++ ..|.|+||+.|...+. ||||+.... .+|+|++++|.||++.
T Consensus 184 ~S~~~q~~~~~~~~~~FS~cL~~~~~~~~~~G~i~fG~~d~~~~~~~l~~tPl~~~~~--~~y~v~l~~I~vgg~~~~~~ 261 (398)
T KOG1339|consen 184 LSVPSQLPSFYNAINVFSYCLSSNGSPSSGGGSIIFGGVDSSHYTGSLTYTPLLSNPS--TYYQVNLDGISVGGKRPIGS 261 (398)
T ss_pred ccceeecccccCCceeEEEEeCCCCCCCCCCcEEEECCCcccCcCCceEEEeeccCCC--ccEEEEEeEEEECCccCCCc
Confidence 999999998777667999999875 3799999999998653 899976543 5999999999999843
Q ss_pred --eecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeec
Q 009271 328 --LTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRN 405 (538)
Q Consensus 328 --l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~ 405 (538)
......++||||||++|+||+++|++|.++|.+++.. ....+..+..||...... ..+|.|+|+|.+|+.|.+++
T Consensus 262 ~~~~~~~~~~iiDSGTs~t~lp~~~y~~i~~~~~~~~~~--~~~~~~~~~~C~~~~~~~-~~~P~i~~~f~~g~~~~l~~ 338 (398)
T KOG1339|consen 262 SLFCTDGGGAIIDSGTSLTYLPTSAYNALREAIGAEVSV--VGTDGEYFVPCFSISTSG-VKLPDITFHFGGGAVFSLPP 338 (398)
T ss_pred ceEecCCCCEEEECCcceeeccHHHHHHHHHHHHhheec--cccCCceeeecccCCCCc-ccCCcEEEEECCCcEEEeCc
Confidence 2223478999999999999999999999999987511 111223556899876433 45899999997789999999
Q ss_pred ceeEEeecCCcceEEEEEEecCC--CceeEcceeeeeeEEEEeCC-CCEEEEee--cCCC
Q 009271 406 HIFSFPENEGFTVFCLTVMSTDG--DYGIIGQNFMMGHRIVFDRE-NLKLAWSH--SKCE 460 (538)
Q Consensus 406 ~~y~~~~~~~~~~~Cl~i~~~~~--~~~IlG~~fl~~~yvVFD~e-~~rIGfa~--~~C~ 460 (538)
++|++...++... |+++..... ..||||+.||++++++||+. ++||||++ .+|.
T Consensus 339 ~~y~~~~~~~~~~-Cl~~~~~~~~~~~~ilG~~~~~~~~~~~D~~~~~riGfa~~~~~c~ 397 (398)
T KOG1339|consen 339 KNYLVEVSDGGGV-CLAFFNGMDSGPLWILGDVFQQNYLVVFDLGENSRVGFAPALTNCS 397 (398)
T ss_pred cceEEEECCCCCc-eeeEEecCCCCceEEEchHHhCCEEEEEeCCCCCEEEeccccccCC
Confidence 9999987653122 998777643 37999999999999999999 99999999 7774
|
|
| >cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-54 Score=437.33 Aligned_cols=287 Identities=27% Similarity=0.488 Sum_probs=240.2
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCC
Q 009271 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSL 188 (538)
Q Consensus 109 ~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 188 (538)
.||++|.||||||++.|++||||+++||+|. .|
T Consensus 1 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~--~c--------------------------------------------- 33 (299)
T cd05472 1 EYVVTVGLGTPARDQTVIVDTGSDLTWVQCQ--PC--------------------------------------------- 33 (299)
T ss_pred CeEEEEecCCCCcceEEEecCCCCcccccCC--CC---------------------------------------------
Confidence 3899999999999999999999999999873 11
Q ss_pred CCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCChHHHHH
Q 009271 189 KDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLA 268 (538)
Q Consensus 189 ~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~Sl~sqL~ 268 (538)
|.|.++|++| +.++|.+++|+|+|++. ...+++.|||++.+++.+. ..+||||||+..+|+++||.
T Consensus 34 ---~~~~i~Yg~G-s~~~G~~~~D~v~ig~~-------~~~~~~~Fg~~~~~~~~~~---~~~GilGLg~~~~s~~~ql~ 99 (299)
T cd05472 34 ---CLYQVSYGDG-SYTTGDLATDTLTLGSS-------DVVPGFAFGCGHDNEGLFG---GAAGLLGLGRGKLSLPSQTA 99 (299)
T ss_pred ---CeeeeEeCCC-ceEEEEEEEEEEEeCCC-------CccCCEEEECCccCCCccC---CCCEEEECCCCcchHHHHhh
Confidence 6899999986 67799999999999874 1357899999998887663 57999999999999999998
Q ss_pred hcCCCCCceEEeecC---CCCccEEeCCCCCC--CceeeeeeecCCCCceEEEeEeEEEECCeEeec-----CCceEEEc
Q 009271 269 KAGLIQNSFSICFDE---NDSGSVFFGDQGPA--TQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ-----SGFQALVD 338 (538)
Q Consensus 269 ~~g~i~~~FS~cl~~---~~~G~l~fG~~d~~--~~~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~-----~~~~aiiD 338 (538)
.+ .+++||+||.+ ...|+|+||++|+. ...|+|++.......+|.|+|++|+||++.+.. ....+|||
T Consensus 100 ~~--~~~~FS~~L~~~~~~~~G~l~fGg~d~~~g~l~~~pv~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~ivD 177 (299)
T cd05472 100 SS--YGGVFSYCLPDRSSSSSGYLSFGAAASVPAGASFTPMLSNPRVPTFYYVGLTGISVGGRRLPIPPASFGAGGVIID 177 (299)
T ss_pred Hh--hcCceEEEccCCCCCCCceEEeCCccccCCCceECCCccCCCCCCeEEEeeEEEEECCEECCCCccccCCCCeEEe
Confidence 65 56899999986 45799999999984 567999987654457999999999999998863 24579999
Q ss_pred CCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEEeecCCcce
Q 009271 339 SGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTV 418 (538)
Q Consensus 339 SGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~~~~~~ 418 (538)
|||++++||+++|++|.+++.+++...........++.||+.++.....+|+|+|+|+|+..+.+++++|++....+ +.
T Consensus 178 SGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~y~~~~~~~-~~ 256 (299)
T cd05472 178 SGTVITRLPPSAYAALRDAFRAAMAAYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGADVELDASGVLYPVDDS-SQ 256 (299)
T ss_pred CCCcceecCHHHHHHHHHHHHHHhccCCCCCCCCCCCccCcCCCCcCCccCCEEEEECCCCEEEeCcccEEEEecCC-CC
Confidence 99999999999999999999887643221112223456998877656689999999976899999999999843332 67
Q ss_pred EEEEEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecCC
Q 009271 419 FCLTVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459 (538)
Q Consensus 419 ~Cl~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C 459 (538)
+|+++...+ ...+|||+.|||++|+|||++++|||||+++|
T Consensus 257 ~C~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~~igfa~~~C 299 (299)
T cd05472 257 VCLAFAGTSDDGGLSIIGNVQQQTFRVVYDVAGGRIGFAPGGC 299 (299)
T ss_pred EEEEEeCCCCCCCCEEEchHHccceEEEEECCCCEEeEecCCC
Confidence 999988763 35799999999999999999999999999999
|
Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This fami |
| >cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=440.60 Aligned_cols=300 Identities=25% Similarity=0.432 Sum_probs=244.7
Q ss_pred cEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 009271 108 WLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCK 186 (538)
Q Consensus 108 ~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 186 (538)
.+||++|.||||+|++.|+|||||+++||+|. |..|..+. .+.|+|++|+|++.+.|++..|.....|.
T Consensus 2 ~~Y~~~i~vGtP~Q~~~v~~DTGS~~~wv~~~~C~~c~~~~----------~~~y~~~~Sst~~~~~C~~~~c~~~~~~~ 71 (326)
T cd06096 2 AYYFIDIFIGNPPQKQSLILDTGSSSLSFPCSQCKNCGIHM----------EPPYNLNNSITSSILYCDCNKCCYCLSCL 71 (326)
T ss_pred ceEEEEEEecCCCeEEEEEEeCCCCceEEecCCCCCcCCCC----------CCCcCcccccccccccCCCccccccCcCC
Confidence 37999999999999999999999999999998 99997543 46899999999999999999997666665
Q ss_pred CCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC----
Q 009271 187 SLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS---- 262 (538)
Q Consensus 187 ~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S---- 262 (538)
+ +.|.|.+.|++| +.+.|.+++|+|+|++..... ......++.|||+..+.+.|..+ ..|||||||+...+
T Consensus 72 ~--~~~~~~i~Y~~g-s~~~G~~~~D~v~lg~~~~~~-~~~~~~~~~fg~~~~~~~~~~~~-~~~GilGLg~~~~~~~~~ 146 (326)
T cd06096 72 N--NKCEYSISYSEG-SSISGFYFSDFVSFESYLNSN-SEKESFKKIFGCHTHETNLFLTQ-QATGILGLSLTKNNGLPT 146 (326)
T ss_pred C--CcCcEEEEECCC-CceeeEEEEEEEEeccCCCCc-cccccccEEeccCccccCccccc-ccceEEEccCCcccccCc
Confidence 4 569999999996 778999999999998753210 00123468999999988877544 57999999998742
Q ss_pred hHHHHHhcCCC---CCceEEeecCCCCccEEeCCCCCCCc--------------eeeeeeecCCCCceEEEeEeEEEECC
Q 009271 263 VPSLLAKAGLI---QNSFSICFDENDSGSVFFGDQGPATQ--------------QSTSFLPIGEKYDAYFVGVESYCIGN 325 (538)
Q Consensus 263 l~sqL~~~g~i---~~~FS~cl~~~~~G~l~fG~~d~~~~--------------~~tplv~~~~~~~~y~V~l~~i~Vgg 325 (538)
...+|.+++.+ +++||+||+++ .|.|+||++|+.++ .|+|+.. ..+|.|++++|.||+
T Consensus 147 ~~~~l~~~~~~~~~~~~FS~~l~~~-~G~l~~Gg~d~~~~~~~~~~~~~~~~~~~~~p~~~----~~~y~v~l~~i~vg~ 221 (326)
T cd06096 147 PIILLFTKRPKLKKDKIFSICLSED-GGELTIGGYDKDYTVRNSSIGNNKVSKIVWTPITR----KYYYYVKLEGLSVYG 221 (326)
T ss_pred hhHHHHHhcccccCCceEEEEEcCC-CeEEEECccChhhhcccccccccccCCceEEeccC----CceEEEEEEEEEEcc
Confidence 22235555544 28999999975 79999999987543 4777753 268999999999999
Q ss_pred eE---eecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeee
Q 009271 326 SC---LTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFV 402 (538)
Q Consensus 326 ~~---l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~ 402 (538)
+. .......+||||||++++||+++|++|.+++ |+|+|+|.+|.++.
T Consensus 222 ~~~~~~~~~~~~aivDSGTs~~~lp~~~~~~l~~~~------------------------------P~i~~~f~~g~~~~ 271 (326)
T cd06096 222 TTSNSGNTKGLGMLVDSGSTLSHFPEDLYNKINNFF------------------------------PTITIIFENNLKID 271 (326)
T ss_pred cccceecccCCCEEEeCCCCcccCCHHHHHHHHhhc------------------------------CcEEEEEcCCcEEE
Confidence 86 2235667999999999999999999998655 89999997689999
Q ss_pred eecceeEEeecCCcceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCC
Q 009271 403 VRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCE 460 (538)
Q Consensus 403 v~~~~y~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~ 460 (538)
+++++|++.... ...|+++... ++.+|||++|||++|+|||+|++|||||+++|.
T Consensus 272 i~p~~y~~~~~~--~~c~~~~~~~-~~~~ILG~~flr~~y~vFD~~~~riGfa~~~C~ 326 (326)
T cd06096 272 WKPSSYLYKKES--FWCKGGEKSV-SNKPILGASFFKNKQIIFDLDNNRIGFVESNCP 326 (326)
T ss_pred ECHHHhccccCC--ceEEEEEecC-CCceEEChHHhcCcEEEEECcCCEEeeEcCCCC
Confidence 999999987643 2345665544 368999999999999999999999999999993
|
The family contains a group of aspartic proteinases homologous to plasmepsin 5. Plasmepsins are a class of at least 10 enzymes produced by the plasmodium parasite. Through their haemoglobin-degrading activity, they are an important cause of symptoms in malaria sufferers. This family of enzymes is a potential target for anti-malarial drugs. Plasmepsins are aspartic acid proteases, which means their active site contains two aspartic acid residues. These two aspartic acid residue act respectively as proton donor and proton acceptor, catalyzing the hydrolysis of peptide bond in proteins. Aspartic proteinases are composed of two structurally similar beta barrel lobes, each lobe contributing an aspartic acid residue to form a catalytic dyad that acts to cleave the substrate peptide bond. The catalytic Asp residues are contained in an Asp-Thr-Gly-Ser/thr motif in both N- and C-terminal l |
| >cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-53 Score=440.95 Aligned_cols=313 Identities=23% Similarity=0.363 Sum_probs=249.6
Q ss_pred ecCCCeE-EEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC-----------
Q 009271 116 IGTPNVS-FLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS----------- 183 (538)
Q Consensus 116 iGtP~q~-~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~----------- 183 (538)
+|||-.+ |.|++||||+++||+|. |.+|+||+.++|+++.|....
T Consensus 2 ~~~~~~~~~~~~~DTGS~l~WvqC~-----------------------~~~sst~~~~~C~s~~C~~~~~~~~~~~~~~~ 58 (362)
T cd05489 2 TITPLKGAVPLVLDLAGPLLWSTCD-----------------------AGHSSTYQTVPCSSSVCSLANRYHCPGTCGGA 58 (362)
T ss_pred cccCccCCeeEEEECCCCceeeeCC-----------------------CCCcCCCCccCcCChhhccccccCCCccccCC
Confidence 5788777 99999999999999983 346889999999999998531
Q ss_pred ---CCCCCCCCCceeEe-cCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCC
Q 009271 184 ---SCKSLKDPCPYIAD-YSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (538)
Q Consensus 184 ---~C~~~~~~c~y~~~-Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~ 259 (538)
.|.+ +.|.|... |++| +.+.|+|++|+|+|+..++.......++++.|||++++...... ...|||||||++
T Consensus 59 ~~~~c~~--~~C~y~~~~y~~g-s~t~G~l~~Dtl~~~~~~g~~~~~~~~~~~~FGC~~~~~~~~~~-~~~dGIlGLg~~ 134 (362)
T cd05489 59 PGPGCGN--NTCTAHPYNPVTG-ECATGDLTQDVLSANTTDGSNPLLVVIFNFVFSCAPSLLLKGLP-PGAQGVAGLGRS 134 (362)
T ss_pred CCCCCCC--CcCeeEccccccC-cEeeEEEEEEEEEecccCCCCcccceeCCEEEEcCCcccccCCc-cccccccccCCC
Confidence 3433 35988665 7775 78999999999999864322100024689999999886432111 147999999999
Q ss_pred CCChHHHHHhcCCCCCceEEeecCC--CCccEEeCCCCC----------CCceeeeeeecCCCCceEEEeEeEEEECCeE
Q 009271 260 DVSVPSLLAKAGLIQNSFSICFDEN--DSGSVFFGDQGP----------ATQQSTSFLPIGEKYDAYFVGVESYCIGNSC 327 (538)
Q Consensus 260 ~~Sl~sqL~~~g~i~~~FS~cl~~~--~~G~l~fG~~d~----------~~~~~tplv~~~~~~~~y~V~l~~i~Vgg~~ 327 (538)
++|+++||..++.+.++|||||.++ ..|.|+||+.+. ..+.||||+..+..+.+|+|+|++|+||+++
T Consensus 135 ~lSl~sql~~~~~~~~~FS~CL~~~~~~~g~l~fG~~~~~~~~~~~~~~~~~~~tPl~~~~~~~~~Y~v~l~~IsVg~~~ 214 (362)
T cd05489 135 PLSLPAQLASAFGVARKFALCLPSSPGGPGVAIFGGGPYYLFPPPIDLSKSLSYTPLLTNPRKSGEYYIGVTSIAVNGHA 214 (362)
T ss_pred ccchHHHhhhhcCCCcceEEEeCCCCCCCeeEEECCCchhcccccccccCCccccccccCCCCCCceEEEEEEEEECCEE
Confidence 9999999998766679999999864 579999999885 3457999987654457999999999999998
Q ss_pred eecC----------CceEEEcCCCccccccHHHHHHHHHHHHHhhccccccccc-ccccccccccc----cccccCccEE
Q 009271 328 LTQS----------GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQG-NSWKYCYNASS----EEMLKVPDMR 392 (538)
Q Consensus 328 l~~~----------~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~-~~~~~Cy~~~~----~~~~~~P~it 392 (538)
+... ..++||||||++|+||+++|++|.++|.+++...+..... ..++.||+... .....+|+|+
T Consensus 215 l~~~~~~~~~~~~~~~g~iiDSGTs~t~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~it 294 (362)
T cd05489 215 VPLNPTLSANDRLGPGGVKLSTVVPYTVLRSDIYRAFTQAFAKATARIPRVPAAAVFPELCYPASALGNTRLGYAVPAID 294 (362)
T ss_pred CCCCchhccccccCCCcEEEecCCceEEECHHHHHHHHHHHHHHhcccCcCCCCCCCcCccccCCCcCCcccccccceEE
Confidence 8631 3479999999999999999999999999888654332221 22368998643 2245799999
Q ss_pred EEEcC-CeeeeeecceeEEeecCCcceEEEEEEecC---CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 393 LIFSK-NQSFVVRNHIFSFPENEGFTVFCLTVMSTD---GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 393 ~~f~g-g~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~---~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
|+|+| |++|.|++++|+++..+ +.+||+|+..+ +..||||+.||++||+|||++++||||+++
T Consensus 295 ~~f~g~g~~~~l~~~ny~~~~~~--~~~Cl~f~~~~~~~~~~~IlG~~~~~~~~vvyD~~~~riGfa~~ 361 (362)
T cd05489 295 LVLDGGGVNWTIFGANSMVQVKG--GVACLAFVDGGSEPRPAVVIGGHQMEDNLLVFDLEKSRLGFSSS 361 (362)
T ss_pred EEEeCCCeEEEEcCCceEEEcCC--CcEEEEEeeCCCCCCceEEEeeheecceEEEEECCCCEeecccC
Confidence 99987 89999999999998654 57999998865 347999999999999999999999999975
|
Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability |
| >cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-53 Score=432.42 Aligned_cols=299 Identities=24% Similarity=0.380 Sum_probs=247.4
Q ss_pred eeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCC
Q 009271 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (538)
Q Consensus 101 ~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C 179 (538)
++.|+.+..||++|.||||+|++.|+|||||+++||+|. |..|.- ...+.|+|++|+|++..
T Consensus 2 ~l~n~~~~~Y~~~i~vGtp~q~~~v~~DTGS~~~wv~~~~C~~~~c----------~~~~~f~~~~Sst~~~~------- 64 (317)
T cd05478 2 PLTNYLDMEYYGTISIGTPPQDFTVIFDTGSSNLWVPSVYCSSQAC----------SNHNRFNPRQSSTYQST------- 64 (317)
T ss_pred ccccccCCEEEEEEEeCCCCcEEEEEEeCCCccEEEecCCCCcccc----------cccCcCCCCCCcceeeC-------
Confidence 356888999999999999999999999999999999997 864321 13469999999999964
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCC
Q 009271 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (538)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~ 259 (538)
.|.|.+.|++| + +.|.+++|+|+|++. ..+++.|||++...+.+......|||||||+.
T Consensus 65 -----------~~~~~~~yg~g-s-~~G~~~~D~v~ig~~--------~i~~~~fg~~~~~~~~~~~~~~~dGilGLg~~ 123 (317)
T cd05478 65 -----------GQPLSIQYGTG-S-MTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFFYYAPFDGILGLAYP 123 (317)
T ss_pred -----------CcEEEEEECCc-e-EEEEEeeeEEEECCE--------EECCEEEEEEEecCccccccccccceeeeccc
Confidence 37899999986 4 799999999999874 35789999998887766544457999999987
Q ss_pred CC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCe
Q 009271 260 DV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNS 326 (538)
Q Consensus 260 ~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~ 326 (538)
.+ +++++|+++|+|+ ++||+||.++ ..|.|+||++|+.++ .|+|+.. ..+|.|.+++|.||++
T Consensus 124 ~~s~~~~~~~~~~L~~~g~i~~~~FS~~L~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~----~~~w~v~l~~v~v~g~ 199 (317)
T cd05478 124 SIASSGATPVFDNMMSQGLVSQDLFSVYLSSNGQQGSVVTFGGIDPSYYTGSLNWVPVTA----ETYWQITVDSVTINGQ 199 (317)
T ss_pred hhcccCCCCHHHHHHhCCCCCCCEEEEEeCCCCCCCeEEEEcccCHHHccCceEEEECCC----CcEEEEEeeEEEECCE
Confidence 54 4889999999997 9999999876 368999999998754 4777742 3799999999999999
Q ss_pred Eeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeec
Q 009271 327 CLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRN 405 (538)
Q Consensus 327 ~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~ 405 (538)
.+.. ....+||||||++++||+++|++|.+++..... . ..+|..+|.....+|.|+|+| +|..|.|++
T Consensus 200 ~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~~~~~~~-----~-----~~~~~~~C~~~~~~P~~~f~f-~g~~~~i~~ 268 (317)
T cd05478 200 VVACSGGCQAIVDTGTSLLVGPSSDIANIQSDIGASQN-----Q-----NGEMVVNCSSISSMPDVVFTI-NGVQYPLPP 268 (317)
T ss_pred EEccCCCCEEEECCCchhhhCCHHHHHHHHHHhCCccc-----c-----CCcEEeCCcCcccCCcEEEEE-CCEEEEECH
Confidence 9863 345799999999999999999999987754221 0 124555665555789999999 679999999
Q ss_pred ceeEEeecCCcceEEE-EEEecC-CCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 406 HIFSFPENEGFTVFCL-TVMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 406 ~~y~~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
++|+... ..+|+ +|+..+ .+.||||++|||++|+|||++++|||||+
T Consensus 269 ~~y~~~~----~~~C~~~~~~~~~~~~~IlG~~fl~~~y~vfD~~~~~iG~A~ 317 (317)
T cd05478 269 SAYILQD----QGSCTSGFQSMGLGELWILGDVFIRQYYSVFDRANNKVGLAP 317 (317)
T ss_pred HHheecC----CCEEeEEEEeCCCCCeEEechHHhcceEEEEeCCCCEEeecC
Confidence 9999865 46895 677654 35799999999999999999999999996
|
Pepsin, a well-known aspartic protease, is produced by the human gastric mucosa in seven different zymogen isoforms, subdivided into two types: pepsinogen A and pepsinogen C. The prosequence of the zymogens are self cleaved under acidic pH. The mature enzymes are called pepsin A and pepsin C, correspondingly. The well researched porcine pepsin is also in this pepsin A family. Pepsins play an integral role in the digestion process of vertebrates. Pepsins are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. More recently evolved enzymes have similar three-dimensional structures, however their amino acid sequences are more divergent except for the conserved catalytic site motif. Pepsins specifically cleave bonds in peptides which |
| >cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=433.14 Aligned_cols=302 Identities=23% Similarity=0.373 Sum_probs=241.0
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
|+.+..||++|.||||||+|.|++||||+++||+|. |..|.. .|..++.|+|++|+|++..
T Consensus 1 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~--------~C~~~~~y~~~~SsT~~~~---------- 62 (325)
T cd05490 1 NYMDAQYYGEIGIGTPPQTFTVVFDTGSSNLWVPSVHCSLLDI--------ACWLHHKYNSSKSSTYVKN---------- 62 (325)
T ss_pred CCcCCEEEEEEEECCCCcEEEEEEeCCCccEEEEcCCCCCCCc--------cccCcCcCCcccCcceeeC----------
Confidence 467889999999999999999999999999999997 863311 0113468999999999852
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S 262 (538)
.|.|.+.|++| ++.|.+++|+|+|++. ...++.|||++.+.+........|||||||++.++
T Consensus 63 --------~~~~~i~Yg~G--~~~G~~~~D~v~~g~~--------~~~~~~Fg~~~~~~~~~~~~~~~dGilGLg~~~~s 124 (325)
T cd05490 63 --------GTEFAIQYGSG--SLSGYLSQDTVSIGGL--------QVEGQLFGEAVKQPGITFIAAKFDGILGMAYPRIS 124 (325)
T ss_pred --------CcEEEEEECCc--EEEEEEeeeEEEECCE--------EEcCEEEEEEeeccCCcccceeeeEEEecCCcccc
Confidence 38999999996 4799999999999875 35789999999887743333357999999987654
Q ss_pred ------hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeE
Q 009271 263 ------VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSC 327 (538)
Q Consensus 263 ------l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~ 327 (538)
++++|+++|+|. ++||+||.++ ..|.|+||++|+.++ .++|+.. ..+|.|++++|.||++.
T Consensus 125 ~~~~~~~~~~l~~~g~i~~~~FS~~L~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~~~~~----~~~w~v~l~~i~vg~~~ 200 (325)
T cd05490 125 VDGVTPVFDNIMAQKLVEQNVFSFYLNRDPDAQPGGELMLGGTDPKYYTGDLHYVNVTR----KAYWQIHMDQVDVGSGL 200 (325)
T ss_pred ccCCCCHHHHHHhcCCCCCCEEEEEEeCCCCCCCCCEEEECccCHHHcCCceEEEEcCc----ceEEEEEeeEEEECCee
Confidence 567999999996 9999999853 369999999998765 3666632 37999999999999875
Q ss_pred ee-cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecc
Q 009271 328 LT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNH 406 (538)
Q Consensus 328 l~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~ 406 (538)
.. .....+||||||+++++|+++|++|.+++.+. .. . ..+|..+|.....+|+|+|+| ||+.|.|+++
T Consensus 201 ~~~~~~~~aiiDSGTt~~~~p~~~~~~l~~~~~~~----~~-~-----~~~~~~~C~~~~~~P~i~f~f-gg~~~~l~~~ 269 (325)
T cd05490 201 TLCKGGCEAIVDTGTSLITGPVEEVRALQKAIGAV----PL-I-----QGEYMIDCEKIPTLPVISFSL-GGKVYPLTGE 269 (325)
T ss_pred eecCCCCEEEECCCCccccCCHHHHHHHHHHhCCc----cc-c-----CCCEEecccccccCCCEEEEE-CCEEEEEChH
Confidence 43 34568999999999999999999999877532 10 1 123455565556789999999 7799999999
Q ss_pred eeEEeecCCcceEEE-EEEec-----CCCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 407 IFSFPENEGFTVFCL-TVMST-----DGDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 407 ~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
+|++.........|+ +|+.. ....||||+.|||+||+|||++++|||||+
T Consensus 270 ~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilGd~flr~~y~vfD~~~~~IGfA~ 325 (325)
T cd05490 270 DYILKVSQRGTTICLSGFMGLDIPPPAGPLWILGDVFIGRYYTVFDRDNDRVGFAK 325 (325)
T ss_pred HeEEeccCCCCCEEeeEEEECCCCCCCCceEEEChHhheeeEEEEEcCCcEeeccC
Confidence 999876433346895 67653 234799999999999999999999999996
|
Cathepsin D is the major aspartic proteinase of the lysosomal compartment where it functions in protein catabolism. It is a member of the pepsin family of proteinases. This enzyme is distinguished from other members of the pepsin family by two features that are characteristic of lysosomal hydrolases. First, mature Cathepsin D is found predominantly in a two-chain form due to a posttranslational cleavage event. Second, it contains phosphorylated, N-linked oligosaccharides that target the enzyme to lysosomes via mannose-6-phosphate receptors. Cathepsin D preferentially attacks peptide bonds flanked by bulky hydrophobic amino acids and its pH optimum is between pH 2.8 and 4.0. Two active site aspartic acid residues are essential for the catalytic activity of aspartic proteinases. Like other aspartic proteinases, Cathepsin D is a bilobed molecule; the two evolutionary related lobes are mostly made up of beta-sheets and flank |
| >cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-52 Score=427.87 Aligned_cols=305 Identities=22% Similarity=0.356 Sum_probs=248.3
Q ss_pred eeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCC
Q 009271 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (538)
Q Consensus 101 ~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C 179 (538)
++.|+.+.+||++|.||||+|++.|++||||+++||+|. |..|... |...+.|+|++|+|++..
T Consensus 3 ~~~n~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~--------c~~~~~y~~~~Sst~~~~------- 67 (329)
T cd05485 3 PLSNYMDAQYYGVITIGTPPQSFKVVFDTGSSNLWVPSKKCSWTNIA--------CLLHNKYDSTKSSTYKKN------- 67 (329)
T ss_pred cceeccCCeEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCCCcc--------ccCCCeECCcCCCCeEEC-------
Confidence 356888999999999999999999999999999999998 8643210 112468999999999864
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCC
Q 009271 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (538)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~ 259 (538)
.|.|.+.|++| + +.|.+++|+++|++. ...++.|||+..+.|........+||||||++
T Consensus 68 -----------~~~~~i~Y~~g-~-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (329)
T cd05485 68 -----------GTEFAIQYGSG-S-LSGFLSTDTVSVGGV--------SVKGQTFAEAINEPGLTFVAAKFDGILGMGYS 126 (329)
T ss_pred -----------CeEEEEEECCc-e-EEEEEecCcEEECCE--------EECCEEEEEEEecCCccccccccceEEEcCCc
Confidence 48999999986 4 799999999999874 25689999998877643333467999999998
Q ss_pred CCC------hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEEC
Q 009271 260 DVS------VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIG 324 (538)
Q Consensus 260 ~~S------l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vg 324 (538)
.+| ++.||+++|+|+ ++||+||.++ ..|+|+||+.|+.++ .++|+.. ..+|.|.+++|.||
T Consensus 127 ~~s~~~~~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~~~~i~v~ 202 (329)
T cd05485 127 SISVDGVVPVFYNMVNQKLVDAPVFSFYLNRDPSAKEGGELILGGSDPKHYTGNFTYLPVTR----KGYWQFKMDSVSVG 202 (329)
T ss_pred cccccCCCCHHHHHHhCCCCCCCEEEEEecCCCCCCCCcEEEEcccCHHHcccceEEEEcCC----ceEEEEEeeEEEEC
Confidence 765 467999999996 8999999863 369999999998765 4888742 37999999999999
Q ss_pred CeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 325 g~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
++.+......+||||||++++||+++|++|.+++... ... ..||..+|....++|+|+|+| |++++.|+
T Consensus 203 ~~~~~~~~~~~iiDSGtt~~~lP~~~~~~l~~~~~~~----~~~------~~~~~~~C~~~~~~p~i~f~f-gg~~~~i~ 271 (329)
T cd05485 203 EGEFCSGGCQAIADTGTSLIAGPVDEIEKLNNAIGAK----PII------GGEYMVNCSAIPSLPDITFVL-GGKSFSLT 271 (329)
T ss_pred CeeecCCCcEEEEccCCcceeCCHHHHHHHHHHhCCc----ccc------CCcEEEeccccccCCcEEEEE-CCEEeEEC
Confidence 9988756678999999999999999999998776431 111 135666776556789999999 77999999
Q ss_pred cceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 405 NHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
+++|+++..+....+|+ +++..+ ++.||||+.|||++|+|||++++|||||+
T Consensus 272 ~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IlG~~fl~~~y~vFD~~~~~ig~a~ 329 (329)
T cd05485 272 GKDYVLKVTQMGQTICLSGFMGIDIPPPAGPLWILGDVFIGKYYTEFDLGNNRVGFAT 329 (329)
T ss_pred hHHeEEEecCCCCCEEeeeEEECcCCCCCCCeEEEchHHhccceEEEeCCCCEEeecC
Confidence 99999876543357895 677532 34799999999999999999999999985
|
Cathepsin D is the major aspartic proteinase of the lysosomal compartment where it functions in protein catabolism. It is a member of the pepsin family of proteinases. This enzyme is distinguished from other members of the pepsin family by two features that are characteristic of lysosomal hydrolases. First, mature Cathepsin D is found predominantly in a two-chain form due to a posttranslational cleavage event. Second, it contains phosphorylated, N-linked oligosaccharides that target the enzyme to lysosomes via mannose-6-phosphate receptors. Cathepsin D preferentially attacks peptide bonds flanked by bulky hydrophobic amino acids and its pH optimum is between pH 2.8 and 4.0. Two active site aspartic acid residues are essential for the catalytic activity of aspartic proteinases. Like other aspartic proteinases, Cathepsin D is a bilobed molecule; the two evolutionary related lobes are mostly made up of beta-sheets an |
| >PTZ00165 aspartyl protease; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-51 Score=441.08 Aligned_cols=308 Identities=22% Similarity=0.380 Sum_probs=248.7
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQ--CAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 174 (538)
...++.|+.+..||++|.||||||+|.|++||||+++||||. |.. |. .++.|||++||||+.+.+
T Consensus 109 ~~~~l~n~~d~~Y~~~I~IGTPpQ~f~Vv~DTGSS~lWVps~~C~~~~C~------------~~~~yd~s~SSTy~~~~~ 176 (482)
T PTZ00165 109 LQQDLLNFHNSQYFGEIQVGTPPKSFVVVFDTGSSNLWIPSKECKSGGCA------------PHRKFDPKKSSTYTKLKL 176 (482)
T ss_pred cceecccccCCeEEEEEEeCCCCceEEEEEeCCCCCEEEEchhcCccccc------------ccCCCCccccCCcEecCC
Confidence 346677999999999999999999999999999999999998 854 43 346899999999997532
Q ss_pred CCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEE
Q 009271 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVM 254 (538)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIl 254 (538)
.. ....+.++|++| +..|.+++|+|+|++. .++++.|||++.+++..+...+.||||
T Consensus 177 ~~-------------~~~~~~i~YGsG--s~~G~l~~DtV~ig~l--------~i~~q~FG~a~~~s~~~f~~~~~DGIL 233 (482)
T PTZ00165 177 GD-------------ESAETYIQYGTG--ECVLALGKDTVKIGGL--------KVKHQSIGLAIEESLHPFADLPFDGLV 233 (482)
T ss_pred CC-------------ccceEEEEeCCC--cEEEEEEEEEEEECCE--------EEccEEEEEEEecccccccccccccee
Confidence 21 112567999997 4679999999999874 367899999998876533444689999
Q ss_pred eeCCCCC---------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc------eeeeeeecCCCCceEEE
Q 009271 255 GLGLGDV---------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ------QSTSFLPIGEKYDAYFV 316 (538)
Q Consensus 255 GLG~~~~---------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~------~~tplv~~~~~~~~y~V 316 (538)
|||++.+ +++.+|.+||+|+ ++||+||.++ ..|.|+|||+|+..+ .|+|++. ..+|.|
T Consensus 234 GLg~~~~s~~s~~~~~p~~~~l~~qgli~~~~FS~yL~~~~~~~G~l~fGGiD~~~~~~~g~i~~~Pv~~----~~yW~i 309 (482)
T PTZ00165 234 GLGFPDKDFKESKKALPIVDNIKKQNLLKRNIFSFYMSKDLNQPGSISFGSADPKYTLEGHKIWWFPVIS----TDYWEI 309 (482)
T ss_pred ecCCCcccccccCCCCCHHHHHHHcCCcccceEEEEeccCCCCCCEEEeCCcCHHHcCCCCceEEEEccc----cceEEE
Confidence 9998764 5678999999997 9999999753 569999999987533 4777743 379999
Q ss_pred eEeEEEECCeEeec--CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEE
Q 009271 317 GVESYCIGNSCLTQ--SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLI 394 (538)
Q Consensus 317 ~l~~i~Vgg~~l~~--~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~ 394 (538)
.+++|.||++.+.. ....+|+||||+++++|+++|++|.+++... ..|+.. ..+|+|+|+
T Consensus 310 ~l~~i~vgg~~~~~~~~~~~aIiDTGTSli~lP~~~~~~i~~~i~~~-------------~~C~~~-----~~lP~itf~ 371 (482)
T PTZ00165 310 EVVDILIDGKSLGFCDRKCKAAIDTGSSLITGPSSVINPLLEKIPLE-------------EDCSNK-----DSLPRISFV 371 (482)
T ss_pred EeCeEEECCEEeeecCCceEEEEcCCCccEeCCHHHHHHHHHHcCCc-------------cccccc-----ccCCceEEE
Confidence 99999999987753 5678999999999999999999998766421 236643 478999999
Q ss_pred EcC--C--eeeeeecceeEEeec--CCcceEE-EEEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 395 FSK--N--QSFVVRNHIFSFPEN--EGFTVFC-LTVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 395 f~g--g--~~~~v~~~~y~~~~~--~~~~~~C-l~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
|.| | .+|.+++++|+++.. +.....| ++++..+ ++.||||++||++||+|||++|+|||||+++|...
T Consensus 372 f~g~~g~~v~~~l~p~dYi~~~~~~~~~~~~C~~g~~~~d~~~~~g~~~ILGd~Flr~yy~VFD~~n~rIGfA~a~~~~~ 451 (482)
T PTZ00165 372 LEDVNGRKIKFDMDPEDYVIEEGDSEEQEHQCVIGIIPMDVPAPRGPLFVLGNNFIRKYYSIFDRDHMMVGLVPAKHDQS 451 (482)
T ss_pred ECCCCCceEEEEEchHHeeeecccCCCCCCeEEEEEEECCCCCCCCceEEEchhhheeEEEEEeCCCCEEEEEeeccCCC
Confidence 953 2 278999999999742 2225799 6888643 24799999999999999999999999999998653
|
|
| >cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-52 Score=425.19 Aligned_cols=291 Identities=21% Similarity=0.373 Sum_probs=237.9
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 009271 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCK 186 (538)
Q Consensus 110 yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 186 (538)
||++|.||||||+|.|+|||||+++||+|. |. .|.. ++.|+|++|+|++..
T Consensus 1 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~s~~C~~~~C~~------------~~~y~~~~SsT~~~~-------------- 54 (316)
T cd05486 1 YFGQISIGTPPQNFTVIFDTGSSNLWVPSIYCTSQACTK------------HNRFQPSESSTYVSN-------------- 54 (316)
T ss_pred CeEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCc------------cceECCCCCcccccC--------------
Confidence 799999999999999999999999999998 75 4543 368999999999854
Q ss_pred CCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC----
Q 009271 187 SLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS---- 262 (538)
Q Consensus 187 ~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S---- 262 (538)
.|.|++.|++| ++.|.+++|+|+|++. ...++.|||+..+.+..+.....|||||||++.++
T Consensus 55 ----~~~~~i~Yg~g--~~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~ 120 (316)
T cd05486 55 ----GEAFSIQYGTG--SLTGIIGIDQVTVEGI--------TVQNQQFAESVSEPGSTFQDSEFDGILGLAYPSLAVDGV 120 (316)
T ss_pred ----CcEEEEEeCCc--EEEEEeeecEEEECCE--------EEcCEEEEEeeccCcccccccccceEeccCchhhccCCC
Confidence 48999999996 4799999999999864 35789999998877653333467999999987654
Q ss_pred --hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEeec-
Q 009271 263 --VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ- 330 (538)
Q Consensus 263 --l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~- 330 (538)
++++|+++|+|+ ++||+||.++ ..|.|+||++|+.++ .|+|+.. ..+|.|++++|.||++.+..
T Consensus 121 ~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~g~l~fGg~d~~~~~g~l~~~pi~~----~~~w~v~l~~i~v~g~~~~~~ 196 (316)
T cd05486 121 TPVFDNMMAQNLVELPMFSVYMSRNPNSADGGELVFGGFDTSRFSGQLNWVPVTV----QGYWQIQLDNIQVGGTVIFCS 196 (316)
T ss_pred CCHHHHHHhcCCCCCCEEEEEEccCCCCCCCcEEEEcccCHHHcccceEEEECCC----ceEEEEEeeEEEEecceEecC
Confidence 578999999997 8999999853 369999999998764 4888743 37999999999999988752
Q ss_pred CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEE
Q 009271 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (538)
Q Consensus 331 ~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~ 410 (538)
....+||||||++++||+++|++|.+++... . . +.+|..+|.....+|+|+|+| +|..+++++++|++
T Consensus 197 ~~~~aiiDTGTs~~~lP~~~~~~l~~~~~~~----~--~-----~~~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~ 264 (316)
T cd05486 197 DGCQAIVDTGTSLITGPSGDIKQLQNYIGAT----A--T-----DGEYGVDCSTLSLMPSVTFTI-NGIPYSLSPQAYTL 264 (316)
T ss_pred CCCEEEECCCcchhhcCHHHHHHHHHHhCCc----c--c-----CCcEEEeccccccCCCEEEEE-CCEEEEeCHHHeEE
Confidence 4568999999999999999999998766421 1 1 124555665556799999999 67999999999998
Q ss_pred eecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 411 PENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 411 ~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
........+|+ +|+..+ ++.||||+.|||++|+|||.+++|||||+
T Consensus 265 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~flr~~y~vfD~~~~~IGfA~ 316 (316)
T cd05486 265 EDQSDGGGYCSSGFQGLDIPPPAGPLWILGDVFIRQYYSVFDRGNNRVGFAP 316 (316)
T ss_pred ecccCCCCEEeeEEEECCCCCCCCCeEEEchHHhcceEEEEeCCCCEeeccC
Confidence 75322256895 676532 34799999999999999999999999986
|
Cathepsin E is an intracellular, non-lysosomal aspartic protease expressed in a variety of cells and tissues. The protease has proposed physiological roles in antigen presentation by the MHC class II system, in the biogenesis of the vasoconstrictor peptide endothelin, and in neurodegeneration associated with brain ischemia and aging. Cathepsin E is the only A1 aspartic protease that exists as a homodimer with a disulfide bridge linking the two monomers. Like many other aspartic proteases, it is synthesized as a zymogen which is catalytically inactive towards its natural substrates at neutral pH and which auto-activates in an acidic environment. The overall structure follows the general fold of aspartic proteases of the A1 family, it is composed of two structurally similar beta barrel lobes, each lobe contributing an aspartic acid residue to form a catalytic dyad that acts to cleave the substrate peptide bond. The catalyt |
| >cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-51 Score=422.33 Aligned_cols=292 Identities=22% Similarity=0.387 Sum_probs=241.5
Q ss_pred ccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 107 YWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 107 ~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
+..|+++|.||||||++.|+|||||+++||+|. |. .|.+ .+.|+|++|+|++..
T Consensus 1 ~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~C~~------------~~~f~~~~SsT~~~~----------- 57 (318)
T cd05477 1 DMSYYGEISIGTPPQNFLVLFDTGSSNLWVPSVLCQSQACTN------------HTKFNPSQSSTYSTN----------- 57 (318)
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCCccEEEccCCCCCccccc------------cCCCCcccCCCceEC-----------
Confidence 357999999999999999999999999999997 75 3532 468999999999853
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCC---
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD--- 260 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~--- 260 (538)
.|.|++.|++| + +.|.+++|+|+|++. ..+++.|||++...+........+||||||+..
T Consensus 58 -------~~~~~~~Yg~G-s-~~G~~~~D~i~~g~~--------~i~~~~Fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 120 (318)
T cd05477 58 -------GETFSLQYGSG-S-LTGIFGYDTVTVQGI--------IITNQEFGLSETEPGTNFVYAQFDGILGLAYPSISA 120 (318)
T ss_pred -------CcEEEEEECCc-E-EEEEEEeeEEEECCE--------EEcCEEEEEEEecccccccccceeeEeecCcccccc
Confidence 48999999996 3 799999999999874 357899999998766432223569999999853
Q ss_pred ---CChHHHHHhcCCCC-CceEEeecCC---CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEee
Q 009271 261 ---VSVPSLLAKAGLIQ-NSFSICFDEN---DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCLT 329 (538)
Q Consensus 261 ---~Sl~sqL~~~g~i~-~~FS~cl~~~---~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~ 329 (538)
.++++||+++|+|. ++||+||.++ ..|.|+||++|+.++ .++|+.. ..+|.|++++|.||++.+.
T Consensus 121 ~~~~~~~~~L~~~g~i~~~~FS~~L~~~~~~~~g~l~fGg~d~~~~~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~ 196 (318)
T cd05477 121 GGATTVMQGMMQQNLLQAPIFSFYLSGQQGQQGGELVFGGVDNNLYTGQIYWTPVTS----ETYWQIGIQGFQINGQATG 196 (318)
T ss_pred cCCCCHHHHHHhcCCcCCCEEEEEEcCCCCCCCCEEEEcccCHHHcCCceEEEecCC----ceEEEEEeeEEEECCEEec
Confidence 57899999999996 9999999864 469999999998765 4788743 3799999999999999874
Q ss_pred --cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecce
Q 009271 330 --QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHI 407 (538)
Q Consensus 330 --~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~ 407 (538)
.....+||||||++++||+++|++|.+++..+... ..+|..+|.....+|.|+|+| +|.++.+++++
T Consensus 197 ~~~~~~~~iiDSGtt~~~lP~~~~~~l~~~~~~~~~~----------~~~~~~~C~~~~~~p~l~~~f-~g~~~~v~~~~ 265 (318)
T cd05477 197 WCSQGCQAIVDTGTSLLTAPQQVMSTLMQSIGAQQDQ----------YGQYVVNCNNIQNLPTLTFTI-NGVSFPLPPSA 265 (318)
T ss_pred ccCCCceeeECCCCccEECCHHHHHHHHHHhCCcccc----------CCCEEEeCCccccCCcEEEEE-CCEEEEECHHH
Confidence 23467999999999999999999999888654321 235666776666799999999 67999999999
Q ss_pred eEEeecCCcceEE-EEEEecC------CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 408 FSFPENEGFTVFC-LTVMSTD------GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 408 y~~~~~~~~~~~C-l~i~~~~------~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
|+... ..+| ++|++.. +..||||+.|||++|+|||++++|||||++
T Consensus 266 y~~~~----~~~C~~~i~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~ig~a~~ 318 (318)
T cd05477 266 YILQN----NGYCTVGIEPTYLPSQNGQPLWILGDVFLRQYYSVYDLGNNQVGFATA 318 (318)
T ss_pred eEecC----CCeEEEEEEecccCCCCCCceEEEcHHHhhheEEEEeCCCCEEeeeeC
Confidence 99874 3589 5887531 246999999999999999999999999985
|
Gastricsin is also called pepsinogen C. Gastricsins are produced in gastric mucosa of mammals. It is synthesized by the chief cells in the stomach as an inactive zymogen. It is self-converted to a mature enzyme under acidic conditions. Human gastricsin is distributed throughout all parts of the stomach. Gastricsin is synthesized as an inactive progastricsin that has an approximately 40 residue prosequence. It is self-converting to a mature enzyme being triggered by a drop in pH from neutrality to acidic conditions. Like other aspartic proteases, gastricsin are characterized by two catalytic aspartic residues at the active site, and display optimal activity at acidic pH. Mature enzyme has a pseudo-2-fold symmetry that passes through the active site between the catalytic aspartate residues. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic aspartate residue, with an exten |
| >cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-51 Score=421.12 Aligned_cols=289 Identities=27% Similarity=0.422 Sum_probs=236.4
Q ss_pred eeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC---CCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI---QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 101 ~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
++.|+.+..||++|.||||+|+|.|++||||+++||+|. |. .|.. ++.|+|++|+|++..
T Consensus 2 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~---- 65 (317)
T cd06098 2 ALKNYLDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSIACYF------------HSKYKSSKSSTYKKN---- 65 (317)
T ss_pred cccccCCCEEEEEEEECCCCeEEEEEECCCccceEEecCCCCCCccccc------------cCcCCcccCCCcccC----
Confidence 356888999999999999999999999999999999997 84 4643 368999999999854
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
.+.+.+.|++| ++.|.+++|+|+|++. ...++.|||++.+.+........||||||
T Consensus 66 --------------~~~~~i~Yg~G--~~~G~~~~D~v~ig~~--------~v~~~~f~~~~~~~~~~~~~~~~dGilGL 121 (317)
T cd06098 66 --------------GTSASIQYGTG--SISGFFSQDSVTVGDL--------VVKNQVFIEATKEPGLTFLLAKFDGILGL 121 (317)
T ss_pred --------------CCEEEEEcCCc--eEEEEEEeeEEEECCE--------EECCEEEEEEEecCCccccccccceeccc
Confidence 36789999986 3789999999999874 35789999998776543333467999999
Q ss_pred CCCCCC------hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEE
Q 009271 257 GLGDVS------VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESY 321 (538)
Q Consensus 257 G~~~~S------l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i 321 (538)
|+..++ ++.+|+++|+|+ ++||+||.++ ..|.|+||++|+.++ .|+|++. ..+|.|.+++|
T Consensus 122 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~pv~~----~~~w~v~l~~i 197 (317)
T cd06098 122 GFQEISVGKAVPVWYNMVEQGLVKEPVFSFWLNRNPDEEEGGELVFGGVDPKHFKGEHTYVPVTR----KGYWQFEMGDV 197 (317)
T ss_pred cccchhhcCCCCHHHHHHhcCCCCCCEEEEEEecCCCCCCCcEEEECccChhhcccceEEEecCc----CcEEEEEeCeE
Confidence 987654 456899999996 8999999753 469999999998875 4888853 36899999999
Q ss_pred EECCeEeec--CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 322 CIGNSCLTQ--SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 322 ~Vgg~~l~~--~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
.||++.+.. ....+||||||++++||++++++|. ....|+.. ..+|+|+|+| ||+
T Consensus 198 ~v~g~~~~~~~~~~~aivDTGTs~~~lP~~~~~~i~-----------------~~~~C~~~-----~~~P~i~f~f-~g~ 254 (317)
T cd06098 198 LIGGKSTGFCAGGCAAIADSGTSLLAGPTTIVTQIN-----------------SAVDCNSL-----SSMPNVSFTI-GGK 254 (317)
T ss_pred EECCEEeeecCCCcEEEEecCCcceeCCHHHHHhhh-----------------ccCCcccc-----ccCCcEEEEE-CCE
Confidence 999998652 4567999999999999998776553 11246643 4689999999 779
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
.+.|++++|++...++....|+ +|+..+ +..||||++|||+||+|||++++|||||+
T Consensus 255 ~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IlGd~Flr~~y~VfD~~~~~iGfA~ 317 (317)
T cd06098 255 TFELTPEQYILKVGEGAAAQCISGFTALDVPPPRGPLWILGDVFMGAYHTVFDYGNLRVGFAE 317 (317)
T ss_pred EEEEChHHeEEeecCCCCCEEeceEEECCCCCCCCCeEEechHHhcccEEEEeCCCCEEeecC
Confidence 9999999999876543356894 676432 34799999999999999999999999995
|
Phytepsin, a plant homolog of mammalian lysosomal pepsins, resides in grains, roots, stems, leaves and flowers. Phytepsin may participate in metabolic turnover and in protein processing events. In addition, it highly expressed in several plant tissues undergoing apoptosis. Phytepsin contains an internal region consisting of about 100 residues not present in animal or microbial pepsins. This region is thus called a plant specific insert. The insert is highly similar to saponins, which are lysosomal sphingolipid-activating proteins in mammalian cells. The saponin-like domain may have a role in the vacuolar targeting of phytepsin. Phytepsin, as its animal counterparts, possesses a topology typical of all aspartic proteases. They are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe has probably evolved fro |
| >cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=423.38 Aligned_cols=297 Identities=24% Similarity=0.381 Sum_probs=244.0
Q ss_pred eeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 101 ~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
++.|+.+..||++|.||||+|++.|++||||+++||+|. |. .|.. ++.|+|++|+|++..
T Consensus 2 ~l~n~~~~~Y~~~i~iGtp~q~~~v~~DTGSs~~wv~~~~C~~~~C~~------------~~~y~~~~Sst~~~~----- 64 (320)
T cd05488 2 PLTNYLNAQYFTDITLGTPPQKFKVILDTGSSNLWVPSVKCGSIACFL------------HSKYDSSASSTYKAN----- 64 (320)
T ss_pred cccccCCCEEEEEEEECCCCcEEEEEEecCCcceEEEcCCCCCcccCC------------cceECCCCCcceeeC-----
Confidence 355778899999999999999999999999999999998 85 4542 358999999999853
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
.|.|.+.|++| + ++|.+++|+++|++. ..+++.|||++.+.|........|||||||
T Consensus 65 -------------~~~~~~~y~~g-~-~~G~~~~D~v~ig~~--------~~~~~~f~~a~~~~g~~~~~~~~dGilGLg 121 (320)
T cd05488 65 -------------GTEFKIQYGSG-S-LEGFVSQDTLSIGDL--------TIKKQDFAEATSEPGLAFAFGKFDGILGLA 121 (320)
T ss_pred -------------CCEEEEEECCc-e-EEEEEEEeEEEECCE--------EECCEEEEEEecCCCcceeeeeeceEEecC
Confidence 48999999986 3 799999999999874 256899999988777543333579999999
Q ss_pred CCCCCh------HHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEEC
Q 009271 258 LGDVSV------PSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIG 324 (538)
Q Consensus 258 ~~~~Sl------~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vg 324 (538)
++..+. ..+|.++|+|. ++||+||.+. ..|.|+||++|+.++ .|+|++. ..+|.|++++|.||
T Consensus 122 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~vg 197 (320)
T cd05488 122 YDTISVNKIVPPFYNMINQGLLDEPVFSFYLGSSEEDGGEATFGGIDESRFTGKITWLPVRR----KAYWEVELEKIGLG 197 (320)
T ss_pred CccccccCCCCHHHHHHhcCCCCCCEEEEEecCCCCCCcEEEECCcCHHHcCCceEEEeCCc----CcEEEEEeCeEEEC
Confidence 987654 34788999996 8999999864 579999999998654 4888753 36899999999999
Q ss_pred CeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 325 g~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
++.+......+||||||++++||++++++|.+++.+.. ....+|..+|.....+|.|+|+| +|+++.|+
T Consensus 198 ~~~~~~~~~~~ivDSGtt~~~lp~~~~~~l~~~~~~~~----------~~~~~~~~~C~~~~~~P~i~f~f-~g~~~~i~ 266 (320)
T cd05488 198 DEELELENTGAAIDTGTSLIALPSDLAEMLNAEIGAKK----------SWNGQYTVDCSKVDSLPDLTFNF-DGYNFTLG 266 (320)
T ss_pred CEEeccCCCeEEEcCCcccccCCHHHHHHHHHHhCCcc----------ccCCcEEeeccccccCCCEEEEE-CCEEEEEC
Confidence 99887667789999999999999999999887764321 11335666776656799999999 67999999
Q ss_pred cceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 405 NHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
+++|++.. ...|+ .+...+ ++.||||++|||++|+|||++++|||||+
T Consensus 267 ~~~y~~~~----~g~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iG~a~ 320 (320)
T cd05488 267 PFDYTLEV----SGSCISAFTGMDFPEPVGPLAIVGDAFLRKYYSVYDLGNNAVGLAK 320 (320)
T ss_pred HHHheecC----CCeEEEEEEECcCCCCCCCeEEEchHHhhheEEEEeCCCCEEeecC
Confidence 99999853 34796 555432 24799999999999999999999999986
|
Fungal Proteinase A, a proteolytic enzyme distributed among a variety of organisms, is a member of the aspartic proteinase superfamily. In Saccharomyces cerevisiae, targeted to the vacuole as a zymogen, activation of proteinases A at acidic pH can occur by two different pathways: a one-step process to release mature proteinase A, involving the intervention of proteinase B, or a step-wise pathway via the auto-activation product known as pseudo-proteinase A. Once active, S. cerevisiae proteinase A is essential to the activities of other yeast vacuolar hydrolases, including proteinase B and carboxypeptidase Y. The mature enzyme is bilobal, with each lobe providing one of the two catalytically essential aspartic acid residues in the active site. The crystal structure of free proteinase A shows that flap loop is atypically pointing directly into the S(1) pocket of the enzyme. Proteinase A preferentially hydro |
| >cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-51 Score=421.05 Aligned_cols=301 Identities=23% Similarity=0.403 Sum_probs=241.7
Q ss_pred ccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCC
Q 009271 103 GNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKS 181 (538)
Q Consensus 103 ~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 181 (538)
.|+.+.+||++|.||||+|++.|++||||+++||+|. |..|... |..++.|+|++|+|++..
T Consensus 2 ~~~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~--------c~~~~~y~~~~SsT~~~~--------- 64 (326)
T cd05487 2 TNYLDTQYYGEIGIGTPPQTFKVVFDTGSSNLWVPSSKCSPLYTA--------CVTHNLYDASDSSTYKEN--------- 64 (326)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEeCCccceEEccCCCcCcchh--------hcccCcCCCCCCeeeeEC---------
Confidence 3778899999999999999999999999999999987 7653211 113468999999999954
Q ss_pred CCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecC-CCCCCCCCceEEeeCCCC
Q 009271 182 RSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG-SYLDGAAPDGVMGLGLGD 260 (538)
Q Consensus 182 ~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g-~~~~~~~~dGIlGLG~~~ 260 (538)
.|.|++.|++| ++.|.+++|+|+|++.. + ++.|||.....+ .|. ....|||||||++.
T Consensus 65 ---------~~~~~~~Yg~g--~~~G~~~~D~v~~g~~~--------~-~~~fg~~~~~~~~~~~-~~~~dGilGLg~~~ 123 (326)
T cd05487 65 ---------GTEFTIHYASG--TVKGFLSQDIVTVGGIP--------V-TQMFGEVTALPAIPFM-LAKFDGVLGMGYPK 123 (326)
T ss_pred ---------CEEEEEEeCCc--eEEEEEeeeEEEECCEE--------e-eEEEEEEEeccCCccc-eeecceEEecCChh
Confidence 48999999996 48999999999998752 2 467999887643 222 22579999999876
Q ss_pred C------ChHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECC
Q 009271 261 V------SVPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGN 325 (538)
Q Consensus 261 ~------Sl~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg 325 (538)
. +++.+|+++|+|+ ++||+||.++ ..|.|+||++|+.++. ++|+. ...+|.|++++|.||+
T Consensus 124 ~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~y~g~l~~~~~~----~~~~w~v~l~~i~vg~ 199 (326)
T cd05487 124 QAIGGVTPVFDNIMSQGVLKEDVFSVYYSRDSSHSLGGEIVLGGSDPQHYQGDFHYINTS----KTGFWQIQMKGVSVGS 199 (326)
T ss_pred hcccCCCCHHHHHHhcCCCCCCEEEEEEeCCCCCCCCcEEEECCcChhhccCceEEEECC----cCceEEEEecEEEECC
Confidence 4 4677899999996 9999999863 4699999999998764 44442 2479999999999999
Q ss_pred eEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 326 SCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 326 ~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
+.+.. ....+||||||++++||+++|++|.+++..+.. ..+|..+|.....+|.|+|+| |+..+.|+
T Consensus 200 ~~~~~~~~~~aiiDSGts~~~lP~~~~~~l~~~~~~~~~-----------~~~y~~~C~~~~~~P~i~f~f-gg~~~~v~ 267 (326)
T cd05487 200 STLLCEDGCTAVVDTGASFISGPTSSISKLMEALGAKER-----------LGDYVVKCNEVPTLPDISFHL-GGKEYTLS 267 (326)
T ss_pred EEEecCCCCEEEECCCccchhCcHHHHHHHHHHhCCccc-----------CCCEEEeccccCCCCCEEEEE-CCEEEEeC
Confidence 98753 345799999999999999999999887753221 124555665556789999999 77999999
Q ss_pred cceeEEeecCCcceEE-EEEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 405 NHIFSFPENEGFTVFC-LTVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~C-l~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
+++|++...+....+| ++|+..+ ++.||||+.|||++|+|||++++|||||++
T Consensus 268 ~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~flr~~y~vfD~~~~~IGfA~a 326 (326)
T cd05487 268 SSDYVLQDSDFSDKLCTVAFHAMDIPPPTGPLWVLGATFIRKFYTEFDRQNNRIGFALA 326 (326)
T ss_pred HHHhEEeccCCCCCEEEEEEEeCCCCCCCCCeEEEehHHhhccEEEEeCCCCEEeeeeC
Confidence 9999998654335789 5787532 347999999999999999999999999985
|
Renin, also known as angiotensinogenase, is a circulating enzyme that participates in the renin-angiotensin system that mediates extracellular volume, arterial vasoconstriction, and consequently mean arterial blood pressure. The enzyme is secreted by the kidneys from specialized juxtaglomerular cells in response to decreases in glomerular filtration rate (a consequence of low blood volume), diminished filtered sodium chloride and sympathetic nervous system innervation. The enzyme circulates in the blood stream and hydrolyzes angiotensinogen secreted from the liver into the peptide angiotensin I. Angiotensin I is further cleaved in the lungs by endothelial bound angiotensin converting enzyme (ACE) into angiotensin II, the final active peptide. Renin is a member of the aspartic protease family. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Aspartate r |
| >cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-50 Score=405.50 Aligned_cols=260 Identities=30% Similarity=0.610 Sum_probs=219.4
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeEecC--CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 009271 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ--CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCK 186 (538)
Q Consensus 109 ~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~--C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 186 (538)
.||++|.||||||++.|++||||+++||+|. |..|
T Consensus 2 ~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~c~~~c~~c------------------------------------------- 38 (273)
T cd05475 2 YYYVTINIGNPPKPYFLDIDTGSDLTWLQCDAPCTGC------------------------------------------- 38 (273)
T ss_pred ceEEEEEcCCCCeeEEEEEccCCCceEEeCCCCCCCC-------------------------------------------
Confidence 5999999999999999999999999999983 4333
Q ss_pred CCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCC-CCCCCceEEeeCCCCCChHH
Q 009271 187 SLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYL-DGAAPDGVMGLGLGDVSVPS 265 (538)
Q Consensus 187 ~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~-~~~~~dGIlGLG~~~~Sl~s 265 (538)
.|.|++.|+|+ +++.|.+++|+|+|+...+. ...+++.|||+..+.+.+. .....|||||||++++|+++
T Consensus 39 ----~c~~~i~Ygd~-~~~~G~~~~D~v~~~~~~~~----~~~~~~~Fgc~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ 109 (273)
T cd05475 39 ----QCDYEIEYADG-GSSMGVLVTDIFSLKLTNGS----RAKPRIAFGCGYDQQGPLLNPPPPTDGILGLGRGKISLPS 109 (273)
T ss_pred ----cCccEeEeCCC-CceEEEEEEEEEEEeecCCC----cccCCEEEEeeeccCCcccCCCccCCEEEECCCCCCCHHH
Confidence 28899999986 68899999999999754221 2357899999988776542 23367999999999999999
Q ss_pred HHHhcCCCCCceEEeecCCCCccEEeCCCCCC--CceeeeeeecCCCCceEEEeEeEEEECCeEeecCCceEEEcCCCcc
Q 009271 266 LLAKAGLIQNSFSICFDENDSGSVFFGDQGPA--TQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASF 343 (538)
Q Consensus 266 qL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~--~~~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~~~~~aiiDSGTs~ 343 (538)
||+++++|+++||+||.++..|.|+||+.... ...|+|+..... ..+|.|++++|+||++.+......+||||||++
T Consensus 110 ql~~~~~i~~~Fs~~l~~~~~g~l~~G~~~~~~g~i~ytpl~~~~~-~~~y~v~l~~i~vg~~~~~~~~~~~ivDTGTt~ 188 (273)
T cd05475 110 QLASQGIIKNVIGHCLSSNGGGFLFFGDDLVPSSGVTWTPMRRESQ-KKHYSPGPASLLFNGQPTGGKGLEVVFDSGSSY 188 (273)
T ss_pred HHHhcCCcCceEEEEccCCCCeEEEECCCCCCCCCeeecccccCCC-CCeEEEeEeEEEECCEECcCCCceEEEECCCce
Confidence 99999999999999999877799999965332 356999975432 369999999999999976656678999999999
Q ss_pred ccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCC---eeeeeecceeEEeecCCcceEE
Q 009271 344 TFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKN---QSFVVRNHIFSFPENEGFTVFC 420 (538)
Q Consensus 344 t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg---~~~~v~~~~y~~~~~~~~~~~C 420 (538)
++||+++| +|+|+|+|+++ +++++++++|++...+ +..|
T Consensus 189 t~lp~~~y------------------------------------~p~i~~~f~~~~~~~~~~l~~~~y~~~~~~--~~~C 230 (273)
T cd05475 189 TYFNAQAY------------------------------------FKPLTLKFGKGWRTRLLEIPPENYLIISEK--GNVC 230 (273)
T ss_pred EEcCCccc------------------------------------cccEEEEECCCCceeEEEeCCCceEEEcCC--CCEE
Confidence 99999877 58999999764 6999999999987543 5689
Q ss_pred EEEEecC----CCceeEcceeeeeeEEEEeCCCCEEEEeecCC
Q 009271 421 LTVMSTD----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459 (538)
Q Consensus 421 l~i~~~~----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C 459 (538)
++++... .+.||||+.|||++|+|||++++||||++++|
T Consensus 231 l~~~~~~~~~~~~~~ilG~~~l~~~~~vfD~~~~riGfa~~~C 273 (273)
T cd05475 231 LGILNGSEIGLGNTNIIGDISMQGLMVIYDNEKQQIGWVRSDC 273 (273)
T ss_pred EEEecCCCcCCCceEEECceEEEeeEEEEECcCCEeCcccCCC
Confidence 9987653 24799999999999999999999999999999
|
Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more d |
| >cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-50 Score=420.45 Aligned_cols=313 Identities=20% Similarity=0.256 Sum_probs=240.1
Q ss_pred cEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 009271 108 WLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCK 186 (538)
Q Consensus 108 ~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~ 186 (538)
..||++|.||||+|+|.|+|||||+++||+|. |..| ++.|+|++|+|++..
T Consensus 2 ~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~~~~~--------------~~~f~~~~SsT~~~~-------------- 53 (364)
T cd05473 2 QGYYIEMLIGTPPQKLNILVDTGSSNFAVAAAPHPFI--------------HTYFHRELSSTYRDL-------------- 53 (364)
T ss_pred CceEEEEEecCCCceEEEEEecCCcceEEEcCCCccc--------------cccCCchhCcCcccC--------------
Confidence 46999999999999999999999999999997 5322 358999999999965
Q ss_pred CCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC-----
Q 009271 187 SLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV----- 261 (538)
Q Consensus 187 ~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~----- 261 (538)
.|.|+++|++| ++.|.+++|+|+|++.. .....+.|++.....+.+..+...|||||||++.+
T Consensus 54 ----~~~~~i~Yg~G--s~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~l~~~~~ 121 (364)
T cd05473 54 ----GKGVTVPYTQG--SWEGELGTDLVSIPKGP------NVTFRANIAAITESENFFLNGSNWEGILGLAYAELARPDS 121 (364)
T ss_pred ----CceEEEEECcc--eEEEEEEEEEEEECCCC------ccceEEeeEEEeccccceecccccceeeeecccccccCCC
Confidence 38999999986 46899999999998531 11233456777666665544446799999998765
Q ss_pred ---ChHHHHHhcCCCCCceEEeecC-----------CCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEE
Q 009271 262 ---SVPSLLAKAGLIQNSFSICFDE-----------NDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCI 323 (538)
Q Consensus 262 ---Sl~sqL~~~g~i~~~FS~cl~~-----------~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~V 323 (538)
+++.+|.+|+.++++||++|.. ...|.|+||++|+.++ .|+|++. ..+|.|.+++|.|
T Consensus 122 ~~~~~~~~l~~q~~~~~~FS~~l~~~~~~~~~~~~~~~~g~l~fGg~D~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 197 (364)
T cd05473 122 SVEPFFDSLVKQTGIPDVFSLQMCGAGLPVNGSASGTVGGSMVIGGIDPSLYKGDIWYTPIRE----EWYYEVIILKLEV 197 (364)
T ss_pred CCCCHHHHHHhccCCccceEEEecccccccccccccCCCcEEEeCCcCHhhcCCCceEEecCc----ceeEEEEEEEEEE
Confidence 4567899998888899998741 1369999999998764 4889853 3689999999999
Q ss_pred CCeEeecC-----CceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccc--cccccccccccccccccCccEEEEEc
Q 009271 324 GNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDMRLIFS 396 (538)
Q Consensus 324 gg~~l~~~-----~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~it~~f~ 396 (538)
|++.+... ...+||||||++++||+++|++|.+++.++......... ......|+.........+|+|+|+|+
T Consensus 198 g~~~~~~~~~~~~~~~~ivDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~ 277 (364)
T cd05473 198 GGQSLNLDCKEYNYDKAIVDSGTTNLRLPVKVFNAAVDAIKAASLIEDFPDGFWLGSQLACWQKGTTPWEIFPKISIYLR 277 (364)
T ss_pred CCEecccccccccCccEEEeCCCcceeCCHHHHHHHHHHHHhhcccccCCccccCcceeecccccCchHhhCCcEEEEEc
Confidence 99988632 135999999999999999999999999887543211111 01123687654333346999999997
Q ss_pred CC-----eeeeeecceeEEeecC-CcceEEEEEEec-CCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcccc
Q 009271 397 KN-----QSFVVRNHIFSFPENE-GFTVFCLTVMST-DGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVID 464 (538)
Q Consensus 397 gg-----~~~~v~~~~y~~~~~~-~~~~~Cl~i~~~-~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~ 464 (538)
|+ .++.++++.|+..... +....|+++... ..+.||||+.|||++|+|||++++|||||+++|.+...
T Consensus 278 g~~~~~~~~l~l~p~~Y~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~~C~~~~~ 352 (364)
T cd05473 278 DENSSQSFRITILPQLYLRPVEDHGTQLDCYKFAISQSTNGTVIGAVIMEGFYVVFDRANKRVGFAVSTCAEHDG 352 (364)
T ss_pred cCCCCceEEEEECHHHhhhhhccCCCcceeeEEeeecCCCceEEeeeeEcceEEEEECCCCEEeeEecccccccC
Confidence 63 3678889999875432 124689754332 23579999999999999999999999999999987544
|
Beta-secretase also called BACE (beta-site of APP cleaving enzyme) or memapsin-2. Beta-secretase is an aspartic-acid protease important in the pathogenesis of Alzheimer's disease, and in the formation of myelin sheaths in peripheral nerve cells. It cleaves amyloid precursor protein (APP) to reveal the N-terminus of the beta-amyloid peptides. The beta-amyloid peptides are the major components of the amyloid plaques formed in the brain of patients with Alzheimer's disease (AD). Since BACE mediates one of the cleavages responsible for generation of AD, it is regarded as a potential target for pharmacological intervention in AD. Beta-secretase is a member of pepsin family of aspartic proteases. Same as other aspartic proteases, beta-secretase is a bilobal enzyme, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two |
| >PTZ00147 plasmepsin-1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=415.53 Aligned_cols=302 Identities=22% Similarity=0.336 Sum_probs=239.9
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQ--CAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 174 (538)
..+++.|+.+.+||++|.||||||+|.|++||||+++||+|. |.. |. .++.|||++|+|++..
T Consensus 128 ~~v~L~n~~n~~Y~~~I~IGTP~Q~f~Vi~DTGSsdlWVps~~C~~~~C~------------~~~~yd~s~SsT~~~~-- 193 (453)
T PTZ00147 128 DNVELKDLANVMSYGEAKLGDNGQKFNFIFDTGSANLWVPSIKCTTEGCE------------TKNLYDSSKSKTYEKD-- 193 (453)
T ss_pred CeeeccccCCCEEEEEEEECCCCeEEEEEEeCCCCcEEEeecCCCccccc------------CCCccCCccCcceEEC--
Confidence 456777888999999999999999999999999999999998 863 43 2468999999999864
Q ss_pred CCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCC--CCCCCCCce
Q 009271 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGS--YLDGAAPDG 252 (538)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~--~~~~~~~dG 252 (538)
.|.|++.|++| ++.|.+++|+|+|++.. .+ ..|+|.....+. +......||
T Consensus 194 ----------------~~~f~i~Yg~G--svsG~~~~DtVtiG~~~--------v~-~qF~~~~~~~~f~~~~~~~~~DG 246 (453)
T PTZ00147 194 ----------------GTKVEMNYVSG--TVSGFFSKDLVTIGNLS--------VP-YKFIEVTDTNGFEPFYTESDFDG 246 (453)
T ss_pred ----------------CCEEEEEeCCC--CEEEEEEEEEEEECCEE--------EE-EEEEEEEeccCcccccccccccc
Confidence 48899999996 48999999999998752 33 579998876652 223336799
Q ss_pred EEeeCCCCCC------hHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEe
Q 009271 253 VMGLGLGDVS------VPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 253 IlGLG~~~~S------l~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~ 319 (538)
|||||+++++ ++.+|+++|+|+ ++||+||.++ ..|.|+|||+|+.++ .|+|+.. ..+|.|.++
T Consensus 247 ILGLG~~~~S~~~~~p~~~~L~~qg~I~~~vFS~~L~~~~~~~G~L~fGGiD~~ky~G~l~y~pl~~----~~~W~V~l~ 322 (453)
T PTZ00147 247 IFGLGWKDLSIGSVDPYVVELKNQNKIEQAVFTFYLPPEDKHKGYLTIGGIEERFYEGPLTYEKLNH----DLYWQVDLD 322 (453)
T ss_pred eecccCCccccccCCCHHHHHHHcCCCCccEEEEEecCCCCCCeEEEECCcChhhcCCceEEEEcCC----CceEEEEEE
Confidence 9999998754 567999999997 8999999863 579999999998865 3788742 368999998
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
+.+|+... ....+||||||+++++|+++++++.+++.... ..........|+. ..+|+|+|+| +|.
T Consensus 323 -~~vg~~~~--~~~~aIiDSGTsli~lP~~~~~ai~~~l~~~~----~~~~~~y~~~C~~------~~lP~~~f~f-~g~ 388 (453)
T PTZ00147 323 -VHFGNVSS--EKANVIVDSGTSVITVPTEFLNKFVESLDVFK----VPFLPLYVTTCNN------TKLPTLEFRS-PNK 388 (453)
T ss_pred -EEECCEec--CceeEEECCCCchhcCCHHHHHHHHHHhCCee----cCCCCeEEEeCCC------CCCCeEEEEE-CCE
Confidence 57877543 45679999999999999999999988774321 1111111234553 3689999999 578
Q ss_pred eeeeecceeEEeecCCcceEE-EEEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 400 SFVVRNHIFSFPENEGFTVFC-LTVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~C-l~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
.+.|++++|+....+.....| +++++.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 389 ~~~L~p~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILGd~FLr~~YtVFD~~n~rIGfA~a~ 450 (453)
T PTZ00147 389 VYTLEPEYYLQPIEDIGSALCMLNIIPIDLEKNTFILGDPFMRKYFTVFDYDNHTVGFALAK 450 (453)
T ss_pred EEEECHHHheeccccCCCcEEEEEEEECCCCCCCEEECHHHhccEEEEEECCCCEEEEEEec
Confidence 899999999876443324689 5788754 3479999999999999999999999999986
|
|
| >PTZ00013 plasmepsin 4 (PM4); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-48 Score=410.26 Aligned_cols=302 Identities=19% Similarity=0.323 Sum_probs=236.7
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 174 (538)
..+++.++.+.+||++|.||||+|+|.|++||||+++||+|. |. .|.. .+.|+|++|+|++..
T Consensus 127 ~~~~l~d~~n~~Yy~~i~IGTP~Q~f~vi~DTGSsdlWV~s~~C~~~~C~~------------~~~yd~s~SsT~~~~-- 192 (450)
T PTZ00013 127 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCDSIGCSI------------KNLYDSSKSKSYEKD-- 192 (450)
T ss_pred CceeeeccCCCEEEEEEEECCCCeEEEEEEeCCCCceEEecccCCcccccc------------CCCccCccCcccccC--
Confidence 446677888899999999999999999999999999999998 85 4543 368999999999854
Q ss_pred CCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecC--CCCCCCCCce
Q 009271 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG--SYLDGAAPDG 252 (538)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g--~~~~~~~~dG 252 (538)
.|.|.+.|++| ++.|.+++|+|+|++.. . ...|||+....+ ........||
T Consensus 193 ----------------~~~~~i~YG~G--sv~G~~~~Dtv~iG~~~--------~-~~~f~~~~~~~~~~~~~~~~~~dG 245 (450)
T PTZ00013 193 ----------------GTKVDITYGSG--TVKGFFSKDLVTLGHLS--------M-PYKFIEVTDTDDLEPIYSSSEFDG 245 (450)
T ss_pred ----------------CcEEEEEECCc--eEEEEEEEEEEEECCEE--------E-ccEEEEEEeccccccceecccccc
Confidence 48999999986 38999999999998752 2 357888876543 2222336799
Q ss_pred EEeeCCCCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEe
Q 009271 253 VMGLGLGDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 253 IlGLG~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~ 319 (538)
|||||++.+ +++.+|+++|+|+ ++||+||.++ ..|.|+|||+|+.++. |+|+.. ..+|.|.++
T Consensus 246 IlGLg~~~~s~~~~~p~~~~L~~qg~I~~~vFS~~L~~~~~~~G~L~fGGiD~~~y~G~L~y~pv~~----~~yW~I~l~ 321 (450)
T PTZ00013 246 ILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD 321 (450)
T ss_pred eecccCCccccccCCCHHHHHHhccCcCCcEEEEEecCCCCCCCEEEECCcCccccccceEEEEcCc----CceEEEEEE
Confidence 999999865 4678999999997 8999999853 5799999999988753 888742 368999998
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
+.+|.... ....+||||||+++++|+++++++.+++... ...........|+. ..+|+|+|+| +|.
T Consensus 322 -v~~G~~~~--~~~~aIlDSGTSli~lP~~~~~~i~~~l~~~----~~~~~~~y~~~C~~------~~lP~i~F~~-~g~ 387 (450)
T PTZ00013 322 -VHFGKQTM--QKANVIVDSGTTTITAPSEFLNKFFANLNVI----KVPFLPFYVTTCDN------KEMPTLEFKS-ANN 387 (450)
T ss_pred -EEECceec--cccceEECCCCccccCCHHHHHHHHHHhCCe----ecCCCCeEEeecCC------CCCCeEEEEE-CCE
Confidence 77775543 3567999999999999999999888766421 11111111234542 3689999999 668
Q ss_pred eeeeecceeEEeecCCcceEE-EEEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 400 SFVVRNHIFSFPENEGFTVFC-LTVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~C-l~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++.+++++|+.......+..| +++++.+ ++.||||+.|||++|+|||++++|||||+++
T Consensus 388 ~~~L~p~~Yi~~~~~~~~~~C~~~i~~~~~~~~~~ILGd~FLr~~Y~VFD~~n~rIGfA~a~ 449 (450)
T PTZ00013 388 TYTLEPEYYMNPLLDVDDTLCMITMLPVDIDDNTFILGDPFMRKYFTVFDYDKESVGFAIAK 449 (450)
T ss_pred EEEECHHHheehhccCCCCeeEEEEEECCCCCCCEEECHHHhccEEEEEECCCCEEEEEEeC
Confidence 999999999875322224689 5777654 3479999999999999999999999999875
|
|
| >cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-48 Score=389.84 Aligned_cols=247 Identities=29% Similarity=0.546 Sum_probs=215.3
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCC
Q 009271 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSL 188 (538)
Q Consensus 109 ~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 188 (538)
.||++|.||||+|++.|++||||+++||+|
T Consensus 1 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~-------------------------------------------------- 30 (265)
T cd05476 1 EYLVTLSIGTPPQPFSLIVDTGSDLTWTQC-------------------------------------------------- 30 (265)
T ss_pred CeEEEEecCCCCcceEEEecCCCCCEEEcC--------------------------------------------------
Confidence 389999999999999999999999999974
Q ss_pred CCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCChHHHHH
Q 009271 189 KDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLA 268 (538)
Q Consensus 189 ~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~Sl~sqL~ 268 (538)
|.|.+.|+|+ +.++|.+++|+|+|++.. ...+++.|||++.+.+ +.. ...+||||||+...|+++||.
T Consensus 31 ---~~~~~~Y~dg-~~~~G~~~~D~v~~g~~~------~~~~~~~Fg~~~~~~~-~~~-~~~~GIlGLg~~~~s~~~ql~ 98 (265)
T cd05476 31 ---CSYEYSYGDG-SSTSGVLATETFTFGDSS------VSVPNVAFGCGTDNEG-GSF-GGADGILGLGRGPLSLVSQLG 98 (265)
T ss_pred ---CceEeEeCCC-ceeeeeEEEEEEEecCCC------CccCCEEEEecccccC-Ccc-CCCCEEEECCCCcccHHHHhh
Confidence 5789999985 789999999999998752 1368899999999887 332 367999999999999999999
Q ss_pred hcCCCCCceEEeecC----CCCccEEeCCCCCC---CceeeeeeecCCCCceEEEeEeEEEECCeEee----------cC
Q 009271 269 KAGLIQNSFSICFDE----NDSGSVFFGDQGPA---TQQSTSFLPIGEKYDAYFVGVESYCIGNSCLT----------QS 331 (538)
Q Consensus 269 ~~g~i~~~FS~cl~~----~~~G~l~fG~~d~~---~~~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~----------~~ 331 (538)
.++ ++||+||.+ +..|+|+||++|+. ...|+|++..+....+|.|+|++|+||++.+. ..
T Consensus 99 ~~~---~~Fs~~l~~~~~~~~~G~l~fGg~d~~~~~~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~ 175 (265)
T cd05476 99 STG---NKFSYCLVPHDDTGGSSPLILGDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDG 175 (265)
T ss_pred ccc---CeeEEEccCCCCCCCCCeEEECCcccccCCCceEeecccCCCCCCceEeeeEEEEECCEEecCCchhcccccCC
Confidence 887 899999986 35799999999984 45699998754345789999999999999874 24
Q ss_pred CceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEEe
Q 009271 332 GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFP 411 (538)
Q Consensus 332 ~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~ 411 (538)
...+||||||++++||+++| |+|+|+|+|+.+|.+++++|++.
T Consensus 176 ~~~ai~DTGTs~~~lp~~~~-------------------------------------P~i~~~f~~~~~~~i~~~~y~~~ 218 (265)
T cd05476 176 SGGTIIDSGTTLTYLPDPAY-------------------------------------PDLTLHFDGGADLELPPENYFVD 218 (265)
T ss_pred CCcEEEeCCCcceEcCcccc-------------------------------------CCEEEEECCCCEEEeCcccEEEE
Confidence 56799999999999999987 88999997689999999999986
Q ss_pred ecCCcceEEEEEEec-CCCceeEcceeeeeeEEEEeCCCCEEEEeecCC
Q 009271 412 ENEGFTVFCLTVMST-DGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459 (538)
Q Consensus 412 ~~~~~~~~Cl~i~~~-~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C 459 (538)
... +.+|++++.. ..+.+|||++|||++|+|||++++|||||+++|
T Consensus 219 ~~~--~~~C~~~~~~~~~~~~ilG~~fl~~~~~vFD~~~~~iGfa~~~C 265 (265)
T cd05476 219 VGE--GVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265 (265)
T ss_pred CCC--CCEEEEEecCCCCCcEEEChhhcccEEEEEECCCCEEeeecCCC
Confidence 543 6799999887 456899999999999999999999999999999
|
This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which |
| >cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=383.99 Aligned_cols=263 Identities=22% Similarity=0.338 Sum_probs=216.9
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCC
Q 009271 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSL 188 (538)
Q Consensus 110 yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 188 (538)
||++|.||||+|++.|+|||||+++||+|. |..|.... ...|+|++|+|++.++
T Consensus 1 Y~~~i~vGtP~Q~~~v~~DTGS~~~wv~~~~c~~~~~~~----------~~~y~~~~Sst~~~~~--------------- 55 (278)
T cd06097 1 YLTPVKIGTPPQTLNLDLDTGSSDLWVFSSETPAAQQGG----------HKLYDPSKSSTAKLLP--------------- 55 (278)
T ss_pred CeeeEEECCCCcEEEEEEeCCCCceeEeeCCCCchhhcc----------CCcCCCccCccceecC---------------
Confidence 789999999999999999999999999998 88775432 4679999999998642
Q ss_pred CCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC-------
Q 009271 189 KDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV------- 261 (538)
Q Consensus 189 ~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~------- 261 (538)
.|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++...+.+......|||||||+..+
T Consensus 56 --~~~~~i~Y~~G-~~~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~dGilGLg~~~~~~~~~~~ 124 (278)
T cd06097 56 --GATWSISYGDG-SSASGIVYTDTVSIGGV--------EVPNQAIELATAVSASFFSDTASDGLLGLAFSSINTVQPPK 124 (278)
T ss_pred --CcEEEEEeCCC-CeEEEEEEEEEEEECCE--------EECCeEEEEEeecCccccccccccceeeeccccccccccCC
Confidence 48999999996 67899999999999874 3578999999988775444457899999998764
Q ss_pred --ChHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEe-ecCCce
Q 009271 262 --SVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCL-TQSGFQ 334 (538)
Q Consensus 262 --Sl~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l-~~~~~~ 334 (538)
++..+|.+++. +++||+||.++..|+|+|||+|+.++ .|+|++.. ..+|.|++++|.||++.. ......
T Consensus 125 ~~~~~~~l~~~~~-~~~Fs~~l~~~~~G~l~fGg~D~~~~~g~l~~~pi~~~---~~~w~v~l~~i~v~~~~~~~~~~~~ 200 (278)
T cd06097 125 QKTFFENALSSLD-APLFTADLRKAAPGFYTFGYIDESKYKGEISWTPVDNS---SGFWQFTSTSYTVGGDAPWSRSGFS 200 (278)
T ss_pred CCCHHHHHHHhcc-CceEEEEecCCCCcEEEEeccChHHcCCceEEEEccCC---CcEEEEEEeeEEECCcceeecCCce
Confidence 35667887764 78999999977789999999998654 48887542 369999999999999843 345678
Q ss_pred EEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEEeecC
Q 009271 335 ALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENE 414 (538)
Q Consensus 335 aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~~ 414 (538)
+||||||+++++|++++++|.+++.... . .....+|.++|+.. +|+|+|+|
T Consensus 201 ~iiDSGTs~~~lP~~~~~~l~~~l~g~~----~----~~~~~~~~~~C~~~--~P~i~f~~------------------- 251 (278)
T cd06097 201 AIADTGTTLILLPDAIVEAYYSQVPGAY----Y----DSEYGGWVFPCDTT--LPDLSFAV------------------- 251 (278)
T ss_pred EEeecCCchhcCCHHHHHHHHHhCcCCc----c----cCCCCEEEEECCCC--CCCEEEEE-------------------
Confidence 9999999999999999999987763111 0 01134677778643 89999999
Q ss_pred CcceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 415 GFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 415 ~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
.||||++|||++|+|||++|+|||||+
T Consensus 252 ---------------~~ilGd~fl~~~y~vfD~~~~~ig~A~ 278 (278)
T cd06097 252 ---------------FSILGDVFLKAQYVVFDVGGPKLGFAP 278 (278)
T ss_pred ---------------EEEEcchhhCceeEEEcCCCceeeecC
Confidence 599999999999999999999999985
|
The members of this family are aspartic proteases of fungal origin, including aspergillopepsin, rhizopuspepsin, endothiapepsin, and rodosporapepsin. The various fungal species in this family may be the most economically important genus of fungi. They may serve as virulence factors or as industrial aids. For example, Aspergillopepsin from A. fumigatus is involved in invasive aspergillosis owing to its elastolytic activity and Aspergillopepsins from the mold A. saitoi are used in fermentation industry. Aspartic proteinases are a group of proteolytic enzymes in which the scissile peptide bond is attacked by a nucleophilic water molecule activated by two aspartic residues in a DT(S)G motif at the active site. They have a similar fold composed of two beta-barrel domains. Between the N-terminal and C-terminal domains, each of which contributes one catalytic aspartic residue, there is an extended active- |
| >cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=374.96 Aligned_cols=267 Identities=24% Similarity=0.424 Sum_probs=221.5
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCC
Q 009271 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSL 188 (538)
Q Consensus 109 ~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 188 (538)
+|+++|.||||+|++.|++||||+++||+
T Consensus 2 ~Y~~~i~iGtp~q~~~v~~DTgS~~~wv~--------------------------------------------------- 30 (295)
T cd05474 2 YYSAELSVGTPPQKVTVLLDTGSSDLWVP--------------------------------------------------- 30 (295)
T ss_pred eEEEEEEECCCCcEEEEEEeCCCCcceee---------------------------------------------------
Confidence 68999999999999999999999999994
Q ss_pred CCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC-------
Q 009271 189 KDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV------- 261 (538)
Q Consensus 189 ~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~------- 261 (538)
.|++.|++| +++.|.+++|+|+|++. ...++.|||+++.. ..+||||||+.+.
T Consensus 31 ----~~~~~Y~~g-~~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~ 90 (295)
T cd05474 31 ----DFSISYGDG-TSASGTWGTDTVSIGGA--------TVKNLQFAVANSTS-------SDVGVLGIGLPGNEATYGTG 90 (295)
T ss_pred ----eeEEEeccC-CcEEEEEEEEEEEECCe--------EecceEEEEEecCC-------CCcceeeECCCCCcccccCC
Confidence 378899985 68999999999999875 25789999998832 4589999999886
Q ss_pred ----ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCC--CCceEEEeEeEEEECCeEe
Q 009271 262 ----SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGE--KYDAYFVGVESYCIGNSCL 328 (538)
Q Consensus 262 ----Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~--~~~~y~V~l~~i~Vgg~~l 328 (538)
+++.||.++|+|+ ++||+||.+. ..|.|+||++|..++ .++|++.... ...+|.|++++|.|+++.+
T Consensus 91 ~~~~s~~~~L~~~g~i~~~~Fsl~l~~~~~~~g~l~~Gg~d~~~~~g~~~~~p~~~~~~~~~~~~~~v~l~~i~v~~~~~ 170 (295)
T cd05474 91 YTYPNFPIALKKQGLIKKNAYSLYLNDLDASTGSILFGGVDTAKYSGDLVTLPIVNDNGGSEPSELSVTLSSISVNGSSG 170 (295)
T ss_pred CcCCCHHHHHHHCCcccceEEEEEeCCCCCCceeEEEeeeccceeeceeEEEeCcCcCCCCCceEEEEEEEEEEEEcCCC
Confidence 7999999999996 9999999874 579999999998764 4888875432 2378999999999999886
Q ss_pred e----cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 329 T----QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 329 ~----~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
. .....+||||||++++||+++|++|.+++.+..... ....+..|+. ... |.|+|+| +|.++.++
T Consensus 171 ~~~~~~~~~~~iiDSGt~~~~lP~~~~~~l~~~~~~~~~~~----~~~~~~~C~~-----~~~-p~i~f~f-~g~~~~i~ 239 (295)
T cd05474 171 NTTLLSKNLPALLDSGTTLTYLPSDIVDAIAKQLGATYDSD----EGLYVVDCDA-----KDD-GSLTFNF-GGATISVP 239 (295)
T ss_pred cccccCCCccEEECCCCccEeCCHHHHHHHHHHhCCEEcCC----CcEEEEeCCC-----CCC-CEEEEEE-CCeEEEEE
Confidence 3 245679999999999999999999999887654321 1122334544 334 9999999 56999999
Q ss_pred cceeEEeecC--CcceEE-EEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 405 NHIFSFPENE--GFTVFC-LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 405 ~~~y~~~~~~--~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
+++|++.... ....+| ++|++.+.+.||||++||+++|+|||.+++|||||++
T Consensus 240 ~~~~~~~~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~ig~a~a 295 (295)
T cd05474 240 LSDLVLPASTDDGGDGACYLGIQPSTSDYNILGDTFLRSAYVVYDLDNNEISLAQA 295 (295)
T ss_pred HHHhEeccccCCCCCCCeEEEEEeCCCCcEEeChHHhhcEEEEEECCCCEEEeecC
Confidence 9999987642 235789 7898876568999999999999999999999999985
|
SAPs (Secreted aspartic proteinases) are secreted from a group of pathogenic fungi, predominantly Candida species. They are secreted from the pathogen to degrade host proteins. SAP is one of the most significant extracellular hydrolytic enzymes produced by C. albicans. SAP proteins, encoded by a family of 10 SAP genes. All 10 SAP genes of C. albicans encode preproenzymes, approximately 60 amino acid longer than the mature enzyme, which are processed when transported via the secretory pathway. The mature enzymes contain sequence motifs typical for all aspartyl proteinases, including the two conserved aspartate residues other active site and conserved cysteine residues implicated in the maintenance of the three-dimensional structure. Most Sap proteins contain putative N-glycosylation sites, but it remains to be determined which Sap proteins are glycosylated. This family of aspartate proteases |
| >PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=376.60 Aligned_cols=296 Identities=28% Similarity=0.521 Sum_probs=243.5
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCC
Q 009271 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKS 187 (538)
Q Consensus 109 ~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~ 187 (538)
.|+++|.||||+|++.|++||||+.+||++. |..|.. |.....|++.+|+|++...
T Consensus 1 ~Y~~~v~iGtp~q~~~~~iDTGS~~~wv~~~~c~~~~~---------~~~~~~y~~~~S~t~~~~~-------------- 57 (317)
T PF00026_consen 1 QYYINVTIGTPPQTFRVLIDTGSSDTWVPSSNCNSCSS---------CASSGFYNPSKSSTFSNQG-------------- 57 (317)
T ss_dssp EEEEEEEETTTTEEEEEEEETTBSSEEEEBTTECSHTH---------HCTSC-BBGGGSTTEEEEE--------------
T ss_pred CeEEEEEECCCCeEEEEEEecccceeeeceeccccccc---------cccccccccccccccccce--------------
Confidence 4999999999999999999999999999987 766611 1124689999999999753
Q ss_pred CCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCC-------
Q 009271 188 LKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD------- 260 (538)
Q Consensus 188 ~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~------- 260 (538)
+.+.+.|++| + ++|.+++|+|+|++. ...++.||++....+........+||||||+..
T Consensus 58 ----~~~~~~y~~g-~-~~G~~~~D~v~ig~~--------~~~~~~f~~~~~~~~~~~~~~~~~GilGLg~~~~~~~~~~ 123 (317)
T PF00026_consen 58 ----KPFSISYGDG-S-VSGNLVSDTVSIGGL--------TIPNQTFGLADSYSGDPFSPIPFDGILGLGFPSLSSSSTY 123 (317)
T ss_dssp ----EEEEEEETTE-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEESHHHHHSSSSEEEE-SSGGGSGGGTS
T ss_pred ----eeeeeeccCc-c-cccccccceEeeeec--------cccccceeccccccccccccccccccccccCCcccccccC
Confidence 7799999986 4 999999999999875 356799999999766432223679999999643
Q ss_pred CChHHHHHhcCCCC-CceEEeecCCC--CccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECCe-EeecCC
Q 009271 261 VSVPSLLAKAGLIQ-NSFSICFDEND--SGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGNS-CLTQSG 332 (538)
Q Consensus 261 ~Sl~sqL~~~g~i~-~~FS~cl~~~~--~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg~-~l~~~~ 332 (538)
.+++.+|.++|+|. ++||++|.+.. .|.|+||++|+.++. ++|++ ...+|.|.+++|.++++ ......
T Consensus 124 ~~~~~~l~~~g~i~~~~fsl~l~~~~~~~g~l~~Gg~d~~~~~g~~~~~~~~----~~~~w~v~~~~i~i~~~~~~~~~~ 199 (317)
T PF00026_consen 124 PTFLDQLVQQGLISSNVFSLYLNPSDSQNGSLTFGGYDPSKYDGDLVWVPLV----SSGYWSVPLDSISIGGESVFSSSG 199 (317)
T ss_dssp -SHHHHHHHTTSSSSSEEEEEEESTTSSEEEEEESSEEGGGEESEEEEEEBS----STTTTEEEEEEEEETTEEEEEEEE
T ss_pred CcceecchhhccccccccceeeeecccccchheeeccccccccCceeccCcc----cccccccccccccccccccccccc
Confidence 57889999999997 99999999864 699999999988764 66765 34789999999999999 444455
Q ss_pred ceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEEee
Q 009271 333 FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPE 412 (538)
Q Consensus 333 ~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~~ 412 (538)
..++|||||++++||.+++++|.+++...... .+|..+|.....+|.|+|+| ++.++.+++++|++..
T Consensus 200 ~~~~~Dtgt~~i~lp~~~~~~i~~~l~~~~~~-----------~~~~~~c~~~~~~p~l~f~~-~~~~~~i~~~~~~~~~ 267 (317)
T PF00026_consen 200 QQAILDTGTSYIYLPRSIFDAIIKALGGSYSD-----------GVYSVPCNSTDSLPDLTFTF-GGVTFTIPPSDYIFKI 267 (317)
T ss_dssp EEEEEETTBSSEEEEHHHHHHHHHHHTTEEEC-----------SEEEEETTGGGGSEEEEEEE-TTEEEEEEHHHHEEEE
T ss_pred eeeecccccccccccchhhHHHHhhhcccccc-----------eeEEEecccccccceEEEee-CCEEEEecchHhcccc
Confidence 78999999999999999999999887654332 36677777667899999999 6799999999999988
Q ss_pred cCCcceEE-EEEEe----cCCCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 413 NEGFTVFC-LTVMS----TDGDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 413 ~~~~~~~C-l~i~~----~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
.......| ++|.. ...+.+|||.+|||++|+|||.|++|||||++
T Consensus 268 ~~~~~~~C~~~i~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~ig~A~a 317 (317)
T PF00026_consen 268 EDGNGGYCYLGIQPMDSSDDSDDWILGSPFLRNYYVVFDYENNRIGFAQA 317 (317)
T ss_dssp SSTTSSEEEESEEEESSTTSSSEEEEEHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cccccceeEeeeecccccccCCceEecHHHhhceEEEEeCCCCEEEEecC
Confidence 76544589 67777 23458999999999999999999999999985
|
; InterPro: IPR001461 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Aspartic endopeptidases 3.4.23. from EC of vertebrate, fungal and retroviral origin have been characterised []. More recently, aspartic endopeptidases associated with the processing of bacterial type 4 prepilin [] and archaean preflagellin have been described [, ]. Structurally, aspartic endopeptidases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localised between the two lobes of the molecule. One lobe has probably evolved from the other through a gene duplication event in the distant past. In modern-day enzymes, although the three-dimensional structures are very similar, the amino acid sequences are more divergent, except for the catalytic site motif, which is very conserved. The presence and position of disulphide bridges are other conserved features of aspartic peptidases. All or most aspartate peptidases are endopeptidases. These enzymes have been assigned into clans (proteins which are evolutionary related), and further sub-divided into families, largely on the basis of their tertiary structure. This group of aspartic peptidases belong to MEROPS peptidase family A1 (pepsin family, clan AA). The type example is pepsin A from Homo sapiens (Human) . More than 70 aspartic peptidases, from all from eukaryotic organisms, have been identified. These include pepsins, cathepsins, and renins. The enzymes are synthesised with signal peptides, and the proenzymes are secreted or passed into the lysosomal/endosomal system, where acidification leads to autocatalytic activation. Most members of the pepsin family specifically cleave bonds in peptides that are at least six residues in length, with hydrophobic residues in both the P1 and P1' positions []. Crystallography has shown the active site to form a groove across the junction of the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors within the active site []. Specificity is determined by several hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. Cysteine residues are well conserved within the pepsin family, pepsin itself containing three disulphide loops. The first loop is found in all but the fungal enzymes, and is usually around five residues in length, but is longer in barrierpepsin and candidapepsin; the second loop is also small and found only in the animal enzymes; and the third loop is the largest, found in all members of the family, except for the cysteine-free polyporopepsin. The loops are spread unequally throughout the two lobes, suggesting that they formed after the initial gene duplication and fusion event []. This family does not include the retroviral nor retrotransposon aspartic proteases which are much smaller and appear to be homologous to the single domain aspartic proteases.; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis; PDB: 1CZI_E 3CMS_A 1CMS_A 4CMS_A 1YG9_A 2NR6_A 3LIZ_A 1FLH_A 3UTL_A 1QRP_E .... |
| >cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=356.74 Aligned_cols=265 Identities=29% Similarity=0.520 Sum_probs=221.1
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCC
Q 009271 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSL 188 (538)
Q Consensus 110 yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C~~~ 188 (538)
|+++|.||||+|++.|++||||+++||+|. |..|..+... ...|++..|+++..
T Consensus 1 Y~~~i~iGtp~q~~~l~~DTGS~~~wv~~~~c~~~~~~~~~--------~~~~~~~~s~~~~~----------------- 55 (283)
T cd05471 1 YYGEITIGTPPQKFSVIFDTGSSLLWVPSSNCTSCSCQKHP--------RFKYDSSKSSTYKD----------------- 55 (283)
T ss_pred CEEEEEECCCCcEEEEEEeCCCCCEEEecCCCCccccccCC--------CCccCccCCceeec-----------------
Confidence 789999999999999999999999999998 8877654310 11367777776653
Q ss_pred CCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCC------CC
Q 009271 189 KDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD------VS 262 (538)
Q Consensus 189 ~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~------~S 262 (538)
..|.|.+.|++| ++.|.+++|+|+|++.. .+++.|||++...+.+.. ...+||||||+.. .+
T Consensus 56 -~~~~~~~~Y~~g--~~~g~~~~D~v~~~~~~--------~~~~~fg~~~~~~~~~~~-~~~~GilGLg~~~~~~~~~~s 123 (283)
T cd05471 56 -TGCTFSITYGDG--SVTGGLGTDTVTIGGLT--------IPNQTFGCATSESGDFSS-SGFDGILGLGFPSLSVDGVPS 123 (283)
T ss_pred -CCCEEEEEECCC--eEEEEEEEeEEEECCEE--------EeceEEEEEeccCCcccc-cccceEeecCCcccccccCCC
Confidence 359999999985 58899999999998752 678999999998764332 3679999999998 79
Q ss_pred hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCC----ceeeeeeecCCCCceEEEeEeEEEECCe--EeecC
Q 009271 263 VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPAT----QQSTSFLPIGEKYDAYFVGVESYCIGNS--CLTQS 331 (538)
Q Consensus 263 l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~----~~~tplv~~~~~~~~y~V~l~~i~Vgg~--~l~~~ 331 (538)
+++||.++++|. ++||+||.+. ..|.|+||+.++.+ ..++|++.. ...+|.|.+++|.|+++ .....
T Consensus 124 ~~~~l~~~~~i~~~~Fs~~l~~~~~~~~~g~l~~Gg~d~~~~~~~~~~~p~~~~--~~~~~~v~l~~i~v~~~~~~~~~~ 201 (283)
T cd05471 124 FFDQLKSQGLISSPVFSFYLGRDGDGGNGGELTFGGIDPSKYTGDLTYTPVVSN--GPGYWQVPLDGISVGGKSVISSSG 201 (283)
T ss_pred HHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEEcccCccccCCceEEEecCCC--CCCEEEEEeCeEEECCceeeecCC
Confidence 999999999986 9999999873 68999999999864 458998764 24799999999999997 34445
Q ss_pred CceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEEe
Q 009271 332 GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFP 411 (538)
Q Consensus 332 ~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~ 411 (538)
...+||||||++++||+++|++|.+++.+.... ...|+...|.....+|.|+|+|
T Consensus 202 ~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~p~i~f~f---------------- 256 (283)
T cd05471 202 GGGAIVDSGTSLIYLPSSVYDAILKALGAAVSS---------SDGGYGVDCSPCDTLPDITFTF---------------- 256 (283)
T ss_pred CcEEEEecCCCCEeCCHHHHHHHHHHhCCcccc---------cCCcEEEeCcccCcCCCEEEEE----------------
Confidence 678999999999999999999999888765543 2346666666667899999999
Q ss_pred ecCCcceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 412 ENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 412 ~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
.+|||+.||+++|++||.++++|||++
T Consensus 257 ------------------~~ilG~~fl~~~y~vfD~~~~~igfa~ 283 (283)
T cd05471 257 ------------------LWILGDVFLRNYYTVFDLDNNRIGFAP 283 (283)
T ss_pred ------------------EEEccHhhhhheEEEEeCCCCEEeecC
Confidence 589999999999999999999999985
|
Pepsin-like aspartic proteases are found in mammals, plants, fungi and bacteria. These well known and extensively characterized enzymes include pepsins, chymosin, renin, cathepsins, and fungal aspartic proteases. Several have long been known to be medically (renin, cathepsin D and E, pepsin) or commercially (chymosin) important. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Aspartate residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. Most members of the pepsin family specifically cleave bonds in peptides that are at least six residues in length, with hydrophobic residu |
| >PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-32 Score=252.44 Aligned_cols=157 Identities=39% Similarity=0.762 Sum_probs=128.8
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC----CC
Q 009271 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS----SC 185 (538)
Q Consensus 110 yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~----~C 185 (538)
||++|.||||+|++.|+|||||+++|++| ..+.|+|++|+||+.++|++++|.... .|
T Consensus 1 Y~~~~~iGtP~~~~~lvvDtgs~l~W~~C------------------~~~~f~~~~Sst~~~v~C~s~~C~~~~~~~~~~ 62 (164)
T PF14543_consen 1 YYVSVSIGTPPQPFSLVVDTGSDLTWVQC------------------PDPPFDPSKSSTYRPVPCSSPQCSSAPSFCPCC 62 (164)
T ss_dssp EEEEEECTCTTEEEEEEEETT-SSEEEET----------------------STT-TTSSBEC-BTTSHHHHHCTSSBTCC
T ss_pred CEEEEEeCCCCceEEEEEECCCCceEEcC------------------CCcccCCccCCcccccCCCCcchhhcccccccC
Confidence 89999999999999999999999999997 137999999999999999999998542 45
Q ss_pred CCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCChHH
Q 009271 186 KSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS 265 (538)
Q Consensus 186 ~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~Sl~s 265 (538)
...+..|.|.+.|+++ +++.|.+++|+|+++...... ....++.|||++.+.|.+. ..+||||||++++||++
T Consensus 63 ~~~~~~C~y~~~y~~~-s~~~G~l~~D~~~~~~~~~~~---~~~~~~~FGC~~~~~g~~~---~~~GilGLg~~~~Sl~s 135 (164)
T PF14543_consen 63 CCSNNSCPYSQSYGDG-SSSSGFLASDTLTFGSSSGGS---NSVPDFIFGCATSNSGLFY---GADGILGLGRGPLSLPS 135 (164)
T ss_dssp TCESSEEEEEEEETTT-EEEEEEEEEEEEEEEEESSSS---EEEEEEEEEEE-GGGTSST---TEEEEEE-SSSTTSHHH
T ss_pred CCCcCcccceeecCCC-ccccCceEEEEEEecCCCCCC---ceeeeEEEEeeeccccCCc---CCCcccccCCCcccHHH
Confidence 5556789999999994 899999999999999864332 3457999999999998775 67999999999999999
Q ss_pred HHHhcCCCCCceEEeecC---CCCccEEeCC
Q 009271 266 LLAKAGLIQNSFSICFDE---NDSGSVFFGD 293 (538)
Q Consensus 266 qL~~~g~i~~~FS~cl~~---~~~G~l~fG~ 293 (538)
||+++ ..++|||||.+ +..|.|+||+
T Consensus 136 Ql~~~--~~~~FSyCL~~~~~~~~g~l~fG~ 164 (164)
T PF14543_consen 136 QLASS--SGNKFSYCLPSSSPSSSGFLSFGD 164 (164)
T ss_dssp HHHHH----SEEEEEB-S-SSSSEEEEEECS
T ss_pred HHHHh--cCCeEEEECCCCCCCCCEEEEeCc
Confidence 99988 66999999988 4679999996
|
|
| >PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=206.87 Aligned_cols=142 Identities=24% Similarity=0.483 Sum_probs=115.6
Q ss_pred eEEEeEeEEEECCeEeecC---------CceEEEcCCCccccccHHHHHHHHHHHHHhhccccc---ccccccccccccc
Q 009271 313 AYFVGVESYCIGNSCLTQS---------GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRI---SLQGNSWKYCYNA 380 (538)
Q Consensus 313 ~y~V~l~~i~Vgg~~l~~~---------~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~---~~~~~~~~~Cy~~ 380 (538)
+|+|+|++|+||++++... ..++||||||++|+||+++|++|+++|.+++..... ......++.||+.
T Consensus 1 ~Y~v~l~~Isvg~~~l~~~~~~~~~~~~~g~~iiDSGT~~T~L~~~~y~~l~~al~~~~~~~~~~~~~~~~~~~~~Cy~~ 80 (161)
T PF14541_consen 1 FYYVNLTGISVGGKRLPIPPSVFQLSDGSGGTIIDSGTTYTYLPPPVYDALVQALDAQMGAPGVSREAPPFSGFDLCYNL 80 (161)
T ss_dssp SEEEEEEEEEETTEEE---TTCSCETTSTCSEEE-SSSSSEEEEHHHHHHHHHHHHHHHHTCT--CEE---TT-S-EEEG
T ss_pred CccEEEEEEEECCEEecCChHHhhccCCCCCEEEECCCCccCCcHHHHHHHHHHHHHHhhhcccccccccCCCCCceeec
Confidence 5999999999999998732 246999999999999999999999999999987642 2233678899999
Q ss_pred cc----cccccCccEEEEEcCCeeeeeecceeEEeecCCcceEEEEEEec---CCCceeEcceeeeeeEEEEeCCCCEEE
Q 009271 381 SS----EEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMST---DGDYGIIGQNFMMGHRIVFDRENLKLA 453 (538)
Q Consensus 381 ~~----~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~~~~~~~Cl~i~~~---~~~~~IlG~~fl~~~yvVFD~e~~rIG 453 (538)
+. .....+|+|+|+|+||+.+++++++|++.... +.+||+|.++ ..+..|||..+|++++++||++++|||
T Consensus 81 ~~~~~~~~~~~~P~i~l~F~~ga~l~l~~~~y~~~~~~--~~~Cla~~~~~~~~~~~~viG~~~~~~~~v~fDl~~~~ig 158 (161)
T PF14541_consen 81 SSFGVNRDWAKFPTITLHFEGGADLTLPPENYFVQVSP--GVFCLAFVPSDADDDGVSVIGNFQQQNYHVVFDLENGRIG 158 (161)
T ss_dssp GCS-EETTEESS--EEEEETTSEEEEE-HHHHEEEECT--TEEEESEEEETSTTSSSEEE-HHHCCTEEEEEETTTTEEE
T ss_pred cccccccccccCCeEEEEEeCCcceeeeccceeeeccC--CCEEEEEEccCCCCCCcEEECHHHhcCcEEEEECCCCEEE
Confidence 87 35568999999999999999999999998874 6999999998 456899999999999999999999999
Q ss_pred Eee
Q 009271 454 WSH 456 (538)
Q Consensus 454 fa~ 456 (538)
|+|
T Consensus 159 F~~ 161 (161)
T PF14541_consen 159 FAP 161 (161)
T ss_dssp EEE
T ss_pred EeC
Confidence 986
|
|
| >cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=168.76 Aligned_cols=107 Identities=38% Similarity=0.595 Sum_probs=89.5
Q ss_pred EEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCC-CCCCCCCCccccCCCCCCCCCCCCCCCC
Q 009271 112 TWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEY-DPSSSSSSKNVSCSHPLCKSRSSCKSLK 189 (538)
Q Consensus 112 ~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f-~ps~SsT~~~~~C~~~~C~~~~~C~~~~ 189 (538)
++|.||||||++.|+|||||+++||+|. |..|.... .+.| +|++|+|++..
T Consensus 1 ~~i~vGtP~q~~~~~~DTGSs~~Wv~~~~c~~~~~~~----------~~~~~~~~~sst~~~~----------------- 53 (109)
T cd05470 1 IEIGIGTPPQTFNVLLDTGSSNLWVPSVDCQSLAIYS----------HSSYDDPSASSTYSDN----------------- 53 (109)
T ss_pred CEEEeCCCCceEEEEEeCCCCCEEEeCCCCCCccccc----------ccccCCcCCCCCCCCC-----------------
Confidence 3689999999999999999999999998 87775432 2345 99999998854
Q ss_pred CCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 190 DPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 190 ~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
.|.|.+.|++| ++.|.+++|+|+|++. ...++.|||++...+.+......+|||||
T Consensus 54 -~~~~~~~Y~~g--~~~g~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGL 109 (109)
T cd05470 54 -GCTFSITYGTG--SLSGGLSTDTVSIGDI--------EVVGQAFGCATDEPGATFLPALFDGILGL 109 (109)
T ss_pred -CcEEEEEeCCC--eEEEEEEEEEEEECCE--------EECCEEEEEEEecCCccccccccccccCC
Confidence 48999999986 4789999999999874 35789999999998875544477999998
|
This family includes both cellular and retroviral pepsin-like aspartate proteases. The cellular pepsin and pepsin-like enzymes are twice as long as their retroviral counterparts. The cellular pepsin-like aspartic proteases are found in mammals, plants, fungi and bacteria. These well known and extensively characterized enzymes include pepsins, chymosin, rennin, cathepsins, and fungal aspartic proteases. Several have long been known to be medically (rennin, cathepsin D and E, pepsin) or commercially (chymosin) important. The eukaryotic pepsin-like proteases contain two domains possessing similar topological features. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except in the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The eukaryotic pepsin-like proteases have two active site |
| >cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0015 Score=54.04 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=26.0
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeEecC
Q 009271 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (538)
Q Consensus 109 ~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~ 139 (538)
.||+++.|+ .+++.+++|||++.+|+...
T Consensus 2 ~~~v~v~i~--~~~~~~llDTGa~~s~i~~~ 30 (96)
T cd05483 2 HFVVPVTIN--GQPVRFLLDTGASTTVISEE 30 (96)
T ss_pred cEEEEEEEC--CEEEEEEEECCCCcEEcCHH
Confidence 478999999 69999999999999999764
|
This family of bacteria aspartate proteases is a subfamily of retropepsin-like protease family, which includes enzymes from retrovirus and retrotransposons. While fungal and mammalian pepsin-like aspartate proteases are bilobal proteins with structurally related N- and C-termini, this family of bacteria aspartate proteases is half as long as their fungal and mammalian counterparts. The monomers are structurally related to one lobe of the pepsin molecule and function as homodimers. The active site aspartate occurs within a motif (Asp-Thr/Ser-Gly), as it does in pepsin. In aspartate peptidases, Asp residues are ligands of an activated water molecule in all examples where catalytic residues have been identified. This group of aspartate proteases is classified by MEROPS as the peptidase family A2 (retropepsin family, clan AA), subfamily A2A. |
| >cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.33 Score=42.67 Aligned_cols=103 Identities=18% Similarity=0.179 Sum_probs=55.8
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhccc-ccccccccccccccccccccccCccEEEEEcCC
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSK-RISLQGNSWKYCYNASSEEMLKVPDMRLIFSKN 398 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~-~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg 398 (538)
.+.|+|..+. ++||||.+.+.++.+..+++--... .... .....+..-..+ ........+++ |+
T Consensus 20 ~~~Ing~~~~-----~LvDTGAs~s~Is~~~a~~lgl~~~--~~~~~~~~~~g~g~~~~-------~g~~~~~~l~i-~~ 84 (124)
T cd05479 20 NVEINGVPVK-----AFVDSGAQMTIMSKACAEKCGLMRL--IDKRFQGIAKGVGTQKI-------LGRIHLAQVKI-GN 84 (124)
T ss_pred EEEECCEEEE-----EEEeCCCceEEeCHHHHHHcCCccc--cCcceEEEEecCCCcEE-------EeEEEEEEEEE-CC
Confidence 4466777665 8999999999999988776531100 0000 000000000000 00112333444 33
Q ss_pred eeeeeecceeEEeecCCcceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEE
Q 009271 399 QSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLA 453 (538)
Q Consensus 399 ~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIG 453 (538)
..+.+ . +.+.+..+...|||.+||+.+..+.|..+++|-
T Consensus 85 ~~~~~--~--------------~~Vl~~~~~d~ILG~d~L~~~~~~ID~~~~~i~ 123 (124)
T cd05479 85 LFLPC--S--------------FTVLEDDDVDFLIGLDMLKRHQCVIDLKENVLR 123 (124)
T ss_pred EEeee--E--------------EEEECCCCcCEEecHHHHHhCCeEEECCCCEEE
Confidence 32221 1 223333233589999999999999999999875
|
The family represents the retropepsin-like domain of DNA damage inducible protein. DNA damage inducible protein has a retropepsin-like domain and an amino-terminal ubiquitin-like domain and/or a UBA (ubiquitin-associated) domain. This CD represents the retropepsin-like domain of DDI. |
| >TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.71 Score=40.43 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=27.3
Q ss_pred ceEEEeEeEEEECCeEeecCCceEEEcCCCccccccHHHHHHH
Q 009271 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEV 354 (538)
Q Consensus 312 ~~y~V~l~~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l 354 (538)
.+|.+ .+.|+|+.+. ++||||.+.+.++.+..+++
T Consensus 10 g~~~v---~~~InG~~~~-----flVDTGAs~t~is~~~A~~L 44 (121)
T TIGR02281 10 GHFYA---TGRVNGRNVR-----FLVDTGATSVALNEEDAQRL 44 (121)
T ss_pred CeEEE---EEEECCEEEE-----EEEECCCCcEEcCHHHHHHc
Confidence 45644 4577888655 89999999999999977665
|
This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix. Sequences in the seed alignment and those scoring above the trusted cutoff are Proteobacterial; homologs scroing between trusted and noise are found in Pyrobaculum aerophilum str. IM2 (archaeal), Pirellula sp. (Planctomycetes), and Nostoc sp. PCC 7120 (Cyanobacteria). |
| >cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein | Back alignment and domain information |
|---|
Probab=90.54 E-value=2.7 Score=36.88 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=25.9
Q ss_pred cEEEEEEEecCCCeEEEEEEEcCCCceeEecC
Q 009271 108 WLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (538)
Q Consensus 108 ~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~ 139 (538)
..+|+++.|+ ++++.+++|||++..++.-+
T Consensus 15 ~~~~v~~~In--g~~~~~LvDTGAs~s~Is~~ 44 (124)
T cd05479 15 PMLYINVEIN--GVPVKAFVDSGAQMTIMSKA 44 (124)
T ss_pred eEEEEEEEEC--CEEEEEEEeCCCceEEeCHH
Confidence 3578899998 68899999999999999765
|
The family represents the retropepsin-like domain of DNA damage inducible protein. DNA damage inducible protein has a retropepsin-like domain and an amino-terminal ubiquitin-like domain and/or a UBA (ubiquitin-associated) domain. This CD represents the retropepsin-like domain of DDI. |
| >PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) | Back alignment and domain information |
|---|
Probab=89.86 E-value=2.1 Score=38.33 Aligned_cols=28 Identities=18% Similarity=0.349 Sum_probs=25.5
Q ss_pred ceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 430 YGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 430 ~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
..|||...|+.|..+-|..+++|-|...
T Consensus 105 DvILGm~WL~~~~~~IDw~~k~v~f~~p 132 (135)
T PF08284_consen 105 DVILGMDWLKKHNPVIDWATKTVTFNSP 132 (135)
T ss_pred eeEeccchHHhCCCEEEccCCEEEEeCC
Confidence 5899999999999999999999999753
|
These proteases are generally part of a larger polyprotein; usually pol, more rarely gag. Retroviral proteases appear to be homologous to a single domain of the two-domain eukaryotic aspartyl proteases. |
| >PF13650 Asp_protease_2: Aspartyl protease | Back alignment and domain information |
|---|
Probab=89.36 E-value=3.7 Score=32.94 Aligned_cols=25 Identities=8% Similarity=0.193 Sum_probs=20.0
Q ss_pred EEEecCCCeEEEEEEEcCCCceeEecC
Q 009271 113 WIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (538)
Q Consensus 113 ~v~iGtP~q~~~v~lDTGS~~~Wv~c~ 139 (538)
++.|+ .+++.+++|||++.+.+.-+
T Consensus 2 ~v~vn--g~~~~~liDTGa~~~~i~~~ 26 (90)
T PF13650_consen 2 PVKVN--GKPVRFLIDTGASISVISRS 26 (90)
T ss_pred EEEEC--CEEEEEEEcCCCCcEEECHH
Confidence 45666 58999999999998888643
|
|
| >cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases | Back alignment and domain information |
|---|
Probab=88.48 E-value=0.54 Score=38.70 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=24.5
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeEecC
Q 009271 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (538)
Q Consensus 110 yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~ 139 (538)
||+++.|+ .+++.+.+||||+..++.-+
T Consensus 1 ~~~~~~In--g~~i~~lvDTGA~~svis~~ 28 (91)
T cd05484 1 KTVTLLVN--GKPLKFQLDTGSAITVISEK 28 (91)
T ss_pred CEEEEEEC--CEEEEEEEcCCcceEEeCHH
Confidence 57889998 68999999999999999753
|
Retropepsin of retrotransposons with long terminal repeats are pepsin-like aspartate proteases. While fungal and mammalian pepsins are bilobal proteins with structurally related N- and C-termini, retropepsins are half as long as their fungal and mammalian counterparts. The monomers are structurally related to one lobe of the pepsin molecule and retropepsins function as homodimers. The active site aspartate occurs within a motif (Asp-Thr/Ser-Gly), as it does in pepsin. Retroviral aspartyl protease is synthesized as part of the POL polyprotein that contains an aspartyl protease, a reverse transcriptase, RNase H, and an integrase. The POL polyprotein undergoes specific enzymatic cleavage to yield the mature proteins. In aspartate peptidases, Asp residues are ligands of an activated water molecule in all examples where catalytic residues have been identified. This group of aspartate peptidases is classif |
| >TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family | Back alignment and domain information |
|---|
Probab=88.15 E-value=1.8 Score=37.08 Aligned_cols=24 Identities=33% Similarity=0.512 Sum_probs=20.6
Q ss_pred CceeEcceeeeeeEEEEeCCCCEE
Q 009271 429 DYGIIGQNFMMGHRIVFDRENLKL 452 (538)
Q Consensus 429 ~~~IlG~~fl~~~yvVFD~e~~rI 452 (538)
+..+||..||+.+-++.|..++++
T Consensus 84 ~~~LLG~~~L~~l~l~id~~~~~~ 107 (107)
T TIGR03698 84 DEPLLGTELLEGLGIVIDYRNQGL 107 (107)
T ss_pred CccEecHHHHhhCCEEEehhhCcC
Confidence 368999999999999999887653
|
Members of this protein family are clan AA aspartic proteases, related to family TIGR02281. These proteins resemble retropepsins, pepsin-like proteases of retroviruses such as HIV. Members of this family are found in archaea and bacteria. |
| >PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=83.16 E-value=7.4 Score=35.76 Aligned_cols=21 Identities=29% Similarity=0.619 Sum_probs=17.4
Q ss_pred eEEEcCCCccccccHHHHHHH
Q 009271 334 QALVDSGASFTFLPTEIYAEV 354 (538)
Q Consensus 334 ~aiiDSGTs~t~LP~~~y~~l 354 (538)
.++||||....++-.++.+.|
T Consensus 47 ~vLfDSGSPTSfIr~di~~kL 67 (177)
T PF12384_consen 47 KVLFDSGSPTSFIRSDIVEKL 67 (177)
T ss_pred EEEEeCCCccceeehhhHHhh
Confidence 499999999988888776655
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Ty3 is a gypsy-type, retrovirus-like, element found in the budding yeast. The Ty3 aspartyl protease is required for processing of the viral polyprotein into its mature species []. |
| >TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family | Back alignment and domain information |
|---|
Probab=81.28 E-value=3.1 Score=36.40 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=28.5
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~ 139 (538)
...+..||+++.|. .+++.++||||++.+-++.+
T Consensus 6 ~~~~g~~~v~~~In--G~~~~flVDTGAs~t~is~~ 39 (121)
T TIGR02281 6 KDGDGHFYATGRVN--GRNVRFLVDTGATSVALNEE 39 (121)
T ss_pred EcCCCeEEEEEEEC--CEEEEEEEECCCCcEEcCHH
Confidence 45567899999997 57999999999999988753
|
This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix. Sequences in the seed alignment and those scoring above the trusted cutoff are Proteobacterial; homologs scroing between trusted and noise are found in Pyrobaculum aerophilum str. IM2 (archaeal), Pirellula sp. (Planctomycetes), and Nostoc sp. PCC 7120 (Cyanobacteria). |
| >PF13650 Asp_protease_2: Aspartyl protease | Back alignment and domain information |
|---|
Probab=81.23 E-value=2 Score=34.49 Aligned_cols=30 Identities=17% Similarity=0.337 Sum_probs=25.0
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHH
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEV 354 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l 354 (538)
.+.|+|+.+. ++||||.+.+.+.++.++++
T Consensus 2 ~v~vng~~~~-----~liDTGa~~~~i~~~~~~~l 31 (90)
T PF13650_consen 2 PVKVNGKPVR-----FLIDTGASISVISRSLAKKL 31 (90)
T ss_pred EEEECCEEEE-----EEEcCCCCcEEECHHHHHHc
Confidence 3577887665 89999999999999988776
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 | Back alignment and structure |
|---|
Score = 221 bits (564), Expect = 5e-67
Identities = 65/380 (17%), Positives = 117/380 (30%), Gaps = 43/380 (11%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSS 167
LH+ + TP + V +D N LWV C+ A + + S
Sbjct: 22 LHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFC----------HSTQCS 71
Query: 168 SSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ C SR C + C ++ + G L +D+L + + Q
Sbjct: 72 RANTHQCLSCPAASRPGCHK--NTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLG 129
Query: 228 VQSSV---IIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICF--D 282
+V + C GV GLG +S+P+ LA +Q F+ C
Sbjct: 130 PLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY 189
Query: 283 ENDSGSVFFGDQGPATQQSTSFL---------PIGEKYDAYFVGVESYCIGNSCL----- 328
G++ FGD +Q + Y V V S I +
Sbjct: 190 PTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNK 249
Query: 329 ------TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASS 382
+ ++ + L +Y F + + + + C+N++
Sbjct: 250 ISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309
Query: 383 EEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYG---IIGQNFMM 439
D+ + + + G V CL VM+ +G +
Sbjct: 310 INAYPSVDLVMDKPNGPVWRISGEDLMVQAQPG--VTCLGVMNGGMQPRAEITLGARQLE 367
Query: 440 GHRIVFDRENLKLAWSHSKC 459
+ +VFD ++ +S S
Sbjct: 368 ENLVVFDLARSRVGFSTSSL 387
|
| >1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 | Back alignment and structure |
|---|
Score = 196 bits (498), Expect = 9e-58
Identities = 63/378 (16%), Positives = 125/378 (33%), Gaps = 53/378 (14%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSS 167
L+ G + LD L+W C A + S T ++
Sbjct: 15 LYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPT----------CLLAN 59
Query: 168 SSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ C P C S K Y + + ++G L + P S
Sbjct: 60 AYPAPGCPAPSCGSDKHDKP---CTAYPYNPVS-GACAAGSLSHTRFVANTTDGSKPVSK 115
Query: 228 VQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSG 287
V V+ C + + L + GV GL +++P+ +A A + N F +C G
Sbjct: 116 VNVGVLAACAPSKLLASLPRGS-TGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPG 174
Query: 288 SVFFGDQGPATQQSTSFLP-----IGEKYDAYFVGVESYCIGNSCL-----TQSGFQALV 337
FG Q T +P A+++ S +G++ + + ++
Sbjct: 175 VAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVML 234
Query: 338 DSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNS--------WKYCYN----ASSEEM 385
+ + L ++Y ++ F K ++++ + + + CY+ ++
Sbjct: 235 STRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGG 294
Query: 386 LKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYG--------IIGQNF 437
VP+++L + + +G C+ + G I+G
Sbjct: 295 YAVPNVQLGLDGGSDWTMTGKNSMVDVKQG--TACVAFVEMKGVAAGDGRAPAVILGGAQ 352
Query: 438 MMGHRIVFDRENLKLAWS 455
M + FD E +L +S
Sbjct: 353 MEDFVLDFDMEKKRLGFS 370
|
| >3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 2e-55
Identities = 69/393 (17%), Positives = 129/393 (32%), Gaps = 55/393 (13%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSS 168
+ T I+ TP VS + +D G LWV C + S S
Sbjct: 21 QYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVR---------CRTSQCSL 71
Query: 169 SKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSV 228
S +++C R C + + C + +T++ G + +D++ + S + V
Sbjct: 72 SGSIACGDCFNGPRPGCNN--NTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVV 129
Query: 229 Q-SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICF--DEND 285
I C L G+ GLG +++PS A A + F++C +
Sbjct: 130 TVPRFIFSCAPTSLLQNLASGV-VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSS 188
Query: 286 SGSVFFGDQGPATQQSTSFLPIGEKY--------------------DAYFVGVESYCIGN 325
+ + FG+ + Y YF+GV+S I +
Sbjct: 189 NSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINS 248
Query: 326 SCLT----------QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISL--QGNS 373
+ + + +T L T IY V F K +++ I+
Sbjct: 249 KIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP 308
Query: 374 WKYCYNASS----EEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGD 429
+ C++ + VP + L+ S V CL V+ +
Sbjct: 309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-NVVCLGVVDGGSN 367
Query: 430 YG---IIGQNFMMGHRIVFDRENLKLAWSHSKC 459
+IG + + + + FD ++ +S +
Sbjct: 368 LRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLL 400
|
| >3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 72/359 (20%), Positives = 127/359 (35%), Gaps = 71/359 (19%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
I +G+ N V +D GS+ LWVP + C + + YDPS SS+S+
Sbjct: 15 AADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQ 74
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
+++ P+ Y +SS G L D + S +++
Sbjct: 75 DLNT------------------PFKIGYGD-GSSSQGTLYKDTVGFGGVS-------IKN 108
Query: 231 SVIIGCGRKQT-GSYLDGAAPDGVMGLGLGDVS-------VPSLLAKAGLI-QNSFSICF 281
Q + G++G+G VP L K G+I +N++S+
Sbjct: 109 ---------QVLADVDSTSIDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYL 159
Query: 282 DENDS--GSVFFGD------QGPATQQSTSFLPIGEKYDAYF-VGVESYCIGNSCLTQSG 332
+ D+ G + FG G LP+ + + S + +
Sbjct: 160 NSPDAATGQIIFGGVDNAKYSGSLI-----ALPVTSD--RELRISLGSVEVSGKTINTDN 212
Query: 333 FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392
L+DSG + T+L ++ + K + K + Y + + D+
Sbjct: 213 VDVLLDSGTTITYLQQDLAD----QIIKAFNGKLTQDSNGNSFYEVDCNL-----SGDVV 263
Query: 393 LIFSKNQSFVV--RNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 449
FSKN V S ++G ++ D I+G NF+ IV+D ++
Sbjct: 264 FNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVNDANILGDNFLRSAYIVYDLDD 322
|
| >2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 62/360 (17%), Positives = 123/360 (34%), Gaps = 73/360 (20%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
I +G+ N V +D GS+ LW+P + C P ++ Y P+SS +S+
Sbjct: 15 TADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQ 74
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
N++ + Y + + G L D + + S V+
Sbjct: 75 NLNT------------------RFDIKYGD-GSYAKGKLYKDTVGIGGVS-------VRD 108
Query: 231 SVIIGCGRKQT-GSYLDGAAPDGVMGLGLGDVS--------VPSLLAKAGLI-QNSFSIC 280
Q + +A G++G+G +P L G+I + ++S+
Sbjct: 109 ---------QLFANVWSTSARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLY 159
Query: 281 FDENDS--GSVFFG--D----QGPATQQSTSFLPIGEKYDAYF-VGVESYCIGNSCLTQS 331
+ ++ G + FG D G LPI + VG+ S + +
Sbjct: 160 LNSAEASTGQIIFGGIDKAKYSGSLV-----DLPITSE--KKLTVGLRSVNVRGR-NVDA 211
Query: 332 GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDM 391
L+DSG + ++ I ++ + ++ + Y + + +
Sbjct: 212 NTNVLLDSGTTISYFTRSIVRNIL----YAIGAQMKFDSAGNKVYVADCKT-----SGTI 262
Query: 392 RLIFSKNQSFVV--RNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 449
F N V +F G V + + I+G NF+ +V++ ++
Sbjct: 263 DFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRESEDNILGDNFLRSAYVVYNLDD 322
|
| >3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 | Back alignment and structure |
|---|
Score = 98.1 bits (244), Expect = 4e-22
Identities = 63/439 (14%), Positives = 129/439 (29%), Gaps = 93/439 (21%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
Q Y Y + +G+P + + +D GS+ V L Y
Sbjct: 71 KSGQGY---YVEMTVGSPPQTLNILVDTGSSNFAVGA--APHPFLH-----------RYY 114
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
SS+ +++ Y+ G L D++ +
Sbjct: 115 QRQLSSTYRDLRK------------------GVYVPYTQ--GKWEGELGTDLVSIPHGP- 153
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS--------LLAKAGLI 273
+V I + +++G+ +G++GL +++ P L K +
Sbjct: 154 -----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHV 208
Query: 274 QNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVG---------------- 317
N FS+ G+ F +Q + IG + + G
Sbjct: 209 PNLFSLQL----CGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVI 264
Query: 318 -----VESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVV--VKFDKLVSSKRISLQ 370
+ + C + +++VDSG + LP +++ V +K
Sbjct: 265 IVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFW 324
Query: 371 GNSWKYCYNASSEEMLKVPDMRLIF-----SKNQSFVV--RNHIFSFPENEGFTVFCLT- 422
C+ A + P + L +++ + + ++ + C
Sbjct: 325 LGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKF 384
Query: 423 VMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPL 482
+S ++G M G +VFDR ++ ++ S C P
Sbjct: 385 AISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH--------DEFRTAAVEGPF 436
Query: 483 PTTEQQSTSNGQAAAPPST 501
T + + ST
Sbjct: 437 VTLDMEDCGYNIPQTDEST 455
|
| >1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 4e-22
Identities = 72/385 (18%), Positives = 130/385 (33%), Gaps = 81/385 (21%)
Query: 94 SEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTS 153
S+ T Y I +G+ V +D GS+ LWV +C + +
Sbjct: 1 SDVPTTLINEGPSY---AADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNN 57
Query: 154 LDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDI 213
+ +DPSSSSS++N++ + +Y TSS G D
Sbjct: 58 FCKQEGTFDPSSSSSAQNLNQ------------------DFSIEYGD-LTSSQGSFYKDT 98
Query: 214 LHLASFSKHAPQSSVQSSVIIGCGRKQT-GSYLDGAAPDGVMGLGLGDVS--------VP 264
+ S +++ Q + G+MG+G VP
Sbjct: 99 VGFGGIS-------IKN---------QQFADVTTTSVDQGIMGIGFTADEAGYNLYDNVP 142
Query: 265 SLLAKAGLI-QNSFSICFDENDS--GSVFFG--D----QGPATQQSTSFLPIGEKYDAYF 315
L K G+I +N++S+ + D+ G + FG D G T LP+
Sbjct: 143 VTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLT-----ALPVTSS--VEL 195
Query: 316 -VGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSW 374
V + S + + ++DSG + T+ + + + +S
Sbjct: 196 RVHLGSINFDGT-SVSTNADVVLDSGTTITYFSQSTADKFA---------RIVGATWDSR 245
Query: 375 KYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFC-LTVMSTDGDYGII 433
Y S ++ D F + V +++ C + D I+
Sbjct: 246 NEIYRLPSCDLS--GDAVFNFDQGVKITVPLSELILKDSDSSI--CYFGISR--NDANIL 299
Query: 434 GQNFMMGHRIVFDRENLKLAWSHSK 458
G NF+ IV+D ++ ++ + K
Sbjct: 300 GDNFLRRAYIVYDLDDKTISLAQVK 324
|
| >2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 1e-21
Identities = 74/421 (17%), Positives = 136/421 (32%), Gaps = 81/421 (19%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
+ Y Y + IGTP + +D GS+ V + + + +
Sbjct: 10 DSGRGY---YLEMLIGTPPQKLQILVDTGSSNFAVAG--TPHSYID-----------TYF 53
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
D SS+ + Y+ S +G++ +D++ +
Sbjct: 54 DTERSSTYR------------------SKGFDVTVKYTQ--GSWTGFVGEDLVTIPKGF- 92
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS--------LLAKAGLI 273
+ V I + +L G +G++GL ++ PS L I
Sbjct: 93 -----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI 147
Query: 274 QNSFSICF---------DENDSGSVFFGDQGPAT-QQSTSFLPIGEKY----DAYFVGVE 319
N FS+ + GS+ G P+ + + PI E++ + + +
Sbjct: 148 PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIG 207
Query: 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVV--VKFDKLVSSKRISLQGNSWKYC 377
+ C + +A+VDSG + LP +++ VV V L+ S C
Sbjct: 208 GQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLAC 267
Query: 378 YNASSEEMLKVPDMRLIF-SKNQSFVVRNHIFSF-----PENEGFTVFCLTVM-STDGDY 430
+ S P + + +N S R I G C S +
Sbjct: 268 WTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNA 327
Query: 431 GIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQST 490
+IG M G ++FDR ++ ++ S C E + + P T + S
Sbjct: 328 LVIGATVMEGFYVIFDRAQKRVGFAASPCAE--------IAGAAVSEISGPFSTEDVASN 379
Query: 491 S 491
Sbjct: 380 C 380
|
| >3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 64/372 (17%), Positives = 117/372 (31%), Gaps = 76/372 (20%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
+ Y T + IGTP + D GS+ LWV
Sbjct: 12 SADSEY---ITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT------------GH 56
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
+ Y PS SS+SK VS + + Y +SSSG + D + +
Sbjct: 57 AIYTPSKSSTSKKVSGA-----------------SWSISYGD-GSSSSGDVYTDKVTIGG 98
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV----PSLL----AKA 270
F ++ + + + ++ G++GL + P A +
Sbjct: 99 F--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAAS 150
Query: 271 GLIQNSFSICFDENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIG 324
L + F+ +GS FG +GP + P+ + Y +G
Sbjct: 151 SLAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVA-----YTPVDNSQGFWEFTASGYSVG 205
Query: 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEE 384
L ++ + D+G + L + V + V S + Q + +
Sbjct: 206 GGKLNRNSIDGIADTGTTLLLLDDNV----VDAYYANVQSAQYDNQQEGVVFDCDED--- 258
Query: 385 MLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMGHR 442
+P + + + + + E + C + S+ I G +
Sbjct: 259 ---LPSFSFGVG-SSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGIGINIFGDVALKAAL 314
Query: 443 IVFDRENLKLAW 454
+VFD N +L W
Sbjct: 315 VVFDLGNERLGW 326
|
| >2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 1e-20
Identities = 63/412 (15%), Positives = 123/412 (29%), Gaps = 86/412 (20%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
Q Y Y + +G+P + + +D GS+ V L Y
Sbjct: 18 KSGQGY---YVEMTVGSPPQTLNILVDTGSSNFAVGA--APHPFLH-----------RYY 61
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
SS+ + Y+ G L D++ +
Sbjct: 62 QRQLSSTYR------------------DLRKGVYVPYTQ--GKWEGELGTDLVSIPHGP- 100
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS--------LLAKAGLI 273
+V I + +++G+ +G++GL +++ P L K +
Sbjct: 101 -----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHV 155
Query: 274 QNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVG---------------- 317
N FS+ G+ F +Q + IG + + G
Sbjct: 156 PNLFSLQL----CGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVI 211
Query: 318 -----VESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVV--VKFDKLVSSKRISLQ 370
+ + C + +++VDSG + LP +++ V +K
Sbjct: 212 IVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFW 271
Query: 371 GNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV-------RNHIFSFPENEGFTVFCLT- 422
C+ A + P + L + + ++ + C
Sbjct: 272 LGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKF 331
Query: 423 VMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPP 474
+S ++G M G +VFDR ++ ++ S C V D+ V P
Sbjct: 332 AISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSAC-HVHDEFRTAAVEGP 382
|
| >3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 6e-20
Identities = 76/401 (18%), Positives = 141/401 (35%), Gaps = 76/401 (18%)
Query: 65 LLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFL 124
L + K K + ++ N ++ I IGTP F
Sbjct: 21 KLKDFLKTHKHNPASKYFPEAAAL--------IGDEPLENYLDTEYFGTIGIGTPAQDFT 72
Query: 125 VALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKS 181
V D GS+ LWVP C + C+ + ++++P SS+ +
Sbjct: 73 VIFDTGSSNLWVPSVYCSSLACS------------DHNQFNPDDSSTFE----------- 109
Query: 182 RSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQT 241
Y T S +G L D + + ++ I G +
Sbjct: 110 -------ATSQELSITYGT--GSMTGILGYDTVQVGGI--------SDTNQIFGLSETEP 152
Query: 242 GSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLI-QNSFSICF--DENDSGSVFFG 292
GS+L A DG++GL +S L GL+ Q+ FS+ +++ V G
Sbjct: 153 GSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLG 212
Query: 293 DQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGN-SCLTQSGFQALVDSGASFTFLPTEI 350
+ S +++P+ + + + ++S + + G QA+VD+G S PT
Sbjct: 213 GIDSSYYTGSLNWVPVSVEGY-WQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPT-- 269
Query: 351 YAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410
+ + + S G C + S +PD+ + + +
Sbjct: 270 --SAIANIQSDIGASENS-DGEMVISCSSIDS-----LPDIVFTID-GVQYPLSPSAYIL 320
Query: 411 PENEG--FTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 449
+++ + V ++ G+ I+G F+ + VFDR N
Sbjct: 321 QDDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRAN 361
|
| >1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 8e-20
Identities = 59/355 (16%), Positives = 115/355 (32%), Gaps = 68/355 (19%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
T + IGTP + + D GS+ LWV + T+ + + Y PS S+++K
Sbjct: 18 ITPVQIGTPAQTLNLDFDTGSSDLWVFS--SET--------TASEVXQTIYTPSKSTTAK 67
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
+S + + Y +SSSG + D + + +
Sbjct: 68 LLSGA-----------------TWSISYGD-GSSSSGDVYTDTVSVGGL--------TVT 101
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLG------LGDVSVPSLLAKA-GLI-QNSFSICFD 282
+ +K + S+ + + DG++GL + + A + F+
Sbjct: 102 GQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTADLG 161
Query: 283 ENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQAL 336
+ G+ FG G T + + K + Y +G+ + +
Sbjct: 162 YHAPGTYNFGFIDTTAYTGSIT-----YTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGI 216
Query: 337 VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFS 396
D+G + +LP + V + VS + S Y + S+ +P
Sbjct: 217 ADTGTTLLYLPATV----VSAYWAQVSGAKSSSSVGG--YVFPCSA----TLPSFTFGVG 266
Query: 397 KNQSFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMGHRIVFDREN 449
+ V+ F + C + S I G + +VF+
Sbjct: 267 -SARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGAT 320
|
| >1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 3e-19
Identities = 63/369 (17%), Positives = 119/369 (32%), Gaps = 83/369 (22%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
N + Y ++G + F++ D GS LWVP C C+
Sbjct: 59 VANIMF---YGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCS------------IK 103
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
+ YD S S S + KD Y + + G+ D++ L
Sbjct: 104 NLYDSSKSKSYE------------------KDGTKVDITYGS--GTVKGFFSKDLVTLGH 143
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGL 272
S + I DG++GLG D+S+ S+ L
Sbjct: 144 LS-------MPYKFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNK 196
Query: 273 I-QNSFSICF--DENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCI 323
I F+ + +G + G +G T + + + + ++ +
Sbjct: 197 IDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNIT-----YEKLNHDLY-WQIDLDVH-F 249
Query: 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSE 383
G + +VDSG + P+ E + KF ++ ++ + +
Sbjct: 250 GKQTM--EKANVIVDSGTTTITAPS----EFLNKFFANLNVIKVP-FLPFYVTTCDNKE- 301
Query: 384 EMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTV---MSTDGDYGIIGQNFMMG 440
+P + + N ++ + + P E C+ + D + I+G FM
Sbjct: 302 ----MPTLEFKSA-NNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRK 356
Query: 441 HRIVFDREN 449
+ VFD +
Sbjct: 357 YFTVFDYDK 365
|
| >2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 4e-19
Identities = 73/405 (18%), Positives = 143/405 (35%), Gaps = 80/405 (19%)
Query: 71 KRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAG 130
K + + S + L + + N +Y I IGTP +F V D G
Sbjct: 24 KERGVDMARLGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTG 83
Query: 131 SNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKD 190
S+ +WVP +C+ L + +D S SSS K +
Sbjct: 84 SSNVWVPS--SKCSRLYTA-----CVYHKLFDASDSSSYK------------------HN 118
Query: 191 PCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAP 250
YST + SG+L DI+ + + Q + G + A
Sbjct: 119 GTELTLRYST--GTVSGFLSQDIITVGGIT--VTQ-------MFGEVTEMPALPFMLAEF 167
Query: 251 DGVMGLGLGDVSVPSL------LAKAGLI-QNSFSICFDENDS------GSVFFGD---- 293
DGV+G+G + ++ + + G++ ++ FS ++ + G + G
Sbjct: 168 DGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQ 227
Query: 294 --QGPATQQSTSFLPIGEKYDAYFVGVESYCIGN-SCLTQSGFQALVDSGASFTFLPTEI 350
+G ++ + + + + ++ +G+ + L + G ALVD+GAS+ T
Sbjct: 228 HYEGNFH-----YINLIKTGV-WQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSS 281
Query: 351 YAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410
+++ + + + + Y + L PD+ + + + + + F
Sbjct: 282 IEKLM---------EALGAKKRLFDYVVKCNEGPTL--PDISFHLG-GKEYTLTSADYVF 329
Query: 411 PENEGFTVFCLT-VMSTDGDYG-----IIGQNFMMGHRIVFDREN 449
E+ C + + D +G F+ FDR N
Sbjct: 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRN 374
|
| >2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 5e-19
Identities = 73/422 (17%), Positives = 134/422 (31%), Gaps = 96/422 (22%)
Query: 62 LELLLSNDWKRQKTRVKLQSNNNSSRNQL-LFPSEGSQTHFFG------------NQFYW 108
+ + N R +K N + + S ++T++ G N +
Sbjct: 82 IGFKVENAHDRILKTIKTHKLKNYIKESVNFLNSGLTKTNYLGSSNDNIELVDFQNIMF- 140
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSS 165
Y ++G F LD GS LWVP C C YD S
Sbjct: 141 --YGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCL------------TKHLYDSSK 186
Query: 166 SSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQ 225
S + + KD +Y + + SG+ D++ + + S
Sbjct: 187 SRTYE------------------KDGTKVEMNYVS--GTVSGFFSKDLVTVGNLS----- 221
Query: 226 SSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLI-QNSFS 278
+ I + DG++GLG D+S+ S+ L I F+
Sbjct: 222 --LPYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFT 279
Query: 279 ICF--DENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330
+ +G + G +GP T + + + + ++++ +GN L
Sbjct: 280 FYLPVHDKHTGFLTIGGIEERFYEGPLT-----YEKLNHDLY-WQITLDAH-VGNIML-- 330
Query: 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPD 390
+VDSG S +PT+ K + + ++ + N S +P
Sbjct: 331 EKANCIVDSGTSAITVPTDFLN----KMLQNLDVIKVP-FLPFYVTLCNNSK-----LPT 380
Query: 391 MRLIFSKNQSFVVRNHIFSFPENEGFTVFCL---TVMSTDGDYGIIGQNFMMGHRIVFDR 447
N + + + + C+ + I+G FM + VFD
Sbjct: 381 FEFTSE-NGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDY 439
Query: 448 EN 449
+N
Sbjct: 440 DN 441
|
| >3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 8e-19
Identities = 79/464 (17%), Positives = 153/464 (32%), Gaps = 86/464 (18%)
Query: 9 MLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSN 68
+LF + + + S+ F K I K+ S + + ++ + +
Sbjct: 40 ILFVTVFIVLAGGFSYYIFENFVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEH 99
Query: 69 DWK-RQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVAL 127
K K VKL + + ++ L + + N + +G F
Sbjct: 100 KLKNYIKESVKLFNKGLTKKSYLGSEFDNVELKDLANVLS---FGEAKLGDNGQKFNFLF 156
Query: 128 DAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184
S+ +WVP C C + + YD S S + +
Sbjct: 157 HTASSNVWVPSIKCTSESCE------------SKNHYDSSKSKTYE-------------- 190
Query: 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSY 244
KD P + SG D++ + S P ++ + I+G +
Sbjct: 191 ----KDDTPVKLTSKA--GTISGIFSKDLVTIGKLS--VPYKFIEMTEIVG-----FEPF 237
Query: 245 LDGAAPDGVMGLGLGDVSVPSL------LAKAGLI-QNSFSICF--DENDSGSVFFGD-- 293
+ DGV GLG D+S+ S+ L I Q +SI + + G + G
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIE 297
Query: 294 ----QGPATQQSTSFLPIGEKYDAYF-VGVESYCIGNSCLTQSGFQALVDSGASFTFLPT 348
GP + + + V ++ + GN ++DS S +PT
Sbjct: 298 ERFFDGPLN-----YEKLNHD--LMWQVDLDVH-FGNVS--SKKANVILDSATSVITVPT 347
Query: 349 EIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIF 408
E + + V + S+ + Y + K+P + N+ + + +
Sbjct: 348 EFFNQFV---------ESASVFKVPFLSLYVTTC-GNTKLPTLEYRSP-NKVYTLEPKQY 396
Query: 409 SFPENEGFTVFCLTV---MSTDGDYGIIGQNFMMGHRIVFDREN 449
P F+ C+ + + + ++G FM + V+D +N
Sbjct: 397 LEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDN 440
|
| >1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 1e-18
Identities = 75/371 (20%), Positives = 126/371 (33%), Gaps = 83/371 (22%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
+ N Y YT I +GTP +F V LD GS+ LWVP C + C
Sbjct: 10 YLNAQY---YTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACF------------LH 54
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
S+YD +SSS K + + Y T S GY+ D L +
Sbjct: 55 SKYDHEASSSYK------------------ANGTEFAIQYGT--GSLEGYISQDTLSIGD 94
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGL 272
+ G DG++GLG +SV + + L
Sbjct: 95 L--------TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDL 146
Query: 273 I-QNSFSICF-----DENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVES 320
+ + F+ D + G FG +G T +LP+ K + V E
Sbjct: 147 LDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDIT-----WLPVRRKAY-WEVKFEG 200
Query: 321 YCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380
+G+ A +D+G S LP+ + + + +K+ G C
Sbjct: 201 IGLGDEYAELESHGAAIDTGTSLITLPS----GLAEMINAEIGAKKGW-TGQYTLDCNTR 255
Query: 381 SSEEMLKVPDMRLIFSKNQSFVV--RNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFM 438
+ +PD+ F+ +F + ++ + + + G I+G F+
Sbjct: 256 DN-----LPDLIFNFN-GYNFTIGPYDYTLEVSGSCISAITPMDFPEPVGPLAIVGDAFL 309
Query: 439 MGHRIVFDREN 449
+ ++D N
Sbjct: 310 RKYYSIYDLGN 320
|
| >1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 65/368 (17%), Positives = 115/368 (31%), Gaps = 81/368 (22%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
+ Y Y I IGTP SF V D GS+ LWV C C+ N
Sbjct: 9 EADTEY---YGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACS------------NH 53
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
+++ P SS+ + Y T G L D + +
Sbjct: 54 NKFKPRQSSTYV------------------ETGKTVDLTYGT--GGMRGILGQDTVSVGG 93
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGL 272
+ +G + + G + A DG++GL ++ + L
Sbjct: 94 G--------SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSL 145
Query: 273 I-QNSFSICF--DENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCI 323
+ ++ FS + V G G ++P+ + + V ++ +
Sbjct: 146 VEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIH-----WIPVTAEKY-WQVALDGITV 199
Query: 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSE 383
G QA+VD+G S P + K + + QG C + S
Sbjct: 200 NGQTAACEGCQAIVDTGTSKIVAPV----SALANIMKDIGASEN--QGEMMGNCASVQS- 252
Query: 384 EMLKVPDMRLIFSKNQSFVVRNHIFSFPENEG--FTVFCLTVMSTDGDYGIIGQNFMMGH 441
+PD+ + + + + + V S + I G F+ +
Sbjct: 253 ----LPDITFTIN-GVKQPLPPSAYIEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNY 307
Query: 442 RIVFDREN 449
++DR N
Sbjct: 308 YTIYDRTN 315
|
| >1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-18
Identities = 68/370 (18%), Positives = 128/370 (34%), Gaps = 78/370 (21%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
+ + Y + I IG+P +F V D GS+ LWVP C C +
Sbjct: 20 YLDMEY---FGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC------------KTH 64
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
S + PS SS+ + + Y T S SG + D + +
Sbjct: 65 SRFQPSQSSTYS------------------QPGQSFSIQYGT--GSLSGIIGADQVSVEG 104
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGL 272
G + G A DG++GLG ++V + + L
Sbjct: 105 L--------TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNL 156
Query: 273 I-QNSFSICF----DENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGN- 325
+ FS+ + + FG + S +++P+ ++ + + +++ +G
Sbjct: 157 VDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAY-WQIALDNIQVGGT 215
Query: 326 SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEM 385
G QA+VD+G S P+ + + + + + + G C N +
Sbjct: 216 VMFCSEGCQAIVDTGTSLITGPS----DKIKQLQNAIGAA--PVDGEYAVECANLNV--- 266
Query: 386 LKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLT------VMSTDGDYGIIGQNFMM 439
+PD+ + + + ++ + FC + + G I+G F+
Sbjct: 267 --MPDVTFTIN-GVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIR 323
Query: 440 GHRIVFDREN 449
VFDR N
Sbjct: 324 QFYSVFDRGN 333
|
| >3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 3e-18
Identities = 70/375 (18%), Positives = 135/375 (36%), Gaps = 85/375 (22%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
+ + Y Y I IGTP +F V D GS+ +WVP +C+ L + +
Sbjct: 15 YMDTQY---YGEIGIGTPPQTFKVVFDTGSSNVWVPS--SKCSRLYTA-----CVYHKLF 64
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
D S SSS K + YST + SG+L DI+ + +
Sbjct: 65 DASDSSSYK------------------HNGTELTLRYST--GTVSGFLSQDIITVGGIT- 103
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLI-Q 274
Q + G + A DGV+G+G + ++ + + G++ +
Sbjct: 104 -VTQ-------MFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKE 155
Query: 275 NSFSICFDENDS------GSVFFGD------QGPATQQSTSFLPIGEKYDAYF-VGVESY 321
+ FS ++ + G + G +G ++ + + + + ++
Sbjct: 156 DVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFH-----YINLIKT--GVWQIQMKGV 208
Query: 322 CIGN-SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380
+G+ + L + G ALVD+GAS+ T +++ + + + + Y
Sbjct: 209 SVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLM---------EALGAKKRLFDYVVKC 259
Query: 381 SSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLT------VMSTDGDYGIIG 434
+ L PD+ + + + + + F E+ C + G +G
Sbjct: 260 NEGPTL--PDISFHLG-GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALG 316
Query: 435 QNFMMGHRIVFDREN 449
F+ FDR N
Sbjct: 317 ATFIRKFYTEFDRRN 331
|
| >1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 3e-18
Identities = 60/359 (16%), Positives = 115/359 (32%), Gaps = 79/359 (22%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSSSS 167
T + +G + D GS LWV + Y PSSS+
Sbjct: 17 LTPVTVGKST--LHLDFDTGSADLWVFSDELPSSEQT------------GHDLYTPSSSA 62
Query: 168 SSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ + + Y +S+SG + D + + +
Sbjct: 63 TKLSGY-------------------SWDISYGD-GSSASGDVYRDTVTVGGVT------- 95
Query: 228 VQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL--------LAKAGLIQNSFSI 279
+ + K + ++ A DG++GL ++ K+ L F++
Sbjct: 96 -TNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQLDSPLFAV 154
Query: 280 CFDENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333
+ G FG G T + + + Y IG+ + SGF
Sbjct: 155 QLKHDAPGVYDFGYIDDSKYTGSIT-----YTDADSSQGYWGFSTDGYSIGDGSSSSSGF 209
Query: 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKY-CYNASSEEMLKVPDMR 392
A+ D+G + L EI V + + VS + S + + + C +PD
Sbjct: 210 SAIADTGTTLILLDDEI----VSAYYEQVSGAQESYEAGGYVFSCST-------DLPDFT 258
Query: 393 LIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMGHRIVFDREN 449
++ + VV ++ + C + ++ I+G F+ +VF+ E
Sbjct: 259 VVIG-DYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEG 316
|
| >1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 7e-18
Identities = 54/363 (14%), Positives = 117/363 (32%), Gaps = 71/363 (19%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
F N Y IG N FL D+ S + V +C + NL +Y
Sbjct: 14 FINTQY---AGITKIGNQN--FLTVFDSTSCNVVVAS--QECVGGACVCP-----NLQKY 61
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
+ + + + + T S+ G ++D L ++ +
Sbjct: 62 EKLKPKYISDGN-------------------VQVKFFDT--GSAVGRGIEDSLTISQLT- 99
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG-------LGDVSVPSLLAKAGLIQ 274
I+ + + + D V+G+ L +V + LI
Sbjct: 100 ------TSQQDIVLA--DELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLIA 151
Query: 275 NSFSICF----DENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYF-VGVESYCIGNSCL 328
FSI D G + FG +++P+ + ++ IG++ +
Sbjct: 152 PVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD--DSWKFRLDGVKIGDTTV 209
Query: 329 TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKV 388
+G QA++D+ + P + + + ++ + + ++ +
Sbjct: 210 APAGTQAIIDTSKAIIVGPKAYV-------NPINEAIGCVVEKTTTRRICKLDCSKIPSL 262
Query: 389 PDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMGHRIVFD 446
PD+ + + ++F + + + C + D+ IG F+ + F+
Sbjct: 263 PDVTFVIN-GRNFNISSQYYIQQNGN----LCYSGFQPCGHSDHFFIGDFFVDHYYSEFN 317
Query: 447 REN 449
EN
Sbjct: 318 WEN 320
|
| >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 75/369 (20%), Positives = 130/369 (35%), Gaps = 78/369 (21%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
+ + Y + I IGTP +FLV D GS+ LWVP CQ C +
Sbjct: 9 YMDAAY---FGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACT------------SH 53
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
S ++PS SS+ + + Y + S +G+ D L + S
Sbjct: 54 SRFNPSESSTYS------------------TNGQTFSLQYGS--GSLTGFFGYDTLTVQS 93
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGL 272
+ G + G+ A DG+MGL +SV + + G
Sbjct: 94 I--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGA 145
Query: 273 I-QNSFSICFDENDS---GSVFFGDQGPAT-QQSTSFLPIGEKYDAYF-VGVESYCIGNS 326
+ FS+ G+V FG + + P+ ++ Y+ +G+E + IG
Sbjct: 146 LTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE--LYWQIGIEEFLIGGQ 203
Query: 327 --CLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEE 384
G QA+VD+G S +P + + + ++ G C + +
Sbjct: 204 ASGWCSEGCQAIVDTGTSLLTVPQ----QYMSALLQATGAQEDE-YGQFLVNCNSIQN-- 256
Query: 385 MLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYG----IIGQNFMMG 440
+P + I + F + + N G+ + G I+G F+
Sbjct: 257 ---LPSLTFIIN-GVEFPLPPSSYIL-SNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRS 311
Query: 441 HRIVFDREN 449
+ V+D N
Sbjct: 312 YYSVYDLGN 320
|
| >1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 57/359 (15%), Positives = 111/359 (30%), Gaps = 82/359 (22%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNLSEYDPSSSS 167
T + IG + D GS LWV Q + S Y+PS++
Sbjct: 18 ITPVTIGGTT--LNLNFDTGSADLWVFSTELPASQQS------------GHSVYNPSATG 63
Query: 168 SSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ + Y +S+SG + D + +
Sbjct: 64 KELSGY-------------------TWSISYGD-GSSASGNVFTDSVTVGGV-------- 95
Query: 228 VQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL--------LAKAGLIQNSFSI 279
+ ++ + + DG++GL ++ K+ L Q F++
Sbjct: 96 TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAV 155
Query: 280 CFDENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333
G FG G T + + + V+SY G+ GF
Sbjct: 156 ALKHQQPGVYDFGFIDSSKYTGSLT-----YTGVDNSQGFWSFNVDSYTAGSQSG--DGF 208
Query: 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKY-CYNASSEEMLKVPDMR 392
+ D+G + L + V ++ VS + + + C +PD
Sbjct: 209 SGIADTGTTLLLLDDSV----VSQYYSQVSGAQQDSNAGGYVFDCST-------NLPDFS 257
Query: 393 LIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMGHRIVFDREN 449
+ S + V + ++ + + CL + ++ + I G F+ +VFD +
Sbjct: 258 VSIS-GYTATVPGSLINYGPSGDGS-TCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDG 314
|
| >3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 3e-17
Identities = 70/369 (18%), Positives = 125/369 (33%), Gaps = 86/369 (23%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVP---CQCIQCAPLSASYYTSLDRNL 158
+ + Y + I +GTP F V D GS+ WVP C+ C N
Sbjct: 11 YLDSQY---FGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK------------NH 55
Query: 159 SEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218
+DP SS+ + P Y T S G L D + +++
Sbjct: 56 QRFDPRKSSTFQ------------------NLGKPLSIHYGT--GSMQGILGYDTVTVSN 95
Query: 219 FSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGL 272
V +G ++ G + A DG++G+ ++ + L
Sbjct: 96 I--------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHL 147
Query: 273 I-QNSFSICFDENDSGSVF-FGD------QGPATQQSTSFLPIGEKYDAYF-VGVESYCI 323
+ Q+ FS+ D N S+ G G ++P+ + Y+ V+S I
Sbjct: 148 VAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLH-----WVPVTVQ--QYWQFTVDSVTI 200
Query: 324 GN-SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASS 382
+ G QA++D+G S P+ + + + + G C N S
Sbjct: 201 SGVVVACEGGCQAILDTGTSKLVGPSSDIL----NIQQAIGATQNQ-YGEFDIDCDNLSY 255
Query: 383 EEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM--STDGDYGIIGQNFMMG 440
+P + + + + + ++ + FC + I+G F+
Sbjct: 256 -----MPTVVFEIN-GKMYPLTPSAYTSQDQG----FCTSGFQSENHSQKWILGDVFIRE 305
Query: 441 HRIVFDREN 449
+ VFDR N
Sbjct: 306 YYSVFDRAN 314
|
| >3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 3e-17
Identities = 62/375 (16%), Positives = 122/375 (32%), Gaps = 94/375 (25%)
Query: 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDP 163
Y + + +G+ V +D GS+ WV QC + + P
Sbjct: 11 GPSY---ASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK------SSGTFTP 61
Query: 164 SSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHA 223
SSSSS KN+ + Y ++S G D + + S
Sbjct: 62 SSSSSYKNLGA------------------AFTIRYGD-GSTSQGTWGKDTVTINGVS--- 99
Query: 224 PQSSVQSSVIIGCGRKQT-GSYLDGAAPDGVMGLGL------GDVSV----------PSL 266
+ Q + G++G+G D S P
Sbjct: 100 ----ITG---------QQIADVTQTSVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVT 146
Query: 267 LAKAGLI-QNSFSICFDENDS--GSVFFG--D----QGPATQQSTSFLPIGEKYDAYF-V 316
L K G I N++S+ + + G++ FG D G + +
Sbjct: 147 LKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLV-----AEQVTSS--QALTI 199
Query: 317 GVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKY 376
+ S + S G AL+DSG + T+ P++ A++ ++ + + + + Y
Sbjct: 200 SLASVNLKGS-SFSFGDGALLDSGTTLTYFPSDFAAQLA----DKAGARLVQVARDQYLY 254
Query: 377 CYNASSEEMLKVPDMRLIFS--KNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIG 434
+ + +F+ V N + + +G ++ + D I+G
Sbjct: 255 FIDCN-----TDTSGTTVFNFGNGAKITVPNTEYVYQNGDGTCLWGIQPS----DDTILG 305
Query: 435 QNFMMGHRIVFDREN 449
NF+ ++++ +
Sbjct: 306 DNFLRHAYLLYNLDA 320
|
| >1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 4e-17
Identities = 67/390 (17%), Positives = 106/390 (27%), Gaps = 100/390 (25%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
F + Y + IGTP F + D GS+ WVP C +
Sbjct: 15 FDLEEY---AIPVSIGTPGQDFYLLFDTGSSDTWVPH--KGCDNSEGCV------GKRFF 63
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTE--DTSSSGYLVDDILHLASF 219
DPSSSS+ K + + ++G D + +
Sbjct: 64 DPSSSSTFKETD----------------------YNLNITYGTGGANGIYFRDSITVGGA 101
Query: 220 SKHAPQSSVQSSVIIGCGRKQTGSYLDGAAP-----DGVMGLGLGDVSVPSL-------- 266
+ +G + + DG+ G D +
Sbjct: 102 --------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNT 153
Query: 267 ----LAKAGLI-QNSFSICFDENDSGSVF-FGD------QGPATQQSTSFLPIGEKYDAY 314
L K GLI FS+ + ND G FG G + + + Y
Sbjct: 154 VHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQ-----YTDVLKSRGGY 208
Query: 315 F---VGVESYCIGNS--CLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISL 369
F V I S +D+G +F P+ +VV K
Sbjct: 209 FFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVV---------KAALP 259
Query: 370 QGNSWKYCYNASSEEMLKVPDMRLIFS---KNQSFVVRNHIFSFPENEGFTVFCLT---- 422
+ Y K D + FS + S P ++ +
Sbjct: 260 DATESQQGYTVPCS---KYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETC 316
Query: 423 ---VMSTDGDYGIIGQNFMMGHRIVFDREN 449
V+ G+ I+G F+ V+D
Sbjct: 317 MFIVLPDGGNQFIVGNLFLRFFVNVYDFGK 346
|
| >1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 61/354 (17%), Positives = 106/354 (29%), Gaps = 72/354 (20%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
T + +G + D GS LWV Q YY P SS+
Sbjct: 18 ITQVTVGDDT--LGLDFDTGSADLWVFSSQTPSSERSGHDYY----------TPGSSAQK 65
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
+ + + Y +S+SG + D + +
Sbjct: 66 IDGA-------------------TWSISYGD-GSSASGDVYKDKVTVGGV--------SY 97
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV----PSL----LAKAGLIQNSFSICF 281
S + K + + A DG++GL ++ P K+ L + F++
Sbjct: 98 DSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPIFAVAL 157
Query: 282 DENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQA 335
N G FG G T + + + + Y IG+ +
Sbjct: 158 KHNAPGVYDFGYTDSSKYTGSIT-----YTDVDNSQGFWGFTADGYSIGSD-SSSDSITG 211
Query: 336 LVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIF 395
+ D+G + L I V + + V+ S + Y S L PD +
Sbjct: 212 IADTGTTLLLLDDSI----VDAYYEQVNGASYD----SSQGGYVFPSSASL--PDFSVTI 261
Query: 396 SKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 449
+ + V SF + F ++ + I G F+ +VFD
Sbjct: 262 G-DYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASG 314
|
| >1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 1e-15
Identities = 62/268 (23%), Positives = 93/268 (34%), Gaps = 60/268 (22%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
+ Y + I IGTP F V D GS++LWVP +C A S Y
Sbjct: 10 DRDTSY---FGEIGIGTPPQKFTVIFDTGSSVLWVPS--SKCINSKACR------AHSMY 58
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
+ S SS+ K I Y T S +G+ D + +
Sbjct: 59 ESSDSST----------------YKENGTFG-AII-YGT--GSITGFFSQDSVTIGDLVV 98
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL--LAKAGLI-QNSFS 278
+ + DG++GL +SVP + GL+ + FS
Sbjct: 99 --------KEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVKERRFS 150
Query: 279 ICF----DENDSGSVFFGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNS-- 326
DE + G + FG +G T ++P+ +Y + G+ IG+
Sbjct: 151 FWLNRNVDEEEGGELVFGGLDPNHFRGDHT-----YVPVTYQYY-WQFGIGDVLIGDKST 204
Query: 327 CLTQSGFQALVDSGASFTFLPTEIYAEV 354
G QA DSG S PT I ++
Sbjct: 205 GFCAPGCQAFADSGTSLLSGPTAIVTQI 232
|
| >1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 7e-15
Identities = 67/380 (17%), Positives = 117/380 (30%), Gaps = 111/380 (29%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
+ +G+P ++ + +D GS+ W+ ++ +S+S
Sbjct: 15 VVNVGVGSPATTYSLLVDTGSSNTWLG---------------------ADKSYVKTSTSS 53
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTE--DTSSSGYLVDDILHLASFSKHAPQSSV 228
S S S SG D + L S
Sbjct: 54 ATS----------------------DKVSVTYGSGSFSGTEYTDTVTLGSL--------T 83
Query: 229 QSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSL--------------LAKAGLI- 273
IG + +G DG++G+G D++V +L L G I
Sbjct: 84 IPKQSIGVASRDSGF----DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIP 139
Query: 274 QNSFSICFDENDS-----GSVFFGD------QGPATQQSTSFLPI--GEKYDAYFVGVES 320
N ++ F+ S G + FG G T + PI AY+ +S
Sbjct: 140 TNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSIT-----YTPITSTSPASAYWGINQS 194
Query: 321 YCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380
G+S S +VD+G + T + ++ +A K+ K + + G
Sbjct: 195 IRYGSSTSILSSTAGIVDTGTTLTLIASDAFA----KYKKATGAVADNNTGLLRLTTAQY 250
Query: 381 SSEEMLKVPDMRLIFSKNQSFVV--RNHIFSFPENEGFTVFCLTVMSTDGDYG------- 431
++ + + Q+F + I+ N +V GD G
Sbjct: 251 AN-----LQSLFFTIG-GQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGL 304
Query: 432 --IIGQNFMMGHRIVFDREN 449
I G F+ V+D N
Sbjct: 305 DFINGLTFLERFYSVYDTTN 324
|
| >2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 4e-14
Identities = 71/357 (19%), Positives = 127/357 (35%), Gaps = 77/357 (21%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
Y + IGTP F + D GS+ LW+ C T+ ++YDP+ SS+ +
Sbjct: 18 YGQVTIGTPGKKFNLDFDTGSSDLWIAS--TLC--------TNCGSGQTKYDPNQSSTYQ 67
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
+ I+ Y +S+SG L D ++L +
Sbjct: 68 ---------ADGRTWS--------IS-YGD-GSSASGILAKDNVNLGGL--------LIK 100
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGL-------GDVSVPSLLAKAGLI-QNSFSICF- 281
I +++ S+ G DG++GLG G + L GLI + F +
Sbjct: 101 GQTIELAKREAASFASGPN-DGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLG 159
Query: 282 -DENDSGSVF-FGD------QGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333
+N G + FG +G T +PI + + V+ +G S S F
Sbjct: 160 KAKNGGGGEYIFGGYDSTKFKGSLT-----TVPIDNSRGWWGITVDRATVGTS-TVASSF 213
Query: 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRL 393
++D+G + LP + + + ++ + S+ +
Sbjct: 214 DGILDTGTTLLILPN----NIAASVARAYGASD--NGDGTYTISCDTSA-----FKPLVF 262
Query: 394 IFSKNQSFVVRNHIFSFPENEGFTVFCLT-VMSTDGDYGIIGQNFMMGHRIVFDREN 449
+ SF V F E +G C+ + + IIG F+ + +VF++
Sbjct: 263 SIN-GASFQVSPDSLVFEEFQG---QCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGV 315
|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 4e-14
Identities = 68/304 (22%), Positives = 104/304 (34%), Gaps = 62/304 (20%)
Query: 65 LLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFL 124
L + + + + L +Q +FG I +GTP F
Sbjct: 20 LSGGEEQPLLSGANPLRSEEEGDIVALKNYMNAQ--YFGE---------IGVGTPPQKFT 68
Query: 125 VALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184
V D GS+ LWVP +C A Y S Y +SS+ K
Sbjct: 69 VIFDTGSSNLWVPS--AKCYFSIACY------LHSRYKAGASSTYK-------------- 106
Query: 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSY 244
K+ P Y T S +GY +D + + V K+ G
Sbjct: 107 ----KNGKPAAIQYGT--GSIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGIT 152
Query: 245 LDGAAPDGVMGLGLGDVSVPS------LLAKAGLI-QNSFSICF----DENDSGSVFFGD 293
A DG++GLG ++SV + + GL+ FS DE + G + FG
Sbjct: 153 FLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGG 212
Query: 294 QGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNS--CLTQSGFQALVDSGASFTFLPTEI 350
P +++P+ +K + + +G G A+ DSG S PT I
Sbjct: 213 MDPKHYVGEHTYVPVTQKGY-WQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAI 271
Query: 351 YAEV 354
E+
Sbjct: 272 ITEI 275
|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 15/182 (8%)
Query: 274 QNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333
G T T + G + V+S + + +
Sbjct: 297 GQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACE 356
Query: 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRL 393
A+V T+ ++ ++L + S G S C + S +PD+
Sbjct: 357 MAVVWMQNQLAQNKTQ--DLILDYVNQLCNRLP-SPMGESAVDCGSLGS-----MPDIEF 408
Query: 394 IFSKNQSFVVRNHIFSFPENEGFTVFCLT------VMSTDGDYGIIGQNFMMGHRIVFDR 447
+ F ++ + EG C++ + G I+G FM + VFD
Sbjct: 409 TIG-GKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDY 467
Query: 448 EN 449
Sbjct: 468 GK 469
|
| >1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 4e-10
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 239 KQTGSYLDGAAPDGVMGLGLGDVSVPSL------LAKAGLI-QNSFSICF----DENDSG 287
KQ G A DG++G+ +SV ++ L + L+ QN FS D G
Sbjct: 15 KQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGG 74
Query: 288 SVFFGDQGPATQQ-STSFLPIGEKYDAYF-VGVESYCIGN-SCLTQSGFQALVDSGASFT 344
+ G + S S+L + K AY+ V ++ + + L + G +A+VD+G S
Sbjct: 75 ELMLGGTDSKYYKGSLSYLNVTRK--AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLM 132
Query: 345 FLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404
P + + K + + + QG C S+ +P + L + + +
Sbjct: 133 VGPVDEVR----ELQKAIGAVPLI-QGEYMIPCEKVST-----LPAITLKLG-GKGYKLS 181
Query: 405 NHIFSFPENEGFTVFCLT------VMSTDGDYGIIGQNFMMGHRIVFDREN 449
++ ++ CL+ + G I+G F+ + VFDR+N
Sbjct: 182 PEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDN 232
|
| >1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-06
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
+ + Y Y I IGTP F V D GS+ LWVP I C L + +Y
Sbjct: 10 YMDAQY---YGEIGIGTPPQCFTVVFDTGSSNLWVP--SIHCKLLDIA-----CWIHHKY 59
Query: 162 DPSSSSSSKN 171
+ SS+
Sbjct: 60 NSDKSSTYVK 69
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 6e-06
Identities = 64/529 (12%), Positives = 138/529 (26%), Gaps = 182/529 (34%)
Query: 10 LFGCILLDGSDAVSFSSKLVHRFSDEAKER---WISKSGNVSVADSWPKKNSVEYLELL- 65
LF +L ++V +F +E ++ + P + Y+E
Sbjct: 67 LFWTLLSKQE-------EMVQKFVEEVLRINYKFLMSP--IKTEQRQPSMMTRMYIEQRD 117
Query: 66 -LSND----WKRQKTRVKLQSNNNSSRNQL--LFPSEGSQTH------------------ 100
L ND K +R++ R L L P++
Sbjct: 118 RLYNDNQVFAKYNVSRLQPY---LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 101 ----FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDR 156
+ + W+++ N V L+ L + ++ + D
Sbjct: 175 KVQCKMDFKIF-----WLNLKNCNSPETV-LEMLQKL---------LYQIDPNWTSRSDH 219
Query: 157 NLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLV-DDI-- 213
+ + S ++ L KS+ L LV ++
Sbjct: 220 SSNIKLRIHSIQAELRR----LLKSKPYENCL--------------------LVLLNVQN 255
Query: 214 -LHLASFSKHAPQSSVQSSVIIGCGRKQTGSYL----DGAAPDGVMGLGLGDVSVPSLLA 268
+F+ + C + L D + +S+
Sbjct: 256 AKAWNAFN-------------LSC---KI---LLTTRFKQVTDFLSAATTTHISL----- 291
Query: 269 KAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLP-------------IGEKYDAYF 315
+ S+ ++ S+ LP I E
Sbjct: 292 ------DHHSMTLTPDEVKSLL----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341
Query: 316 VGVESYCIGNSCLTQSGFQALVDS-GASFTFL-PTEI---YAEVVVKF--DKLVSSKRIS 368
+++ L +S L P E + + V F + + +S
Sbjct: 342 ATWDNW-------KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSAHIPTILLS 393
Query: 369 LQGNSWKYCYNASSEEML-KVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTD 427
L W + ++ K+ L+ + + + +++ + +
Sbjct: 394 LI---WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP----------SIYLELKVKLE 440
Query: 428 GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC-EEVIDK---SHV--HL 470
+Y + HR + D N+ + +D+ SH+ HL
Sbjct: 441 NEYAL--------HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| 3vla_A | 413 | EDGP; extracellular, inhibitor, plant protein; HET | 100.0 | |
| 1mpp_A | 361 | Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu | 100.0 | |
| 3aup_A | 403 | SBG7S, BG, basic 7S globulin; pepsin-like fold, pl | 100.0 | |
| 1tzs_A | 351 | Cathepsin E; hydrolase, aspartic protease, activat | 100.0 | |
| 2x0b_A | 383 | Renin; hydrolase-hormone complex, hydrolase hormon | 100.0 | |
| 1dpj_A | 329 | Proteinase A; proteinase A, hydrolase-hydrolase in | 100.0 | |
| 3psg_A | 370 | Pepsinogen; hydrolase(acid proteinase zymogen); 1. | 100.0 | |
| 1am5_A | 324 | Pepsin, acid proteinase; aspartyl protease, hydrol | 100.0 | |
| 1j71_A | 334 | Candidapepsin, aspartic proteinase; candida tropic | 100.0 | |
| 2qzx_A | 342 | Candidapepsin-5; aspartic proteinase, aspartyl pro | 100.0 | |
| 2apr_A | 325 | Rhizopuspepsin; hydrolase (aspartic proteinase); 1 | 100.0 | |
| 3cms_A | 323 | Chymosin B; hydrolase, acid proteinase; 2.00A {Bos | 100.0 | |
| 1t6e_X | 381 | Xylanase inhibitor; two beta-barrel domain structu | 100.0 | |
| 2ewy_A | 383 | Beta-secretase 2; BACE2, aspartic protease, hydrol | 100.0 | |
| 4aa9_A | 320 | Chymosin; hydrolase, aspartic peptidase, rennet; H | 100.0 | |
| 2bju_A | 453 | Plasmepsin II; aspartic proteinase, drug design, m | 100.0 | |
| 3k1w_A | 341 | Renin; protease, alternative splicing, aspartyl pr | 100.0 | |
| 3c9x_A | 329 | Trichoderma reesei aspartic protease; aspartic pro | 100.0 | |
| 1htr_B | 329 | Gastricsin; aspartyl protease; 1.62A {Homo sapiens | 100.0 | |
| 2qp8_A | 395 | Beta-secretase 1; BACE1, protease, alternative spl | 100.0 | |
| 1oew_A | 329 | Endothiapepsin; hydrolase, aspartic proteinase mec | 100.0 | |
| 3fv3_A | 339 | SAPP1P-secreted aspartic protease 1; secreted aspa | 100.0 | |
| 3vf3_A | 402 | Beta-secretase 1; structure-based drug design, hyd | 100.0 | |
| 3lpj_A | 455 | Beta-secretase 1; alzheimer'S, aspartyl protease, | 100.0 | |
| 1miq_A | 375 | Plasmepsin; aspartic proteinase zymogen, domain op | 100.0 | |
| 3pvk_A | 342 | Candidapepsin-2; hydrolase; 1.27A {Candida albican | 100.0 | |
| 1qdm_A | 478 | Prophytepsin; aspartic proteinases, saposin-like d | 100.0 | |
| 3qvc_A | 451 | Histo-aspartic protease; HAP, plasmepsin, zymogen, | 100.0 | |
| 1yg9_A | 330 | Aspartic protease BLA G 2; allegren, hydrolase, al | 100.0 | |
| 1wkr_A | 340 | Polyporopepsin; hydrolase, hydrolase-hydrolase inh | 100.0 | |
| 1ibq_A | 325 | Aspergillopepsin; aspartic proteinase, hydrolase; | 100.0 | |
| 1izd_A | 323 | Aspartic proteinase; sugar binding, acid protease, | 100.0 | |
| 1bxo_A | 323 | Protein (penicillopepsin); hydrolase, phosphonate | 100.0 | |
| 1b5f_A | 239 | Protein (cardosin A); hydrolase, aspartic proteina | 100.0 | |
| 1lya_B | 241 | Cathepsin D; lysosomal aspartic protease; HET: NAG | 100.0 | |
| 1lya_A | 97 | Cathepsin D; lysosomal aspartic protease; HET: NAG | 99.86 | |
| 1b5f_B | 87 | Protein (cardosin A); hydrolase, aspartic proteina | 99.59 | |
| 3s8i_A | 148 | Protein DDI1 homolog 1; protease, structural genom | 92.85 | |
| 2i1a_A | 148 | DNA damage-inducible protein DDI1; acid protease f | 92.62 |
| >3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=495.70 Aligned_cols=326 Identities=21% Similarity=0.347 Sum_probs=263.0
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
+..+.+||++|.||||||+|.|+|||||+++||||. .| .+|+||+.++|.++.|....
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c--------------------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN--------------------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS--------------------CCCTTCEECBTTSHHHHHTT
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC--------------------CCCCCcCccCCCcccccccc
Confidence 345678999999999999999999999999999986 23 25999999999999997531
Q ss_pred --CC---CC------CCCCCceeEecC-CCCceEEEEEEEEEEEeccCCCCCCC-ccccccEEEEEEEeec--CCCCCCC
Q 009271 184 --SC---KS------LKDPCPYIADYS-TEDTSSSGYLVDDILHLASFSKHAPQ-SSVQSSVIIGCGRKQT--GSYLDGA 248 (538)
Q Consensus 184 --~C---~~------~~~~c~y~~~Y~-dg~ss~~G~l~~D~v~l~~~~~~~~~-~~~~~~~~fGc~~~~~--g~~~~~~ 248 (538)
.| .+ .++.|.|.+.|+ |+ +++.|+|++|+|+|+..++...+ ...++++.|||++.+. |.+ .
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~---~ 149 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA---S 149 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC---T
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc---c
Confidence 23 21 134699999994 74 78899999999999854321100 1245789999999873 332 3
Q ss_pred CCceEEeeCCCCCChHHHHHhcCCCCCceEEeecC--CCCccEEeCCCCCC---------C-ceeeeeeecCCC------
Q 009271 249 APDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPA---------T-QQSTSFLPIGEK------ 310 (538)
Q Consensus 249 ~~dGIlGLG~~~~Sl~sqL~~~g~i~~~FS~cl~~--~~~G~l~fG~~d~~---------~-~~~tplv~~~~~------ 310 (538)
.+|||||||++++|+++||+++++++++|||||.+ +..|.|+||+.+.. . ..|||++.....
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 67999999999999999999999889999999987 35799999998752 3 779999876422
Q ss_pred ----CceEEEeEeEEEECCeEeecC----------CceEEEcCCCccccccHHHHHHHHHHHHHhhccccc--ccccccc
Q 009271 311 ----YDAYFVGVESYCIGNSCLTQS----------GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRI--SLQGNSW 374 (538)
Q Consensus 311 ----~~~y~V~l~~i~Vgg~~l~~~----------~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~--~~~~~~~ 374 (538)
..+|+|+|++|+||++.+... ..++||||||++|+||+++|++|.++|.+++...+. ......+
T Consensus 230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~ 309 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPF 309 (413)
T ss_dssp TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTC
T ss_pred ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCC
Confidence 269999999999999998642 357999999999999999999999999988752111 1122456
Q ss_pred cccccccccc----cccCccEEEEEcC-CeeeeeecceeEEeecCCcceEEEEEEecCC---CceeEcceeeeeeEEEEe
Q 009271 375 KYCYNASSEE----MLKVPDMRLIFSK-NQSFVVRNHIFSFPENEGFTVFCLTVMSTDG---DYGIIGQNFMMGHRIVFD 446 (538)
Q Consensus 375 ~~Cy~~~~~~----~~~~P~it~~f~g-g~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~IlG~~fl~~~yvVFD 446 (538)
+.||+.++.. ...+|+|+|+|+| +..|.|++++|++...+ +.+|++|+..+. +.||||+.||++||+|||
T Consensus 310 ~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD 387 (413)
T 3vla_A 310 GACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFD 387 (413)
T ss_dssp SCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEEE
T ss_pred cceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEEE
Confidence 8899987532 2479999999976 48899999999987653 579999987642 589999999999999999
Q ss_pred CCCCEEEEeec
Q 009271 447 RENLKLAWSHS 457 (538)
Q Consensus 447 ~e~~rIGfa~~ 457 (538)
++++|||||++
T Consensus 388 ~~~~riGfa~~ 398 (413)
T 3vla_A 388 LATSRVGFSGT 398 (413)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999995
|
| >1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-55 Score=457.71 Aligned_cols=313 Identities=23% Similarity=0.277 Sum_probs=259.0
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC---CCCCCccccccccCCCCCCCCCCCCCCCccccCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI---QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 175 (538)
+++.|+.+..|+++|.||||+|+|.|+|||||+++||+|. |. .|.. ++.|+|++|+|++...
T Consensus 10 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~~-- 75 (361)
T 1mpp_A 10 PGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG------------KRFFDPSSSSTFKETD-- 75 (361)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS------------SCCBCGGGCTTCEEEE--
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC------------CCcCCCccCCceEecC--
Confidence 5677788899999999999999999999999999999998 87 6753 3689999999999764
Q ss_pred CCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecC-----CCCCCCCC
Q 009271 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG-----SYLDGAAP 250 (538)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g-----~~~~~~~~ 250 (538)
|.|.+.|++| + +.|.+++|+|+|++. .+.++.|||++.+.+ .+......
T Consensus 76 ----------------~~~~i~Yg~G-s-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~~~~~ 129 (361)
T 1mpp_A 76 ----------------YNLNITYGTG-G-ANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSELFL 129 (361)
T ss_dssp ----------------EEEEEECSSC-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSSCC
T ss_pred ----------------CeEEEEECCc-e-EEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccccCCC
Confidence 8999999996 4 799999999999864 368899999999887 44333467
Q ss_pred ceEEeeCCCCCC------------hHHHHHhcCCCC-CceEEeecCC-CCccEEeCCCCCCCc----eeeeeeecCCCCc
Q 009271 251 DGVMGLGLGDVS------------VPSLLAKAGLIQ-NSFSICFDEN-DSGSVFFGDQGPATQ----QSTSFLPIGEKYD 312 (538)
Q Consensus 251 dGIlGLG~~~~S------------l~sqL~~~g~i~-~~FS~cl~~~-~~G~l~fG~~d~~~~----~~tplv~~~~~~~ 312 (538)
+||||||+..++ ++.+|+++|+|. ++||+||.++ ..|.|+||++|+.++ .|+|++.......
T Consensus 130 ~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~ 209 (361)
T 1mpp_A 130 DGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYF 209 (361)
T ss_dssp CEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEE
T ss_pred CCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCcee
Confidence 999999997554 566899999996 9999999985 579999999998754 5999987543333
Q ss_pred eEEEeEeEEEECCeEee-cCCceEE-EcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccC-c
Q 009271 313 AYFVGVESYCIGNSCLT-QSGFQAL-VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKV-P 389 (538)
Q Consensus 313 ~y~V~l~~i~Vgg~~l~-~~~~~ai-iDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~-P 389 (538)
+|.|.|++|.|+++.+. .....+| |||||++++||+++|++|.+++.+.... ..+.....|+. ...+ |
T Consensus 210 ~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~----~~g~~~~~C~~-----~~~~~p 280 (361)
T 1mpp_A 210 FWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE----SQQGYTVPCSK-----YQDSKT 280 (361)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE----ETTEEEEEHHH-----HTTCCC
T ss_pred EEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC----CCCcEEEECCC-----cccCCC
Confidence 89999999999998874 3456799 9999999999999999999888654321 11112234554 3466 9
Q ss_pred cEEEEEc-C-----CeeeeeecceeEEeecCCcceEEE-EEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 390 DMRLIFS-K-----NQSFVVRNHIFSFPENEGFTVFCL-TVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 390 ~it~~f~-g-----g~~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
.|+|+|. | |.++.|++++|++....+ ...|+ +|++..++.||||+.|||++|+|||++++|||||+++|...
T Consensus 281 ~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~-~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 281 TFSLVLQKSGSSSDTIDVSVPISKMLLPVDKS-GETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp EEEEEEECTTCSSCEEEEEEEGGGGEEECSSS-SCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred cEEEEEEcCCcCCCCeEEEECHHHhEEecCCC-CCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 9999994 4 789999999999986533 56895 88876556899999999999999999999999999999864
|
| >3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=466.30 Aligned_cols=335 Identities=21% Similarity=0.350 Sum_probs=261.9
Q ss_pred eeec-cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCC
Q 009271 100 HFFG-NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (538)
Q Consensus 100 ~~~~-~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 178 (538)
+++. |+.+..||++|.||||||+|.|+|||||+++||+|. .| .+|+|++.++|.++.
T Consensus 12 ~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~~--------------------~~Sst~~~~~C~s~~ 69 (403)
T 3aup_A 12 LPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--QQ--------------------YSSKTYQAPFCHSTQ 69 (403)
T ss_dssp EEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SC--------------------CCCSSCBCCCTTBHH
T ss_pred EeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--CC--------------------CCCCCCCccCCCCcc
Confidence 5555 667889999999999999999999999999999985 12 359999999999888
Q ss_pred CCCCC--C---CCCC------CCCCceeEecC-CCCceEEEEEEEEEEEeccCCCCC---CCccccccEEEEEEEeecCC
Q 009271 179 CKSRS--S---CKSL------KDPCPYIADYS-TEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRKQTGS 243 (538)
Q Consensus 179 C~~~~--~---C~~~------~~~c~y~~~Y~-dg~ss~~G~l~~D~v~l~~~~~~~---~~~~~~~~~~fGc~~~~~g~ 243 (538)
|.... . |.++ ++.|.|.+.|+ |+ +++.|.+++|+|+|++..+.. .....++++.|||++.+.+.
T Consensus 70 C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~-~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~ 148 (403)
T 3aup_A 70 CSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQ-QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQ 148 (403)
T ss_dssp HHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTT-EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGS
T ss_pred ccCccccCccccCCCCCCCCCCCcceeEeecCCCC-ceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccc
Confidence 86531 1 2121 24699999998 54 789999999999998743210 00124578999999987544
Q ss_pred -CCCCCCCceEEeeCCCCCChHHHHHhcCCCCCceEEeecC--CCCccEEeCCCCCC------------CceeeeeeecC
Q 009271 244 -YLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPA------------TQQSTSFLPIG 308 (538)
Q Consensus 244 -~~~~~~~dGIlGLG~~~~Sl~sqL~~~g~i~~~FS~cl~~--~~~G~l~fG~~d~~------------~~~~tplv~~~ 308 (538)
+.. ...|||||||++.+|+++||++..+.+++||+||.+ +..|.|+||+ |+. ...|+|++...
T Consensus 149 ~~~~-~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~ 226 (403)
T 3aup_A 149 KGLP-RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL 226 (403)
T ss_dssp SSSS-TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT
T ss_pred cCCC-CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC
Confidence 322 367999999999999999998665556999999987 4679999999 643 44699998753
Q ss_pred CCCceEEEeEeEEEECCeEe-ec-C-C--------ceEEEcCCCccccccHHHHHHHHHHHHHhhccccccccccccccc
Q 009271 309 EKYDAYFVGVESYCIGNSCL-TQ-S-G--------FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYC 377 (538)
Q Consensus 309 ~~~~~y~V~l~~i~Vgg~~l-~~-~-~--------~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C 377 (538)
..+|.|+|++|.||++.+ .. . . .++||||||++++||+++|++|.++|.+++...........+++|
T Consensus 227 --~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c 304 (403)
T 3aup_A 227 --QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLC 304 (403)
T ss_dssp --TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCE
T ss_pred --CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCce
Confidence 258999999999999988 42 1 1 249999999999999999999999998876542221112245678
Q ss_pred ccccccccccCccEEEEEcCC--eeeeeecceeEEeecCCcceEEEEEEecCC---CceeEcceeeeeeEEEEeCCCCEE
Q 009271 378 YNASSEEMLKVPDMRLIFSKN--QSFVVRNHIFSFPENEGFTVFCLTVMSTDG---DYGIIGQNFMMGHRIVFDRENLKL 452 (538)
Q Consensus 378 y~~~~~~~~~~P~it~~f~gg--~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~IlG~~fl~~~yvVFD~e~~rI 452 (538)
|+ |.....+|.|+|+|.|+ ..|.|++++|++...+ +.+|++|+..+. +.||||+.||+++|+|||++++||
T Consensus 305 ~~--c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rI 380 (403)
T 3aup_A 305 FN--SNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRV 380 (403)
T ss_dssp EC--GGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEE
T ss_pred EE--CCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEE
Confidence 86 44444799999999776 6899999999987643 579999988753 589999999999999999999999
Q ss_pred EE-------eecCCCccccc
Q 009271 453 AW-------SHSKCEEVIDK 465 (538)
Q Consensus 453 Gf-------a~~~C~~~~~~ 465 (538)
|| ++++|.++.+.
T Consensus 381 Gf~A~~~~~~~~~C~~~~~~ 400 (403)
T 3aup_A 381 GFSTSSLHSHGVKCADLFNF 400 (403)
T ss_dssp EEESSCGGGGTCCGGGSCCT
T ss_pred EEecccccccCCCccccccc
Confidence 99 77888876543
|
| >1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-55 Score=455.04 Aligned_cols=307 Identities=22% Similarity=0.356 Sum_probs=250.1
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 175 (538)
.+++.|+.+..||++|.||||+|+|.|++||||+++||+|. |. .|.. ++.|+|++|+|++..
T Consensus 14 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~--- 78 (351)
T 1tzs_A 14 KEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT------------HSRFQPSQSSTYSQP--- 78 (351)
T ss_dssp CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT------------SCCBCGGGCTTCBCC---
T ss_pred ceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC------------CCcCCcccCcceEEC---
Confidence 45666778889999999999999999999999999999998 85 5643 468999999999964
Q ss_pred CCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEe
Q 009271 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (538)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (538)
.|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+.+.++.....|||||
T Consensus 79 ---------------~~~~~i~Yg~G-s-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilG 133 (351)
T 1tzs_A 79 ---------------GQSFSIQYGTG-S-LSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTFVDAEFDGILG 133 (351)
T ss_dssp ---------------SCEEEEESSSC-E-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEE
T ss_pred ---------------CCEEEEEeCCC-C-eEEEEEEeEEEECCe--------EECCeEEEEEEeccccccccCCCceEEe
Confidence 48999999996 4 789999999999864 3678999999988775443346799999
Q ss_pred eCCCCCC------hHHHHHhcCCCC-CceEEeecCCC----CccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeE
Q 009271 256 LGLGDVS------VPSLLAKAGLIQ-NSFSICFDEND----SGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVES 320 (538)
Q Consensus 256 LG~~~~S------l~sqL~~~g~i~-~~FS~cl~~~~----~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~ 320 (538)
||+..++ ++.+|+++|+|. ++||+||.+.. .|.|+||++|+.++ .|+|++. ..+|.|.|++
T Consensus 134 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~ 209 (351)
T 1tzs_A 134 LGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDN 209 (351)
T ss_dssp CSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEE
T ss_pred cCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCE
Confidence 9998754 778999999996 99999998752 79999999998764 4888864 3689999999
Q ss_pred EEECCeEee-cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 321 YCIGNSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 321 i~Vgg~~l~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
|.||++.+. .....+||||||++++||+++|++|.+++.+... . +.....|+. ...+|+|+|+| ||.
T Consensus 210 i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~--g~~~~~C~~-----~~~~P~i~f~f-~g~ 277 (351)
T 1tzs_A 210 IQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV----D--GEYAVECAN-----LNVMPDVTFTI-NGV 277 (351)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----S--SSEEECGGG-----GGGSCCEEEEE-TTE
T ss_pred EEECCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCccc----C--CeEEEeCCC-----CccCCcEEEEE-CCE
Confidence 999999854 3567899999999999999999999988754321 1 111224554 35789999999 779
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
++.|++++|++...+.....|+ +|+..+ .+.||||+.||+++|+|||++++|||||+++|..
T Consensus 278 ~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 278 PYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp EEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 9999999999876432246896 687652 4589999999999999999999999999999975
|
| >2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-55 Score=458.71 Aligned_cols=303 Identities=23% Similarity=0.403 Sum_probs=250.5
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC----CCCCCccccccccCCCCCCCCCCCCCCCcccc
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI----QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~----~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~ 173 (538)
.+++.|+.+..||++|.||||||+|.|++||||+++||+|. |. .|.. ++.|+|++|+||+..
T Consensus 52 ~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~------------~~~y~~~~SsT~~~~- 118 (383)
T 2x0b_A 52 SVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY------------HKLFDASDSSSYKHN- 118 (383)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT------------SCCBCGGGCTTCEEE-
T ss_pred eEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC------------CCCCCCCCCCcEEEC-
Confidence 36677889999999999999999999999999999999998 74 4643 368999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceE
Q 009271 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGV 253 (538)
Q Consensus 174 C~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGI 253 (538)
.|.|.++|++| + ++|.+++|+|+|++. .+. +.|||++.+.|..+.....|||
T Consensus 119 -----------------~~~~~i~Yg~G-s-~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f~~~~~dGI 170 (383)
T 2x0b_A 119 -----------------GTELTLRYSTG-T-VSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPFMLAEFDGV 170 (383)
T ss_dssp -----------------EEEEEEECSSC-E-EEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHHTTCSSSEE
T ss_pred -----------------CcEEEEEcCCc-c-EEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCcccccCCCceE
Confidence 38999999996 4 899999999999874 356 9999999987754333478999
Q ss_pred EeeCCCCCC------hHHHHHhcCCCC-CceEEeecCC--C----CccEEeCCCCCCCce----eeeeeecCCCCceEEE
Q 009271 254 MGLGLGDVS------VPSLLAKAGLIQ-NSFSICFDEN--D----SGSVFFGDQGPATQQ----STSFLPIGEKYDAYFV 316 (538)
Q Consensus 254 lGLG~~~~S------l~sqL~~~g~i~-~~FS~cl~~~--~----~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V 316 (538)
||||+..++ ++.+|.++|+|. ++||+||.++ . .|.|+|||+|+.++. |+|+.. ..+|.|
T Consensus 171 lGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v 246 (383)
T 2x0b_A 171 VGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQI 246 (383)
T ss_dssp EECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEE
T ss_pred eccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEE
Confidence 999998764 678999999996 9999999875 2 799999999998753 888753 369999
Q ss_pred eEeEEEECCeEe-ecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEE
Q 009271 317 GVESYCIGNSCL-TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIF 395 (538)
Q Consensus 317 ~l~~i~Vgg~~l-~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f 395 (538)
.+++|.||++.+ ......+||||||+++++|.++|++|.+++.+.. ..+.....|+. ...+|+|+|+|
T Consensus 247 ~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~g~~~v~C~~-----~~~~P~i~f~~ 315 (383)
T 2x0b_A 247 QMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK------RLFDYVVKCNE-----GPTLPDISFHL 315 (383)
T ss_dssp EECEEEESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------CSSCEEEEGGG-----TTTCCCEEEEE
T ss_pred EEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------cCCcEEEeccc-----cccCceEEEEE
Confidence 999999999874 3456789999999999999999999998875432 11112223554 45789999999
Q ss_pred cCCeeeeeecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 396 SKNQSFVVRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 396 ~gg~~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
||..|.|++++|++...+.....|+ +|+..+ ++.||||+.||++||+|||++|+|||||+++
T Consensus 316 -~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 316 -GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp -TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 6799999999999876543246996 687652 4589999999999999999999999999863
|
| >1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-54 Score=444.95 Aligned_cols=299 Identities=22% Similarity=0.373 Sum_probs=251.3
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQ--CAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+++.|+.+..||++|.||||+|+|.|++||||+++||+|. |.. |.. ++.|+|++|+|++..
T Consensus 5 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~---- 68 (329)
T 1dpj_A 5 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL------------HSKYDHEASSSYKAN---- 68 (329)
T ss_dssp EECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT------------SCCBCGGGCTTCEEE----
T ss_pred eeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC------------cCcCCcccCcCeEEC----
Confidence 5666778889999999999999999999999999999998 865 543 368999999999964
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecC-CCCCCCCCceEEe
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG-SYLDGAAPDGVMG 255 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g-~~~~~~~~dGIlG 255 (538)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+ .|.. ...|||||
T Consensus 69 --------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~-~~~~GilG 123 (329)
T 1dpj_A 69 --------------GTEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAF-GKFDGILG 123 (329)
T ss_dssp --------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTT-CSCSEEEE
T ss_pred --------------CcEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEEEEEecCcccccc-CCcceEEE
Confidence 48999999996 5899999999999864 367899999998876 3332 36799999
Q ss_pred eCCCCCC------hHHHHHhcCCCC-CceEEeecCC-----CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEe
Q 009271 256 LGLGDVS------VPSLLAKAGLIQ-NSFSICFDEN-----DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 256 LG~~~~S------l~sqL~~~g~i~-~~FS~cl~~~-----~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~ 319 (538)
||+..++ +..+|+++|+|+ ++||+||.+. ..|.|+||++|+.++. |+|+.. ..+|.|.++
T Consensus 124 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~ 199 (329)
T 1dpj_A 124 LGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFE 199 (329)
T ss_dssp CSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEE
T ss_pred eCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEee
Confidence 9998765 457899999996 9999999764 3699999999987653 788753 368999999
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
+|.||++.+......+||||||++++||+++|++|.+++.+. . ....||.++|.....+|+|+|+| +|.
T Consensus 200 ~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~------~~~g~~~~~C~~~~~~P~i~f~f-~g~ 268 (329)
T 1dpj_A 200 GIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAK----K------GWTGQYTLDCNTRDNLPDLIFNF-NGY 268 (329)
T ss_dssp EEEETTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCE----E------CTTSSEEECGGGGGGCCCEEEEE-TTE
T ss_pred eEEECCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCc----c------CCCCeEEEECCCCCcCCcEEEEE-CCE
Confidence 999999998766788999999999999999999999887532 1 11336677776666899999999 578
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEec-----CCCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMST-----DGDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++.|++++|++... ..|+ +|+.. .++.||||+.|||++|+|||++++|||||+++
T Consensus 269 ~~~i~~~~y~~~~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 269 NFTIGPYDYTLEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEECTTTSEEEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhEecCC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99999999999763 4896 67764 23589999999999999999999999999864
|
| >3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-54 Score=453.33 Aligned_cols=302 Identities=24% Similarity=0.353 Sum_probs=250.9
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 178 (538)
+++.|+.+..||++|.||||||+|.|++||||+++||+|. |..|. |..++.|+|++|+|++...
T Consensus 48 ~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~----------C~~~~~y~~~~SsT~~~~~----- 112 (370)
T 3psg_A 48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLA----------CSDHNQFNPDDSSTFEATS----- 112 (370)
T ss_dssp CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGG----------GTTSCCBCGGGCTTCEEEE-----
T ss_pred ecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcc----------cCCCCCCCCccCcCcEECC-----
Confidence 5577899999999999999999999999999999999998 75431 1235799999999999764
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCC
Q 009271 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (538)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~ 258 (538)
|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+.+.+......|||||||+
T Consensus 113 -------------~~~~i~Yg~G-s-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~ 169 (370)
T 3psg_A 113 -------------QELSITYGTG-S-MTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGLAY 169 (370)
T ss_dssp -------------EEEEEESSSC-E-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred -------------cEEEEEeCCc-e-EEEEEEEEEEeeCCc--------ccCCeEEEEEEeecccccccCCccceeccCC
Confidence 8899999996 4 899999999999874 4688999999988775544457899999998
Q ss_pred CCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECC
Q 009271 259 GDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGN 325 (538)
Q Consensus 259 ~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg 325 (538)
+.+ +++++|.++|+|. ++||+||.++ ..|.|+|||+|+.++ .|+|+.. ..+|.|.+++|.||+
T Consensus 170 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g 245 (370)
T 3psg_A 170 PSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDG 245 (370)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSS
T ss_pred ccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECC
Confidence 775 4788999999997 9999999875 579999999999765 4888864 268999999999999
Q ss_pred eEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 326 SCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 326 ~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
+.+.. ....+||||||++++||+++|++|.+++.+... . ..+|.++|.....+|+|+|+| ||.++.|+
T Consensus 246 ~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~-----~g~~~v~C~~~~~lP~i~f~~-~g~~~~l~ 314 (370)
T 3psg_A 246 ETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----S-----DGEMVISCSSIDSLPDIVFTI-DGVQYPLS 314 (370)
T ss_dssp SEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----T-----TCCEECCGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred EEEecCCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----C-----CCcEEEECCCcccCCcEEEEE-CCEEEEEC
Confidence 88753 567899999999999999999999987753221 1 225666676667899999999 77999999
Q ss_pred cceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 405 NHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
+++|++. . ...|+ +|+..+ ++.||||+.||+++|+|||++|+|||||++.
T Consensus 315 ~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 315 PSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999998 3 24695 676643 2369999999999999999999999999873
|
| >1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-54 Score=442.36 Aligned_cols=299 Identities=21% Similarity=0.359 Sum_probs=249.2
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+++.|+.+..||++|.||||||+|.|++||||+++||+|. |. .|.. ++.|+|++|+|++...
T Consensus 4 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~--- 68 (324)
T 1am5_A 4 EQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN------------HNKFKPRQSSTYVETG--- 68 (324)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT------------SCCBCGGGCTTCEEEE---
T ss_pred eeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC------------CCcCCCccCCCeEeCC---
Confidence 4566778899999999999999999999999999999997 75 3543 3689999999999753
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+.+.+......||||||
T Consensus 69 ---------------~~~~i~Yg~G-s-~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGL 123 (324)
T 1am5_A 69 ---------------KTVDLTYGTG-G-MRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQAAAPFDGILGL 123 (324)
T ss_dssp ---------------EEEEEECSSC-E-EEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTTTCSSSEEEEC
T ss_pred ---------------cEEEEEECCC-C-eEEEEEECceeECCc--------EEcccEEEEEEecccccccCCCCceEEec
Confidence 8999999996 3 599999999999864 36789999999987765444467999999
Q ss_pred CCCCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEE
Q 009271 257 GLGDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCI 323 (538)
Q Consensus 257 G~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~V 323 (538)
|+..+ +++++|+++|+|. ++||+||.++ ..|.|+||++|+.++ .|+|++. ..+|.|.+++|.|
T Consensus 124 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 199 (324)
T 1am5_A 124 AYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITV 199 (324)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEE
T ss_pred CCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEE
Confidence 99865 4788999999996 9999999875 479999999998754 5999875 2689999999999
Q ss_pred CCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeee
Q 009271 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (538)
Q Consensus 324 gg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v 403 (538)
|++.+......+||||||++++||+++|++|.+++.+. . ..+.....|+. ...+|+|+|+| ||.++.|
T Consensus 200 ~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-----~~g~~~~~C~~-----~~~~P~i~f~f-~g~~~~i 267 (324)
T 1am5_A 200 NGQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS-E-----NQGEMMGNCAS-----VQSLPDITFTI-NGVKQPL 267 (324)
T ss_dssp TTEECCCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE-E-----CCCCEECCTTS-----SSSSCCEEEEE-TTEEEEE
T ss_pred CCceeeccCceEEEecCCccEECCHHHHHHHHHHhCCc-c-----cCCcEEEeCCC-----cccCCcEEEEE-CCEEEEE
Confidence 99886433478999999999999999999999888654 1 11112234543 45789999999 6799999
Q ss_pred ecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 404 RNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 404 ~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++++|++.. ...|+ +|+..+ ++.||||+.||+++|+|||++++|||||+++
T Consensus 268 ~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 268 PPSAYIEGD----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CHHHHEEES----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CHHHhcccC----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999876 35796 787653 3589999999999999999999999999874
|
| >1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-54 Score=445.15 Aligned_cols=306 Identities=20% Similarity=0.307 Sum_probs=246.1
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C 179 (538)
+++.|. +..||++|.||||+|+|.|++||||+++||+|.|..|...........|..++.|+|++|+|++...
T Consensus 5 ~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------ 77 (334)
T 1j71_A 5 TTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------ 77 (334)
T ss_dssp EEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE------
T ss_pred EEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC------
Confidence 344443 6789999999999999999999999999999763233221000001123356799999999999764
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCC
Q 009271 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (538)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~ 259 (538)
|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++... ..+||||||+.
T Consensus 78 ------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilGLg~~ 129 (334)
T 1j71_A 78 ------------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMGIGFT 129 (334)
T ss_dssp ------------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSCG
T ss_pred ------------CceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEEEEEEecC-------CCccEEEEcCC
Confidence 8999999996 67899999999999864 36899999998763 45899999998
Q ss_pred CC--------ChHHHHHhcCCCC-CceEEeecC--CCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEEC
Q 009271 260 DV--------SVPSLLAKAGLIQ-NSFSICFDE--NDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIG 324 (538)
Q Consensus 260 ~~--------Sl~sqL~~~g~i~-~~FS~cl~~--~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vg 324 (538)
.+ +++.+|+++|+|+ ++||+||.+ ...|.|+||++|+.++. ++|++.. .+|.|.|++|.||
T Consensus 130 ~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~ 205 (334)
T 1j71_A 130 ADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFD 205 (334)
T ss_dssp GGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEET
T ss_pred cccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEEEC
Confidence 64 7899999999996 999999986 35799999999998754 7887542 5899999999999
Q ss_pred CeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccc-cccccccccccccCccEEEEEcCCeeeee
Q 009271 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSW-KYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (538)
Q Consensus 325 g~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~-~~Cy~~~~~~~~~~P~it~~f~gg~~~~v 403 (538)
++.+. ....+||||||++++||+++|++|.+++.++.. ....... ..|+ .+|.|+|+|.||.++.|
T Consensus 206 g~~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~~~~~~~C~--------~~p~i~f~f~~g~~~~i 272 (334)
T 1j71_A 206 GTSVS-TNADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNEIYRLPSCD--------LSGDAVFNFDQGVKITV 272 (334)
T ss_dssp TEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTTEEECSSSC--------CCSEEEEEESTTCEEEE
T ss_pred CEecc-CCccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCceEEEEcCC--------CCCceEEEEcCCcEEEE
Confidence 99887 456799999999999999999999998876542 1111111 3454 26999999987899999
Q ss_pred ecceeEEeecCCcceEEE-EEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 404 RNHIFSFPENEGFTVFCL-TVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 404 ~~~~y~~~~~~~~~~~Cl-~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
++++|++...+ +..|+ +|+.. +.||||+.|||++|+|||++++|||||+++|.+
T Consensus 273 ~~~~y~~~~~~--~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 273 PLSELILKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp EGGGGEEECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred CHHHheeecCC--CCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 99999998644 33596 45554 369999999999999999999999999999975
|
| >2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-54 Score=445.79 Aligned_cols=308 Identities=19% Similarity=0.325 Sum_probs=247.3
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+++.| .+..|+++|.||||+|+|.|+|||||+++||+|. |..|.... ....|..++.|+|++|+|++...
T Consensus 5 ~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~---~~~~C~~~~~y~~~~SsT~~~~~--- 77 (342)
T 2qzx_A 5 VTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGD---KGDFCKSAGSYSPASSRTSQNLN--- 77 (342)
T ss_dssp EEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSC---CTTGGGTTCCBCGGGCTTCEEEE---
T ss_pred EEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccC---ccccccCCCcCCcccCCCcccCC---
Confidence 34434 4678999999999999999999999999999976 54332110 01123356799999999999764
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++... ..+|||||
T Consensus 78 ---------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~-------~~~GilGL 126 (342)
T 2qzx_A 78 ---------------TRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS-------ARKGILGI 126 (342)
T ss_dssp ---------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC-------SSSCEEEC
T ss_pred ---------------CcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEecC-------CCcCEEEE
Confidence 8999999996 77899999999999864 36889999998763 45899999
Q ss_pred CCCCC--------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEE
Q 009271 257 GLGDV--------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESY 321 (538)
Q Consensus 257 G~~~~--------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i 321 (538)
|+..+ +++.+|+++|+|+ ++||+||.+. ..|.|+||++|+.++ .++|++.. .+|.|.|++|
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i 202 (342)
T 2qzx_A 127 GFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSV 202 (342)
T ss_dssp SCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEE
T ss_pred ccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEE
Confidence 99764 7899999999996 9999999863 579999999998765 48888642 5899999999
Q ss_pred EECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeee
Q 009271 322 CIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSF 401 (538)
Q Consensus 322 ~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~ 401 (538)
.||++.+. ....+||||||++++||+++|++|.+++.+.....+. . ...|..+|. .+|.|+|+|.||.++
T Consensus 203 ~v~g~~~~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~--~----~~~~~~~C~---~~p~i~f~f~~g~~~ 272 (342)
T 2qzx_A 203 NVRGRNVD-ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA--G----NKVYVADCK---TSGTIDFQFGNNLKI 272 (342)
T ss_dssp EETTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT--S----CEEEEECTT---CCCEEEEEETTTEEE
T ss_pred EECCEecC-CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC--C----CcEEEEECC---CCCcEEEEECCCcEE
Confidence 99999887 4567999999999999999999999988765432110 1 113334443 269999999878999
Q ss_pred eeecceeEEeec---CCcceEEEE-EEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 402 VVRNHIFSFPEN---EGFTVFCLT-VMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 402 ~v~~~~y~~~~~---~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
.|++++|++... ......|+. +... +.||||+.|||++|+|||++++|||||+++|..
T Consensus 273 ~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 273 SVPVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp EEEGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEcHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 999999998742 111468965 5544 369999999999999999999999999999975
|
| >2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-54 Score=440.57 Aligned_cols=297 Identities=22% Similarity=0.396 Sum_probs=246.5
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
+..+..||++|.||||+|+|.|++||||+++||+|. |..| .+ ..+.|+|++|+|++..
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~----------~~~~y~~~~SsT~~~~---------- 69 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS----------GQTKYDPNQSSTYQAD---------- 69 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT----------TSCCBCGGGCTTCEEE----------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc----------CCCCCCcccCCCeeeC----------
Confidence 456789999999999999999999999999999998 9888 22 3479999999999964
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC-
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV- 261 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~- 261 (538)
.|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++..++.|... ..|||||||+..+
T Consensus 70 --------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s 131 (325)
T 2apr_A 70 --------GRTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTIT 131 (325)
T ss_dssp --------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGC
T ss_pred --------CCEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccccC-CCceEEEeCCcccc
Confidence 38999999996 67899999999999864 35789999999887766443 4799999998765
Q ss_pred ------ChHHHHHhcCCCC-CceEEeecC---CCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeE
Q 009271 262 ------SVPSLLAKAGLIQ-NSFSICFDE---NDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSC 327 (538)
Q Consensus 262 ------Sl~sqL~~~g~i~-~~FS~cl~~---~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~ 327 (538)
+++++|+++|+|. ++||+||.+ ...|.|+||++|+.++ .|+|++.. ..+|.|.+++|.||+ .
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~ 207 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-S 207 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-E
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-E
Confidence 4789999999886 999999953 4679999999998764 48888532 368999999999999 4
Q ss_pred eecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecce
Q 009271 328 LTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHI 407 (538)
Q Consensus 328 l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~ 407 (538)
+....+.+||||||++++||+++|++|++++.+++... ......|+. ..+|+|+|+|.| .++.|++++
T Consensus 208 ~~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-----g~~~~~C~~------~~~p~i~f~f~g-~~~~ip~~~ 275 (325)
T 2apr_A 208 TVASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-----GTYTISCDT------SAFKPLVFSING-ASFQVSPDS 275 (325)
T ss_dssp EEECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-----SCEEECSCG------GGCCCEEEEETT-EEEEECGGG
T ss_pred ecCCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-----CeEEEECCC------CCCCcEEEEECC-EEEEECHHH
Confidence 55467889999999999999999999999987765432 111224552 248999999955 599999999
Q ss_pred eEEeecCCcceEEEE-EEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 408 FSFPENEGFTVFCLT-VMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 408 y~~~~~~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
|++... +..|++ |+..+.+.||||+.|||++|+|||++++|||||+..
T Consensus 276 ~~~~~~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 276 LVFEEF---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp GEEEEE---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEcCC---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 988654 468975 565555689999999999999999999999999863
|
| >3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-54 Score=443.75 Aligned_cols=300 Identities=21% Similarity=0.360 Sum_probs=247.0
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-C--CCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-C--IQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C--~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+++.|+.+..||++|.||||||+|.|++||||+++||+|. | ..|.. ++.|+|++|+|++...
T Consensus 6 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~--- 70 (323)
T 3cms_A 6 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN------------HQRFDPRKSSTFQNLG--- 70 (323)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT------------SCCBCGGGCTTCEEEE---
T ss_pred eeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC------------CCCCCCccCCCeEECC---
Confidence 5566888899999999999999999999999999999998 7 44643 3689999999999763
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+.+..+.....||||||
T Consensus 71 ---------------~~~~i~Yg~G-s-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGL 125 (323)
T 3cms_A 71 ---------------KPLSIHYGTG-S-MQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFTYAEFDGILGM 125 (323)
T ss_dssp ---------------EEEEEEETTE-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHHSSCSEEEEC
T ss_pred ---------------cEEEEEeCCC-C-eEEEEEEEEEEECCe--------EEeccEEEEEEecccccccccCCceEEec
Confidence 8999999996 4 799999999999864 36789999999887632222256999999
Q ss_pred CCCCC------ChHHHHHhcCCCC-CceEEeecCC-CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEEC
Q 009271 257 GLGDV------SVPSLLAKAGLIQ-NSFSICFDEN-DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIG 324 (538)
Q Consensus 257 G~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~-~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vg 324 (538)
|+..+ +++++|+++|+|. ++||+||.++ ..|.|+||++|+.++ .|+|++. ..+|.|.+++|.||
T Consensus 126 g~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~ 201 (323)
T 3cms_A 126 AYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTIS 201 (323)
T ss_dssp SCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEET
T ss_pred CcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEEC
Confidence 98764 5788999999996 9999999875 459999999998865 3788853 36899999999999
Q ss_pred CeEee-cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeee
Q 009271 325 NSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (538)
Q Consensus 325 g~~l~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v 403 (538)
++.+. .....+||||||++++||+++|++|.+++.+... ... .|..+|.....+|+|+|+| ||.++.|
T Consensus 202 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~g-----~~~~~C~~~~~~P~i~f~f-~g~~~~i 270 (323)
T 3cms_A 202 GVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQN-----QYG-----EFDIDCDNLSYMPTVVFEI-NGKMYPL 270 (323)
T ss_dssp TEEEESTTCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE-----TTT-----EEEECTTCTTTSCCEEEEE-TTEEEEE
T ss_pred CEEeecCCCcEEEEecCCccEeCCHHHHHHHHHHhCCeec-----CCC-----cEEEECCCCccCceEEEEE-CCEEEEE
Confidence 99875 3567899999999999999999999988754211 111 2233343345789999999 6799999
Q ss_pred ecceeEEeecCCcceEEE-EEEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 404 RNHIFSFPENEGFTVFCL-TVMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 404 ~~~~y~~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++++|++.. ...|+ +|+..+ ++.||||+.||+++|+|||++++|||||+++
T Consensus 271 ~~~~y~~~~----~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 271 TPSAYTSQD----QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp CHHHHEEEE----TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhccCC----CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 999999982 46896 587763 4689999999999999999999999999864
|
| >1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-53 Score=447.75 Aligned_cols=317 Identities=19% Similarity=0.353 Sum_probs=246.2
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCC--
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKS-- 181 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~-- 181 (538)
++.+.+||++|.|||| |+|||||+++||+|.+ | .+++.++|.++.|..
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~--~-----------------------~~~~~~~C~s~~C~~~~ 59 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDG--G-----------------------QPPAEIPCSSPTCLLAN 59 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCT--T-----------------------CCCCCCBTTSHHHHHHH
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCC--C-----------------------CCCCccCCCCchhcccc
Confidence 6677899999999998 9999999999999861 1 124455666655642
Q ss_pred ---CCCCCCC-------CCCC-ceeEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccc----EEEEEEEeecCCCCC
Q 009271 182 ---RSSCKSL-------KDPC-PYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSS----VIIGCGRKQTGSYLD 246 (538)
Q Consensus 182 ---~~~C~~~-------~~~c-~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~----~~fGc~~~~~g~~~~ 246 (538)
...|... +..| .|.++|+|| +.++|.+++|+|+|++.++. ....+ +.|||++.+.+....
T Consensus 60 ~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~----~~v~~~~~~~~Fg~~~~~~~~~~~ 134 (381)
T 1t6e_X 60 AYPAPGCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGS----KPVSKVNVGVLAACAPSKLLASLP 134 (381)
T ss_dssp SSCCTTCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSS----SEEEEEEEEEEEEECCGGGGTTSC
T ss_pred CCCCCCCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCC----ccccceeeeeEeecCcccccCCCC
Confidence 1244421 2457 599999996 67799999999999864321 11233 478999886322111
Q ss_pred CCCCceEEeeCCCCCChHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCC------CceeeeeeecCCCCceEEEeEeE
Q 009271 247 GAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPA------TQQSTSFLPIGEKYDAYFVGVES 320 (538)
Q Consensus 247 ~~~~dGIlGLG~~~~Sl~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~------~~~~tplv~~~~~~~~y~V~l~~ 320 (538)
...|||||||++++|+++||+++++++++||+||.++..|.|+||+.+.. ...|||++..+.. .+|.|+|++
T Consensus 135 -~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~ 212 (381)
T 1t6e_X 135 -RGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARS 212 (381)
T ss_dssp -TTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEE
T ss_pred -CCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEE
Confidence 36799999999999999999999988899999999877899999997653 3469999865332 467799999
Q ss_pred EEECCeEeecC-----CceEEEcCCCccccccHHHHHHHHHHHHHhhcc--------cccccccccccccccccccc---
Q 009271 321 YCIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS--------KRISLQGNSWKYCYNASSEE--- 384 (538)
Q Consensus 321 i~Vgg~~l~~~-----~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~--------~~~~~~~~~~~~Cy~~~~~~--- 384 (538)
|+||++.+... ..++||||||++++||+++|++|.++|.+++.. .+.......+..||+.++..
T Consensus 213 i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~ 292 (381)
T 1t6e_X 213 IVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNL 292 (381)
T ss_dssp EEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEET
T ss_pred EEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccc
Confidence 99999988632 246999999999999999999999999887752 11111224567899876532
Q ss_pred -cccCccEEEEEcCCeeeeeecceeEEeecCCcceEEEEEEecCC--------CceeEcceeeeeeEEEEeCCCCEEEEe
Q 009271 385 -MLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDG--------DYGIIGQNFMMGHRIVFDRENLKLAWS 455 (538)
Q Consensus 385 -~~~~P~it~~f~gg~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~~--------~~~IlG~~fl~~~yvVFD~e~~rIGfa 455 (538)
...+|+|+|+|+||.+|.|++++|++...+ +..|++|+..+. +.||||+.||+++|+|||++|+|||||
T Consensus 293 ~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 293 GGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp TEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred cCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 136899999998779999999999987643 579999988653 479999999999999999999999999
Q ss_pred ecCC
Q 009271 456 HSKC 459 (538)
Q Consensus 456 ~~~C 459 (538)
++..
T Consensus 371 ~~~~ 374 (381)
T 1t6e_X 371 RLPH 374 (381)
T ss_dssp ECCT
T ss_pred cccC
Confidence 9754
|
| >2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-53 Score=446.14 Aligned_cols=324 Identities=19% Similarity=0.284 Sum_probs=256.4
Q ss_pred eccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCC
Q 009271 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (538)
Q Consensus 102 ~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~ 180 (538)
+.+..+..||++|.||||+|+|.|+|||||+++||+|. |..| .+.|+|++|+|++.+.
T Consensus 7 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~f~~~~SsT~~~~~------- 65 (383)
T 2ewy_A 7 LQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--------------DTYFDTERSSTYRSKG------- 65 (383)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--------------SCCCCGGGCTTCEEEE-------
T ss_pred ccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--------------ccCcccccCccceeCC-------
Confidence 44566778999999999999999999999999999997 7655 2689999999999764
Q ss_pred CCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCC
Q 009271 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260 (538)
Q Consensus 181 ~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~ 260 (538)
|.|.+.|++| + ++|.+++|+|+|++.. .....+.|+|.....+.|......|||||||+..
T Consensus 66 -----------~~~~i~Yg~G-s-~~G~~~~Dtv~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~ 126 (383)
T 2ewy_A 66 -----------FDVTVKYTQG-S-WTGFVGEDLVTIPKGF------NTSFLVNIATIFESENFFLPGIKWNGILGLAYAT 126 (383)
T ss_dssp -----------EEEEEECSSC-E-EEEEEEEEEEEETTTE------EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGG
T ss_pred -----------ceEEEEECCc-E-EEEEEEEEEEEECCCc------cceeEEEEEEEEeecceeeccCcCceEEecCchh
Confidence 8899999996 4 6899999999998631 1223578999887777665444679999999876
Q ss_pred CC--------hHHHHHhcCCCCCceEEeecC---------CCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEe
Q 009271 261 VS--------VPSLLAKAGLIQNSFSICFDE---------NDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 261 ~S--------l~sqL~~~g~i~~~FS~cl~~---------~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~ 319 (538)
++ ++.+|.+++.++++||+||.+ ...|.|+||++|+.++ .|+|++. ..+|.|.++
T Consensus 127 ~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~ 202 (383)
T 2ewy_A 127 LAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEIL 202 (383)
T ss_dssp GCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEE
T ss_pred cccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEE
Confidence 54 567899998888899999952 2579999999998764 4888864 268999999
Q ss_pred EEEECCeEeecC-----CceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccc--cccccccccccccccccCccEE
Q 009271 320 SYCIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDMR 392 (538)
Q Consensus 320 ~i~Vgg~~l~~~-----~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~it 392 (538)
+|.||++.+... ...+||||||++++||+++|++|.++|.+.......... ......|+.........+|+|+
T Consensus 203 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 282 (383)
T 2ewy_A 203 KLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKIS 282 (383)
T ss_dssp EEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEE
T ss_pred EEEECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEE
Confidence 999999988532 357999999999999999999999999886643211110 0123578876544445789999
Q ss_pred EEEcCC-----eeeeeecceeEEeecC-CcceEEEE--EEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcccc
Q 009271 393 LIFSKN-----QSFVVRNHIFSFPENE-GFTVFCLT--VMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVID 464 (538)
Q Consensus 393 ~~f~gg-----~~~~v~~~~y~~~~~~-~~~~~Cl~--i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~~ 464 (538)
|+|.|+ .++.|++++|++...+ +.+..|++ +.+.+ +.||||+.|||++|+|||++++|||||+++|....+
T Consensus 283 f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 361 (383)
T 2ewy_A 283 IYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPST-NALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAG 361 (383)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEES-SCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSS
T ss_pred EEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCCC-CcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCC
Confidence 999775 3689999999987642 12468975 45543 579999999999999999999999999999987655
Q ss_pred cccccC
Q 009271 465 KSHVHL 470 (538)
Q Consensus 465 ~~~~~~ 470 (538)
...++.
T Consensus 362 ~~i~~i 367 (383)
T 2ewy_A 362 AAVSEI 367 (383)
T ss_dssp CBCEEE
T ss_pred cceeee
Confidence 555544
|
| >4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-54 Score=440.31 Aligned_cols=300 Identities=22% Similarity=0.380 Sum_probs=247.3
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQ--CAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+++.|+.+..||++|.||||||+|.|++||||+++||+|. |.. |. .++.|+|++|+|++...
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~------------~~~~y~~~~SsT~~~~~--- 67 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCK------------NHHRFDPRKSSTFRNLG--- 67 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH------------TSCCBCGGGCTTCEEEE---
T ss_pred ccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccC------------CCCCCCCCCCcCeEcCC---
Confidence 4566888899999999999999999999999999999998 763 43 24699999999999764
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++...+........+|||||
T Consensus 68 ---------------~~~~i~Yg~g-s-~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGL 122 (320)
T 4aa9_A 68 ---------------KPLSIHYGTG-S-MEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTYSEFDGILGL 122 (320)
T ss_dssp ---------------EEEEEEETTE-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHSCCCSEEEEC
T ss_pred ---------------cEEEEEECCc-E-EEEEEEEEEEEECCE--------eecCeEEEEEEEcccccccccCcccEEec
Confidence 8999999996 4 799999999999874 36889999999887743333467999999
Q ss_pred CCCCC------ChHHHHHhcCCCC-CceEEeecCC-CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEEC
Q 009271 257 GLGDV------SVPSLLAKAGLIQ-NSFSICFDEN-DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIG 324 (538)
Q Consensus 257 G~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~-~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vg 324 (538)
|+..+ +++++|.++|+|. ++||+||.++ ..|.|+||++|+.++. |+|++. ..+|.|.+++|.||
T Consensus 123 g~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~ 198 (320)
T 4aa9_A 123 AYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTIN 198 (320)
T ss_dssp SCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEET
T ss_pred CcccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEEC
Confidence 98754 5788999999996 9999999984 6899999999998753 788753 36899999999999
Q ss_pred CeEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeee
Q 009271 325 NSCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (538)
Q Consensus 325 g~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v 403 (538)
++.+.. ....+||||||++++||+++|++|.+++.+... . ...|..+|.....+|+|+|+| ||.++.|
T Consensus 199 ~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~-----~g~~~~~C~~~~~~p~i~f~f-~g~~~~l 267 (320)
T 4aa9_A 199 GVAVACVGGCQAILDTGTSVLFGPSSDILKIQMAIGATEN-----R-----YGEFDVNCGNLRSMPTVVFEI-NGRDYPL 267 (320)
T ss_dssp TEEEESTTCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-----T-----TSCEEECGGGGGGCCCEEEEE-TTEEEEE
T ss_pred CEEeccCCCcEEEEECCCCcEECCHHHHHHHHHHhCCccc-----C-----CCcEEEeCCCCCcCceEEEEE-CCEEEEE
Confidence 998863 456899999999999999999999987753321 1 123455555556789999999 6799999
Q ss_pred ecceeEEeecCCcceEEE-EEEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 404 RNHIFSFPENEGFTVFCL-TVMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 404 ~~~~y~~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++++|+... ...|+ +|+... ++.||||+.|||++|+|||++++|||||+++
T Consensus 268 ~~~~y~~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 268 SPSAYTSKD----QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp CHHHHEEEE----TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhccCC----CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 999999763 46896 677754 3579999999999999999999999999874
|
| >2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-54 Score=458.45 Aligned_cols=302 Identities=19% Similarity=0.287 Sum_probs=247.6
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 174 (538)
..+++.|+.+..||++|.||||||+|.|++||||+++||+|. |. .|.. ++.|+|++|+|++...
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~------------~~~ydps~SsT~~~~~- 194 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT------------KHLYDSSKSRTYEKDG- 194 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG------------SCCBCGGGCTTCEEEE-
T ss_pred CceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC------------CCcCCCccCCceeECC-
Confidence 346677888899999999999999999999999999999998 85 4542 4689999999999753
Q ss_pred CCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeec--CCCCCCCCCce
Q 009271 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQT--GSYLDGAAPDG 252 (538)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~--g~~~~~~~~dG 252 (538)
|.|.+.|++| + ++|.+++|+|+|++. ... +.|||++.+. |.+......||
T Consensus 195 -----------------~~~~i~YgdG-s-~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f~~~~~dG 246 (453)
T 2bju_A 195 -----------------TKVEMNYVSG-T-VSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTYTASTFDG 246 (453)
T ss_dssp -----------------EEEEEECSSS-E-EEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHHHHSSCCE
T ss_pred -----------------cEEEEEcCCC-C-eEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccccccCCce
Confidence 8999999996 4 799999999999874 246 9999999987 65332236799
Q ss_pred EEeeCCCCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEe
Q 009271 253 VMGLGLGDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 253 IlGLG~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~ 319 (538)
|||||++.+ +++++|.++|+|. ++||+||.++ ..|.|+|||+|+.++ .|+|++. ..+|.|.++
T Consensus 247 IlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~ 322 (453)
T 2bju_A 247 ILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD 322 (453)
T ss_dssp EEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE
T ss_pred eEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE
Confidence 999998764 4678999999996 9999999875 579999999998765 4899864 368999999
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
|.||++ +. ....+||||||++++||+++|++|.+++.+. . ...+ .+|..+|.. ..+|+|+|+| ||.
T Consensus 323 -I~Vgg~-~~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~-~~~g----~~~~v~C~~-~~~P~itf~f-gg~ 388 (453)
T 2bju_A 323 -AHVGNI-ML-EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----K-VPFL----PFYVTLCNN-SKLPTFEFTS-ENG 388 (453)
T ss_dssp -EEETTE-EE-EEEEEEECTTCCSEEECHHHHHHHTTTSSCE----E-CTTS----SCEEEETTC-TTCCCEEEEC-SSC
T ss_pred -EEECcE-Ee-ccccEEEcCCCCeEecCHHHHHHHHHHhCCc----c-cCCC----ceEEEecCC-CCCCcEEEEE-CCE
Confidence 999994 43 5678999999999999999999998766432 1 1111 133344433 4789999999 679
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
.+.|++++|++.........|+ +|++.+ .+.||||+.||+++|+|||++++|||||+++
T Consensus 389 ~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 389 KYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EEEECHHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999999999986542256996 788765 3589999999999999999999999999975
|
| >3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-54 Score=443.91 Aligned_cols=307 Identities=23% Similarity=0.384 Sum_probs=252.6
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
.+++.|+.+..||++|.||||||++.|++||||+++||+|. |..|.. . |..++.|+|++|+|++..
T Consensus 9 ~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~-~-------C~~~~~y~~~~SsT~~~~----- 75 (341)
T 3k1w_A 9 SVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYT-A-------CVYHKLFDASDSSSYKHN----- 75 (341)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCH-H-------HHTSCCBCGGGCTTCEEE-----
T ss_pred cccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCC-c-------ccCCCCCCCCcCcCeeEC-----
Confidence 46677888999999999999999999999999999999998 863210 0 113469999999999964
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
.|.|.+.|++| + +.|.+++|+|+|++. .. ++.|||++...+........+||||||
T Consensus 76 -------------~~~~~i~Yg~g-s-~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~~~~~~~GilGLg 131 (341)
T 3k1w_A 76 -------------GTELTLRYSTG-T-VSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPFMLAEFDGVVGMG 131 (341)
T ss_dssp -------------EEEEEEEETTE-E-EEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHHTTCSSSEEEECS
T ss_pred -------------CCEEEEEECCc-E-EEEEEEEEEEEECCc--------ee-eEEEEEEEEccccccccCCcceEEECC
Confidence 38999999986 4 899999999999875 25 999999998877522233679999999
Q ss_pred CCCCC------hHHHHHhcCCCC-CceEEeecCCC------CccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeE
Q 009271 258 LGDVS------VPSLLAKAGLIQ-NSFSICFDEND------SGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVES 320 (538)
Q Consensus 258 ~~~~S------l~sqL~~~g~i~-~~FS~cl~~~~------~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~ 320 (538)
+..++ ++.+|+++|+|. ++||+||.++. .|.|+||++|+.++. |+|+.. ..+|.|.+++
T Consensus 132 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~ 207 (341)
T 3k1w_A 132 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKG 207 (341)
T ss_dssp CGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECC
T ss_pred chhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeE
Confidence 98764 789999999996 99999998764 799999999998763 788752 3789999999
Q ss_pred EEECCeEee-cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 321 YCIGNSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 321 i~Vgg~~l~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
|.||++.+. .....+||||||++++||+++|++|.+++..... ... |.++|.....+|+|+|+| ||.
T Consensus 208 i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~~g-----~~~~C~~~~~~p~i~f~f-~g~ 275 (341)
T 3k1w_A 208 VSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR------LFD-----YVVKCNEGPTLPDISFHL-GGK 275 (341)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC------SSC-----EEEEGGGGGGCCCEEEEE-TTE
T ss_pred EEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec------CCC-----eEEeCCCCCcCCcEEEEE-CCE
Confidence 999999753 3567899999999999999999999988754321 111 455665556789999999 679
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEec-----CCCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMST-----DGDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++.|++++|++.........|+ +|+.. ..+.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 276 EYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999999999876543367996 67763 24589999999999999999999999999975
|
| >3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-53 Score=439.03 Aligned_cols=303 Identities=19% Similarity=0.288 Sum_probs=245.1
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
.+.+..|+++|.||||+|+|.|+|||||+++||+|. |..|..+ ..+.|+|++|+|++.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~----------~~~~y~~~~SsT~~~~~--------- 71 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT----------GHAIYTPSKSSTSKKVS--------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT----------TSCCBCGGGCTTCEECT---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC----------CCCcCCcccCcCceEcC---------
Confidence 456778999999999999999999999999999998 8776422 34799999999999763
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S 262 (538)
.|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++.+++.|......|||||||+..++
T Consensus 72 --------~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 134 (329)
T 3c9x_A 72 --------GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGN 134 (329)
T ss_dssp --------TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGC
T ss_pred --------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccccCCCceeEEeCccccc
Confidence 48999999996 67899999999999864 36789999999987766433367999999987644
Q ss_pred ---------hHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEee
Q 009271 263 ---------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCLT 329 (538)
Q Consensus 263 ---------l~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~ 329 (538)
++++|+++ +-+++||+||.++..|.|+||++|+.++ .|+|++.. ..+|.|.|++|.||++.+.
T Consensus 135 ~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~ 210 (329)
T 3c9x_A 135 QVRPHPQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLN 210 (329)
T ss_dssp CCBSSCCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCC
T ss_pred ccCCCCCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEecc
Confidence 67788875 3359999999987789999999998765 48898642 3689999999999999887
Q ss_pred cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeE
Q 009271 330 QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFS 409 (538)
Q Consensus 330 ~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~ 409 (538)
...+.+||||||++++||+++|++|.+++..... ..........|+ ..+|+|+|+| +|.++.|++++|+
T Consensus 211 ~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~---~~~~~~~~~~C~-------~~~P~i~f~f-~g~~~~ip~~~~~ 279 (329)
T 3c9x_A 211 RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY---DNQQEGVVFDCD-------EDLPSFSFGV-GSSTITIPGDLLN 279 (329)
T ss_dssp SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE---ETTTTEEEEETT-------CCCCCEEEEE-TTEEEEECGGGGE
T ss_pred CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE---cCCCCEEEEECC-------CCCCcEEEEE-CCEEEEECHHHee
Confidence 6678899999999999999999999866532211 111111112455 3689999999 5799999999998
Q ss_pred EeecCCcceEEEE-EEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 410 FPENEGFTVFCLT-VMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 410 ~~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
+...+.....|++ |+..+ .+.||||+.|||++|+|||++++|||||+.
T Consensus 280 ~~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 280 LTPLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eeccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 8753322479975 67654 458999999999999999999999999973
|
| >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-53 Score=439.62 Aligned_cols=298 Identities=23% Similarity=0.415 Sum_probs=246.2
Q ss_pred eeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCC--CCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQ--CAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 101 ~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~--C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
++. +.+..||++|.||||+|+|.|++||||+++||+|. |.. |.. ++.|+|++|+|++...
T Consensus 6 ~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~---- 68 (329)
T 1htr_B 6 PMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS------------HSRFNPSESSTYSTNG---- 68 (329)
T ss_dssp GGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT------------SCCBCGGGCTTCEEEE----
T ss_pred eeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC------------CCcCCCccCCCeEECC----
Confidence 344 66778999999999999999999999999999998 753 543 3689999999999763
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+.+.++.....|||||||
T Consensus 69 --------------~~~~i~Yg~g-s-~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 124 (329)
T 1htr_B 69 --------------QTFSLQYGSG-S-LTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLA 124 (329)
T ss_dssp --------------EEEEEEETTE-E-EEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGGGCSCCEEEECC
T ss_pred --------------cEEEEEeCCC-C-eEEEEEeeeEEEcce--------EECceEEEEEEEccccccccCCCceEEecC
Confidence 8999999996 4 599999999999864 367899999998877543334679999999
Q ss_pred CCCC------ChHHHHHhcCCCC-CceEEeecCCC---CccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEE
Q 009271 258 LGDV------SVPSLLAKAGLIQ-NSFSICFDEND---SGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCI 323 (538)
Q Consensus 258 ~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~~---~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~V 323 (538)
+..+ +++++|+++|+|. ++||+||.++. .|.|+||++|+.++ .|+|++. ..+|.|.+++|.|
T Consensus 125 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 200 (329)
T 1htr_B 125 YPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLI 200 (329)
T ss_dssp CCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEE
T ss_pred CCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEE
Confidence 9875 4788999999996 99999998763 79999999998865 3888853 3689999999999
Q ss_pred CCeEee--cCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeee
Q 009271 324 GNSCLT--QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSF 401 (538)
Q Consensus 324 gg~~l~--~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~ 401 (538)
|++.+. .....+||||||++++||+++|++|.+++.+... ........|+. ...+|+|+|+| ||.++
T Consensus 201 ~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~-----~~~~P~i~f~f-~g~~~ 269 (329)
T 1htr_B 201 GGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNS-----IQNLPSLTFII-NGVEF 269 (329)
T ss_dssp TTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGG-----GGGSCCEEEEE-TTEEE
T ss_pred CCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCC-----cccCCcEEEEE-CCEEE
Confidence 998864 3567899999999999999999999988754321 11112234554 35789999999 67999
Q ss_pred eeecceeEEeecCCcceEEE-EEEecC-----CC-ceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 402 VVRNHIFSFPENEGFTVFCL-TVMSTD-----GD-YGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 402 ~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~-~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
.|++++|++... + .|+ +|+..+ ++ .||||+.||+++|+|||++++|||||+++
T Consensus 270 ~i~~~~y~~~~~---g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 270 PLPPSSYILSNN---G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECHHHHEEECS---S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhcccCC---C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 999999998864 3 896 687653 34 79999999999999999999999999864
|
| >2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-53 Score=445.87 Aligned_cols=322 Identities=17% Similarity=0.217 Sum_probs=255.2
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
+..+..||++|.||||+|+|.|+|||||+++||+|. |..| ++.|+|++|+|++.+.
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~y~~~~SsT~~~~~--------- 73 (395)
T 2qp8_A 17 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--------------HRYYQRQLSSTYRDLR--------- 73 (395)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--------------SCCCCGGGCTTCEEEE---------
T ss_pred CCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--------------cCCcCcccCCCceeCC---------
Confidence 445678999999999999999999999999999997 7544 3689999999999764
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC-
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV- 261 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~- 261 (538)
|.|.+.|++| + ++|.+++|+|+|++.. .+...+.|+|.....+.|......|||||||+..+
T Consensus 74 ---------~~~~i~Yg~G-s-~~G~~~~Dtv~ig~g~------~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s 136 (395)
T 2qp8_A 74 ---------KGVYVPYTQG-K-WEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIA 136 (395)
T ss_dssp ---------EEEEEECSSC-E-EEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGC
T ss_pred ---------ceEEEEECCc-E-EEEEEEeEEEEECCCC------CceEEEEEEEEEccCcccccccCccceEEcCchhhc
Confidence 8899999996 4 5899999999998421 12234778888877666644346799999998765
Q ss_pred -------ChHHHHHhcCCCCCceEEeecC------------CCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeE
Q 009271 262 -------SVPSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGV 318 (538)
Q Consensus 262 -------Sl~sqL~~~g~i~~~FS~cl~~------------~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l 318 (538)
+++.+|+++++|+++||+||.+ ...|.|+||++|+.++ .|+|++. ..+|.|.|
T Consensus 137 ~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l 212 (395)
T 2qp8_A 137 RPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVII 212 (395)
T ss_dssp SSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCE
T ss_pred cCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEE
Confidence 4667999999998999999964 2579999999998765 3788854 36899999
Q ss_pred eEEEECCeEeec-----CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccc--cccccccccccccccccCccE
Q 009271 319 ESYCIGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDM 391 (538)
Q Consensus 319 ~~i~Vgg~~l~~-----~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i 391 (538)
++|.||++.+.. ....+||||||++++||+++|++|.++|.+.......... ......|+.........+|+|
T Consensus 213 ~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 292 (395)
T 2qp8_A 213 VRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVI 292 (395)
T ss_dssp EEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCE
T ss_pred EEEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcE
Confidence 999999998753 1357999999999999999999999999876543221100 011346887654444579999
Q ss_pred EEEEcCCe-----eeeeecceeEEeecC--CcceEEE--EEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 392 RLIFSKNQ-----SFVVRNHIFSFPENE--GFTVFCL--TVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 392 t~~f~gg~-----~~~v~~~~y~~~~~~--~~~~~Cl--~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
+|+|.|+. ++.+++++|++...+ +....|+ ++.+.+ +.||||+.|||++|+|||++++|||||+++|.+.
T Consensus 293 ~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 293 SLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS-TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 371 (395)
T ss_dssp EEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES-SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred EEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCC-CcEEEChHHhCCeeEEEECCCCEEEEEeccCCCC
Confidence 99997763 689999999987643 1235896 566543 5799999999999999999999999999999976
Q ss_pred cccccccC
Q 009271 463 IDKSHVHL 470 (538)
Q Consensus 463 ~~~~~~~~ 470 (538)
++...++.
T Consensus 372 ~~~~i~~i 379 (395)
T 2qp8_A 372 DEFRTAAV 379 (395)
T ss_dssp CSSCCCEE
T ss_pred CCCcccee
Confidence 66544444
|
| >1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-53 Score=435.78 Aligned_cols=301 Identities=18% Similarity=0.281 Sum_probs=243.9
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 105 ~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
..+..|+++|.||||+|+|.|++||||+++||+|. |..|.. ..+.|+|++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----------~~~~y~~~~SsT~~~~~---------- 70 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-----------XQTIYTPSKSTTAKLLS---------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC------------CCCBCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-----------ccCccCCccCccceecC----------
Confidence 35678999999999999999999999999999998 877743 24689999999999864
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC-
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS- 262 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S- 262 (538)
.|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+.+.|......|||||||+..++
T Consensus 71 -------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 134 (329)
T 1oew_A 71 -------GATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNT 134 (329)
T ss_dssp -------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred -------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccccCCCceEEEeccccccc
Confidence 37899999996 67899999999999874 36889999999987766433367999999987654
Q ss_pred --------hHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEeec
Q 009271 263 --------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (538)
Q Consensus 263 --------l~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~ 330 (538)
++++|+++ +-+++||+||.++..|.|+||++|+.++ .|+|++.. ..+|.|.+++|.||++.+..
T Consensus 135 ~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~ 210 (329)
T 1oew_A 135 VSPTQQKTFFDNAKAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKS 210 (329)
T ss_dssp CBSSCCCCHHHHHTTT-SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEE
T ss_pred cCcCCCCCHHHHHHHh-ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccC
Confidence 66888876 3359999999987789999999998765 48998642 36899999999999988765
Q ss_pred CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEE
Q 009271 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (538)
Q Consensus 331 ~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~ 410 (538)
..+.+||||||++++||+++|++|.+++.... ...........|+ ..+|+|+|+| ||.++.|++++|++
T Consensus 211 ~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~---~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~ip~~~~~~ 279 (329)
T 1oew_A 211 TSIDGIADTGTTLLYLPATVVSAYWAQVSGAK---SSSSVGGYVFPCS-------ATLPSFTFGV-GSARIVIPGDYIDF 279 (329)
T ss_dssp EEEEEEECTTCCSEEECHHHHHHHHTTSTTCE---EETTTTEEEEETT-------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred CCceEEEeCCCCCEECCHHHHHHHHHhCCCcE---EcCCCCEEEEECC-------CCCCcEEEEE-CCEEEEECHHHeee
Confidence 66789999999999999999999987653221 1111111113455 3689999999 78999999999988
Q ss_pred eecCCcceEEEE-EEecC-CCceeEcceeeeeeEEEEeC-CCCEEEEeec
Q 009271 411 PENEGFTVFCLT-VMSTD-GDYGIIGQNFMMGHRIVFDR-ENLKLAWSHS 457 (538)
Q Consensus 411 ~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~-e~~rIGfa~~ 457 (538)
...+.....|++ |+..+ .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 280 ~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 280 GPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EESSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eecCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 753222479975 66654 45899999999999999999 9999999974
|
| >3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-53 Score=435.71 Aligned_cols=292 Identities=21% Similarity=0.355 Sum_probs=244.7
Q ss_pred ccEEEEEEEecCCCeEEEEEEEcCCCceeEe-----cC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCC
Q 009271 107 YWLHYTWIDIGTPNVSFLVALDAGSNLLWVP-----CQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (538)
Q Consensus 107 ~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~-----c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~ 180 (538)
+..||++|.||||||++.|++||||+++||+ |. |..|.. .+.|+|++|+|++.+.
T Consensus 11 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~~------- 71 (339)
T 3fv3_A 11 GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS------------SGTFTPSSSSSYKNLG------- 71 (339)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT------------TCCBCGGGCTTCEEEE-------
T ss_pred CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC------------CCcCCCccCcceeeCC-------
Confidence 5689999999999999999999999999998 44 445542 4699999999999864
Q ss_pred CCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCC
Q 009271 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260 (538)
Q Consensus 181 ~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~ 260 (538)
|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++...+ .+||||||+..
T Consensus 72 -----------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~-------~~GilGLg~~~ 124 (339)
T 3fv3_A 72 -----------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQIADVTQTSV-------DQGILGIGYTS 124 (339)
T ss_dssp -----------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS-------SSCEEECSCGG
T ss_pred -----------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEEEEEEecCC-------CceeEEecCcc
Confidence 8999999996 78999999999999874 368999999998764 48999999876
Q ss_pred CC----------------hHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEe
Q 009271 261 VS----------------VPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVG 317 (538)
Q Consensus 261 ~S----------------l~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~ 317 (538)
++ ++.+|+++|+|+ ++||+||.+. ..|.|+||++|+.++ .++|++.. .+|.|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~ 200 (339)
T 3fv3_A 125 NEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTIS 200 (339)
T ss_dssp GCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEE
T ss_pred ccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC----ccEEEE
Confidence 53 899999999997 9999999875 479999999998865 48888642 589999
Q ss_pred EeEEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcC
Q 009271 318 VESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSK 397 (538)
Q Consensus 318 l~~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~g 397 (538)
+++|.||++.+. ....+||||||++++||+++|++|.+++........ .........|+. ..+|.|+|+|.+
T Consensus 201 l~~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~-~~~~~~~~~C~~------~~~p~i~f~f~~ 272 (339)
T 3fv3_A 201 LASVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVA-RDQYLYFIDCNT------DTSGTTVFNFGN 272 (339)
T ss_dssp EEEEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEE-TTEEEEEECTTC------CCCSEEEEEETT
T ss_pred EEEEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEcccc-ccCceEEEecCC------CCCCcEEEEECC
Confidence 999999999887 346799999999999999999999998875443110 011112234553 357999999976
Q ss_pred CeeeeeecceeEEeecCCcceEE-EEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 398 NQSFVVRNHIFSFPENEGFTVFC-LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 398 g~~~~v~~~~y~~~~~~~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
|.++.|++++|++... ...| ++|++ .+.||||+.|||++|+|||++++|||||+++|++
T Consensus 273 g~~~~v~~~~~~~~~~---~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 273 GAKITVPNTEYVYQNG---DGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp SCEEEEEGGGGEEECS---SSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCEEEECHHHheeeCC---CCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 8999999999998753 3579 78887 3579999999999999999999999999999985
|
| >3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-52 Score=440.04 Aligned_cols=321 Identities=17% Similarity=0.216 Sum_probs=254.5
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 105 ~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
..+..||++|.||||||+|.|+|||||+++||+|. | |. .++.|+|++|+|++...
T Consensus 25 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~------------~~~~y~~~~SsT~~~~~---------- 80 (402)
T 3vf3_A 25 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDLR---------- 80 (402)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc------------ccCCcCcccCcccccCC----------
Confidence 34568999999999999999999999999999997 6 32 13689999999999764
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC--
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV-- 261 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~-- 261 (538)
|.|.+.|++| + +.|.+++|+|+|++.. .+...+.|+|.....+.|......|||||||+..+
T Consensus 81 --------~~~~i~Yg~G-s-~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 81 --------KGVYVPYTQG-K-WEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp --------EEEEEECSSC-E-EEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCS
T ss_pred --------CEEEEEECcE-E-EEEEEEEEEEEECCcc------ccceeeeEEEEEccccccccCCCccceEEcCchhhcc
Confidence 8999999996 4 6999999999998531 12235668998887777655457899999998754
Q ss_pred ------ChHHHHHhcCCCCCceEEeecC------------CCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEe
Q 009271 262 ------SVPSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 262 ------Sl~sqL~~~g~i~~~FS~cl~~------------~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~ 319 (538)
+++.+|+++++|+++||+||.+ ...|.|+||++|+.++. |+|++. ..+|.|.++
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~ 220 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIV 220 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEe
Confidence 5778999999998999999963 24799999999998764 788753 368999999
Q ss_pred EEEECCeEeec-----CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccc--cccccccccccccccccCccEE
Q 009271 320 SYCIGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDMR 392 (538)
Q Consensus 320 ~i~Vgg~~l~~-----~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~it 392 (538)
+|.||++.+.. ....+||||||++++||+++|++|.++|.+.......... ......|+......+..+|+|+
T Consensus 221 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 300 (402)
T 3vf3_A 221 RVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 300 (402)
T ss_dssp EEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEE
T ss_pred EEEECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceE
Confidence 99999998863 2457999999999999999999999999887543222111 1124578876544445799999
Q ss_pred EEEcCCe-----eeeeecceeEEeecCC--cceEEEE--EEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCccc
Q 009271 393 LIFSKNQ-----SFVVRNHIFSFPENEG--FTVFCLT--VMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVI 463 (538)
Q Consensus 393 ~~f~gg~-----~~~v~~~~y~~~~~~~--~~~~Cl~--i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~ 463 (538)
|+|.|+. ++.|++++|++...+. ....|++ +... .+.||||+.||+++|+|||++++|||||+++|.+.+
T Consensus 301 f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 379 (402)
T 3vf3_A 301 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 379 (402)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBC
T ss_pred EEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCccc
Confidence 9997653 5899999999876532 1258975 3333 357999999999999999999999999999999876
Q ss_pred ccccccC
Q 009271 464 DKSHVHL 470 (538)
Q Consensus 464 ~~~~~~~ 470 (538)
+...++.
T Consensus 380 ~~~i~~i 386 (402)
T 3vf3_A 380 EFRTAAV 386 (402)
T ss_dssp SSCBCEE
T ss_pred Ccccccc
Confidence 6544443
|
| >3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-52 Score=445.18 Aligned_cols=321 Identities=17% Similarity=0.212 Sum_probs=257.4
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
+..+..||++|.||||+|+|.|+|||||+++||+|. | |.. .+.|+|++|+||+...
T Consensus 70 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~------------~~~y~~~~SsT~~~~~--------- 126 (455)
T 3lpj_A 70 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL------------HRYYQRQLSSTYRDLR--------- 126 (455)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC------------SCCCCGGGCTTCEEEE---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc------------CCcccCCCCCCcccCC---------
Confidence 345678999999999999999999999999999998 6 422 3689999999999764
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC-
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV- 261 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~- 261 (538)
|.|.+.|++| + +.|.+++|+|+|++.. .+..++.|+|.....+.|......|||||||+..+
T Consensus 127 ---------~~~~i~Yg~G-s-~~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s 189 (455)
T 3lpj_A 127 ---------KGVYVPYTQG-K-WEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIA 189 (455)
T ss_dssp ---------EEEEEECSSC-E-EEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGC
T ss_pred ---------ccEEEEeCCe-E-EEEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccccCCCcceEEEeCccccc
Confidence 8999999996 3 5999999999998531 12335779999888877755457899999998754
Q ss_pred -------ChHHHHHhcCCCCCceEEeecC------------CCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeE
Q 009271 262 -------SVPSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGV 318 (538)
Q Consensus 262 -------Sl~sqL~~~g~i~~~FS~cl~~------------~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l 318 (538)
+++++|+++++|+++||+||.+ ...|.|+||++|+.++. |+|+.. ..+|.|.+
T Consensus 190 ~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l 265 (455)
T 3lpj_A 190 RPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVII 265 (455)
T ss_dssp SSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCE
T ss_pred cccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEE
Confidence 5678999999998999999963 35799999999998763 788754 36899999
Q ss_pred eEEEECCeEeecC-----CceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccc--cccccccccccccccccCccE
Q 009271 319 ESYCIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDM 391 (538)
Q Consensus 319 ~~i~Vgg~~l~~~-----~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i 391 (538)
++|.||++.+... ...+||||||++++||+++|++|.++|.+.....+.... ......|+......+..+|+|
T Consensus 266 ~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i 345 (455)
T 3lpj_A 266 VRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVI 345 (455)
T ss_dssp EEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCE
T ss_pred eEEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcE
Confidence 9999999988632 457999999999999999999999999887643221111 112467888765444569999
Q ss_pred EEEEcCCe-----eeeeecceeEEeecCCc--ceEEEEE--EecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 392 RLIFSKNQ-----SFVVRNHIFSFPENEGF--TVFCLTV--MSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 392 t~~f~gg~-----~~~v~~~~y~~~~~~~~--~~~Cl~i--~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
+|+|.|+. ++.|++++|++...+.. ...|+++ .+. .+.||||+.||+++|+|||++++|||||+++|.+.
T Consensus 346 ~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 424 (455)
T 3lpj_A 346 SLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 424 (455)
T ss_dssp EEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred EEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccccc
Confidence 99997754 58999999998765421 2589763 333 35799999999999999999999999999999887
Q ss_pred ccccccc
Q 009271 463 IDKSHVH 469 (538)
Q Consensus 463 ~~~~~~~ 469 (538)
++...+.
T Consensus 425 ~~~~i~~ 431 (455)
T 3lpj_A 425 DEFRTAA 431 (455)
T ss_dssp CSSCCCE
T ss_pred cccCcce
Confidence 6554433
|
| >1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-53 Score=441.40 Aligned_cols=299 Identities=19% Similarity=0.315 Sum_probs=247.3
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 175 (538)
.+++.|+.+..||++|.||||||+|.|++||||+++||+|. |. .|.. ++.|+|++|+|++...
T Consensus 53 ~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~------------~~~y~~~~SsT~~~~~-- 118 (375)
T 1miq_A 53 VIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI------------KNLYDSSKSKSYEKDG-- 118 (375)
T ss_dssp CCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG------------SCCBCGGGCTTCEEEE--
T ss_pred eEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC------------CCcCCCccCCceEECC--
Confidence 35677788889999999999999999999999999999998 85 4543 4689999999999753
Q ss_pred CCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEe----ecCCCCCCCCCc
Q 009271 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK----QTGSYLDGAAPD 251 (538)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~----~~g~~~~~~~~d 251 (538)
|.|.+.|++| + +.|.+++|+|+|++. ...+ .|||++. +. .|.. ...|
T Consensus 119 ----------------~~~~i~Yg~G-s-~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f~~-~~~d 169 (375)
T 1miq_A 119 ----------------TKVDITYGSG-T-VKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IYSS-VEFD 169 (375)
T ss_dssp ----------------EEEEEEETTE-E-EEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HHHH-SCCC
T ss_pred ----------------cEEEEEeCCC-e-EEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cccc-CCCc
Confidence 8999999996 4 799999999999864 3567 9999998 54 3322 2579
Q ss_pred eEEeeCCCCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeE
Q 009271 252 GVMGLGLGDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGV 318 (538)
Q Consensus 252 GIlGLG~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l 318 (538)
||||||++.+ +++.+|+++|+|. ++||+||.++ ..|.|+|||+|+.++ .|+|++. ..+|.|.+
T Consensus 170 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l 245 (375)
T 1miq_A 170 GILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDL 245 (375)
T ss_dssp EEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEE
T ss_pred eEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEE
Confidence 9999999875 4788999999996 9999999875 479999999998765 3888853 36999999
Q ss_pred eEEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCC
Q 009271 319 ESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKN 398 (538)
Q Consensus 319 ~~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg 398 (538)
+ |.||++.+ ....+||||||++++||+++|++|.+++.+... ...+.....|+. ..+|+|+|+| ||
T Consensus 246 ~-i~v~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~~g~~~~~C~~------~~~P~i~f~f-~g 311 (375)
T 1miq_A 246 D-VHFGKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV----PFLPFYVTTCDN------KEMPTLEFKS-AN 311 (375)
T ss_dssp E-EEETTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC----TTSSCEEEETTC------TTCCCEEEEC-SS
T ss_pred E-EEECCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCccc----CCCCeEEEECCC------CCCCcEEEEE-CC
Confidence 9 99999988 567899999999999999999999988865321 111122334654 4689999999 67
Q ss_pred eeeeeecceeEEeecCCcceEEE-EEEecCC--CceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 399 QSFVVRNHIFSFPENEGFTVFCL-TVMSTDG--DYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 399 ~~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~~--~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
..+.|++++|++...+.....|+ +|++.+. +.||||+.||+++|+|||++++|||||+++
T Consensus 312 ~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 312 NTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp CEEEECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99999999999986532246895 8887763 689999999999999999999999999864
|
| >3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=433.46 Aligned_cols=304 Identities=22% Similarity=0.374 Sum_probs=245.7
Q ss_pred cccEEEEEEEecCCCeEEEEEEEcCCCceeEecC---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 106 ~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
.+..||++|.||||||+|.|++||||+++||+|. |..|..... ...|..++.|+|++|+|++.+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~---~~~C~~~~~y~~~~SsT~~~~~--------- 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQT---ADFCKQKGTYDPSGSSASQDLN--------- 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCC---TTGGGTTCCBCGGGCTTCEEEE---------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccc---cCCCCCCCcCCCccCcceeecC---------
Confidence 3568999999999999999999999999999975 655532210 0123346799999999999864
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCC--
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD-- 260 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~-- 260 (538)
|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++... ..+||||||+..
T Consensus 78 ---------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~-------~~~GilGLg~~~~~ 132 (342)
T 3pvk_A 78 ---------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILGVGYKTNE 132 (342)
T ss_dssp ---------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSCGGGC
T ss_pred ---------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEccC-------CCccEEEecCcccc
Confidence 8999999996 77999999999999874 36889999998764 458999999987
Q ss_pred -----CChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEe
Q 009271 261 -----VSVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCL 328 (538)
Q Consensus 261 -----~Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l 328 (538)
.+++.+|+++|+|. ++||+||.+. ..|.|+||++|+.++ .++|++.. .+|.|.+++|.|+++.+
T Consensus 133 ~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~ 208 (342)
T 3pvk_A 133 AGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSVEVSGKTI 208 (342)
T ss_dssp SSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTEEE
T ss_pred ccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEEEECCEEe
Confidence 47999999999997 9999999864 469999999999875 48888643 58999999999999998
Q ss_pred ecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeeccee
Q 009271 329 TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIF 408 (538)
Q Consensus 329 ~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y 408 (538)
......+||||||++++||+++|++|.+++........ .. ..+|..+|. .+|.|+|+|.+|.++.+++++|
T Consensus 209 ~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~---~~---~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~ 279 (342)
T 3pvk_A 209 NTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS---NG---NSFYEVDCN---LSGDVVFNFSKNAKISVPASEF 279 (342)
T ss_dssp EEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT---TS---CEEEEECSC---CCSEEEEEESTTCEEEEEGGGG
T ss_pred cCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC---CC---ceEEEEecC---CCCceEEEECCCCEEEEcHHHh
Confidence 86667899999999999999999999988865443211 00 124455554 2499999997678999999999
Q ss_pred EEeecCCc---ceEEE-EEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 409 SFPENEGF---TVFCL-TVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 409 ~~~~~~~~---~~~Cl-~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
++...... ...|+ ++... +.||||+.|||++|+|||++++|||||+++|+.
T Consensus 280 ~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 280 AASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp EEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred eeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 98742211 26895 56553 579999999999999999999999999999985
|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-53 Score=454.07 Aligned_cols=315 Identities=24% Similarity=0.392 Sum_probs=251.2
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC---CCCCCccccccccCCCCCCCCCCCCCCCcccc
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI---QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~ 173 (538)
..+++.|+.+..||++|.||||||+|.|+|||||+++||+|. |. .|.. ++.|+|++|+||+..
T Consensus 42 ~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~- 108 (478)
T 1qdm_A 42 DIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL------------HSRYKAGASSTYKKN- 108 (478)
T ss_dssp CSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG------------SCCBCGGGCTTCBCC-
T ss_pred ceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC------------CCCCCcccCCCeeeC-
Confidence 346677888899999999999999999999999999999997 74 4543 368999999999854
Q ss_pred CCCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceE
Q 009271 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGV 253 (538)
Q Consensus 174 C~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGI 253 (538)
.|.|.+.|++| + ++|.+++|+|+|++. ...++.|||++.+.+..+.....|||
T Consensus 109 -----------------~~~~~i~Yg~G-s-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f~~~~~dGI 161 (478)
T 1qdm_A 109 -----------------GKPAAIQYGTG-S-IAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGI 161 (478)
T ss_dssp -----------------CCEEEEEETTE-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEE
T ss_pred -----------------CcEEEEEcCCC-C-eEEEEEEEEEEECCe--------EECCEEEEEEEecCCcccccccccce
Confidence 48999999996 4 899999999999874 36789999999877642222367999
Q ss_pred EeeCCCCCC------hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeE
Q 009271 254 MGLGLGDVS------VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGV 318 (538)
Q Consensus 254 lGLG~~~~S------l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l 318 (538)
||||+..++ +..+|.++|+|+ ++||+||.++ ..|.|+||++|+.++ .|+|+.. ..+|.|.+
T Consensus 162 lGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l 237 (478)
T 1qdm_A 162 LGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDM 237 (478)
T ss_dssp EECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEE
T ss_pred ecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEE
Confidence 999998876 467899999996 9999999874 479999999999876 3888864 36999999
Q ss_pred eEEEECCeEeec--CCceEEEcCCCccccccHHHHHHHHHHHHHhh----------------------ccc-cc------
Q 009271 319 ESYCIGNSCLTQ--SGFQALVDSGASFTFLPTEIYAEVVVKFDKLV----------------------SSK-RI------ 367 (538)
Q Consensus 319 ~~i~Vgg~~l~~--~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~----------------------~~~-~~------ 367 (538)
++|.||++.+.. ....+||||||++++||+++|++|.++|.+.. ... +.
T Consensus 238 ~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~i 317 (478)
T 1qdm_A 238 GDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQV 317 (478)
T ss_dssp CCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHT
T ss_pred eEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccc
Confidence 999999998653 46789999999999999999999998885421 000 00
Q ss_pred -----c-------------c--------------------------------------cccccccccc---------ccc
Q 009271 368 -----S-------------L--------------------------------------QGNSWKYCYN---------ASS 382 (538)
Q Consensus 368 -----~-------------~--------------------------------------~~~~~~~Cy~---------~~~ 382 (538)
. . .....+.|+. ++|
T Consensus 318 glC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C 397 (478)
T 1qdm_A 318 GLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDC 397 (478)
T ss_dssp TCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECG
T ss_pred cccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeec
Confidence 0 0 0001234544 345
Q ss_pred cccccCccEEEEEcCCeeeeeecceeEEeecCCcceEEEE-EEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEee
Q 009271 383 EEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLT-VMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSH 456 (538)
Q Consensus 383 ~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~~~~~~~Cl~-i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~ 456 (538)
+....+|+|+|+| ||..|.+++++|++...++....|++ |+..+ ++.||||+.||++||+|||++|+|||||+
T Consensus 398 ~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~ 476 (478)
T 1qdm_A 398 GSLGSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAK 476 (478)
T ss_dssp GGGTTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ccccccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEe
Confidence 5556799999999 67999999999999865433568964 66432 35899999999999999999999999998
Q ss_pred c
Q 009271 457 S 457 (538)
Q Consensus 457 ~ 457 (538)
+
T Consensus 477 a 477 (478)
T 1qdm_A 477 A 477 (478)
T ss_dssp E
T ss_pred C
Confidence 6
|
| >3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-52 Score=441.63 Aligned_cols=300 Identities=19% Similarity=0.301 Sum_probs=249.5
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-C--CCCCCCccccccccCCCCCCCCCCCCCCCccccC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-C--IQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C--~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C 174 (538)
..+++.|+.+..||++|.||||||++.|++||||+++||+|. | ..|.. ++.|+|++|+|++..
T Consensus 127 ~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~------------~~~ydps~SsT~~~~-- 192 (451)
T 3qvc_A 127 DNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES------------KNHYDSSKSKTYEKD-- 192 (451)
T ss_dssp CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT------------SCCBCGGGCTTCEEE--
T ss_pred CccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC------------CCCCCCCCCcccccC--
Confidence 346777888999999999999999999999999999999998 8 35643 468999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEe----ecCCCCCCCCC
Q 009271 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK----QTGSYLDGAAP 250 (538)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~----~~g~~~~~~~~ 250 (538)
.|.|.+.|++| + +.|.+++|+|+|++. ..+ +.|||++. +.+ |.. ...
T Consensus 193 ----------------~~~f~i~YgdG-s-~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f~~-~~~ 243 (451)
T 3qvc_A 193 ----------------DTPVKLTSKAG-T-ISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-YSE-SDV 243 (451)
T ss_dssp ----------------EEEEEEECSSE-E-EEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-HHH-SCC
T ss_pred ----------------CCEEEEEECCC-E-EEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-ccC-CCC
Confidence 38999999996 4 999999999999875 356 99999998 666 432 257
Q ss_pred ceEEeeCCCCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCce----eeeeeecCCCCceEEEe
Q 009271 251 DGVMGLGLGDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVG 317 (538)
Q Consensus 251 dGIlGLG~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~ 317 (538)
|||||||++.+ +++++|.++|+|+ ++||+||.+. ..|.|+|||+|+.++. |+|+.. ..+|.|.
T Consensus 244 dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~ 319 (451)
T 3qvc_A 244 DGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVD 319 (451)
T ss_dssp CEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEE
T ss_pred CEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEE
Confidence 99999998764 6789999999996 9999999975 3699999999998753 788753 3789999
Q ss_pred EeEEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcC
Q 009271 318 VESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSK 397 (538)
Q Consensus 318 l~~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~g 397 (538)
++ |.||++ ......+||||||++++||+++|++|.+++..... . ...+|..+|. ...+|+|+|+| |
T Consensus 320 l~-I~Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~----~-----~~g~y~v~C~-~~~~P~itf~f-g 385 (451)
T 3qvc_A 320 LD-VHFGNV--SSKKANVILDSATSVITVPTEFFNQFVESASVFKV----P-----FLSLYVTTCG-NTKLPTLEYRS-P 385 (451)
T ss_dssp EE-EEETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC----T-----TSSCEEEETT-CTTCCCEEEEE-T
T ss_pred EE-EEECCc--cCCCceEEEeCCCccccCCHHHHHHHHHHcCCeec----C-----CCCeEEeeCC-cCcCCcEEEEE-C
Confidence 99 999998 33567799999999999999999999876643211 1 1224556666 56789999999 6
Q ss_pred CeeeeeecceeEEeecCCcceEEE-EEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 398 NQSFVVRNHIFSFPENEGFTVFCL-TVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 398 g~~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
|..+.|++++|++...+.....|+ ++++.+ .+.||||++||+++|+|||++++|||||+++
T Consensus 386 g~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 386 NKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp TEEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 799999999999986532357895 677766 4689999999999999999999999999974
|
| >1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-52 Score=425.51 Aligned_cols=299 Identities=18% Similarity=0.244 Sum_probs=245.2
Q ss_pred eeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC--CCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI--QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 101 ~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~--~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
++.|+.+..|+++|.|| +|+|.|++||||+++||+|. |. .|... .++.|+|++| |++..
T Consensus 10 ~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~----------~~~~y~~~~S-T~~~~----- 71 (330)
T 1yg9_A 10 LVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCP----------NLQKYEKLKP-KYISD----- 71 (330)
T ss_dssp CEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGST----------TCCCCCCSSC-EEEEE-----
T ss_pred eeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccc----------ccCccCCCCC-ceEEC-----
Confidence 45577788999999999 89999999999999999998 85 56211 2469999999 99865
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
.|.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+...|.. ...|||||||
T Consensus 72 -------------~~~~~i~Yg~G-s-~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~~~~f~~-~~~~GilGLg 127 (330)
T 1yg9_A 72 -------------GNVQVKFFDTG-S-AVGRGIEDSLTISQL--------TTSQQDIVLADELSQEVCI-LSADVVVGIA 127 (330)
T ss_dssp -------------EEEEEEETTTE-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEEECTHHHH-TTCSEEEECS
T ss_pred -------------CCEEEEEECCc-e-EEEEEEEEEEEECCE--------EEcCeEEEEEEEccccccc-ccCceEEEcC
Confidence 37899999996 4 599999999999864 3688999999988333422 3579999999
Q ss_pred CCCCC-------hHHHHHhcCCCCCceEEeecCC--C--CccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEE
Q 009271 258 LGDVS-------VPSLLAKAGLIQNSFSICFDEN--D--SGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYC 322 (538)
Q Consensus 258 ~~~~S-------l~sqL~~~g~i~~~FS~cl~~~--~--~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~ 322 (538)
+..++ ++++|+++|+|+++||+||.++ . .|.|+||++|+.++. |+|+.. ..+|.|++++|.
T Consensus 128 ~~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~ 203 (330)
T 1yg9_A 128 APGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVK 203 (330)
T ss_dssp CTTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEE
T ss_pred cchhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEE
Confidence 98876 8899999998899999999875 2 799999999998753 888752 369999999999
Q ss_pred ECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccc-cccccccccCccEEEEEcCCeee
Q 009271 323 IGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCY-NASSEEMLKVPDMRLIFSKNQSF 401 (538)
Q Consensus 323 Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy-~~~~~~~~~~P~it~~f~gg~~~ 401 (538)
||++.+......+||||||++++||+++|++|.+++.+... ..+ . ..| .++|.....+|+|+|+| ||.++
T Consensus 204 v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~g-~--~~~~~~~C~~~~~~p~i~f~f-gg~~~ 274 (330)
T 1yg9_A 204 IGDTTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE-----KTT-T--RRICKLDCSKIPSLPDVTFVI-NGRNF 274 (330)
T ss_dssp ETTEEEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE-----ECS-S--CEEEEECGGGGGGSCCEEEEE-TTEEE
T ss_pred ECCEEEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCccc-----CCC-c--eEEEEEECCCccccCcEEEEE-CCEEE
Confidence 99998765667899999999999999999999988854321 111 0 123 44555455789999999 78999
Q ss_pred eeecceeEEeecCCcceEEE-EEEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 402 VVRNHIFSFPENEGFTVFCL-TVMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 402 ~v~~~~y~~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
.|++++|++.. ...|+ +|+... ++.||||+.|||++|+|||++++|||||+++
T Consensus 275 ~l~~~~y~~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 275 NISSQYYIQQN----GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EECHHHHEEEE----TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhcccC----CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99999999876 35896 677643 4589999999999999999999999999864
|
| >1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-51 Score=421.88 Aligned_cols=297 Identities=20% Similarity=0.306 Sum_probs=239.9
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecCCCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C 179 (538)
+++.|+ +..|+++|.||||+|+|.|+|||||+++||+|. +.|+|++|+++.
T Consensus 5 ~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-------------------~~y~~s~Ss~~~--------- 55 (340)
T 1wkr_A 5 VPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-------------------KSYVKTSTSSAT--------- 55 (340)
T ss_dssp EEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-------------------SCCCCCTTCEEE---------
T ss_pred Eeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-------------------CccCCcCCcccc---------
Confidence 445554 568999999999999999999999999999873 479998887553
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCC
Q 009271 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (538)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~ 259 (538)
.|.|.+.|++| + ++|.+++|+|+|++. .+.++.|||++.+.+ |. ..|||||||+.
T Consensus 56 -----------~~~~~i~Yg~G-s-~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~~---~~~GilGLg~~ 110 (340)
T 1wkr_A 56 -----------SDKVSVTYGSG-S-FSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-FD---GVDGILGVGPV 110 (340)
T ss_dssp -----------EEEEEEECSSC-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-CT---TCSEEEECSCG
T ss_pred -----------CceEEEEECCc-E-EEEEEEEEEEEECCE--------EEcceEEEEEEccCC-Cc---CCCcEEECCcc
Confidence 38999999996 4 899999999999874 368999999999876 42 57999999987
Q ss_pred CC--------------ChHHHHHhcCCCC-CceEEeecCC-----CCccEEeCCCCCCCc----eeeeeeecCCCCceEE
Q 009271 260 DV--------------SVPSLLAKAGLIQ-NSFSICFDEN-----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYF 315 (538)
Q Consensus 260 ~~--------------Sl~sqL~~~g~i~-~~FS~cl~~~-----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~ 315 (538)
.+ +++.+|.++|+|+ ++||+||.+. ..|.|+||++|+.++ .|+|++.......+|.
T Consensus 111 ~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~ 190 (340)
T 1wkr_A 111 DLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWG 190 (340)
T ss_dssp GGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSE
T ss_pred ccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEE
Confidence 64 4578999999997 9999999853 469999999998754 4899976543357899
Q ss_pred EeEeEEEECC-eEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEE
Q 009271 316 VGVESYCIGN-SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLI 394 (538)
Q Consensus 316 V~l~~i~Vgg-~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~ 394 (538)
|. ++|.||+ +.+. ....+||||||++++||+++|++|.+++.++... . ..+|.++|.....+|+|+|+
T Consensus 191 v~-~~i~v~~~~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~----~-----~g~~~~~C~~~~~~p~i~f~ 259 (340)
T 1wkr_A 191 IN-QSIRYGSSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVADN----N-----TGLLRLTTAQYANLQSLFFT 259 (340)
T ss_dssp EE-EEEEETTTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEECT----T-----TSSEEECHHHHHTCCCEEEE
T ss_pred EE-eeEEECCCeEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC----C-----CCeEEeeccccccCCcEEEE
Confidence 99 9999998 8876 4568999999999999999999998777543321 1 12445556544578999999
Q ss_pred EcCCeeeeeecceeEEeecC-----CcceEE-EEEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 395 FSKNQSFVVRNHIFSFPENE-----GFTVFC-LTVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 395 f~gg~~~~v~~~~y~~~~~~-----~~~~~C-l~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
| ||..+.+++++|+++... +....| +++.+.. +..||||+.|||++|+|||++++|||||+++|++.
T Consensus 260 f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 260 I-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp E-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred E-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 9 678999999999876431 112467 5676532 23699999999999999999999999999999863
|
| >1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-51 Score=417.21 Aligned_cols=298 Identities=20% Similarity=0.310 Sum_probs=240.0
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 105 ~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
..+..||++|.|| +|+|.|++||||+++||+|. |..|..+ .++.|+|++|+ ++.
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~----------~~~~y~~~~Ss-~~~------------ 65 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT----------GHDLYTPSSSA-TKL------------ 65 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT----------TSCCCBCCSSC-EEC------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC----------CCCCCCchhcC-Ccc------------
Confidence 3567899999999 89999999999999999998 8766321 35799999998 542
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC-
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS- 262 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S- 262 (538)
+.|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++.+.+.|......|||||||+..++
T Consensus 66 ------~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 130 (325)
T 1ibq_A 66 ------SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINT 130 (325)
T ss_dssp ------TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCC
T ss_pred ------CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccccCCCceEEEeCcccccc
Confidence 258999999996 67899999999999864 36889999999987766543467999999997654
Q ss_pred --------hHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEeec
Q 009271 263 --------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (538)
Q Consensus 263 --------l~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~ 330 (538)
+++||.++ +-+++||+||.++..|.|+||++|+.++ .|+|++.. ..+|.|++++|.||++.+..
T Consensus 131 ~~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~ 206 (325)
T 1ibq_A 131 VQPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSSS 206 (325)
T ss_dssp CBSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCBS
T ss_pred cCcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeeccC
Confidence 56899876 3359999999987789999999998764 48898642 36899999999999988865
Q ss_pred CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEE
Q 009271 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (538)
Q Consensus 331 ~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~ 410 (538)
....+||||||++++||+++|++|.+++.... ...........|+ ..+|+|+|+| ||.++.|++++|++
T Consensus 207 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~---~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~~~~~~~ 275 (325)
T 1ibq_A 207 SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ---ESYEAGGYVFSCS-------TDLPDFTVVI-GDYKAVVPGKYINY 275 (325)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHHTTSTTCB---CCSSSSSCEEETT-------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred CCceEEEeCCCCcEeCCHHHHHHHHHhCCCce---EcCcCCeEEEEcC-------CCCCcEEEEE-CCEEEEECHHHhcc
Confidence 67789999999999999999999987763221 1111111112354 3689999999 78999999999988
Q ss_pred eecCCcceEEEE-EEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 411 PENEGFTVFCLT-VMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 411 ~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
...+.....|++ |+..+ .+.||||+.|||++|+|||++++|||||++
T Consensus 276 ~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 276 APVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp EESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred cccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 754311479965 66654 458999999999999999999999999986
|
| >1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-50 Score=411.74 Aligned_cols=295 Identities=20% Similarity=0.295 Sum_probs=238.0
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 105 ~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
..+..||++|.|| ||+|.|+|||||+++||+|. |..|... .++.|+|++|+ ++.
T Consensus 12 ~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~----------~~~~y~~~~Ss-~~~------------ 66 (323)
T 1izd_A 12 SNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS----------GHDYYTPGSSA-QKI------------ 66 (323)
T ss_dssp GGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT----------TCCCBCCCTTC-EEE------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc----------CCCCCCccccC-Ccc------------
Confidence 3567899999999 79999999999999999998 8766321 34789999998 542
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC-
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS- 262 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S- 262 (538)
+.|.|.+.|++| +.+.|.+++|+|+|++. ...++.|||++.+.+.|......|||||||+..++
T Consensus 67 ------~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 131 (323)
T 1izd_A 67 ------DGATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINT 131 (323)
T ss_dssp ------EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred ------CCCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccccCCCceEEecCcccccc
Confidence 248999999996 67899999999999864 36889999999987766433367999999997654
Q ss_pred --------hHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECCeEeec
Q 009271 263 --------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (538)
Q Consensus 263 --------l~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~ 330 (538)
++++|.++ +-+++||+||.++..|.|+||++|+.++. |+|++.. ..+|.|++++|.||+ .+..
T Consensus 132 ~~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~~ 206 (323)
T 1izd_A 132 VQPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSSS 206 (323)
T ss_dssp CBSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEEC
T ss_pred cCCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-cccC
Confidence 56889876 43599999999877899999999998753 8888532 368999999999999 6665
Q ss_pred CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEE
Q 009271 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (538)
Q Consensus 331 ~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~ 410 (538)
....+||||||++++||+++|++|.+++.... ...... .|..+|. ..+|+|+|+| ||.++.|++++|++
T Consensus 207 ~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~---~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~ 275 (323)
T 1izd_A 207 DSITGIADTGTTLLLLDDSIVDAYYEQVNGAS---YDSSQG-----GYVFPSS--ASLPDFSVTI-GDYTATVPGEYISF 275 (323)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHHTTSTTCE---EETTTT-----EEEEETT--CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred CCceEEEeCCCcceeCCHHHHHHHHHhCCCcE---EcCcCC-----EEEEECC--CCCceEEEEE-CCEEEecCHHHeEE
Confidence 67789999999999999999999987663211 111111 1223343 3689999999 78999999999988
Q ss_pred eecCCcceEEEE-EEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 411 PENEGFTVFCLT-VMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 411 ~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
.... ...|++ |+..+ .+.||||+.|||++|+|||++++|||||++
T Consensus 276 ~~~~--~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 276 ADVG--NGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EECS--TTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ecCC--CCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 7542 578975 77654 458999999999999999999999999985
|
| >1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=413.59 Aligned_cols=295 Identities=18% Similarity=0.317 Sum_probs=236.8
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 105 ~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
..+..||++|.|| ||+|.|++||||+++||+|. |..|... .++.|+|++|+ ++.
T Consensus 12 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~----------~~~~y~~~~Ss-~~~------------ 66 (323)
T 1bxo_A 12 ANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS----------GHSVYNPSATG-KEL------------ 66 (323)
T ss_dssp GGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT----------TSCCBCHHHHC-EEE------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc----------CCCCCCcccCC-ccc------------
Confidence 3567899999999 89999999999999999998 8766322 35799999998 553
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC--
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV-- 261 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~-- 261 (538)
+.|.|.+.|++| +.++|.+++|+|+|++. ...++.|||++.+++.|......|||||||+..+
T Consensus 67 ------~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 131 (323)
T 1bxo_A 67 ------SGYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINT 131 (323)
T ss_dssp ------EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCC
T ss_pred ------CCCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCcccccc
Confidence 248999999996 67899999999999874 3688999999998776654346799999998754
Q ss_pred -------ChHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECCeEeec
Q 009271 262 -------SVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (538)
Q Consensus 262 -------Sl~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~ 330 (538)
+++++|+++ +-+++||+||.++..|.|+||++|+.++ .|+|++.. ..+|.|++++|.||+ +..
T Consensus 132 ~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~~ 205 (323)
T 1bxo_A 132 VQPQSQTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QSG 205 (323)
T ss_dssp CBSSCCCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EEE
T ss_pred cccCCCCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--ccC
Confidence 367889876 3349999999987789999999998764 48898642 368999999999999 444
Q ss_pred CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEE
Q 009271 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (538)
Q Consensus 331 ~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~ 410 (538)
....+||||||++++||+++|++|.+++.... ...........|+ ..+|+|+|+| ||.++.|++++|++
T Consensus 206 ~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~---~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~l~~~~~~~ 274 (323)
T 1bxo_A 206 DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ---QDSNAGGYVFDCS-------TNLPDFSVSI-SGYTATVPGSLINY 274 (323)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHTTSTTCE---EETTTTEEEECTT-------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred CCceEEEeCCCCceeCCHHHHHHHHHhCCCce---EcCcCCEEEEECC-------CCCceEEEEE-CCEEEEECHHHeEE
Confidence 56789999999999999999999987763221 1111111112354 3689999999 78999999999988
Q ss_pred eecCCcceEEEE-EEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 411 PENEGFTVFCLT-VMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 411 ~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
....+ ...|+. |+..+ .+.||||+.|||++|+|||++|+|||||++
T Consensus 275 ~~~~~-~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 275 GPSGD-GSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp EECSS-SSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred eccCC-CCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 76432 478965 77654 458999999999999999999999999986
|
| >1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=333.05 Aligned_cols=219 Identities=26% Similarity=0.389 Sum_probs=185.5
Q ss_pred CceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC---CCCCCccccccccCCCCCCCCCCCCCCCccc
Q 009271 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI---QCAPLSASYYTSLDRNLSEYDPSSSSSSKNV 172 (538)
Q Consensus 97 ~~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~ 172 (538)
+..+++.|+.+..||++|.||||+|+|.|+|||||+++||+|. |. .|.. ++.|+|++|+|++..
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~------------~~~y~~~~SsT~~~~ 69 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA------------HSMYESSDSSTYKEN 69 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT------------SCCBCGGGCTTCEEE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC------------CCCCCCccCCCeeeC
Confidence 4457788889999999999999999999999999999999997 75 4543 368999999999975
Q ss_pred cCCCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCce
Q 009271 173 SCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDG 252 (538)
Q Consensus 173 ~C~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dG 252 (538)
. |.|.+.|++| + +.|.+++|+|+|++. ...++.|||++.+.+..+.....||
T Consensus 70 ~------------------~~~~i~Yg~G-s-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~~~~~G 121 (239)
T 1b5f_A 70 G------------------TFGAIIYGTG-S-ITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLHRLFDG 121 (239)
T ss_dssp E------------------EEEEEECSSC-E-EEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTTCSCCE
T ss_pred C------------------cEEEEEECCC-c-EEEEEEEEEEEECCc--------EEccEEEEEEEeccCccccccCcce
Confidence 3 7899999996 4 789999999999864 3678999999987663222236799
Q ss_pred EEeeCCCCCC--hHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEE
Q 009271 253 VMGLGLGDVS--VPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESY 321 (538)
Q Consensus 253 IlGLG~~~~S--l~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i 321 (538)
|||||+..++ +..+|+++|+|. ++||+||.++ ..|.|+||++|+.++ .|+|++. ..+|.|.|++|
T Consensus 122 ilGLg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i 197 (239)
T 1b5f_A 122 ILGLSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDV 197 (239)
T ss_dssp EEECSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCE
T ss_pred EEecCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEE
Confidence 9999999987 556799999986 9999999863 579999999998865 3888864 26899999999
Q ss_pred EECCeEee--cCCceEEEcCCCccccccHHHHHHHHHHHH
Q 009271 322 CIGNSCLT--QSGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (538)
Q Consensus 322 ~Vgg~~l~--~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~ 359 (538)
.||++.+. .....+||||||++++||+++|++|.++|.
T Consensus 198 ~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 198 LIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred EECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 99999875 245689999999999999999999998764
|
| >1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-36 Score=292.84 Aligned_cols=216 Identities=20% Similarity=0.352 Sum_probs=174.7
Q ss_pred ccccEEEEEEEeecCCCCCCCCCceEEeeCCCCC------ChHHHHHhcCCCC-CceEEeecCCC----CccEEeCCCCC
Q 009271 228 VQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDV------SVPSLLAKAGLIQ-NSFSICFDEND----SGSVFFGDQGP 296 (538)
Q Consensus 228 ~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~~----~G~l~fG~~d~ 296 (538)
.++++.|||++.+.+.+......|||||||++.+ +++++|+++|+|. ++||+||.+.. .|.|+||++|+
T Consensus 4 ~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~ 83 (241)
T 1lya_B 4 KVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDS 83 (241)
T ss_dssp EEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCG
T ss_pred EECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcCH
Confidence 4689999999998886544447899999999875 4678999999996 99999998752 79999999999
Q ss_pred CCce----eeeeeecCCCCceEEEeEeEEEECCeEe-ecCCceEEEcCCCccccccHHHHHHHHHHHHHhhccccccccc
Q 009271 297 ATQQ----STSFLPIGEKYDAYFVGVESYCIGNSCL-TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQG 371 (538)
Q Consensus 297 ~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg~~l-~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~ 371 (538)
.++. |+|++. ..+|.|++++|+|+++.+ ......+||||||++++||+++|++|.+++.+... ...
T Consensus 84 ~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~g 154 (241)
T 1lya_B 84 KYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL-----IQG 154 (241)
T ss_dssp GGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----ETT
T ss_pred HHcCCceEEEECcc----ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec-----cCC
Confidence 8753 788753 378999999999999874 33567899999999999999999999988754321 111
Q ss_pred ccccccccccccccccCccEEEEEcCCeeeeeecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEE
Q 009271 372 NSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVF 445 (538)
Q Consensus 372 ~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVF 445 (538)
.|..+|.....+|+|+|+| ||.++.|++++|++...+.....|+ +|+..+ .+.||||++||+++|+||
T Consensus 155 -----~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vf 228 (241)
T 1lya_B 155 -----EYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVF 228 (241)
T ss_dssp -----EEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEE
T ss_pred -----cEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEE
Confidence 2333444445789999999 7799999999999987543246896 687752 458999999999999999
Q ss_pred eCCCCEEEEeecC
Q 009271 446 DRENLKLAWSHSK 458 (538)
Q Consensus 446 D~e~~rIGfa~~~ 458 (538)
|++++|||||+++
T Consensus 229 D~~~~~igfA~~~ 241 (241)
T 1lya_B 229 DRDNNRVGFAEAA 241 (241)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCEEEEEEcC
Confidence 9999999999863
|
| >1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-22 Score=166.38 Aligned_cols=88 Identities=31% Similarity=0.508 Sum_probs=77.6
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CC----CCCCCccccccccCCCCCCCCCCCCCCCcccc
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI----QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~----~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~ 173 (538)
.+++.|+.+..||++|.||||||+|.|+|||||+++||+|. |. .|.. ++.|+|++|+|++...
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~------------~~~y~p~~SsT~~~~~ 71 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI------------HHKYNSDKSSTYVKNG 71 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT------------SCCBCGGGCTTCEEEE
T ss_pred eEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC------------CCCCCchhCCCceeCC
Confidence 46677888899999999999999999999999999999998 75 4543 4689999999999763
Q ss_pred CCCCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEecc
Q 009271 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218 (538)
Q Consensus 174 C~~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~ 218 (538)
|.|.+.|++| + +.|.+++|+|+|++
T Consensus 72 ------------------~~~~i~Yg~G-s-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------------------TSFDIHYGSG-S-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------------------EEEEEECSSC-E-EEEEEEEEEEEESC
T ss_pred ------------------CcEEEEECCc-E-EEEEEEEEEEEECC
Confidence 8999999996 4 89999999999975
|
| >1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-15 Score=125.31 Aligned_cols=79 Identities=18% Similarity=0.349 Sum_probs=64.7
Q ss_pred cccccccccCccEEEEEcCCeeeeeecceeEEeecCCcceEEE-EEEec----CCCceeEcceeeeeeEEEEeCCCCEEE
Q 009271 379 NASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCL-TVMST----DGDYGIIGQNFMMGHRIVFDRENLKLA 453 (538)
Q Consensus 379 ~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~~~~~~~Cl-~i~~~----~~~~~IlG~~fl~~~yvVFD~e~~rIG 453 (538)
.++|+....+|+|+|+| ||.++.+++++|++...++....|+ +|+.. .++.||||+.||+++|+|||++++|||
T Consensus 4 ~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riG 82 (87)
T 1b5f_B 4 QVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVG 82 (87)
T ss_dssp EECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEE
Confidence 44555556789999999 7799999999999886543246896 67764 235899999999999999999999999
Q ss_pred EeecC
Q 009271 454 WSHSK 458 (538)
Q Consensus 454 fa~~~ 458 (538)
||+++
T Consensus 83 fA~~~ 87 (87)
T 1b5f_B 83 FAEAA 87 (87)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99863
|
| >3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.85 E-value=0.22 Score=44.07 Aligned_cols=112 Identities=15% Similarity=0.233 Sum_probs=62.9
Q ss_pred eEEEeEeEEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEE
Q 009271 313 AYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392 (538)
Q Consensus 313 ~y~V~l~~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it 392 (538)
.++|++ .|+|+.+. ++||||.+.+.++.+..+++- +..... .+......... .. .....++...
T Consensus 24 ~l~v~~---~Ing~~v~-----~LVDTGAs~s~Is~~~A~rlG--L~~~~~-~~~~~~a~g~G---~~--~~~g~v~~~~ 87 (148)
T 3s8i_A 24 MLYINC---KVNGHPLK-----AFVDSGAQMTIMSQACAERCN--IMRLVD-RRWAGVAKGVG---TQ--RIIGRVHLAQ 87 (148)
T ss_dssp CCEEEE---EETTEEEE-----EEECTTCSSCEEEHHHHHHTT--CGGGEE-GGGCEECCC------C--EEEEEEEEEE
T ss_pred EEEEEE---EECCEEEE-----EEEeCCCCcEeeCHHHHHHcC--CccccC-cceeEEEEcCC---cc--EEEEEEEEEE
Confidence 444444 47888776 899999999999998877662 000000 00000000000 00 0001123344
Q ss_pred EEEcCCeeeeeecceeEEeecCCcceEE-EEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 393 LIFSKNQSFVVRNHIFSFPENEGFTVFC-LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 393 ~~f~gg~~~~v~~~~y~~~~~~~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
+++ |+..+ .| +.+.+......|||..+|+.+-.+.|.++++|-|.+.+
T Consensus 88 I~I-g~~~~-----------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~~ 136 (148)
T 3s8i_A 88 IQI-EGDFL-----------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTG 136 (148)
T ss_dssp EEE-TTEEE-----------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTTC
T ss_pred EEE-CCEEE-----------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccCC
Confidence 444 33321 23 23333332358999999999999999999999997643
|
| >2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.62 E-value=0.48 Score=41.45 Aligned_cols=103 Identities=19% Similarity=0.227 Sum_probs=57.6
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccc--cccccccccccccccccccCccEEEEEcC
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRIS--LQGNSWKYCYNASSEEMLKVPDMRLIFSK 397 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~--~~~~~~~~Cy~~~~~~~~~~P~it~~f~g 397 (538)
.+.|+|+.+. ++||||.+.+.++.+..+++- +.. ....+.. ..+..-..+ ........+.+ |
T Consensus 30 ~v~InG~~~~-----~LvDTGAs~s~is~~~a~~lg--l~~-~~~~~~~~~a~g~g~~~~-------~~~~~~~~i~i-g 93 (148)
T 2i1a_A 30 NIEINNYPVK-----AFVDTGAQTTIMSTRLAKKTG--LSR-MIDKRFIGEARGVGTGKI-------IGRIHQAQVKI-E 93 (148)
T ss_dssp EEEETTEEEE-----EEECTTCSSCEEEHHHHHHHT--GGG-GCBCCCC------------------CEEEEEEEEEE-T
T ss_pred EEEECCEEEE-----EEEECCCCccccCHHHHHHcC--CCc-cCCcceEEEEecCCCccc-------ccEEEEEEEEE-C
Confidence 3678888666 899999999999988766542 000 0011110 000000000 00112234445 4
Q ss_pred CeeeeeecceeEEeecCCcceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEe
Q 009271 398 NQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWS 455 (538)
Q Consensus 398 g~~~~v~~~~y~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa 455 (538)
+..+.+ .. .+.+ .+...|||..||+.+.++.|.++++|-|.
T Consensus 94 ~~~~~~--~~--------------~vl~-~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 94 TQYIPC--SF--------------TVLD-TDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp TEEEEE--EE--------------EEEC-SSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CEEece--eE--------------EEec-CCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 443221 11 1222 12248999999999999999999999996
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 538 | ||||
| d1t6ex_ | 381 | b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr | 1e-39 | |
| g1lya.1 | 338 | b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) | 7e-31 | |
| d1eaga_ | 342 | b.50.1.2 (A:) Acid protease {Yeast (Candida albica | 3e-29 | |
| d1dpja_ | 329 | b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha | 8e-29 | |
| d2qp8a1 | 387 | b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum | 1e-27 | |
| d3cmsa_ | 323 | b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos | 3e-27 | |
| d1j71a_ | 334 | b.50.1.2 (A:) Acid protease {Yeast (Candida tropic | 4e-27 | |
| d3psga_ | 370 | b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI | 2e-26 | |
| d1miqa_ | 373 | b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e | 2e-26 | |
| d2apra_ | 325 | b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus | 5e-26 | |
| g1b5f.1 | 326 | b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin | 5e-26 | |
| d1mppa_ | 357 | b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] | 9e-26 | |
| d1smra_ | 335 | b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu | 1e-25 | |
| d1am5a_ | 324 | b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo | 1e-25 | |
| g1htr.1 | 372 | b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens | 4e-25 | |
| d1qdma2 | 337 | b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase | 6e-25 | |
| d1oewa_ | 330 | b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung | 8e-25 | |
| d1izea_ | 323 | b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o | 7e-24 | |
| d2bjua1 | 329 | b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad | 6e-23 | |
| d1hrna_ | 337 | b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho | 2e-22 | |
| d1bxoa_ | 323 | b.50.1.2 (A:) Acid protease {Fungus (Penicillium j | 2e-21 | |
| d1wkra_ | 340 | b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo | 2e-16 |
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Score = 145 bits (367), Expect = 1e-39
Identities = 62/379 (16%), Positives = 117/379 (30%), Gaps = 49/379 (12%)
Query: 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSS 167
L+ G + LD L+W C A + S ++
Sbjct: 15 LYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIP----------CSSPTCLLAN 59
Query: 168 SSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSS 227
+ C P C S PC ++G L + P S
Sbjct: 60 AYPAPGCPAPSCGSDKH----DKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115
Query: 228 VQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSG 287
V V+ C + + L + GV GL +++P+ +A A + N F +C G
Sbjct: 116 VNVGVLAACAPSKLLASLPRGS-TGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPG 174
Query: 288 SVFFGDQGPATQQSTSFLP-----IGEKYDAYFVGVESYCIGNSCL-----TQSGFQALV 337
FG Q T +P A+++ S +G++ + + ++
Sbjct: 175 VAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVML 234
Query: 338 DSGASFTFLPTEIYAEVVVKFDKLVSSK--------RISLQGNSWKYCYNAS----SEEM 385
+ + L ++Y ++ F K ++++ R + CY+ +
Sbjct: 235 STRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGG 294
Query: 386 LKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM------STDGDYGIIGQNFMM 439
VP+++L + + +G M I+G M
Sbjct: 295 YAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQME 354
Query: 440 GHRIVFDRENLKLAWSHSK 458
+ FD E +L +S
Sbjct: 355 DFVLDFDMEKKRLGFSRLP 373
|
| >d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Yeast (Candida albicans) [TaxId: 5476]
Score = 116 bits (290), Expect = 3e-29
Identities = 68/354 (19%), Positives = 121/354 (34%), Gaps = 41/354 (11%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
I +G+ N V +D GS+ LWVP + C + + YDPS SS+S+
Sbjct: 15 AADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQ 74
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
+++ P+ Y +SS G L D + S +
Sbjct: 75 DLN------------------TPFKIGYGD-GSSSQGTLYKDTVGFGGVSIKNQVLADVD 115
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQN---SFSICFDENDSG 287
S I G G G +VP L K G+I S + + +G
Sbjct: 116 STSIDQGILGVG--------YKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATG 167
Query: 288 SVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLP 347
+ FG A + + + S + + L+DSG + T+L
Sbjct: 168 QIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQ 227
Query: 348 TEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV--RN 405
++ +++ F+ ++ + D+ FSKN V
Sbjct: 228 QDLADQIIKAFNGKLTQDSNGNSFYEVDCNLS---------GDVVFNFSKNAKISVPASE 278
Query: 406 HIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459
S ++G ++ D I+G NF+ IV+D ++ +++ + K
Sbjct: 279 FAASLQGDDGQPYDKCQLLFDVNDANILGDNFLRSAYIVYDLDDNEISLAQVKY 332
|
| >d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
Score = 114 bits (286), Expect = 8e-29
Identities = 67/368 (18%), Positives = 114/368 (30%), Gaps = 67/368 (18%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSE 160
+ N Y YT I +GTP +F V LD GS+ LWVP +C A S
Sbjct: 10 YLNAQY---YTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSK---------- 56
Query: 161 YDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFS 220
YD +SSS K S GY+ D L + +
Sbjct: 57 YDHEASSSYKANGTEF--------------------AIQYGTGSLEGYISQDTLSIGDLT 96
Query: 221 KHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS-------LLAKAGLI 273
+ G DG++GLG +SV + + L
Sbjct: 97 IP--------KQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLD 148
Query: 274 QNSFSICF-----DENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCL 328
+ F+ D + G FG + + + + V E +G+
Sbjct: 149 EKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYA 208
Query: 329 TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKV 388
A +D+G S LP+ + + + W Y +
Sbjct: 209 ELESHGAAIDTGTSLITLPSGLAEMINAEIGAK----------KGWTGQYTLDCNTRDNL 258
Query: 389 PDMRLIFSKNQSFVVRNHIFSFPENEG--FTVFCLTVMSTDGDYGIIGQNFMMGHRIVFD 446
PD+ F+ +F + + ++ + + + G I+G F+ + ++D
Sbjct: 259 PDLIFNFN-GYNFTIGPYDYTLEVSGSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYD 317
Query: 447 RENLKLAW 454
N +
Sbjct: 318 LGNNAVGL 325
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: beta-secretase (memapsin) species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 1e-27
Identities = 56/385 (14%), Positives = 119/385 (30%), Gaps = 76/385 (19%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
Y + +G+P + + +D GS+ V Y SS+
Sbjct: 17 YVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRY--------------YQRQLSSTY 62
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
+++ Y+ G L D++ + +V
Sbjct: 63 RDLR------------------KGVYVPYT--QGKWEGELGTDLVSIPHG------PNVT 96
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS--------LLAKAGLIQNSFSICF 281
I + +++G+ +G++GL +++ P L K + N FS+
Sbjct: 97 VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQL 156
Query: 282 ------------DENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGN---- 325
+ GS+ G + + + + Y V + I
Sbjct: 157 CGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLK 216
Query: 326 -SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRI--SLQGNSWKYCYNASS 382
C + +++VDSG + LP +++ V S+++ C+ A +
Sbjct: 217 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT 276
Query: 383 EEMLKVPDMRLIFSKNQSFVV-------RNHIFSFPENEGFTVFCLT-VMSTDGDYGIIG 434
P + L + + ++ + C +S ++G
Sbjct: 277 TPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMG 336
Query: 435 QNFMMGHRIVFDRENLKLAWSHSKC 459
M G +VFDR ++ ++ S C
Sbjct: 337 AVIMEGFYVVFDRARKRIGFAVSAC 361
|
| >d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Chymosin (synonym: renin) species: Cow (Bos taurus) [TaxId: 9913]
Score = 110 bits (274), Expect = 3e-27
Identities = 53/355 (14%), Positives = 104/355 (29%), Gaps = 49/355 (13%)
Query: 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYD 162
N ++ I +GTP F V D GS+ WVP C A + +D
Sbjct: 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQR----------FD 59
Query: 163 PSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKH 222
P SS+ +N+ S G L D + +++
Sbjct: 60 PRKSSTFQNLGKP--------------------LSIHYGTGSMQGILGYDTVTVSNIV-- 97
Query: 223 APQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQN---SFSI 279
Q +V S + + V + L+ S +
Sbjct: 98 DIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYM 157
Query: 280 CFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDS 339
+ +S S ++P+ + F G + G QA++D+
Sbjct: 158 DRNGQESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDT 217
Query: 340 GASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399
G S P+ + + ++ + + +P + + +
Sbjct: 218 GTSKLVGPSSDILNIQQAIGAT----------QNQYGEFDIDCDNLSYMPTVVFEIN-GK 266
Query: 400 SFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAW 454
+ + + +++GF + I+G F+ + VFDR N +
Sbjct: 267 MYPLTPSAY-TSQDQGFCTSGFQSEN-HSQKWILGDVFIREYYSVFDRANNLVGL 319
|
| >d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 109 bits (274), Expect = 4e-27
Identities = 65/352 (18%), Positives = 118/352 (33%), Gaps = 44/352 (12%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
I +G+ V +D GS+ LWV +C + + + +DPSSSSS++
Sbjct: 15 AADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQ 74
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
N++ + +Y TSS G D + S Q + +
Sbjct: 75 NLN------------------QDFSIEYGD-LTSSQGSFYKDTVGFGGISIKNQQFADVT 115
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQN---SFSICFDENDSG 287
+ + G + G +VP L K G+I S + ++ +G
Sbjct: 116 TTSVDQG-------IMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTG 168
Query: 288 SVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLP 347
+ FG A T V + S + ++ ++DSG + T+
Sbjct: 169 KIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST-NADVVLDSGTTITYFS 227
Query: 348 TEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHI 407
KF ++V + S + S D F + V
Sbjct: 228 QSTAD----KFARIVGATWDSRNEIYRLPSCDLS-------GDAVFNFDQGVKITVPLSE 276
Query: 408 FSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459
+++ C +S D I+G NF+ IV+D ++ ++ + K
Sbjct: 277 LILKDSDS--SICYFGIS-RNDANILGDNFLRRAYIVYDLDDKTISLAQVKY 325
|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 108 bits (270), Expect = 2e-26
Identities = 75/403 (18%), Positives = 126/403 (31%), Gaps = 70/403 (17%)
Query: 65 LLSNDWKRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFL 124
L + K K + ++ N ++ I IGTP F
Sbjct: 21 KLKDFLKTHKHNPASKYFPEAAAL--------IGDEPLENYLDTEYFGTIGIGTPAQDFT 72
Query: 125 VALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183
V D GS+ LWVP C A H
Sbjct: 73 VIFDTGSSNLWVPSVYCSSLAC----------------------------SDHNQFNPDD 104
Query: 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGS 243
S Y S +G L D + + S ++ I G + GS
Sbjct: 105 SSTFEATSQELSITYG--TGSMTGILGYDTVQVGGIS--------DTNQIFGLSETEPGS 154
Query: 244 YLDGAAPDGVMGLGLGDVS------VPSLLAKAGLIQN---SFSICFDENDSGSVFFGDQ 294
+L A DG++GL +S V L GL+ S + +++ V G
Sbjct: 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGI 214
Query: 295 GPATQQSTSFLPIGEKYDAYFVGVESYCI-GNSCLTQSGFQALVDSGASFTFLPTEIYAE 353
+ + + + ++S + G + G QA+VD+G S PT A
Sbjct: 215 DSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTSAIAN 274
Query: 354 VVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPEN 413
+ +S G C + S +PD+ + + + ++
Sbjct: 275 IQSDIGASENS-----DGEMVISCSSIDS-----LPDIVFTID-GVQYPLSPSAYILQDD 323
Query: 414 EG--FTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAW 454
+ + V ++ G+ I+G F+ + VFDR N K+
Sbjct: 324 DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGL 366
|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium vivax [TaxId: 5855]
Score = 108 bits (270), Expect = 2e-26
Identities = 53/392 (13%), Positives = 113/392 (28%), Gaps = 49/392 (12%)
Query: 71 KRQKTRVKLQSNNNSSRNQLLFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAG 130
K + +N L ++ + N + Y ++G + F++ D G
Sbjct: 26 NYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMF---YGEGEVGDNHQKFMLIFDTG 82
Query: 131 SNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLK 189
S LWVP +C + YD S S S + +
Sbjct: 83 SANLWVPSKKCNSSGCSIKNL----------YDSSKSKSYEKDGTKVDITYG-------- 124
Query: 190 DPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAA 249
+ G+ D++ L S V + +
Sbjct: 125 ------------SGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSSVEFDGILGL 172
Query: 250 PDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGE 309
+ +G D V L + + F+ +D + + G + + +
Sbjct: 173 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEK 232
Query: 310 KYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISL 369
+ ++ T +VDSG + P+E + + +
Sbjct: 233 LNHDLYWQIDLDVHFGKQ-TMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVP----- 286
Query: 370 QGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCL---TVMST 426
+ + +P + + N ++ + + P E C+ +
Sbjct: 287 FLPFYVTTCDNKE-----MPTLEFKSA-NNTYTLEPEYYMNPILEVDDTLCMITMLPVDI 340
Query: 427 DGDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458
D + I+G FM + VFD + + ++ +K
Sbjct: 341 DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 372
|
| >d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Bread mold (Rhizopus chinensis) [TaxId: 4843]
Score = 106 bits (265), Expect = 5e-26
Identities = 65/358 (18%), Positives = 124/358 (34%), Gaps = 53/358 (14%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSE 160
+GN + Y + IGTP F + D GS+ LW+ C C ++
Sbjct: 11 YGNDIEY--YGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCG-----------SGQTK 57
Query: 161 YDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFS 220
YDP+ SS+ + D + Y + +S+SG L D ++L
Sbjct: 58 YDPNQSSTYQA------------------DGRTWSISY-GDGSSASGILAKDNVNLGGLL 98
Query: 221 KHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSIC 280
+ L G D + + + +L+++ + + F +
Sbjct: 99 IKGQTIELAKREAASFASGPNDGLL-GLGFDTITTVRGVKTPMDNLISQGLISRPIFGVY 157
Query: 281 FDENDSGS----VFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQAL 336
+ +G +F G + S + +PI + + V+ +G S + S F +
Sbjct: 158 LGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVA-SSFDGI 216
Query: 337 VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFS 396
+D+G + LP I A V + + G C ++ + +
Sbjct: 217 LDTGTTLLILPNNIAASVARAYGASDNG-----DGTYTISCDTSAF------KPLVFSIN 265
Query: 397 KNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAW 454
SF V F E +G + + IIG F+ + +VF++ ++
Sbjct: 266 -GASFQVSPDSLVFEEFQG--QCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQI 320
|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin species: Mucor pusillus [TaxId: 4840]
Score = 106 bits (264), Expect = 9e-26
Identities = 67/362 (18%), Positives = 110/362 (30%), Gaps = 34/362 (9%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
F + Y + IGTP F + D GS+ WVP C +
Sbjct: 11 FDLEEY---AIPVSIGTPGQDFYLLFDTGSSDTWVP--HKGCDNSEGCVGKRF------F 59
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
DPSSSS+ K + + Y + + G V +
Sbjct: 60 DPSSSSTFKETDYNLNITYGTGGAN---------GIYFRDSITVGGATVKQQTLAYVDNV 110
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQN-SFSIC 280
P + + +Y D A + G +V L K GLI + FS+
Sbjct: 111 SGPTAEQSPDSELFLDGIFGAAYPDNTAMEA--EYGDTYNTVHVNLYKQGLISSPVFSVY 168
Query: 281 FDENDSGS--VFFGDQGPATQQSTSFLPIGEK---YDAYFVGVESYCIG--NSCLTQSGF 333
+ ND G VF G + + + Y + V I ++
Sbjct: 169 MNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQ 228
Query: 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLK-VPDMR 392
+D+G +F P+ +VV + S QG + S+ V
Sbjct: 229 AFTIDTGTNFFIAPSSFAEKVV---KAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKS 285
Query: 393 LIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKL 452
S V P ++ V+ G+ I+G F+ V+D ++
Sbjct: 286 GSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRI 345
Query: 453 AW 454
+
Sbjct: 346 GF 347
|
| >d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Chymosin (synonym: renin) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 105 bits (262), Expect = 1e-25
Identities = 65/374 (17%), Positives = 123/374 (32%), Gaps = 67/374 (17%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSE 160
+ N Y Y I IGTP +F V D GS LWVP +C + +
Sbjct: 12 YLNSQY---YGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSL-------- 60
Query: 161 YDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFS 220
Y+ S SSS G+L D + + +
Sbjct: 61 YESSDSSSYMENGDDF--------------------TIHYGSGRVKGFLSQDSVTVGGIT 100
Query: 221 KHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV-------PSLLAKAGLI 273
G + A DGV+G+G +V +L++ L
Sbjct: 101 VT---------QTFGEVTQLPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHILSQGVLK 151
Query: 274 QNSFSICFDENDSG---SVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGN-SCLT 329
+ FS+ ++ V G P Q K D++ + ++ +G+ + L
Sbjct: 152 EKVFSVYYNRGPHLLGGEVVLGGSDPQHYQGDFHYVSLSKTDSWQITMKGVSVGSSTLLC 211
Query: 330 QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVP 389
+ G + +VD+G+SF PT ++ + C + +P
Sbjct: 212 EEGCEVVVDTGSSFISAPTSSLKLIMQALG-----AKEKRLHEYVVSCSQVPT-----LP 261
Query: 390 DMRLIF-SKNQSFVVRNHIFSFPENEG----FTVFCLTVMSTDGDYGIIGQNFMMGHRIV 444
D+ + + +++ +P + + + G ++G F+
Sbjct: 262 DISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTE 321
Query: 445 FDRENLKLAWSHSK 458
FDR N ++ ++ ++
Sbjct: 322 FDRHNNRIGFALAR 335
|
| >d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Atlantic cod (Gadus morhua) [TaxId: 8049]
Score = 105 bits (262), Expect = 1e-25
Identities = 63/355 (17%), Positives = 112/355 (31%), Gaps = 60/355 (16%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
Y I IGTP SF V D GS+ LWV C A + + + P SS+
Sbjct: 15 YGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNK----------FKPRQSSTY 64
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
+ L G L D + + S
Sbjct: 65 VETGKTVDLTYGTGGM--------------------RGILGQDTVSVGGGS--------D 96
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS-------VPSLLAKAGLIQNSFSICF- 281
+ +G + + G + A DG++GL ++ ++ +++ + ++ FS
Sbjct: 97 PNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLS 156
Query: 282 -DENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSG 340
+ V G + + + V ++ + G QA+VD+G
Sbjct: 157 GGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAACEGCQAIVDTG 216
Query: 341 ASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIF-SKNQ 399
S P A ++ + QG C + S +PD+ Q
Sbjct: 217 TSKIVAPVSALANIMKDIGASEN------QGEMMGNCASVQS-----LPDITFTINGVKQ 265
Query: 400 SFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAW 454
+I + V S + I G F+ + ++DR N K+ +
Sbjct: 266 PLPPSAYIEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGF 320
|
| >d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plant acid proteinase, phytepsin species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 103 bits (257), Expect = 6e-25
Identities = 74/372 (19%), Positives = 119/372 (31%), Gaps = 69/372 (18%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEY 161
+ N Y + I +GTP F V D GS+ LWVP +C A Y S Y
Sbjct: 12 YMNAQY---FGEIGVGTPPQKFTVIFDTGSSNLWVP--SAKCYFSIACYLHSR------Y 60
Query: 162 DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 221
+SS+ K + S +GY +D + +
Sbjct: 61 KAGASSTYKKNGKPAAIQ--------------------YGTGSIAGYFSEDSVTV----- 95
Query: 222 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS-------LLAKAGLIQ 274
V K+ G A DG++GLG ++SV ++ + +
Sbjct: 96 ---GDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSD 152
Query: 275 NSFSICF----DENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGN--SCL 328
FS DE + G + FG P + + + +G +
Sbjct: 153 PVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGF 212
Query: 329 TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKV 388
G A+ DSG S PT I E+ K S + +
Sbjct: 213 CAGGCAAIADSGTSLLAGPTAIITEINEKIGAA----------GSPMGESAVDCGSLGSM 262
Query: 389 PDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLT------VMSTDGDYGIIGQNFMMGHR 442
PD+ + F ++ + EG C++ + G I+G FM +
Sbjct: 263 PDIEFTIG-GKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYH 321
Query: 443 IVFDRENLKLAW 454
VFD L++ +
Sbjct: 322 TVFDYGKLRIGF 333
|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Fungus (Aspergillus oryzae) [TaxId: 5062]
Score = 100 bits (248), Expect = 7e-24
Identities = 57/354 (16%), Positives = 105/354 (29%), Gaps = 62/354 (17%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
T + +G + D GS LWV Q YY P SS+
Sbjct: 18 ITQVTVGDDT--LGLDFDTGSADLWVFSSQTPSSERSGHDYY----------TPGSSAQK 65
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
+ + Y + +S+SG + D
Sbjct: 66 ID-------------------GATWSISY-GDGSSASGDVYKDK--------VTVGGVSY 97
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS--------LLAKAGLIQNSFSICF 281
S + K + + A DG++GL ++ K+ L + F++
Sbjct: 98 DSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPIFAVAL 157
Query: 282 DENDSGSVFFGDQGPA-TQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSG 340
N G FG + S ++ + + + Y IG+ + + D+G
Sbjct: 158 KHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSDSITGIADTG 216
Query: 341 ASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQS 400
+ L I + + +S + Y S +PD + + +
Sbjct: 217 TTLLLLDDSIVDAYYEQVN--------GASYDSSQGGYVFPS--SASLPDFSVTIG-DYT 265
Query: 401 FVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAW 454
V SF + F ++ + I G F+ +VFD +L +
Sbjct: 266 ATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGF 319
|
| >d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium falciparum, plasmepsin II [TaxId: 5833]
Score = 97.4 bits (241), Expect = 6e-23
Identities = 67/369 (18%), Positives = 114/369 (30%), Gaps = 63/369 (17%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSE 160
F N + Y ++G F LD GS LWVP +C L+
Sbjct: 11 FQNIMF---YGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHL---------- 57
Query: 161 YDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFS 220
YD S S + + + + SG+ D++
Sbjct: 58 YDSSKSRTYEKDGTKVEMN--------------------YVSGTVSGFFSKDLV------ 91
Query: 221 KHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS-------VPSLLAKAGLI 273
S+ I + DG++GLG D+S V L + +
Sbjct: 92 -TVGNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIE 150
Query: 274 QNSFSICFDENDSGSVFFGDQG-PATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSG 332
F+ +D + F G +D Y+ +GN L
Sbjct: 151 NALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLDAHVGNIML--EK 208
Query: 333 FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMR 392
+VDSG S +PT+ +++ D + + N S K+P
Sbjct: 209 ANCIVDSGTSAITVPTDFLNKMLQNLDVIKVP-----FLPFYVTLCNNS-----KLPTFE 258
Query: 393 LIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTD--GDYGIIGQNFMMGHRIVFDRENL 450
+ + + E+ G + L ++ D I+G FM + VFD +N
Sbjct: 259 FTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNH 318
Query: 451 KLAWSHSKC 459
+ + +K
Sbjct: 319 SVGIALAKK 327
|
| >d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Chymosin (synonym: renin) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.2 bits (238), Expect = 2e-22
Identities = 64/378 (16%), Positives = 129/378 (34%), Gaps = 73/378 (19%)
Query: 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSE 160
+ + Y Y I IGTP +F V D GS+ +WVP +C + +
Sbjct: 12 YMDTQY---YGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKL-------- 60
Query: 161 YDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFS 220
+D S SSS K+ + SG+L DI+ + +
Sbjct: 61 FDASDSSSYKHNGTE--------------------LTLRYSTGTVSGFLSQDIITVGGIT 100
Query: 221 KHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV-------PSLLAKAGLI 273
+ + G + A DGV+G+G + ++ +++++ L
Sbjct: 101 ---------VTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLK 151
Query: 274 QNSFSICFDEND------SGSVFFGDQGPATQQST-SFLPIGEKYDAYFVGVESYCIGNS 326
++ FS ++ + G + G P + ++ + + ++
Sbjct: 152 EDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSST 211
Query: 327 CLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEML 386
L + G ALVD+GAS+ T +++ + Y E
Sbjct: 212 LLCEDGCLALVDTGASYISGSTSSIEKLMEALG-----------AKKRLFDYVVKCNEGP 260
Query: 387 KVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCL------TVMSTDGDYGIIGQNFMMG 440
+PD+ + + + + + F E+ C + G +G F+
Sbjct: 261 TLPDISFHLG-GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRK 319
Query: 441 HRIVFDRENLKLAWSHSK 458
FDR N ++ ++ ++
Sbjct: 320 FYTEFDRRNNRIGFALAR 337
|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]
Score = 92.8 bits (229), Expect = 2e-21
Identities = 55/347 (15%), Positives = 112/347 (32%), Gaps = 48/347 (13%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC-QCIQCAPLSASYYTSLDRNLSEYDPSSSSSS 169
T + IG + + D GS LWV + S Y +PS++
Sbjct: 18 ITPVTIGGT--TLNLNFDTGSADLWVFSTELPASQQSGHSVY----------NPSATGKE 65
Query: 170 KNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQ 229
+ + Y +S+SG + D + + + H
Sbjct: 66 LS-------------------GYTWSISYGD-GSSASGNVFTDSVTVGGVTAHGQAVQAA 105
Query: 230 SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSV 289
+ + L G A + + + K+ L Q F++ G
Sbjct: 106 QQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQQPGVY 165
Query: 290 FFGDQGPA-TQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPT 348
FG + S ++ + + V+SY G+ GF + D+G + L
Sbjct: 166 DFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQS--GDGFSGIADTGTTLLLLDD 223
Query: 349 EIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIF 408
+ ++ + ++ +++ S G C +PD + S + V +
Sbjct: 224 SVVSQY---YSQVSGAQQDSNAGGYVFDCST-------NLPDFSVSIS-GYTATVPGSLI 272
Query: 409 SFPENEGFTVFCLTVMSTDG-DYGIIGQNFMMGHRIVFDRENLKLAW 454
++ + + + S G + I G F+ +VFD + +L +
Sbjct: 273 NYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGF 319
|
| >d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]
Score = 78.4 bits (192), Expect = 2e-16
Identities = 61/382 (15%), Positives = 122/382 (31%), Gaps = 97/382 (25%)
Query: 111 YTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSK 170
+ +G+P ++ + +D GS+ W+ Y +S+SS+
Sbjct: 15 VVNVGVGSPATTYSLLVDTGSSNTWLGADK--S-----------------YVKTSTSSAT 55
Query: 171 NVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQS 230
+ S + S SG D + L S +
Sbjct: 56 SDKVS----------------------VTYGSGSFSGTEYTDTVTLGSLT--------IP 85
Query: 231 SVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV---------------PSLLAKAGLIQN 275
IG + +G DG++G+G D++V +L ++ + N
Sbjct: 86 KQSIGVASRDSGF----DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTN 141
Query: 276 SFSICFDENDSGS------VFFGDQGPATQQSTSFLPIGEKYD--AYFVGVESYCIGNSC 327
++ F+ S S F S ++ PI AY+ +S G+S
Sbjct: 142 LLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYGSST 201
Query: 328 LTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLK 387
S +VD+G + T + ++ +A+ K ++ ++ +
Sbjct: 202 SILSSTAGIVDTGTTLTLIASDAFAKYK---------KATGAVADNNTGLLRLTTAQYAN 252
Query: 388 VPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFC-----------LTVMSTDGDYGIIGQN 436
+ + Q+F + + +P N + L S +G I G
Sbjct: 253 LQSLFFTIG-GQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLT 311
Query: 437 FMMGHRIVFDRENLKLAWSHSK 458
F+ V+D N +L + +
Sbjct: 312 FLERFYSVYDTTNKRLGLATTS 333
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| d2apra_ | 325 | Acid protease {Bread mold (Rhizopus chinensis) [Ta | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d1dpja_ | 329 | Acid protease {Baker's yeast (Saccharomyces cerevi | 100.0 | |
| d1j71a_ | 334 | Acid protease {Yeast (Candida tropicalis) [TaxId: | 100.0 | |
| d1am5a_ | 324 | Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: | 100.0 | |
| d1oewa_ | 330 | Endothiapepsin {Chestnut blight fungus (Endothia p | 100.0 | |
| d1smra_ | 335 | Chymosin (synonym: renin) {Mouse (Mus musculus) [T | 100.0 | |
| d1eaga_ | 342 | Acid protease {Yeast (Candida albicans) [TaxId: 54 | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1hrna_ | 337 | Chymosin (synonym: renin) {Human (Homo sapiens) [T | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| g1lya.1 | 338 | Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 100.0 | |
| d1qdma2 | 337 | Plant acid proteinase, phytepsin {Barley (Hordeum | 100.0 | |
| d3cmsa_ | 323 | Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId | 100.0 | |
| g1b5f.1 | 326 | Plant acid proteinase, phytepsin {Cynara carduncul | 100.0 | |
| d2bjua1 | 329 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1wkra_ | 340 | Acid protease {Irpex lacteus (Polyporus tulipifera | 100.0 | |
| d1izea_ | 323 | Acid protease {Fungus (Aspergillus oryzae) [TaxId: | 100.0 | |
| d1bxoa_ | 323 | Acid protease {Fungus (Penicillium janthinellum), | 100.0 |
| >d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Bread mold (Rhizopus chinensis) [TaxId: 4843]
Probab=100.00 E-value=1.6e-51 Score=419.85 Aligned_cols=301 Identities=23% Similarity=0.393 Sum_probs=250.2
Q ss_pred eeeeccc-cccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 99 THFFGNQ-FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 99 ~~~~~~~-~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
++++.++ .+..|+++|.||||||+|.|+|||||+++||+|. |..|..+. +.|+|++|+|++...
T Consensus 5 ~vpl~~~~~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~~C~~c~~~~-----------~~y~~~~SsT~~~~~--- 70 (325)
T d2apra_ 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQ-----------TKYDPNQSSTYQADG--- 70 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTS-----------CCBCGGGCTTCEEEE---
T ss_pred EEEeEecCCCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCCCCCccccCC-----------CccCcccCCceeECC---
Confidence 4565554 3578999999999999999999999999999998 99886543 589999999999753
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|.+.|++| +.+.|.+++|++++++. ...++.|+|.....+.+... ..+||+||
T Consensus 71 ---------------~~~~~~y~~g-~~~~G~~~~D~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~GilGl 125 (325)
T d2apra_ 71 ---------------RTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGL 125 (325)
T ss_dssp ---------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEEC
T ss_pred ---------------eEEEEEeCCC-CeEEEEEEeeeEEeeee--------eccCcceeeeeeeccccccc-ccCccccc
Confidence 8999999996 68999999999999875 35788999998876544332 57999999
Q ss_pred CCCC-------CChHHHHHhcCCCC-CceEEeecCC---CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEE
Q 009271 257 GLGD-------VSVPSLLAKAGLIQ-NSFSICFDEN---DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESY 321 (538)
Q Consensus 257 G~~~-------~Sl~sqL~~~g~i~-~~FS~cl~~~---~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i 321 (538)
|+.. .+++.+|.++|+|. ++||+||.+. ..|.|+||++|..++. ++|+.. ...+|.|.+++|
T Consensus 126 g~~~~~~~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~---~~~~~~v~l~~i 202 (325)
T d2apra_ 126 GFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN---SRGWWGITVDRA 202 (325)
T ss_dssp SCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC---TTSSCEEEECEE
T ss_pred ccccccccccCCcchhHHHhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecC---CCceEEEEEeeE
Confidence 9754 46788999999997 8999999753 4689999999998653 677643 236899999999
Q ss_pred EECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeee
Q 009271 322 CIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSF 401 (538)
Q Consensus 322 ~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~ 401 (538)
.+|+..+. ....+||||||++++||.++|++|.+++..... .+.+|..+|+. ..+|+|+|+| +|.++
T Consensus 203 ~i~~~~~~-~~~~~iiDSGt~~~~lp~~~~~~l~~~~~~~~~----------~~~~~~~~C~~-~~~p~i~f~f-~g~~~ 269 (325)
T d2apra_ 203 TVGTSTVA-SSFDGILDTGTTLLILPNNIAASVARAYGASDN----------GDGTYTISCDT-SAFKPLVFSI-NGASF 269 (325)
T ss_dssp EETTEEEE-CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC----------SSSCEEECSCG-GGCCCEEEEE-TTEEE
T ss_pred EECCEeec-ceeeeeccCCCccccCCHHHHHHHHHHhCCccc----------CCCceeecccC-CCCCcEEEEE-CCEEE
Confidence 99999987 677899999999999999999999987753221 12355566643 3689999999 77999
Q ss_pred eeecceeEEeecCCcceEE-EEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 402 VVRNHIFSFPENEGFTVFC-LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 402 ~v~~~~y~~~~~~~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
.|++++|++...+ ..| ++|+..+.+.+|||++|||++|+|||+|++||||||+
T Consensus 270 ~i~~~~y~~~~~~---~~C~~~i~~~~~~~~iLG~~flr~~y~vfD~~~~~IGfAp~ 323 (325)
T d2apra_ 270 QVSPDSLVFEEFQ---GQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp EECGGGGEEEEET---TEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred EEChHHeEEecCC---CEEEEEEccCCCCCEEECHHHhCcEEEEEECCCCEEeEEEc
Confidence 9999999988753 467 6888887778999999999999999999999999985
|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1e-51 Score=429.12 Aligned_cols=301 Identities=24% Similarity=0.361 Sum_probs=247.3
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 178 (538)
.++.|+.+..||++|.||||||+|.|++||||+++||+|. |..|..+. .+.|||++|+|++...
T Consensus 48 ~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~----------~~~yd~~~Sst~~~~~----- 112 (370)
T d3psga_ 48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSD----------HNQFNPDDSSTFEATS----- 112 (370)
T ss_dssp CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT----------SCCBCGGGCTTCEEEE-----
T ss_pred cccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCccccc----------ccccCCCcccccccCC-----
Confidence 4566888899999999999999999999999999999999 98886443 5789999999999764
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCC
Q 009271 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (538)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~ 258 (538)
|.|.+.|++| ++.|.++.|++.+++. ...++.|||.+...+.+......+||+|||+
T Consensus 113 -------------~~~~~~Yg~G--s~~G~~~~d~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~ 169 (370)
T d3psga_ 113 -------------QELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGLAY 169 (370)
T ss_dssp -------------EEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred -------------CcEEEEeCCc--eEEEEEEEEEEeeece--------eeeeeEEEEEeeccCceeccccccccccccc
Confidence 8899999986 5889999999999875 3678999999998887665557799999998
Q ss_pred CCC------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEECC
Q 009271 259 GDV------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIGN 325 (538)
Q Consensus 259 ~~~------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vgg 325 (538)
... .++.+|.++|+|+ ++||+|+.++ ..|.|+||++|+.++ .|+|+.. ..+|.|.++++.|++
T Consensus 170 ~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~----~~~w~v~~~~i~v~g 245 (370)
T d3psga_ 170 PSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDG 245 (370)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSS
T ss_pred CcccccCCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeecc----cceEEEEEeeEEeCC
Confidence 753 4788999999997 9999999864 568999999998764 4778743 368999999999999
Q ss_pred eEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 326 SCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 326 ~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
+.+.. ....+||||||++++||+++|++|.+++..... ... +|..+|.....+|+|+|+| ||.++.|+
T Consensus 246 ~~~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~-----~~~-----~~~~~C~~~~~~P~l~f~f-~g~~~~l~ 314 (370)
T d3psga_ 246 ETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDG-----EMVISCSSIDSLPDIVFTI-DGVQYPLS 314 (370)
T ss_dssp SEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTC-----CEECCGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred eEEecCCCccEEEecCCceEeCCHHHHHHHHHHhCCeee-----cCC-----cEEEeccccCCCceEEEEE-CCEEEEEC
Confidence 88764 456899999999999999999999977754321 111 2333343345789999999 78999999
Q ss_pred cceeEEeecCCcceEE-EEEEec-----CCCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 405 NHIFSFPENEGFTVFC-LTVMST-----DGDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~C-l~i~~~-----~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
+++|+++.. ..| +++... .++.||||++|||++|+|||+||+||||||.
T Consensus 315 ~~~yi~~~~----~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~ 369 (370)
T d3psga_ 315 PSAYILQDD----DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV 369 (370)
T ss_dssp HHHHEEECS----SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred hHHeEEEcC----CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEec
Confidence 999998754 346 445432 2457999999999999999999999999985
|
| >d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
Probab=100.00 E-value=5.7e-51 Score=415.44 Aligned_cols=304 Identities=22% Similarity=0.355 Sum_probs=252.0
Q ss_pred CceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCC
Q 009271 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (538)
Q Consensus 97 ~~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~ 175 (538)
+..+++.|+.+..|+++|.||||||++.|++||||+++||+|. |..|..+ ..+.|||++|+|++...
T Consensus 2 ~~~vpl~n~~~~~Y~~~i~iGtP~q~~~~~iDTGSs~~Wv~~~~C~~~~c~----------~~~~f~~~~Sst~~~~~-- 69 (329)
T d1dpja_ 2 GHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACF----------LHSKYDHEASSSYKANG-- 69 (329)
T ss_dssp CEEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH----------TSCCBCGGGCTTCEEEE--
T ss_pred CcceEeEEccCCEEEEEEEEeCCCeEEEEEEECCcccEEEECCCCCCcccc----------CCCcCCcccCCceeECC--
Confidence 3457788888999999999999999999999999999999998 8776432 24789999999999754
Q ss_pred CCCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEe
Q 009271 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (538)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (538)
|.|.+.|++| +++|.+++|+++|++. ...++.|+++..+.+........+||+|
T Consensus 70 ----------------~~~~~~y~~g--s~~G~~~~D~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~Gi~G 123 (329)
T d1dpja_ 70 ----------------TEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAFGKFDGILG 123 (329)
T ss_dssp ----------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTTCSCSEEEE
T ss_pred ----------------eeEEEEccCc--eEEEEEEEEEEEecce--------EEeeEEEEEEeeccCccccccccccccc
Confidence 8899999985 5799999999999874 3578899999887765444446799999
Q ss_pred eCCCCCC------hHHHHHhcCCCC-CceEEeecC-----CCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEe
Q 009271 256 LGLGDVS------VPSLLAKAGLIQ-NSFSICFDE-----NDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVE 319 (538)
Q Consensus 256 LG~~~~S------l~sqL~~~g~i~-~~FS~cl~~-----~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~ 319 (538)
||+...+ ...+|..+++|. ++||+||.. ...|.|+||++|..++. ++|+. ...+|.|.++
T Consensus 124 lg~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~----~~~~~~v~~~ 199 (329)
T d1dpja_ 124 LGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR----RKAYWEVKFE 199 (329)
T ss_dssp CSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS----SBTTBEEEEE
T ss_pred cccCccccccCCchhhhHhhccCcccceEEEEEEecCCCcCCCCceECCCCchhhccCceeEeccc----ccceeEEEEe
Confidence 9987644 456789999996 899999964 24589999999998765 55553 2378999999
Q ss_pred EEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 320 SYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 320 ~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
+|.|+++.+......+||||||++++||+++|++|.+++.... ....||..+|.....+|+|+|+| +|.
T Consensus 200 ~i~v~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~----------~~~~~~~~~c~~~~~~P~i~f~f-~g~ 268 (329)
T d1dpja_ 200 GIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAKK----------GWTGQYTLDCNTRDNLPDLIFNF-NGY 268 (329)
T ss_dssp EEEETTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCEE----------CTTSSEEECGGGGGGCCCEEEEE-TTE
T ss_pred eEEECCeEeeeeecccccCcccceeeCCHHHHHHHHHHhCCcc----------ccceeEEEeccccCccceEEEEE-CCE
Confidence 9999999998888899999999999999999999998774211 12346777777667899999999 779
Q ss_pred eeeeecceeEEeecCCcceEE-EEEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 400 SFVVRNHIFSFPENEGFTVFC-LTVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~C-l~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
++.+++++|+++.. ..| +++...+ ++.+|||++|||++|+|||+|++|||||++
T Consensus 269 ~~~l~p~~y~~~~~----~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a 328 (329)
T d1dpja_ 269 NFTIGPYDYTLEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKA 328 (329)
T ss_dssp EEEECTTTSEEEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEECHHHeEEecC----CcEEEEEEECccCCCCCCcEEEcHHhhCcEEEEEECCCCEEEEEEe
Confidence 99999999998764 356 5676543 346899999999999999999999999986
|
| >d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=100.00 E-value=6.8e-51 Score=417.18 Aligned_cols=305 Identities=21% Similarity=0.302 Sum_probs=247.6
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+.+.+ .+..|+++|.||||||++.|++||||+++||+|. |..|..+. ....|...+.|+|++|+|++...
T Consensus 5 ~~~~~-~~~~Y~~~i~iGtP~q~~~~i~DTGS~~~Wv~~~~~~c~~~~~~~---~~~~c~~~~~y~~~~SsT~~~~~--- 77 (334)
T d1j71a_ 5 TTLIN-EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQ---TNNFCKQEGTFDPSSSSSAQNLN--- 77 (334)
T ss_dssp EEEEE-CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTC---CTTGGGSSCCBCGGGCTTCEEEE---
T ss_pred eeecc-CCCEEEEEEEEcCCCeEEEEEEECCCcceEEeeCCCCcccccccc---CCcccccCCcCCcccCCcccCCC---
Confidence 33434 3678999999999999999999999999999886 34443322 22345567899999999999764
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|.+.|++| +++.|.++.|+++|++. ...++.|||..... ..+||+||
T Consensus 78 ---------------~~~~~~Y~~g-~~~~G~~~~D~~~~g~~--------~~~~~~f~~~~~~~-------~~~GilGl 126 (334)
T d1j71a_ 78 ---------------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMGI 126 (334)
T ss_dssp ---------------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEEC
T ss_pred ---------------cCEEEEeCCC-ceEEEEEEeeEEEEeee--------eccCceeeeeeeec-------cccCcccc
Confidence 8899999986 68999999999999875 35789999998764 34799999
Q ss_pred CCCCC--------ChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEE
Q 009271 257 GLGDV--------SVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESY 321 (538)
Q Consensus 257 G~~~~--------Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i 321 (538)
|+... +++.+|.++|+|. ++||+|+.+. ..|.|+||++|+.++. ++|++. ..+|.|++++|
T Consensus 127 g~~~~~~~~~~~~~~~~~l~~q~~i~~~~fs~~l~~~~~~~g~l~lGg~d~~~~~g~~~~~~~~~----~~~~~v~l~~i 202 (334)
T d1j71a_ 127 GFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRVHLGSI 202 (334)
T ss_dssp SCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEE
T ss_pred ccccccccccccchhhHHHHhccccccceEEEEeccCCCCCceEEecccChhhcccceeEeeecc----ccceEEeeceE
Confidence 97653 4788999999996 8999999864 4589999999998764 666643 36899999999
Q ss_pred EECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeee
Q 009271 322 CIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSF 401 (538)
Q Consensus 322 ~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~ 401 (538)
.||+..+. ....+||||||++++||+++|++|.+++...... ...||..+|. ...|.++|+|.+|.+|
T Consensus 203 ~v~g~~~~-~~~~aiiDSGt~~~~lp~~~~~~l~~~~~~~~~~---------~~~~~~~~~~--~~~p~i~f~f~~g~~~ 270 (334)
T d1j71a_ 203 NFDGTSVS-TNADVVLDSGTTITYFSQSTADKFARIVGATWDS---------RNEIYRLPSC--DLSGDAVFNFDQGVKI 270 (334)
T ss_dssp EETTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEET---------TTTEEECSSS--CCCSEEEEEESTTCEE
T ss_pred EECCEEec-ccccccccCCCcceeccHHHHHHHHHHhCCEEcC---------CCCeeecccc--ccCCCceEEeCCCEEE
Confidence 99999987 5678999999999999999999999877433211 1235555443 2469999999888999
Q ss_pred eeecceeEEeecCCcceEE-EEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 402 VVRNHIFSFPENEGFTVFC-LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 402 ~v~~~~y~~~~~~~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
+|++++|++...+ +.+| ++|+.. +.+|||++||+++|+|||+||+|||||+++|++.
T Consensus 271 ~i~~~~y~~~~~~--~~~C~~~i~~~--~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~~~~~ 328 (334)
T d1j71a_ 271 TVPLSELILKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSS 328 (334)
T ss_dssp EEEGGGGEEECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSC
T ss_pred EEChHHeEEecCC--CCEEEEEecCC--CCcEECHHhhCcEEEEEECCCCEEEEEECCCCCc
Confidence 9999999987654 5689 477654 4689999999999999999999999999999874
|
| >d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Atlantic cod (Gadus morhua) [TaxId: 8049]
Probab=100.00 E-value=1.6e-49 Score=403.81 Aligned_cols=301 Identities=22% Similarity=0.342 Sum_probs=248.8
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
+.++.|+.+..||++|.||||+|++.|++||||+++||+|. |..|..+ ..+.|||++|+|++...
T Consensus 3 ~~~~~n~~d~~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~~C~~~~~~----------~~~~f~p~~Sst~~~~~---- 68 (324)
T d1am5a_ 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACS----------NHNKFKPRQSSTYVETG---- 68 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHH----------TSCCBCGGGCTTCEEEE----
T ss_pred ceeeeccCCcEEEEEEEEcCCCeEEEEEEECCCcceEEecCCCCccccC----------CCCCCCcccCCceeECC----
Confidence 35677889999999999999999999999999999999998 8877532 34789999999999764
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
|.|.+.|++| +++|.++.|.+++++.. ..++.|+|+..+.+.+......+||+|||
T Consensus 69 --------------~~~~~~y~~g--~~~G~~~~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Gi~gLg 124 (324)
T d1am5a_ 69 --------------KTVDLTYGTG--GMRGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQAAAPFDGILGLA 124 (324)
T ss_dssp --------------EEEEEECSSC--EEEEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTTTTCSSSEEEECS
T ss_pred --------------cceEEEecCC--ceEEEEEEeecccCccc--------ceeEEEEEeeeeccceeeccccccccccc
Confidence 7899999985 58999999999998752 57889999999998876666789999999
Q ss_pred CCC------CChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEEEC
Q 009271 258 LGD------VSVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYCIG 324 (538)
Q Consensus 258 ~~~------~Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~Vg 324 (538)
+.. .+++.+|.++++|+ +.||+||.++ ..|.|+||++|+.++ .++|+... .+|.|.++++.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~~~~~p~~~~----~~~~v~~~~~~~~ 200 (324)
T d1am5a_ 125 YPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVN 200 (324)
T ss_dssp CGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE----TTEEEEECEEEET
T ss_pred CcccccCCCCcHHHHHHhccCcccceEEEEecCCCCCCceEEeeccccccccCceEEeecccc----ceEEEEEeeEEeC
Confidence 765 45888999999997 9999999764 469999999998764 37777542 6899999999999
Q ss_pred CeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 325 g~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
++.+......+||||||++++||+++|++|.+++..... .. ++...+.....+|.|+|+| ||.++.++
T Consensus 201 ~~~~~~~~~~~iiDsGts~~~lp~~~~~~l~~~i~~~~~------~~-----~~~~~~~~~~~~P~i~f~f-~g~~~~l~ 268 (324)
T d1am5a_ 201 GQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGASEN------QG-----EMMGNCASVQSLPDITFTI-NGVKQPLP 268 (324)
T ss_dssp TEECCCCCEEEEECTTCSSEEECTTTHHHHHHHHTCEEC------CC-----CEECCTTSSSSSCCEEEEE-TTEEEEEC
T ss_pred CcccccCCcceeeccCcccccCCHHHHHHHHHHhCCccc------CC-----cccccccccccCCceEEEE-CCEEEEEC
Confidence 999987888999999999999999999999987743211 11 1111122224689999999 78999999
Q ss_pred cceeEEeecCCcceEE-EEEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 405 NHIFSFPENEGFTVFC-LTVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~C-l~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
+++|+.... ..| ++|+..+ .+.+|||++|||++|+|||+|++|||||++
T Consensus 269 ~~~y~~~~~----~~c~~~i~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~igfA~a 323 (324)
T d1am5a_ 269 PSAYIEGDQ----AFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA 323 (324)
T ss_dssp HHHHEEESS----SCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEB
T ss_pred HHHhEecCC----CeEEEEEEecCcCCCCCCCEEECHHhhcCEEEEEECCCCEEEEEEc
Confidence 999987643 456 5676542 357899999999999999999999999986
|
| >d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Chymosin (synonym: renin) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6e-50 Score=409.10 Aligned_cols=308 Identities=22% Similarity=0.372 Sum_probs=242.8
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
.+++.|+.+..||++|.||||||++.|++||||+++||+|. |..|.... ..++.|+|++|+|++...
T Consensus 6 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~l~~DTGSs~~Wv~~~~C~~~~~~c--------~~~~~f~~~~SsT~~~~~---- 73 (335)
T d1smra_ 6 PVVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLAC--------GIHSLYESSDSSSYMENG---- 73 (335)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCGGG--------GGSCCBCGGGCTTCEEEE----
T ss_pred ceeecccCCCEEEEEEEECCCCeEEEEEEECCcccEEEEcCCCCCccccc--------cCCCcCCCccCcccccCC----
Confidence 47788999999999999999999999999999999999998 88775431 135799999999999753
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
|.|.+.|++| ++.|.++.|++++++.. ..+..+++.......+. ....+||+|||
T Consensus 74 --------------~~~~~~Y~~g--s~~G~~~~D~v~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~Gi~glg 128 (335)
T d1smra_ 74 --------------DDFTIHYGSG--RVKGFLSQDSVTVGGIT--------VTQTFGEVTQLPLIPFM-LAQFDGVLGMG 128 (335)
T ss_dssp --------------EEEEEEETTE--EEEEEEEEEEEEETTEE--------EEEEEEEEEECCHHHHT-TCSSSEEEECS
T ss_pred --------------CcEEEEecCc--eEEEEEEEEEEEecccc--------cccEEEEEEeccccccc-ccccccccccc
Confidence 7899999986 57999999999998752 23334444333332332 23679999999
Q ss_pred CCC------CChHHHHHhcCCCC-CceEEeecCC---CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEE
Q 009271 258 LGD------VSVPSLLAKAGLIQ-NSFSICFDEN---DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCI 323 (538)
Q Consensus 258 ~~~------~Sl~sqL~~~g~i~-~~FS~cl~~~---~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~V 323 (538)
+.. .++..+|.+++.|. +.||+||..+ ..|.|+||++++.++. ++|+.. ..+|.|.+++|.+
T Consensus 129 ~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~~g~l~~G~~d~~~~~~~~~~~~~~~----~~~~~v~~~~i~~ 204 (335)
T d1smra_ 129 FPAQAVGGVTPVFDHILSQGVLKEKVFSVYYNRGPHLLGGEVVLGGSDPQHYQGDFHYVSLSK----TDSWQITMKGVSV 204 (335)
T ss_dssp CGGGCGGGCCCHHHHHHHTTCBSSSEEEEEECCSSSSCCEEEEESSCCGGGEEEEEEEEECSB----TTTTEEEEEEEEE
T ss_pred cccccccCCCchHHHHHHhcCccccceeEEeccCCCccceeEeccccCcccccCceeeeeccc----ccceEEEEeEEEE
Confidence 876 35778899999987 9999999764 4689999999998764 666532 3689999999999
Q ss_pred CCeEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeee
Q 009271 324 GNSCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFV 402 (538)
Q Consensus 324 gg~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~ 402 (538)
+++.+.. ....+||||||++++||+++|++|.+++.+... ...||...|.....+|.|+|+| ||..+.
T Consensus 205 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~~----------~~~~~~~~c~~~~~~P~i~f~f-~g~~~~ 273 (335)
T d1smra_ 205 GSSTLLCEEGCEVVVDTGSSFISAPTSSLKLIMQALGAKEK----------RLHEYVVSCSQVPTLPDISFNL-GGRAYT 273 (335)
T ss_dssp TTSCCBCTTCEEEEECTTBSSEEECHHHHHHHHHHHTCEEE----------ETTEEEEEGGGGGGSCCEEEEE-TTEEEE
T ss_pred CCeeEeccCCceEEEeCCCCcccCCHHHHHHHHHHhCCeec----------cCCceeecccccCCCCccEEEE-CCeEEE
Confidence 9988763 456799999999999999999999988853221 1224445555556789999999 789999
Q ss_pred eecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 403 VRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 403 v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
+++++|++...+....+|+ +++..+ ++.+|||++|||++|+|||+|++|||||+++
T Consensus 274 l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~ak 335 (335)
T d1smra_ 274 LSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALAR 335 (335)
T ss_dssp ECHHHHBTT----CCCEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EChHHeEEEeccCCCCEEEEEEEecCcCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEEcC
Confidence 9999998765444467894 565432 3479999999999999999999999999975
|
| >d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=7.7e-49 Score=402.38 Aligned_cols=310 Identities=22% Similarity=0.369 Sum_probs=247.3
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC---CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~---C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
+++.| .+..|+++|.||||||++.|++||||+++||+|. |..|..... ...|.....|+|++|+|++...
T Consensus 5 ~~l~~-~~~~Y~~~i~iGtP~Q~~~~i~DTGS~~~Wv~~~~~~c~~~~~~~~---~~~~~~~~~y~~~~Sst~~~~~--- 77 (342)
T d1eaga_ 5 VTLHN-EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQT---ADFCKQKGTYDPSGSSASQDLN--- 77 (342)
T ss_dssp EEEEE-CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCC---TTGGGTTCCBCGGGCTTCEEEE---
T ss_pred eEecC-CCcEEEEEEEECCCCeEEEEEEECCCcceEEeecCCCccccccccC---ccccccCCcCCCccCcceeECC---
Confidence 45545 4778999999999999999999999999999997 344432221 1223456789999999999764
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
|.|++.|++| +.+.|.++.|+++|++. ...++.|++.+... ..+|++||
T Consensus 78 ---------------~~~~~~Y~~g-~~~~G~~~~d~~~~~~~--------~~~~~~~~~~~~~~-------~~~g~~Gl 126 (342)
T d1eaga_ 78 ---------------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILGV 126 (342)
T ss_dssp ---------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEEC
T ss_pred ---------------eeEEEEeCCC-ceEEEEEEeeEEEeceE--------eeeeeEEEeeceee-------cccccccc
Confidence 8999999996 78899999999999875 25778999987653 34799999
Q ss_pred CCCC-------CChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEeEeEEE
Q 009271 257 GLGD-------VSVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVGVESYC 322 (538)
Q Consensus 257 G~~~-------~Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~l~~i~ 322 (538)
|... .+++.+|.+++.+. ++||+||.+. ..|.|+||+.|+.++ .++|++. ..+|.|++++|.
T Consensus 127 g~~~~~~~~~~~~~~~~L~~q~~i~~~~fs~~l~~~~~~~G~l~~Gg~d~~~~~g~~~~~p~~~----~~~w~v~l~~i~ 202 (342)
T d1eaga_ 127 GYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS----DRELRISLGSVE 202 (342)
T ss_dssp SCGGGCSSCSCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEEE
T ss_pred cccccccCCccCccceehhhcCCccceEEEEEcCCCCCCCceEEEcccCchhccceEEEEeccc----ccceEEEEeeEE
Confidence 9654 36788999999986 8999999764 469999999998875 3777643 368999999999
Q ss_pred ECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeee
Q 009271 323 IGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFV 402 (538)
Q Consensus 323 Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~ 402 (538)
|||+.+......+||||||++++||+++|++|.+++.+..... .....||..+|. ..|.|+|+|.++..+.
T Consensus 203 vgg~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~l~~~~~~~------~~~~~~~~~~c~---~~p~i~f~f~~~~~~~ 273 (342)
T d1eaga_ 203 VSGKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD------SNGNSFYEVDCN---LSGDVVFNFSKNAKIS 273 (342)
T ss_dssp ETTEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC------TTSCEEEEEESC---CCSEEEEECSTTCEEE
T ss_pred ECCEEecccccccccccCCccccCCHHHHHHHHHHhCcccccc------CCCCceeccccc---cCCCEEEEECCCEEEE
Confidence 9999998778889999999999999999999998876544321 112346666665 4599999998889999
Q ss_pred eecceeEEeecCC---cceEEEEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCc
Q 009271 403 VRNHIFSFPENEG---FTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE 461 (538)
Q Consensus 403 v~~~~y~~~~~~~---~~~~Cl~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~ 461 (538)
+++++|++..... ....|....... +.+|||++|||++|+|||+|++|||||+++-++
T Consensus 274 i~~~~y~~~~~~~~~~~~~~~~~~~~~~-~~~ILG~~fl~~~y~vfD~~~~~iGfA~a~~~~ 334 (342)
T d1eaga_ 274 VPASEFAASLQGDDGQPYDKCQLLFDVN-DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp EEGGGGEEEC---CCSCTTEEEECEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred EChHHeEEEecCCCCceeeEEEEccCCC-CCcEECHHhhCcEEEEEECCCCEEEEEECCCCC
Confidence 9999998875432 134675444433 578999999999999999999999999998665
|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin species: Mucor pusillus [TaxId: 4840]
Probab=100.00 E-value=7.1e-48 Score=397.49 Aligned_cols=314 Identities=21% Similarity=0.259 Sum_probs=251.0
Q ss_pred eccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCC
Q 009271 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (538)
Q Consensus 102 ~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~ 180 (538)
+.|+.+..|+++|.||||||++.|+|||||+++||+|. |..|.. |..++.|||++|+|++.+.
T Consensus 8 ~~~~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~~C~~~~~---------c~~~~~f~~~~SsT~~~~~------- 71 (357)
T d1mppa_ 8 LYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEG---------CVGKRFFDPSSSSTFKETD------- 71 (357)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGT---------CCSSCCBCGGGCTTCEEEE-------
T ss_pred eecCCCCEEEEEEEEcCCCeEEEEEEeCCCcceEEccCCCCCCcc---------ccCCCCCCCccCCccccCC-------
Confidence 56888899999999999999999999999999999998 866532 1235689999999999864
Q ss_pred CCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCC-----CCCCCceEEe
Q 009271 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYL-----DGAAPDGVMG 255 (538)
Q Consensus 181 ~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~-----~~~~~dGIlG 255 (538)
|.+.+.|+++ ++.|.++.|++++++. ...++.|++++...+... .....+||+|
T Consensus 72 -----------~~~~~~y~~g--~~~G~~~~d~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~G 130 (357)
T d1mppa_ 72 -----------YNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFG 130 (357)
T ss_dssp -----------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEE
T ss_pred -----------cceEEecCCC--cEEEEEEeeecccccc--------eECcEEEEEEEeecccceecccccccccccccc
Confidence 7899999985 5899999999999875 357899999988765332 1235689999
Q ss_pred eCCCC------------CChHHHHHhcCCCC-CceEEeecCC-CCccEEeCCCCCCCc----eeeeeeecCCCCceEEEe
Q 009271 256 LGLGD------------VSVPSLLAKAGLIQ-NSFSICFDEN-DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAYFVG 317 (538)
Q Consensus 256 LG~~~------------~Sl~sqL~~~g~i~-~~FS~cl~~~-~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y~V~ 317 (538)
||+.. .+++.+|.++++|. ++||+||++. ..|.|+||++|+.++ .++|+........+|.|.
T Consensus 131 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~ 210 (357)
T d1mppa_ 131 AAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAP 210 (357)
T ss_dssp CSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEE
T ss_pred cccCCccccccccCCCCCCHHHHHHhccccccceEEEEeccCCCCceEECcccChhHcCCceeEEEeccCCCCceeEEEE
Confidence 99865 36899999999997 8999999863 679999999998754 488987765544689999
Q ss_pred EeEEEECCeEeec--CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccc-cccCccEEEE
Q 009271 318 VESYCIGNSCLTQ--SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEE-MLKVPDMRLI 394 (538)
Q Consensus 318 l~~i~Vgg~~l~~--~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~-~~~~P~it~~ 394 (538)
+++|.|+++.... ....+||||||++++||+++|++|.+++...... ...||..+|.. ....|.++|.
T Consensus 211 l~~i~v~g~~~~~~~~~~~~ilDSGts~~~lp~~~~~~i~~~~~~~~~~---------~~~~~~~~C~~~~~~~~~~~~~ 281 (357)
T d1mppa_ 211 VTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE---------SQQGYTVPCSKYQDSKTTFSLV 281 (357)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE---------ETTEEEEEHHHHTTCCCEEEEE
T ss_pred EeeEEECCeEeeecCCCcceEeeccCccccCCHHHHHHHHHHhcCCccc---------cCCceecccccccccCceEEEE
Confidence 9999999987642 3446899999999999999999999877432211 12355555532 2356888888
Q ss_pred EcCC------eeeeeecceeEEeecCCcceEE-EEEEecCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 395 FSKN------QSFVVRNHIFSFPENEGFTVFC-LTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 395 f~gg------~~~~v~~~~y~~~~~~~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
|.+. ..+.++++.|+.....+ +..| +++++..++.+|||++|||++|+|||+||+||||||++-...
T Consensus 282 ~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~c~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~ 355 (357)
T d1mppa_ 282 LQKSGSSSDTIDVSVPISKMLLPVDKS-GETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 355 (357)
T ss_dssp EECTTCSSCEEEEEEEGGGGEEECSSS-SCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred EeccccccccEEEEEchHHeEEEecCC-CCEEEEEEcCCCCCCEEechHHhCCEEEEEECCCCEEEEEECCcCCC
Confidence 8643 36788999888876543 5577 677777767899999999999999999999999999987653
|
| >d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Chymosin (synonym: renin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-48 Score=397.06 Aligned_cols=307 Identities=22% Similarity=0.387 Sum_probs=247.6
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
.+.+.|+.+.+||++|.||||||++.|+|||||+++||+|. |..|... |..++.|+|++|+|++...
T Consensus 6 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~~~~DTGS~~~Wv~~~~C~~~~~~--------c~~~~~y~~~~Sst~~~~~---- 73 (337)
T d1hrna_ 6 SVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTA--------CVYHKLFDASDSSSYKHNG---- 73 (337)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHH--------HHSSCCBCGGGCSSCEEEE----
T ss_pred ceEeEEcCCcEEEEEEEEeCCCEEEEEEEECCCcceEEEcCCCCCcccc--------cccCCCCChhhCCceEECC----
Confidence 35678999999999999999999999999999999999998 8777532 1134789999999999764
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
|.|.+.|++| ++.|.++.|++++++.. ..++.+++.......+. ....+||+|||
T Consensus 74 --------------~~~~~~~~~g--~~~G~~~~d~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~GilGl~ 128 (337)
T d1hrna_ 74 --------------TELTLRYSTG--TVSGFLSQDIITVGGIT--------VTQMFGEVTEMPALPFM-LAEFDGVVGMG 128 (337)
T ss_dssp --------------EEEEEEETTE--EEEEEEEEEEEEETTEE--------EEEEEEEEEECCHHHHT-TCSSCEEEECS
T ss_pred --------------ccEEEEecCc--EEEEEEEEeeeeecCce--------eeeEEEEEEeccccccc-ccccccccccc
Confidence 8899999985 58999999999998752 35556666655443443 23679999999
Q ss_pred CCC------CChHHHHHhcCCCC-CceEEeecCC------CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeE
Q 009271 258 LGD------VSVPSLLAKAGLIQ-NSFSICFDEN------DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVES 320 (538)
Q Consensus 258 ~~~------~Sl~sqL~~~g~i~-~~FS~cl~~~------~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~ 320 (538)
+.. .+++.+|.+++.|. +.|++||.+. ..|.|+||++|+.++. ++|+.. ..+|.|.+++
T Consensus 129 ~~~~~~~~~~~~~~~l~~~~~i~~~~f~~~l~~~~~~~~~~~g~l~~G~~d~~~~~~~~~~~~~~~----~~~~~v~~~~ 204 (337)
T d1hrna_ 129 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKG 204 (337)
T ss_dssp CGGGCGGGCCCHHHHHHTTTCBSSSEEEEEECCCCC---CCCEEEEETSCCGGGEEEEEEEEEBSS----TTSCEEEECE
T ss_pred ccccccCCCCcchhhHhhcCCCccceeeEEeccccCCCcccCceEEccccChhhcCCceeeeeeec----cceeEEeecc
Confidence 755 35788899999887 8999999753 4589999999987653 666642 3789999999
Q ss_pred EEECCeEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 321 YCIGNSCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 321 i~Vgg~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
+.++++.... ....+||||||++++||+++|++|.+++.... ...||...|.....+|+|+|+| ||.
T Consensus 205 ~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~-----------~~~~~~~~c~~~~~~P~l~f~f-~g~ 272 (337)
T d1hrna_ 205 VSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----------RLFDYVVKCNEGPTLPDISFHL-GGK 272 (337)
T ss_dssp EEETTEEEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----------CSSCEEEETTTGGGCCCEEEEE-TTE
T ss_pred eeccccccccccCcceEEeCCCcceeccHHHHHHHHHHhCCcc-----------cccceeeeccccCCCCceeEEE-CCE
Confidence 9999987753 45579999999999999999999998775321 1235666666667899999999 779
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
++.+++++|++....+...+|+ +|...+ ++.+|||++|||++|+|||+||+|||||+++
T Consensus 273 ~~~l~p~~yl~~~~~~~~~~C~~~i~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~IGfA~ak 337 (337)
T d1hrna_ 273 EYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 337 (337)
T ss_dssp EEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEChHHeEEEecCCCCCEEEEEEEcCCcCCCCCCCEEECHHhhCCEEEEEECCCCEEEEEEcC
Confidence 9999999998876554467894 666432 3478999999999999999999999999975
|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium vivax [TaxId: 5855]
Probab=100.00 E-value=3.2e-48 Score=402.49 Aligned_cols=305 Identities=18% Similarity=0.303 Sum_probs=243.4
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
..+++.|+.+.+||++|.||||||+|.|++||||+++||+|. |..|..+. .+.|+|++|+|++...
T Consensus 50 ~~~~l~n~~~~~Y~~~I~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~----------~~~y~~~~SsT~~~~~--- 116 (373)
T d1miqa_ 50 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI----------KNLYDSSKSKSYEKDG--- 116 (373)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG----------SCCBCGGGCTTCEEEE---
T ss_pred CeEEeeeccCCEEEEEEEECCCCEEEEEEEECCchheEEECCCCCCccccC----------CCccCCCCCCceeECC---
Confidence 346678899999999999999999999999999999999998 98875433 4789999999999764
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCC-CCCCCCCceEEe
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGS-YLDGAAPDGVMG 255 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~-~~~~~~~dGIlG 255 (538)
|.+.+.|++| ++.|.+++|+|++++. ...++.|++....... .......+|++|
T Consensus 117 ---------------~~~~~~y~~G--~~~G~~~~D~v~ig~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 171 (373)
T d1miqa_ 117 ---------------TKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPYKFIEVTDTDDLEPIYSSVEFDGILG 171 (373)
T ss_dssp ---------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEECGGGTTHHHHSCCCEEEE
T ss_pred ---------------ccEEEEeCCc--EEEEEEEEEEEEEcCc--------ceEeeEEEEEeccccCccccccccccccc
Confidence 8899999986 6899999999999885 3567778777654322 222336689999
Q ss_pred eCCCC------CChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEE
Q 009271 256 LGLGD------VSVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYC 322 (538)
Q Consensus 256 LG~~~------~Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~ 322 (538)
|+... ..+..++..++++. ++||+|+.++ ..|.|+|||.|+.++. |+|+. ...+|.|.++ +.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~g~l~~Gg~d~~~~~g~~~~~pv~----~~~~w~i~l~-~~ 246 (373)
T d1miqa_ 172 LGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN----HDLYWQIDLD-VH 246 (373)
T ss_dssp CSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS----SSSSSEEEEE-EE
T ss_pred cccccccCCCccceehhhhhhhccccceEEEEeccCCCCCceeeccCCCchhccceeeEEecc----ccceEEEEEE-EE
Confidence 99765 35788899999987 9999999865 4588999999988764 67763 2378999986 66
Q ss_pred ECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeee
Q 009271 323 IGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFV 402 (538)
Q Consensus 323 Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~ 402 (538)
+++.... ...+||||||++++||+++|++|.+++...... ...||...| ....+|+|+|+| ||..|.
T Consensus 247 ~~~~~~~--~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~~~~---------~~~~~~~~~-~~~~~P~itf~f-~g~~~~ 313 (373)
T d1miqa_ 247 FGKQTME--KANVIVDSGTTTITAPSEFLNKFFANLNVIKVP---------FLPFYVTTC-DNKEMPTLEFKS-ANNTYT 313 (373)
T ss_dssp ETTEEEE--EEEEEECTTBSSEEECHHHHHHHHHHHTCEECT---------TSSCEEEET-TCTTCCCEEEEC-SSCEEE
T ss_pred ECcEecC--CcceEeccCCceeccCHHHHHHHHHHhCCeecc---------CCCeeEecc-ccCCCceEEEEE-CCEEEE
Confidence 6766553 557999999999999999999999877432211 112332222 235789999999 779999
Q ss_pred eecceeEEeecCCcceEE-EEEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecC
Q 009271 403 VRNHIFSFPENEGFTVFC-LTVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSK 458 (538)
Q Consensus 403 v~~~~y~~~~~~~~~~~C-l~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~ 458 (538)
|++++|+....+..+..| ++|++.+ .+.||||++||++||+|||++++|||||+++
T Consensus 314 l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak 372 (373)
T d1miqa_ 314 LEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 372 (373)
T ss_dssp ECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHeeEEEEeCCCCEEEEEEEECCCCCCCEEEcHHhhCcEEEEEECCCCEEEEEEcC
Confidence 999999987654446778 7888765 3479999999999999999999999999975
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: beta-secretase (memapsin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-47 Score=396.63 Aligned_cols=317 Identities=18% Similarity=0.221 Sum_probs=248.2
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 009271 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (538)
Q Consensus 104 ~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 182 (538)
+.-+..|+++|.||||||++.|+|||||+++||+|. |..|. +.|+|++|+|++...
T Consensus 10 ~~~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~~c~~~~--------------~~f~~~~SsT~~~~~--------- 66 (387)
T d2qp8a1 10 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH--------------RYYQRQLSSTYRDLR--------- 66 (387)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS--------------CCCCGGGCTTCEEEE---------
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEECCccceEEccCCCCcCC--------------CccCcccCCCcEeCC---------
Confidence 455677999999999999999999999999999998 75552 479999999999764
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC
Q 009271 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (538)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S 262 (538)
|.|.+.|++| ++.|.+++|+|+|++... ...+..|++.......+......|||||||++..+
T Consensus 67 ---------~~~~i~Y~~g--~~~G~~~~D~v~i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s 129 (387)
T d2qp8a1 67 ---------KGVYVPYTQG--KWEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFINGSNWEGILGLAYAEIA 129 (387)
T ss_dssp ---------EEEEEECSSC--EEEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGC
T ss_pred ---------CcEEEEeCCc--cEEEEEEEEEEEEcCCCc------eeEeEEEEEEEecCCcccccccccccccccccccc
Confidence 7899999986 589999999999986421 22344455555444444444577999999987643
Q ss_pred --------hHHHHHhcCCCCCceEEeecCC------------CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeE
Q 009271 263 --------VPSLLAKAGLIQNSFSICFDEN------------DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGV 318 (538)
Q Consensus 263 --------l~sqL~~~g~i~~~FS~cl~~~------------~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l 318 (538)
+...|.+++++.+.||+|+... ..|.|+||++|+.++. ++|.. .+.+|.+.+
T Consensus 130 ~~~~~~~~~~~~l~~~~~~~~~fs~~l~~~~~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~----~~~~~~v~~ 205 (387)
T d2qp8a1 130 RPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR----REWYYEVII 205 (387)
T ss_dssp SSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC----SBTTBBCCE
T ss_pred cCCCCCCchHHHHhhccCcceeEeEeeccccccccccccccCCCceeEecccccccccCceEeeccc----ccceeEEEE
Confidence 4567888888889999999642 4689999999998764 44432 246899999
Q ss_pred eEEEECCeEeec-----CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccc--cccccccccccccccccCccE
Q 009271 319 ESYCIGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDM 391 (538)
Q Consensus 319 ~~i~Vgg~~l~~-----~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i 391 (538)
++|.|+++.+.. ....++|||||++++||+++|++|.++|............ ......|+...+.....+|.+
T Consensus 206 ~~i~v~g~~~~~~~~~~~~~~aiiDSGts~i~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~fp~~ 285 (387)
T d2qp8a1 206 VRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVI 285 (387)
T ss_dssp EEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCE
T ss_pred EEEEECCEecccccccCCccceEEecCCCeEeCCHHHHHHHHHHhcccccccccCCccccceeeeeeecCCCccccccce
Confidence 999999999863 2456999999999999999999999999877654432211 122356888777666679999
Q ss_pred EEEEcCC-----eeeeeecceeEEeecCC--cceEEEEEEe-cCCCceeEcceeeeeeEEEEeCCCCEEEEeecCCCccc
Q 009271 392 RLIFSKN-----QSFVVRNHIFSFPENEG--FTVFCLTVMS-TDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVI 463 (538)
Q Consensus 392 t~~f~gg-----~~~~v~~~~y~~~~~~~--~~~~Cl~i~~-~~~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~~ 463 (538)
+|.|.|. .++.++|.+|+....+. ....|+.+.. .....+|||++|||++|+|||+||+|||||+++|....
T Consensus 286 ~~~~~~~~~~~~~~~~i~p~~y~~~~~~~~~~~~~c~~~~~~~~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~c~~~~ 365 (387)
T d2qp8a1 286 SLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 365 (387)
T ss_dssp EEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred EEEeccccccceEEEEECHHHheeeccccCCcCceEEEEEeCCCCCCEEEhHHhhCcEEEEEECCCCEEEEEECCcCCCC
Confidence 9999763 35889999999876542 3467865543 34467999999999999999999999999999996533
Q ss_pred c
Q 009271 464 D 464 (538)
Q Consensus 464 ~ 464 (538)
+
T Consensus 366 ~ 366 (387)
T d2qp8a1 366 E 366 (387)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Probab=100.00 E-value=8.9e-47 Score=392.24 Aligned_cols=330 Identities=18% Similarity=0.283 Sum_probs=252.2
Q ss_pred ccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCC
Q 009271 107 YWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSC 185 (538)
Q Consensus 107 ~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 185 (538)
..+|+++|.|||| |+|||||+++||||+ |..|.+..+ .-....+|+++....|..+.|.... |
T Consensus 13 ~~~Y~~~i~iGtp-----liiDTGSs~~Wvpc~~c~~~~~~~~----------~~~~c~~~~~~~~~~c~~~~~~~~~-~ 76 (381)
T d1t6ex_ 13 TSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPC----------SSPTCLLANAYPAPGCPAPSCGSDK-H 76 (381)
T ss_dssp TCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBT----------TSHHHHHHHSSCCTTCCCCCC------
T ss_pred CCeEEEEEEcCCc-----eEEECCCCceeeccCCCCCCccccc----------CCchhhhccCcCCCCCCCccccCCC-C
Confidence 4589999999998 999999999999999 888865432 1122356778888888887776431 2
Q ss_pred CCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCChHH
Q 009271 186 KSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPS 265 (538)
Q Consensus 186 ~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~Sl~s 265 (538)
. ...|.|.++|++| +.+.|.+++|+|++++.........+..++.|+|...+.+.+... ..|||+|||+.+.++++
T Consensus 77 ~--~~~~~~~~~Y~~G-s~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dGi~Glg~~~~s~~~ 152 (381)
T d1t6ex_ 77 D--KPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPR-GSTGVAGLANSGLALPA 152 (381)
T ss_dssp ---CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCT-TEEEEEECSSSTTSHHH
T ss_pred C--CCCceeEEEeCCC-CEEEEEEEEEEEEecccccccceeeEEeeeeeecccccccccccc-CcceeeecCCCCcchHH
Confidence 1 1247799999996 678899999999999765332112234566777777666655443 56999999999999999
Q ss_pred HHHhcCCCCCceEEeecCCCCccEE--eCCCCCCC----ceeeeeeecCCCCceEEEeEeEEEECCeEeec-----CCce
Q 009271 266 LLAKAGLIQNSFSICFDENDSGSVF--FGDQGPAT----QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ-----SGFQ 334 (538)
Q Consensus 266 qL~~~g~i~~~FS~cl~~~~~G~l~--fG~~d~~~----~~~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~-----~~~~ 334 (538)
||+++++++++|++|+.+...+.+. ||+.+..+ ..++|++.... ..+|.|.+++|.+++..+.. ....
T Consensus 153 ql~~~~~~~~~fsl~l~~~~~~~~~~~~g~~~~~~~~g~~~~~pi~~~~~-~~~~~v~l~~i~v~~~~~~~~~~~~~~~~ 231 (381)
T d1t6ex_ 153 QVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG-SPAHYISARSIVVGDTRVPVPEGALATGG 231 (381)
T ss_dssp HHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTT-CCSCEECEEEEEETTEECCCCTTCSCTTC
T ss_pred HHhhhcCcceEEEeecCCCcccceEeecccccccccCCceEEEeeeccCC-CceeEEEEEEEeeCCeeeccCcccccCcc
Confidence 9999999999999999887555444 45555543 45999976543 46899999999999998852 3456
Q ss_pred EEEcCCCccccccHHHHHHHHHHHHHhhcccccc--------ccccccccccccccc----ccccCccEEEEEcCCeeee
Q 009271 335 ALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRIS--------LQGNSWKYCYNASSE----EMLKVPDMRLIFSKNQSFV 402 (538)
Q Consensus 335 aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~--------~~~~~~~~Cy~~~~~----~~~~~P~it~~f~gg~~~~ 402 (538)
+||||||++++||+++|++|.+++.+.+...... ....++..||+.+.. ....+|.|+|+|++++.+.
T Consensus 232 ~i~DTGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f~~~~~~~ 311 (381)
T d1t6ex_ 232 VMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWT 311 (381)
T ss_dssp EEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEE
T ss_pred eEEecCCceEECCHHHHHHHHHHHHHHhcccccccccccccccccCCcceeeccccccccccccccccEEEEEcCCcEEE
Confidence 9999999999999999999999998876532211 112456789887652 2346899999999999999
Q ss_pred eecceeEEeecCCcceEEEEEEecC--------CCceeEcceeeeeeEEEEeCCCCEEEEeecCC
Q 009271 403 VRNHIFSFPENEGFTVFCLTVMSTD--------GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 459 (538)
Q Consensus 403 v~~~~y~~~~~~~~~~~Cl~i~~~~--------~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C 459 (538)
+++++|++...+ +..|++++... ...+|||++|||++|+|||+|++|||||+..-
T Consensus 312 i~~~~y~~~~~~--~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~ 374 (381)
T d1t6ex_ 312 MTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp ECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred EChhHeEEEeCC--CcEEEEEEecccccCCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEECCC
Confidence 999999988765 68899887642 23699999999999999999999999999643
|
| >d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plant acid proteinase, phytepsin species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=3.3e-46 Score=379.58 Aligned_cols=308 Identities=24% Similarity=0.370 Sum_probs=247.4
Q ss_pred ceeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCC
Q 009271 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (538)
Q Consensus 98 ~~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~ 176 (538)
.++++.|+.+.+|+++|.||||||++.|++||||+++||+|. |..|.... ..+.|||++|+|++..
T Consensus 5 ~~~~l~~y~d~~Y~~~v~iGtP~q~~~l~~DTGS~~~Wv~~~~C~~~~~~~---------~~~~y~p~~SsT~~~~---- 71 (337)
T d1qdma2 5 DIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY---------LHSRYKAGASSTYKKN---- 71 (337)
T ss_dssp CSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG---------GSCCBCGGGCTTCBCC----
T ss_pred CeEeeeeecCCEEEEEEEEcCCCEEEEEEEECCCcceEEecCCCCCCcccc---------CCCCCCcccCCccccC----
Confidence 357788999999999999999999999999999999999998 87774322 3478999999999864
Q ss_pred CCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEee
Q 009271 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (538)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (538)
.|.|.+.|++| +..|.+++|++++++. ...++.|++.....+........+|++||
T Consensus 72 --------------~~~~~~~y~~g--s~~G~~~~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~~l 127 (337)
T d1qdma2 72 --------------GKPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGILGL 127 (337)
T ss_dssp --------------CCEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEEEEC
T ss_pred --------------CceEEEecCCc--eEEEEEEeeeEEEEee--------ccccceeeeeccccceeeccccccccccc
Confidence 48999999985 5789999999999875 35678888888776655443456899999
Q ss_pred CCCCC------ChHHHHHhcCCCC-CceEEeecCC----CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEE
Q 009271 257 GLGDV------SVPSLLAKAGLIQ-NSFSICFDEN----DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESY 321 (538)
Q Consensus 257 G~~~~------Sl~sqL~~~g~i~-~~FS~cl~~~----~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i 321 (538)
+++.. .+...+..++.+. +.|++||... ..|.|.||++|+.++. ++|+.. ..+|.+.+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~g~l~~g~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~ 203 (337)
T d1qdma2 128 GFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDV 203 (337)
T ss_dssp SCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCE
T ss_pred ccCccccCCCccchhhhhhhhccCCCeEEEEeecCCCcccCcceecCCcCccccccceeeeeecc----ccceeeccceE
Confidence 98664 3556777777776 8999999753 4689999999998764 555533 36799999999
Q ss_pred EECCeEeec--CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCe
Q 009271 322 CIGNSCLTQ--SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (538)
Q Consensus 322 ~Vgg~~l~~--~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (538)
.|++..+.. ....++|||||++++||.++|++|.+++.+..... .++...|.....+|.|+|+| ||.
T Consensus 204 ~v~~~~~~~~~~~~~~iiDtgt~~~~l~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~p~itf~f-~g~ 272 (337)
T d1qdma2 204 LVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGSPM----------GESAVDCGSLGSMPDIEFTI-GGK 272 (337)
T ss_dssp EETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCCSS----------SCCEECGGGGTTCCCEEEEE-TTE
T ss_pred EECCeEeeecCCCceEEeeccCcceecchHHHHHHHHHhccccccC----------CcccccccccCCCCceEEEE-CCE
Confidence 999988763 45679999999999999999999998886543211 12223333445789999999 789
Q ss_pred eeeeecceeEEeecCCcceEEE-EEEecC-----CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 400 SFVVRNHIFSFPENEGFTVFCL-TVMSTD-----GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 400 ~~~v~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
++.|++++|+....++...+|+ +|+..+ ++.+|||++|||++|+|||+|++||||||+
T Consensus 273 ~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~IlG~~fl~~~y~vfD~~~~~igfA~a 336 (337)
T d1qdma2 273 KFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 336 (337)
T ss_dssp EEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEEChHHeEEEeccCCCCEEEEEEEecCcCCCCCCcEEEhHHhhcCEEEEEECCCCEEEEEEC
Confidence 9999999999887655567895 566532 347999999999999999999999999986
|
| >d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Chymosin (synonym: renin) species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.3e-46 Score=374.67 Aligned_cols=303 Identities=20% Similarity=0.306 Sum_probs=243.2
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
.+++.|+.+..|+++|.||||||++.|++||||+++||+|. |..|..+ ..+.|+|++|+|++.+.
T Consensus 5 svPl~~~~d~~Y~~~i~vGtP~q~~~~~~DTGSs~~Wv~~~~C~~~~~~----------~~~~y~~~~Sst~~~~~---- 70 (323)
T d3cmsa_ 5 SVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK----------NHQRFDPRKSSTFQNLG---- 70 (323)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH----------TSCCBCGGGCTTCEEEE----
T ss_pred EEeeEeccCCEEEEEEEECCCCEEEEEEEECCCCceEEecCCCCCcccC----------CCCCCCccccCccccCC----
Confidence 46677888999999999999999999999999999999998 9887533 35799999999999874
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeC
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG 257 (538)
|.|.+.|++| +++|.++.|.++|++.. .....|++.....+.........+++|++
T Consensus 71 --------------~~~~~~y~~g--s~~G~~~~d~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 126 (323)
T d3cmsa_ 71 --------------KPLSIHYGTG--SMQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDFFTYAEFDGILGMA 126 (323)
T ss_dssp --------------EEEEEEETTE--EEEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHHHHSSCSEEEECS
T ss_pred --------------CcEEEEcCCc--eEEEEEEEEEEEEeccc--------cccceEEEEEeeccccccccccccccccc
Confidence 8899999975 57899999999998752 35556666665554332222456888887
Q ss_pred CCC------CChHHHHHhcCCCC-CceEEeecCC-CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECC
Q 009271 258 LGD------VSVPSLLAKAGLIQ-NSFSICFDEN-DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGN 325 (538)
Q Consensus 258 ~~~------~Sl~sqL~~~g~i~-~~FS~cl~~~-~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg 325 (538)
+.. .+++.+|.++++|. +.||+||.++ ..|.+.+|+.+..++. ++|.. ...+|.+.+..+.+++
T Consensus 127 ~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~~~~~g~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 202 (323)
T d3cmsa_ 127 YPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT----VQQYWQFTVDSVTISG 202 (323)
T ss_dssp CGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS----SBTTBEEEEEEEEETT
T ss_pred ccccccCCCcchhhhHhhcCCCcccceeEEeccCCCCCceeccccCcccccCceEEeecc----ccceeEEEEeeEeeCC
Confidence 643 56788999999997 8999999876 4689999999887754 44442 2368999999999998
Q ss_pred eEeec-CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeee
Q 009271 326 SCLTQ-SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (538)
Q Consensus 326 ~~l~~-~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~ 404 (538)
..... ....++|||||++++||+++|++|.+++.+... ...|+...|.....+|.|+|+| +|..++++
T Consensus 203 ~~~~~~~~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~p~i~f~f-~g~~~~l~ 271 (323)
T d3cmsa_ 203 VVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQN----------QYGEFDIDCDNLSYMPTVVFEI-NGKMYPLT 271 (323)
T ss_dssp EEEESTTCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE----------TTTEEEECTTCTTTSCCEEEEE-TTEEEEEC
T ss_pred eeeecCCCeeEEEecCcceEEecHHHHHHHHHHhCceec----------cCCceeEeccccCCCCeEEEEE-CCEEEEEC
Confidence 87763 456899999999999999999999988754322 1346666666667899999999 67999999
Q ss_pred cceeEEeecCCcceEEEEEEecCC-CceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 405 NHIFSFPENEGFTVFCLTVMSTDG-DYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 405 ~~~y~~~~~~~~~~~Cl~i~~~~~-~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
+++|+.... +..|++|++.++ +.+|||++||+++|++||+|++||||||+
T Consensus 272 ~~~y~~~~~---~~c~~~i~~~~~~~~~iLG~~~l~~~yvvfD~~~~~igfa~a 322 (323)
T d3cmsa_ 272 PSAYTSQDQ---GFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKA 322 (323)
T ss_dssp HHHHEEEET---TEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred HHHeEEcCC---CEEEEEEEeCCCCCCEEEcHHhhCcEEEEEECCCCEEEEEEe
Confidence 999987653 344488887763 47899999999999999999999999986
|
| >d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium falciparum, plasmepsin II [TaxId: 5833]
Probab=100.00 E-value=4.3e-46 Score=378.44 Aligned_cols=306 Identities=19% Similarity=0.263 Sum_probs=238.4
Q ss_pred eeeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCC
Q 009271 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (538)
Q Consensus 99 ~~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~ 177 (538)
.+.+.|+.+.+||++|.||||||++.|++||||+++||+|. |..|..+ ..+.|+|++|+|++...
T Consensus 5 ~~~l~~~~~~~Y~~~v~iGtP~q~~~~~~DTGS~~~Wv~~~~C~~~~~~----------~~~~y~~~~SsT~~~~~---- 70 (329)
T d2bjua1 5 NIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCL----------TKHLYDSSKSRTYEKDG---- 70 (329)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGG----------GSCCBCGGGCTTCEEEE----
T ss_pred cEEeEEecCCEEEEEEEECCCCEEEEEEEECCCcceEEECCCCCCcccc----------CCCCCCcccCCCccCCC----
Confidence 35677888999999999999999999999999999999998 9887543 24789999999999764
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCC-CCCCCCCceEEee
Q 009271 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGS-YLDGAAPDGVMGL 256 (538)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~-~~~~~~~dGIlGL 256 (538)
|.|.+.|++| +..|.++.|++++++.. .....+++....... .......+|++||
T Consensus 71 --------------~~~~~~Y~~g--~~~G~~~~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 126 (329)
T d2bjua1 71 --------------TKVEMNYVSG--TVSGFFSKDLVTVGNLS--------LPYKFIEVIDTNGFEPTYTASTFDGILGL 126 (329)
T ss_dssp --------------EEEEEECSSS--EEEEEEEEEEEEETTEE--------EEEEEEEEEECGGGTTHHHHSSCCEEEEC
T ss_pred --------------ccEEEEcCCC--cEEEEEEEeeeeeeeee--------eccceEEEEEeeccCccccccccCccccc
Confidence 8899999986 58999999999998852 345566665544311 1112356899999
Q ss_pred CCCC------CChHHHHHhcCCCC-CceEEeecCC--CCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEE
Q 009271 257 GLGD------VSVPSLLAKAGLIQ-NSFSICFDEN--DSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCI 323 (538)
Q Consensus 257 G~~~------~Sl~sqL~~~g~i~-~~FS~cl~~~--~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~V 323 (538)
+.+. ..+..++..++.+. +.|++||... ..|.|+||+.++.++. ++|+.. ..+|.|.++.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~i~~~~fs~~l~~~~~~~g~l~~gg~d~~~~~g~~~~~~~~~----~~~~~v~~~~~~~ 202 (329)
T d2bjua1 127 GWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLDAHVG 202 (329)
T ss_dssp SCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEEEEET
T ss_pred cccccccCCccccchhhhhhhccccceeeEEecCCcCCcceeeecCCCcccccCceEEEeeee----eeeEEEEEeeeEe
Confidence 8644 45777888888886 9999999864 4699999999887653 666643 3689999988876
Q ss_pred CCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeee
Q 009271 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (538)
Q Consensus 324 gg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v 403 (538)
+... ....++|||||++++||+++|++|++++.... .... .+|...| ....+|.++|+| ++.++.+
T Consensus 203 ~~~~---~~~~~~iDSGt~~~~lp~~~~~~l~~~~~~~~----~~~~-----~~~~~~~-~~~~~p~~~f~~-~g~~~~i 268 (329)
T d2bjua1 203 NIML---EKANCIVDSGTSAITVPTDFLNKMLQNLDVIK----VPFL-----PFYVTLC-NNSKLPTFEFTS-ENGKYTL 268 (329)
T ss_dssp TEEE---EEEEEEECTTCCSEEECHHHHHHHTTTSSCEE----CTTS-----SCEEEET-TCTTCCCEEEEC-SSCEEEE
T ss_pred eeEc---cCCcccccccccceeCCHHHHHHHHHHhCCee----cCCC-----CeeEeec-ccCCCCceeEEe-CCEEEEE
Confidence 5332 34569999999999999999999987663222 1111 1222222 234789999999 5678999
Q ss_pred ecceeEEeecCCcceEE-EEEEecC--CCceeEcceeeeeeEEEEeCCCCEEEEeecCCC
Q 009271 404 RNHIFSFPENEGFTVFC-LTVMSTD--GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCE 460 (538)
Q Consensus 404 ~~~~y~~~~~~~~~~~C-l~i~~~~--~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~ 460 (538)
++++|+....++...+| ++|+..+ .+.+|||++||+++|+|||+|++|||||+++++
T Consensus 269 ~p~~y~~~~~~~~~~~C~~~i~~~~~~~~~~IlG~~fl~~~y~vfD~~~~~iGfA~a~~n 328 (329)
T d2bjua1 269 EPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAKKN 328 (329)
T ss_dssp CHHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEECSC
T ss_pred CHHHhEEEeecCCCCEEEEEEEECCCCCCCEEEchHhhCcEEEEEECCCCEEEEEEeccC
Confidence 99999988766545677 7888764 358999999999999999999999999999874
|
| >d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]
Probab=100.00 E-value=2.4e-45 Score=376.17 Aligned_cols=297 Identities=19% Similarity=0.275 Sum_probs=230.9
Q ss_pred eeeccccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCC
Q 009271 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (538)
Q Consensus 100 ~~~~~~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~ 178 (538)
+++.|.. ..|+++|.||||||++.|++||||+++||+|. |..| |+|++..
T Consensus 5 ~p~~~~~-~~Y~~~i~iGtP~Q~~~~i~DTGSs~~wv~~~~c~~~----------------------sst~~~~------ 55 (340)
T d1wkra_ 5 VPATNQL-VDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVK----------------------TSTSSAT------ 55 (340)
T ss_dssp EEEEECS-SCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCCCC----------------------CTTCEEE------
T ss_pred EceecCC-eEEEEEEEEcCCCeEEEEEEECCCcceEEcCCCCCCC----------------------CCCcCCC------
Confidence 3444543 45999999999999999999999999999986 5322 4455432
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCC
Q 009271 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (538)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~ 258 (538)
.+.|.+.|++| ++.|.+++|++++++. ...++.|||++...+.. ..+||+|||+
T Consensus 56 ------------~~~~~i~Y~~g--s~~G~~~~D~~~~~~~--------~~~~~~fg~~~~~~~~~----~~~gi~g~g~ 109 (340)
T d1wkra_ 56 ------------SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSGFD----GVDGILGVGP 109 (340)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESCT----TCSEEEECSC
T ss_pred ------------CCeEEEEeCCe--EEEEEEEEEEEeeCCe--------eeccEEEEEEEeccCcc----cccceecccc
Confidence 36899999986 5899999999999874 36889999999887642 5689999997
Q ss_pred CC--------------CChHHHHHhcCCCC-CceEEeecCC-----CCccEEeCCCCCCCc----eeeeeeecCCCCceE
Q 009271 259 GD--------------VSVPSLLAKAGLIQ-NSFSICFDEN-----DSGSVFFGDQGPATQ----QSTSFLPIGEKYDAY 314 (538)
Q Consensus 259 ~~--------------~Sl~sqL~~~g~i~-~~FS~cl~~~-----~~G~l~fG~~d~~~~----~~tplv~~~~~~~~y 314 (538)
.. .+++.+|.+++.+. +.|++||.++ ..|.|+||++++.++ .++|++.......+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~~q~~i~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~~~~~g~i~~~pv~~~~~~~~y~ 189 (340)
T d1wkra_ 110 VDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYW 189 (340)
T ss_dssp GGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSS
T ss_pred cccccccccCccccCcCchhhhHHhhhccchhheeeeecccCCCCCCCceEEccccChhhcccceEEEEeecCCCCccee
Confidence 53 25788999999996 8999999753 348899999998754 489997665555689
Q ss_pred EEeEeEEEECCeEeecCCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEE
Q 009271 315 FVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLI 394 (538)
Q Consensus 315 ~V~l~~i~Vgg~~l~~~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~ 394 (538)
.|.++.+.++++.+. ....+||||||++++||+++|++|.+++..... . ...+|..+|.....+|+|+|+
T Consensus 190 ~i~~~~~~~~~~~~~-~~~~aiiDSGtt~~~lP~~~~~~l~~~~~~~~~----~-----~~~~~~~~c~~~~~~P~i~f~ 259 (340)
T d1wkra_ 190 GINQSIRYGSSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVAD----N-----NTGLLRLTTAQYANLQSLFFT 259 (340)
T ss_dssp EEEEEEEETTTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEEC----T-----TTSSEEECHHHHHTCCCEEEE
T ss_pred EEEEEEEECCceEec-cCcceEEecCCccEeccHHHHHHHHHHhCcccc----C-----CceEEEEeccccCCCCceEEE
Confidence 999987777777665 567899999999999999999999977752211 1 123566667666689999999
Q ss_pred EcCCeeeeeecceeEEeecCC-------cceEE-EEEEecC---CCceeEcceeeeeeEEEEeCCCCEEEEeecCCCcc
Q 009271 395 FSKNQSFVVRNHIFSFPENEG-------FTVFC-LTVMSTD---GDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV 462 (538)
Q Consensus 395 f~gg~~~~v~~~~y~~~~~~~-------~~~~C-l~i~~~~---~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~~C~~~ 462 (538)
| +|.++++++++|+...... ....| ++..... +..||||++|||++|+|||+|++|||||++++++.
T Consensus 260 f-~g~~~~i~~~~yi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~ 337 (340)
T d1wkra_ 260 I-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp E-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred E-CCEEEEEChHHeEeeccCceeecCccceEEEEEecccCCCCCCCCEEechHHhCCEEEEEECCCCEEEEEECCCCCC
Confidence 9 6799999999998654311 12233 3333222 23689999999999999999999999999998764
|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Fungus (Aspergillus oryzae) [TaxId: 5062]
Probab=100.00 E-value=2e-45 Score=373.51 Aligned_cols=295 Identities=18% Similarity=0.274 Sum_probs=227.9
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009271 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (538)
Q Consensus 105 ~~~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 183 (538)
..+..|+++|.||+ |++.|++||||+++||+|. |..|... ..+.|+|+ |||+...
T Consensus 12 ~~d~~Y~~~i~iG~--q~~~l~~DTGSs~~Wv~~~~C~~~~~~----------~~~~~~~~-sSt~~~~----------- 67 (323)
T d1izea_ 12 SNDEEYITQVTVGD--DTLGLDFDTGSADLWVFSSQTPSSERS----------GHDYYTPG-SSAQKID----------- 67 (323)
T ss_dssp GGGCCEEEEEEETT--EEEEEEEETTCCCCEECBTTSCHHHHT----------TSCCBCCC-TTCEEEE-----------
T ss_pred CCccEEEEEEEECC--eeEEEEEECCCcceEEEcCCCCChhhc----------CCCccCcc-ccccccC-----------
Confidence 33677999999995 7899999999999999998 8777433 24678776 4455532
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCC-
Q 009271 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS- 262 (538)
Q Consensus 184 ~C~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~S- 262 (538)
.|.|++.|++| +.+.|.+++|++++++. ...++.|++.....+.+......|||||||+...+
T Consensus 68 -------~~~~~i~Y~~G-~~~~G~~~~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~~~ 131 (323)
T d1izea_ 68 -------GATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINT 131 (323)
T ss_dssp -------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred -------CCEEEEEcCCc-ceeeeEEEeeeeeccCc--------cccceEEEEEEeccCccccccccccccccccccccc
Confidence 48999999996 78899999999999875 35788999998876655444567999999986533
Q ss_pred --------hHHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECCeEeec
Q 009271 263 --------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (538)
Q Consensus 263 --------l~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~ 330 (538)
+..++. ..+-.++|++||.++..|.|+||++|+.++. ++|+.. ...+|.|.+++|.|+++...
T Consensus 132 ~~~~~~~~~~~~~~-~~~~~~~fs~~l~~~~~g~l~~Gg~d~~~~~g~~~~~~~~~---~~~~~~v~~~~i~v~~~~~~- 206 (323)
T d1izea_ 132 VQPTPQKTFFDNVK-SSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDN---SQGFWGFTADGYSIGSDSSS- 206 (323)
T ss_dssp CBSSCCCCHHHHHG-GGSSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBC---TTSSCEEEESEEEETTEEEC-
T ss_pred cCcccchHHHHhhh-hhcCcceEEEEccCCCCeeEEccccCcccccCcceeeeecC---CCceEEEEeceEEECCCccc-
Confidence 333332 2233499999999888899999999998874 555532 34689999999999999887
Q ss_pred CCceEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEE
Q 009271 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (538)
Q Consensus 331 ~~~~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~ 410 (538)
....+||||||++++||+++|+++.+++... ..... ...+..+|. ..+|.|+|+| ||.++.|+++.|++
T Consensus 207 ~~~~~ivDSGts~~~lp~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~--~~~p~i~f~f-~g~~~~ip~~~~~~ 275 (323)
T d1izea_ 207 DSITGIADTGTTLLLLDDSIVDAYYEQVNGA----SYDSS----QGGYVFPSS--ASLPDFSVTI-GDYTATVPGEYISF 275 (323)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHHTTSTTC----EEETT----TTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred cCceEEeccCCccccCCHHHHHHHHHHcCCc----cccCC----CCcEEeecc--cCCceEEEEE-CCEEEEcChHHEEE
Confidence 5678999999999999999999988655321 11111 112222232 4689999999 78999999888887
Q ss_pred eecCCcceEE-EEEEecC-CCceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 411 PENEGFTVFC-LTVMSTD-GDYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 411 ~~~~~~~~~C-l~i~~~~-~~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
.... +..| ++|.... .+.+|||++|||++|+|||+|++|||||+.
T Consensus 276 ~~~~--~~~C~~~i~~~~~~~~~iLG~~flr~~y~vfD~~~~~IGfA~~ 322 (323)
T d1izea_ 276 ADVG--NGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EECS--TTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EeCC--CCEEEEEEECCCCCCCEEECHHHhCCEEEEEECCCCEEEEccC
Confidence 6543 4678 5676554 357899999999999999999999999985
|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]
Probab=100.00 E-value=2.5e-45 Score=372.56 Aligned_cols=294 Identities=18% Similarity=0.318 Sum_probs=231.3
Q ss_pred ccEEEEEEEecCCCeEEEEEEEcCCCceeEecC-CCCCCCCccccccccCCCCCCCCCCCCCCCccccCCCCCCCCCCCC
Q 009271 107 YWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSC 185 (538)
Q Consensus 107 ~~~yy~~v~iGtP~q~~~v~lDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~C 185 (538)
+..|+++|.|||| ++.|++||||+++||+|. |..|..+ ..+.|+|++|+|++.
T Consensus 14 d~~Y~~~i~vG~~--~~~v~~DTGSs~~Wv~~~~C~~c~~~----------~~~~y~~s~Sst~~~-------------- 67 (323)
T d1bxoa_ 14 DEEYITPVTIGGT--TLNLNFDTGSADLWVFSTELPASQQS----------GHSVYNPSATGKELS-------------- 67 (323)
T ss_dssp GSCEEEEEEETTE--EEEEEEETTCCCEEECBTTSCHHHHT----------TSCCBCHHHHCEEEE--------------
T ss_pred CcEEEEEEEECCc--cEEEEEECCCcceEEECCCCCchhhc----------CCCCCCCcccccccC--------------
Confidence 5689999999985 578999999999999998 8877533 247899999998874
Q ss_pred CCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCccccccEEEEEEEeecCCCCCCCCCceEEeeCCCCCCh--
Q 009271 186 KSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV-- 263 (538)
Q Consensus 186 ~~~~~~c~y~~~Y~dg~ss~~G~l~~D~v~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLG~~~~Sl-- 263 (538)
.|.|.+.|++| +++.|.+++|++++++. ...++.|++.......+......+||||||+...+.
T Consensus 68 -----~~~~~~~Y~~G-~~~~G~~~~D~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~GilGlg~~~~s~~~ 133 (323)
T d1bxoa_ 68 -----GYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQ 133 (323)
T ss_dssp -----EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCB
T ss_pred -----CCEEEEEeCCC-CcEEEEEEEEeeeccCc--------ccccceeeeeeeeecccccccccccccccccCcccccC
Confidence 48999999996 78999999999999875 357889999988776655445779999999765332
Q ss_pred ------HHHHHhcCCCCCceEEeecCCCCccEEeCCCCCCCce----eeeeeecCCCCceEEEeEeEEEECCeEeecCCc
Q 009271 264 ------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQ----STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333 (538)
Q Consensus 264 ------~sqL~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~~~----~tplv~~~~~~~~y~V~l~~i~Vgg~~l~~~~~ 333 (538)
..++.+..+..+.|++++..+..|.|+||++|+.++. ++|++. ...+|.+.+++|.||++... ..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~~~~~~--~~ 208 (323)
T d1bxoa_ 134 PQSQTTFFDTVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDN---SQGFWSFNVDSYTAGSQSGD--GF 208 (323)
T ss_dssp SSCCCCHHHHHGGGBSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBC---TTSSCEEEEEEEEETTEEEE--EE
T ss_pred CCcCchHHHHHhhhcccceeeeccccCCCceeeeeccccccccCceeeeeccC---cccceeEeeeeEEECCEecC--Cc
Confidence 2333333445589999999888899999999987653 666643 24689999999999988765 45
Q ss_pred eEEEcCCCccccccHHHHHHHHHHHHHhhcccccccccccccccccccccccccCccEEEEEcCCeeeeeecceeEEeec
Q 009271 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPEN 413 (538)
Q Consensus 334 ~aiiDSGTs~t~LP~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~v~~~~y~~~~~ 413 (538)
.++|||||++++||+++|++|.+++...... .. ...|..+|. ..+|+|+|+| ||.++.|+++.|++...
T Consensus 209 ~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~----~~----~~~~~~~c~--~~~p~itf~f-~g~~~~i~~~~~~~~~~ 277 (323)
T d1bxoa_ 209 SGIADTGTTLLLLDDSVVSQYYSQVSGAQQD----SN----AGGYVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPS 277 (323)
T ss_dssp EEEECTTCSSEEECHHHHHHHHTTSTTCEEE----TT----TTEEEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEEC
T ss_pred ceEEecccccccCCHHHHHHHHHHhCCcccc----CC----CCcEEEecc--CCCCcEEEEE-CCEEEEEChHHeEEEEc
Confidence 7999999999999999999998665432211 11 112333443 3689999999 77999999998877654
Q ss_pred CCcceEEE-EEEecCC-CceeEcceeeeeeEEEEeCCCCEEEEeec
Q 009271 414 EGFTVFCL-TVMSTDG-DYGIIGQNFMMGHRIVFDRENLKLAWSHS 457 (538)
Q Consensus 414 ~~~~~~Cl-~i~~~~~-~~~IlG~~fl~~~yvVFD~e~~rIGfa~~ 457 (538)
.+ +.+|+ +|...++ +.+|||++|||++|+|||+|++|||||+.
T Consensus 278 ~~-~~~C~~~i~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~ 322 (323)
T d1bxoa_ 278 GD-GSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp SS-SSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CC-CCEEEEEEECCCCCCcEEECHHHhCCEEEEEECCCCEEeEEeC
Confidence 33 67896 5666543 46899999999999999999999999985
|