Citrus Sinensis ID: 009313

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
MARSERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
ccccccHHHHHHHHHcccccccccccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEECccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccccHHHHHcccccEEEEEEccccccccccccEEEEEEECccccccccccccccccccccccEEEcccHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHccccEEEEccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHcccccccccccHHHcccccccc
***************************LTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSA************PYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MARSERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVxxxxxxxxxxxxxxxxxxxxxxxxxxxxLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-ketoacyl-CoA synthase 10 Contributes to cuticular wax and suberin biosynthesis. Prevents the postgenital fusion of epiderm cells in organs in contact, as well as ectopic pollen hydration and germination. Required during ovules formation. May regulates an epidermis-specific developmental program during gynoecial ontogeny.confidentQ570B4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.3.-.-Acyltransferases.probable
2.3.1.-Transferring groups other than amino-acyl groups.probable
2.3.1.119Icosanoyl-CoA synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1U0M, chain A
Confidence level:very confident
Coverage over the Query: 123-373,393-408,419-517
View the alignment between query and template
View the model in PyMOL
Template: 1U6E, chain A
Confidence level:very confident
Coverage over the Query: 122-191,202-408,419-514
View the alignment between query and template
View the model in PyMOL
Template: 3E1H, chain A
Confidence level:very confident
Coverage over the Query: 119-375,398-517
View the alignment between query and template
View the model in PyMOL