Citrus Sinensis ID: 009313

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
MARSERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
ccccccHHHHHHHHHcccccccccccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccccHHHHHcccccEEEEEEccccccccccccEEEEEEEEccccccccccccccccccccccEEEcccHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHccccEEEEccccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHcccccccccccHHHcccccccc
ccccHHHHHHHHHHHccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccHccccEEEEEcccccccccHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEcEccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEHHHHHHccccccccccEEEEEEcccccEEEEccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccHHcccHcHHEHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccccccHHHHHHHcccccccccccHHHHccccccc
MARSERDLLSTEIVNRgiessgpnagsltFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYfmsrprsvylvdfacyrpsddlkvTREQFIEVAGkwsksdeaSLDFQRRIMKssgigdetyipKVVMSAEENCMTMKHGRLEASMVMFGALDELFektkvrpkdvgILVVNcsifnptpsLSAMIINHYKMRGNIisynlggmgcsagVIGVDLARDmlqanpnnyAVVVSTEMvgynwyagrdrsmmipncffrMGCSAILMSNRRRDYHRAKYRLQLIVRthtgaddrsfrsVYQEEDEQGFRGLKVSKNIMEIGGDALKtnittlgplvlpfseQLFFFATLVWRHLFsgsadksrssslastkpyipdyKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLhrfgntsssSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRvkkparnpwldcvdrypval
MARSERDLLSTEIvnrgiessgpnagsltfSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEvagkwsksdeaslDFQRRIMkssgigdetyipKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLivrthtgaddrsfrsvyqeedeqgfrglkvsKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSgsadksrssslASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLhrfgntssssIWYELAYLEAKERVKRGDRVWQIAfgsgfkcnsvVWQAMRRvkkparnpwldcvdrypval
MARSERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLAsvlgffgvfvftlsvYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFsgsadksrssslasTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
***************************LTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWS*******DFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVY*****QGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFS***************PYIPDYKLAFEHFCVHAASKTVLDEL********************F****SSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRY****
************************************RLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN********KYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSA************PYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
********LSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSV********FRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFS************STKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
*******LLS*EIVNRGIE********LTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSA*******LASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MARSERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVxxxxxxxxxxxxxxxxxxxxxxxxxxxxLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWLDCVDRYPVAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query537 2.2.26 [Sep-21-2011]
Q570B4550 3-ketoacyl-CoA synthase 1 yes no 0.990 0.967 0.765 0.0
Q9LN49516 3-ketoacyl-CoA synthase 4 no no 0.916 0.953 0.590 1e-179
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.903 0.947 0.564 1e-174
O48780509 3-ketoacyl-CoA synthase 1 no no 0.905 0.954 0.572 1e-171
Q5XEP9528 3-ketoacyl-CoA synthase 1 no no 0.906 0.922 0.559 1e-166
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.897 0.969 0.552 1e-165
Q9MAM3528 3-ketoacyl-CoA synthase 1 no no 0.912 0.928 0.538 1e-161
O65677487 Probable 3-ketoacyl-CoA s no no 0.867 0.956 0.554 1e-157
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.901 0.983 0.532 1e-156
Q9FG87529 3-ketoacyl-CoA synthase 1 no no 0.895 0.909 0.558 1e-153
>sp|Q570B4|KCS10_ARATH 3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2 Back     alignment and function desciption
 Score =  887 bits (2291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/555 (76%), Positives = 487/555 (87%), Gaps = 23/555 (4%)

Query: 1   MARS-ERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLIN 59
           M RS E+DLLSTEIVNRGIE SGPNAGS TFSVRVRRRLPDFLQSVNLKYVKLGYHYLIN
Sbjct: 1   MGRSNEQDLLSTEIVNRGIEPSGPNAGSPTFSVRVRRRLPDFLQSVNLKYVKLGYHYLIN 60

Query: 60  HAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSR 119
           HA+YLATIPVL+LVFSAEVGSLSREE+W+KLW+   +DLA+V+GFFGVFV T  VYFMSR
Sbjct: 61  HAVYLATIPVLVLVFSAEVGSLSREEIWKKLWD---YDLATVIGFFGVFVLTACVYFMSR 117

Query: 120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPK 179
           PRSVYL+DFACY+PSD+ KVT+E+FIE+A K  K DE +L F++RI+++SGIGDETY+P+
Sbjct: 118 PRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPR 177

Query: 180 VVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAM 239
            + S+ EN  TMK GR EAS V+FGALDELFEKT+V+PKDVG+LVVNCSIFNPTPSLSAM
Sbjct: 178 SI-SSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAM 236

Query: 240 IINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRD 299
           +INHYKMRGNI+SYNLGGMGCSAG+I +DLARDMLQ+NPN+YAVVVSTEMVGYNWY G D
Sbjct: 237 VINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNWYVGSD 296

Query: 300 RSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359
           +SM+IPNCFFRMGCSA+++SNRRRD+  AKYRL+ IVRTH  ADDRSFRSVYQEEDEQGF
Sbjct: 297 KSMVIPNCFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVYQEEDEQGF 356

Query: 360 RGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKS------ 413
           +GLK+S+++ME+GG+ALKTNITTLGPLVLPFSEQL FFA L+ R  FS +A  S      
Sbjct: 357 KGLKISRDLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALL-RRTFSPAAKTSTTTSFS 415

Query: 414 ----------RSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASR 463
                     +SSS   +KPYIPDYKLAFEHFC HAASK VL+ELQKNL LSE+NMEASR
Sbjct: 416 TSATAKTNGIKSSSSDLSKPYIPDYKLAFEHFCFHAASKVVLEELQKNLGLSEENMEASR 475

Query: 464 MTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPAR 523
           MTLHRFGNTSSS IWYELAY+EAKE V+RGDRVWQIAFGSGFKCNSVVW+AMR+VKKP R
Sbjct: 476 MTLHRFGNTSSSGIWYELAYMEAKESVRRGDRVWQIAFGSGFKCNSVVWKAMRKVKKPTR 535

Query: 524 -NPWLDCVDRYPVAL 537
            NPW+DC++RYPV L
Sbjct: 536 NNPWVDCINRYPVPL 550
Contributes to cuticular wax and suberin biosynthesis. Prevents the postgenital fusion of epiderm cells in organs in contact, as well as ectopic pollen hydration and germination. Required during ovules formation. May regulates an epidermis-specific developmental program during gynoecial ontogeny.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1 Back     alignment and function description
>sp|Q5XEP9|KCS17_ARATH 3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG87|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query537
18447765535 fiddlehead-like protein [Gossypium hirsu 0.990 0.994 0.863 0.0
255550233532 acyltransferase, putative [Ricinus commu 0.986 0.996 0.842 0.0
356507127536 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.994 0.996 0.823 0.0
356514790535 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.988 0.992 0.825 0.0
449447191531 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.981 0.992 0.815 0.0
224092041533 beta-ketoacyl-coa synthase family protei 0.986 0.994 0.833 0.0
449522734531 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.981 0.992 0.812 0.0
225429736530 PREDICTED: 3-ketoacyl-CoA synthase 10 is 0.977 0.990 0.815 0.0
357465931537 3-ketoacyl-CoA synthase [Medicago trunca 0.996 0.996 0.791 0.0
28864534538 fiddlehead-like protein [Tropaeolum maju 1.0 0.998 0.814 0.0
>gi|18447765|gb|AAL67993.1| fiddlehead-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  987 bits (2551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/536 (86%), Positives = 507/536 (94%), Gaps = 4/536 (0%)

Query: 1   MARSERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINH 60
           MAR+E+DLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINH
Sbjct: 1   MARNEQDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINH 60

Query: 61  AIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRP 120
            IYLATIPVL+LVFSAEVGSLSREELW+KLWED R+DLA+VL FF VFVFT+SVYFMSRP
Sbjct: 61  GIYLATIPVLVLVFSAEVGSLSREELWKKLWEDARYDLATVLSFFAVFVFTVSVYFMSRP 120

Query: 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKV 180
           RS+YL+DFACYRP DDLKVT++QFIE+A    K DEASL+FQ++I+KSSGIGDETY+PKV
Sbjct: 121 RSIYLIDFACYRPHDDLKVTKDQFIELARASGKFDEASLEFQKKILKSSGIGDETYVPKV 180

Query: 181 VMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMI 240
           +MS +ENC TMK GRLEAS VMFGALDELFEKT++RPKDVG+LVVNCSIFNPTPSLSAMI
Sbjct: 181 IMS-KENCATMKEGRLEASTVMFGALDELFEKTRIRPKDVGVLVVNCSIFNPTPSLSAMI 239

Query: 241 INHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDR 300
           INHYKMRGNI+SYNLGGMGCSAG+I VDLARDMLQANPNNYAVVVSTEMVGYNWY GRDR
Sbjct: 240 INHYKMRGNILSYNLGGMGCSAGIIAVDLARDMLQANPNNYAVVVSTEMVGYNWYPGRDR 299

Query: 301 SMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFR 360
           SM++PNCFFRMGCSA+L+SNRRRDY RAKYRL+ +VRTH GADDRSFRS+YQEEDEQGF+
Sbjct: 300 SMLVPNCFFRMGCSAVLLSNRRRDYRRAKYRLEHLVRTHKGADDRSFRSIYQEEDEQGFK 359

Query: 361 GLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLAS 420
           GLKVSK++ EIGGDALKTNITTLGPLVLPFSEQLFFFATL+WRH F G  DKS++S   S
Sbjct: 360 GLKVSKDLTEIGGDALKTNITTLGPLVLPFSEQLFFFATLIWRHFFGG--DKSKTSLSPS 417

Query: 421 TKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYE 480
           +KPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSE NMEASRMTLHRFGNTSSSSIWYE
Sbjct: 418 SKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSENNMEASRMTLHRFGNTSSSSIWYE 477

Query: 481 LAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPAR-NPWLDCVDRYPV 535
           LAYLEAKERVKRGDR+WQIAFGSGFKCNSVVW++MRRV+KP+R NPWLDC+DRYPV
Sbjct: 478 LAYLEAKERVKRGDRIWQIAFGSGFKCNSVVWRSMRRVRKPSRDNPWLDCIDRYPV 533

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255550233|ref|XP_002516167.1| acyltransferase, putative [Ricinus communis] gi|223544653|gb|EEF46169.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507127|ref|XP_003522322.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Glycine max] Back     alignment and taxonomy information
>gi|356514790|ref|XP_003526086.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Glycine max] Back     alignment and taxonomy information
>gi|449447191|ref|XP_004141352.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224092041|ref|XP_002309451.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222855427|gb|EEE92974.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449522734|ref|XP_004168381.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225429736|ref|XP_002282234.1| PREDICTED: 3-ketoacyl-CoA synthase 10 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357465931|ref|XP_003603250.1| 3-ketoacyl-CoA synthase [Medicago truncatula] gi|355492298|gb|AES73501.1| 3-ketoacyl-CoA synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|28864534|gb|AAO47729.1| fiddlehead-like protein [Tropaeolum majus] gi|30144607|gb|AAP14903.1| fiddlehead-like protein [Tropaeolum majus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query537
TAIR|locus:2057706550 KCS10 "3-ketoacyl-CoA synthase 0.992 0.969 0.738 1.4e-220
TAIR|locus:2016397516 KCS4 "3-ketoacyl-CoA synthase 0.934 0.972 0.573 2.9e-158
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.931 0.976 0.554 1.2e-154
TAIR|locus:2043849509 KCS11 "3-ketoacyl-CoA synthase 0.903 0.952 0.565 2.9e-151
TAIR|locus:2170837529 KCS20 "3-ketoacyl-CoA synthase 0.901 0.914 0.560 5e-147
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.901 0.973 0.540 1.5e-145
TAIR|locus:2020215528 KCS2 "3-ketoacyl-CoA synthase 0.903 0.918 0.554 1.9e-145
TAIR|locus:2200955528 KCS1 "3-ketoacyl-CoA synthase 0.916 0.931 0.532 1.8e-142
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.877 0.967 0.541 1.5e-138
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.901 0.983 0.526 2.4e-138
TAIR|locus:2057706 KCS10 "3-ketoacyl-CoA synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2130 (754.9 bits), Expect = 1.4e-220, P = 1.4e-220
 Identities = 409/554 (73%), Positives = 467/554 (84%)

Query:     1 MARS-ERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLIN 59
             M RS E+DLLSTEIVNRGIE SGPNAGS TFSVRVRRRLPDFLQSVNLKYVKLGYHYLIN
Sbjct:     1 MGRSNEQDLLSTEIVNRGIEPSGPNAGSPTFSVRVRRRLPDFLQSVNLKYVKLGYHYLIN 60

Query:    60 HAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLAXXXXXXXXXXXXXXXYFMSR 119
             HA+YLATIPVL+LVFSAEVGSLSREE+W+KLW+   +DLA               YFMSR
Sbjct:    61 HAVYLATIPVLVLVFSAEVGSLSREEIWKKLWD---YDLATVIGFFGVFVLTACVYFMSR 117

Query:   120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPK 179
             PRSVYL+DFACY+PSD+ KVT+E+FIE+A K  K DE +L F++RI+++SGIGDETY+P+
Sbjct:   118 PRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPR 177

Query:   180 VVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAM 239
              + S+ EN  TMK GR EAS V+FGALDELFEKT+V+PKDVG+LVVNCSIFNPTPSLSAM
Sbjct:   178 SI-SSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAM 236

Query:   240 IINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRD 299
             +INHYKMRGNI+SYNLGGMGCSAG+I +DLARDMLQ+NPN+YAVVVSTEMVGYNWY G D
Sbjct:   237 VINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNWYVGSD 296

Query:   300 RSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359
             +SM+IPNCFFRMGCSA+++SNRRRD+  AKYRL+ IVRTH  ADDRSFRSVYQEEDEQGF
Sbjct:   297 KSMVIPNCFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVYQEEDEQGF 356

Query:   360 RGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHL-----------FXX 408
             +GLK+S+++ME+GG+ALKTNITTLGPLVLPFSEQL FFA L+ R             F  
Sbjct:   357 KGLKISRDLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALLRRTFSPAAKTSTTTSFST 416

Query:   409 XXXXXX----XXXXXXTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRM 464
                             +KPYIPDYKLAFEHFC HAASK VL+ELQKNL LSE+NMEASRM
Sbjct:   417 SATAKTNGIKSSSSDLSKPYIPDYKLAFEHFCFHAASKVVLEELQKNLGLSEENMEASRM 476

Query:   465 TLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARN 524
             TLHRFGNTSSS IWYELAY+EAKE V+RGDRVWQIAFGSGFKCNSVVW+AMR+VKKP RN
Sbjct:   477 TLHRFGNTSSSGIWYELAYMEAKESVRRGDRVWQIAFGSGFKCNSVVWKAMRKVKKPTRN 536

Query:   525 -PWLDCVDRYPVAL 537
              PW+DC++RYPV L
Sbjct:   537 NPWVDCINRYPVPL 550
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA;IMP
GO:0016020 "membrane" evidence=IEA;IDA
GO:0016746 "transferase activity, transferring acyl groups" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0009913 "epidermal cell differentiation" evidence=IMP
GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA;IMP
GO:0042335 "cuticle development" evidence=RCA;IMP
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0009409 "response to cold" evidence=IEP
GO:0009416 "response to light stimulus" evidence=IEP
GO:0080167 "response to karrikin" evidence=IEP
TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043849 KCS11 "3-ketoacyl-CoA synthase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170837 KCS20 "3-ketoacyl-CoA synthase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020215 KCS2 "3-ketoacyl-CoA synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200955 KCS1 "3-ketoacyl-CoA synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q570B4KCS10_ARATH2, ., 3, ., 1, ., -0.76570.99060.9672yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.963
3rd Layer2.3.1.1190.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00061514
beta-ketoacyl-coa synthase family protein (534 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 0.0
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 0.0
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 0.0
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 0.0
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 0.0
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 1e-163
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-138
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 7e-23
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 1e-14
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 1e-13
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 2e-12
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 4e-12
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 3e-11
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 2e-07
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 3e-07
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 5e-05
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 3e-04
PRK05963326 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protei 5e-04
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 8e-04
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 0.002
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information 
 Score =  660 bits (1705), Expect = 0.0
 Identities = 290/501 (57%), Positives = 375/501 (74%), Gaps = 15/501 (2%)

Query: 36  RRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTR 95
           R+LPDF +SV LKYVKLGYHYLI H +YL   P L++V +A++ + S ++L   LWE  +
Sbjct: 17  RKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSP-LVVVIAAQLSTFSIQDL-HDLWEHLK 74

Query: 96  HDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSD 155
            +L SV+    + VF  ++YF++RPR VYLVDF+CY+P D  K TR+ F++ +       
Sbjct: 75  FNLISVILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFT 134

Query: 156 EASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKV 215
           E +L+FQR+I++ SG+G+ TY+P+ V++   N   M   R EA  VMFGA+D+L  KT V
Sbjct: 135 EENLEFQRKILERSGLGESTYLPEAVLNVPPN-PCMAEARKEAETVMFGAIDQLLAKTSV 193

Query: 216 RPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275
           +PKD+GIL+VNCS+FNPTPSLSAM+INHYK+RGNI+SYNLGGMGCSAG+I +DLA+ +LQ
Sbjct: 194 KPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253

Query: 276 ANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLI 335
            +PN+YA+V+S E +  NWY G DRSM++ NC FRMG +AIL+SN+R D  R+KY+L   
Sbjct: 254 VHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHT 313

Query: 336 VRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLF 395
           VRTH GADD+ F  V QEED  G  G+ +SK++M + GDALKTNITTLGPLVLP SEQL 
Sbjct: 314 VRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLL 373

Query: 396 FFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELS 455
           FFATLV + LF               KPYIPD+KLAFEHFC+HA  + VLDEL+KNL+LS
Sbjct: 374 FFATLVGKKLFK-----------MKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLS 422

Query: 456 EKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAM 515
           + +ME SRMTL+RFGNTSSSS+WYELAY EAK R+K+GDR WQIAFGSGFKCNS VW+A+
Sbjct: 423 DWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 482

Query: 516 RRVK-KPARNPWLDCVDRYPV 535
           R V     +NPW+D +  +PV
Sbjct: 483 RTVNPAKEKNPWMDEIHEFPV 503

Length = 511
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|180328 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 537
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 99.97
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 99.97
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 99.97
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.96
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.93
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.81
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.8
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.7
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.7
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.63
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.62
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.61
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.56
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.55
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.5
PRK08304337 stage V sporulation protein AD; Validated 99.5
PRK09051394 beta-ketothiolase; Provisional 99.49
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.49
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.47
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.46
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.45
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.44
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.44
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.44
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.44
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.42
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.41
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.41
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.4
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.39
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.39
PRK06059399 lipid-transfer protein; Provisional 99.39
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.37
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.37
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.37
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.36
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.36
PRK05790393 putative acyltransferase; Provisional 99.35
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.34
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.34
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.32
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.3
PLN02287452 3-ketoacyl-CoA thiolase 99.27
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.27
PRK06158384 thiolase; Provisional 99.26
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.26
PRK08256391 lipid-transfer protein; Provisional 99.25
PRK06065392 acetyl-CoA acetyltransferase; Provisional 99.24
PLN02644394 acetyl-CoA C-acetyltransferase 99.23
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.23
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.23
PRK07851406 acetyl-CoA acetyltransferase; Provisional 99.22
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 99.22
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.22
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.22
PRK07516389 acetyl-CoA acetyltransferase; Provisional 99.21
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 99.19
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 99.19
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 99.19
PRK06504390 acetyl-CoA acetyltransferase; Provisional 99.18
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 99.18
cd00832399 CLF Chain-length factor (CLF) is a factor required 99.18
PRK06289403 acetyl-CoA acetyltransferase; Provisional 99.17
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.16
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 99.15
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.14
PRK08131401 acetyl-CoA acetyltransferase; Provisional 99.14
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 99.14
PRK12404334 stage V sporulation protein AD; Provisional 99.12
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.12
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 99.11
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 99.1
PRK06366388 acetyl-CoA acetyltransferase; Provisional 99.09
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 99.06
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 99.05
PRK06157398 acetyl-CoA acetyltransferase; Validated 99.04
PRK06365430 acetyl-CoA acetyltransferase; Provisional 99.04
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.03
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.02
PRK08257 498 acetyl-CoA acetyltransferase; Validated 99.01
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.97
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.9
PRK08170426 acetyl-CoA acetyltransferase; Provisional 98.89
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.87
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.86
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.81
PRK06066385 acetyl-CoA acetyltransferase; Provisional 98.73
PRK07855386 lipid-transfer protein; Provisional 98.65
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 98.56
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.53
PRK07937352 lipid-transfer protein; Provisional 98.46
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.44
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 98.36
COG3321 1061 Polyketide synthase modules and related proteins [ 98.25
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.18
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 98.17
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 97.93
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 97.74
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 96.98
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 96.78
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 96.23
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 94.56
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 93.72
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 93.43
PRK06025417 acetyl-CoA acetyltransferase; Provisional 93.25
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 92.83
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 91.73
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.68
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 90.06
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.95
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 89.76
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 89.59
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.07
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 88.77
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 87.96
PRK08170426 acetyl-CoA acetyltransferase; Provisional 87.86
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 87.81
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 87.24
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 87.11
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 86.87
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 86.8
PRK04262347 hypothetical protein; Provisional 86.34
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 85.83
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 85.66
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 85.64
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 85.46
PRK08242402 acetyl-CoA acetyltransferase; Validated 85.13
PRK06366388 acetyl-CoA acetyltransferase; Provisional 84.81
PRK06840339 hypothetical protein; Validated 84.62
PRK07850387 acetyl-CoA acetyltransferase; Provisional 84.11
PRK09052399 acetyl-CoA acetyltransferase; Provisional 83.97
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 83.78
PRK09051394 beta-ketothiolase; Provisional 83.29
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 82.33
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 80.91
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 80.77
PRK06690361 acetyl-CoA acetyltransferase; Provisional 80.38
PRK06205404 acetyl-CoA acetyltransferase; Provisional 80.13
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-117  Score=956.82  Aligned_cols=495  Identities=57%  Similarity=1.008  Sum_probs=468.5

Q ss_pred             cceecccccCCcccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHHhccCCHHHHHHHHHhh--hhhhhHHHHH
Q 009313           29 TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHA---IYLATIPVLLLVFSAEVGSLSREELWEKLWED--TRHDLASVLG  103 (537)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  103 (537)
                      .+++++|++||||++|||+||||+||||+++|.   ++++++|++ ++++.++.+++++|++ .+|..  ++++++++++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   94 (521)
T PLN02854         17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLT-IATLVQITGLEFDTVS-ELWSNQALHLDTATRLT   94 (521)
T ss_pred             ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHH-HHHHHHHhcCCHHHHH-HHHHHhhhHHhHHHHHH
Confidence            567789999999999999999999999999999   677889987 7788899999999987 78987  7888999999


Q ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccc
Q 009313          104 FFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMS  183 (537)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~  183 (537)
                      +++++++++++|+|+||++||++||+||+|++++++|.+.|+|+.+..|.|++++++||+||++|||||++||+|+..++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~  174 (521)
T PLN02854         95 GSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITS  174 (521)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccC
Confidence            98999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHH
Q 009313          184 AEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAG  263 (537)
Q Consensus       184 ~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~g  263 (537)
                      .| +..+|+++|+|++++++.|++++|+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+||
T Consensus       175 ~~-~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSgg  253 (521)
T PLN02854        175 RP-PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAG  253 (521)
T ss_pred             CC-CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhH
Confidence            88 77899999999999999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccC
Q 009313          264 VIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGAD  343 (537)
Q Consensus       264 l~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd  343 (537)
                      ++||++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.+++++++++|
T Consensus       254 l~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad  333 (521)
T PLN02854        254 LISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGAD  333 (521)
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeC
Confidence            99999999999999999999999999999999999999999999999999999999976444467899999999999999


Q ss_pred             CCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCC
Q 009313          344 DRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKP  423 (537)
Q Consensus       344 ~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~  423 (537)
                      ++.|+|+++++|+.|..|+++++|+|.+++++++.|++++||.|+|++|+++|+...+.+ .+.+          +|+++
T Consensus       334 ~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~-~L~~----------~gl~~  402 (521)
T PLN02854        334 DKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRR-KLLK----------AKVKP  402 (521)
T ss_pred             CCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHH-HHHH----------cCCCc
Confidence            999999999999888889999999999999999999999999999999999877776544 4443          78999


Q ss_pred             CCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEch
Q 009313          424 YIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGS  503 (537)
Q Consensus       424 y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGs  503 (537)
                      |+|||++||||||+||+|++++|+++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+
T Consensus       403 ~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGs  482 (521)
T PLN02854        403 YIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGS  482 (521)
T ss_pred             cCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhheeEEEeccCCCC--CCCCcccccccCCCCC
Q 009313          504 GFKCNSVVWQAMRRVKKP--ARNPWLDCVDRYPVAL  537 (537)
Q Consensus       504 G~~~~s~v~r~~~~~~~~--~~~~w~~~~~~~p~~~  537 (537)
                      ||+||++||||+|++++.  .+|||+||||+|||++
T Consensus       483 Gft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~  518 (521)
T PLN02854        483 GFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKV  518 (521)
T ss_pred             hhhhhheeeEEeccCCccccCCCCchhhHhhCCCCC
Confidence            999999999999998865  5799999999999975

>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 7e-08
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 2e-07
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 4e-05
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 4e-05
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 9e-05
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 9e-05
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 4e-04
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 4e-04
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 5e-04
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 9e-04
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 6e-04
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure 
Iteration: 1

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 118/314 (37%), Gaps = 50/314 (15%)
Query: 216 RPK-DVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274
           RP  D+  LVV  +     P +   ++    +R ++    L   GC AG   + LA+D+ 
Sbjct: 143 RPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 202
Query: 275 QANPNNYAVVVSTEMVGYNWYAGRD----RSMMIPNCFFRMGCSAILMSNRRRDYHRAKY 330
           + +     +VV+ E+    ++ G D    R++++    F  G +A+++     D  R  +
Sbjct: 203 ENSRGARVLVVAAELT-LMYFTGPDEGCFRTLLV-QGLFGDGAAAVIVGADADDVERPLF 260
Query: 331 RLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPF 390
            +    +T     D +    + E    G  G +V   I    GD ++  +  +      F
Sbjct: 261 EIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLI----GDNVERCLLDM------F 310
Query: 391 SEQLFFFATLVWRHLFXXXXXXXXXXXXXXTKPYIPDYKLAFEHFCVHAASKTVLDELQK 450
              L       W  LF                            + VH  S T++D++  
Sbjct: 311 GPLLGGDGGGGWNDLF----------------------------WAVHPGSSTIMDQVDA 342
Query: 451 NLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVW-----QIAFGSGF 505
            L L    + ASR  L  +GN S +++ + L  L  + +       W      +AFG G 
Sbjct: 343 ALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMMAFGPGM 402
Query: 506 KCNSVVWQAMRRVK 519
             ++++  A   V 
Sbjct: 403 TVDAMLLHATSHVN 416
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 1e-101
3oit_A387 OS07G0271500 protein; type III polyketide synthase 3e-91
3awk_A402 Chalcone synthase-like polyketide synthase; type I 3e-66
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 5e-62
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 7e-60
3v7i_A413 Putative polyketide synthase; type III polyketide 7e-56
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 6e-52
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 3e-51
1xes_A413 Dihydropinosylvin synthase; native structure, tran 7e-50
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 7e-45
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 9e-43
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 2e-36
1u0m_A382 Putative polyketide synthase; type III polyketide 2e-31
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 7e-28
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 5e-13
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-10
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 3e-08
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 5e-08
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 9e-08
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 9e-08
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 2e-07
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 2e-07
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 6e-07
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 6e-07
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 1e-06
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 1e-06
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 1e-06
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 2e-06
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 2e-06
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 2e-06
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 2e-06
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 2e-06
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 2e-06
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 4e-06
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 4e-06
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 1e-05
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 1e-05
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 1e-04
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 8e-04
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  309 bits (792), Expect = e-101
 Identities = 56/386 (14%), Positives = 132/386 (34%), Gaps = 47/386 (12%)

Query: 138 KVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGI-----GDETYIPKVVMSAEENCMT-- 190
            ++++   +           + +  +RI + S I       +   P+  +          
Sbjct: 27  PISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITD 86

Query: 191 -MKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGN 249
                +     +   A     +       D+  +V   S     P ++  +I+   +  +
Sbjct: 87  VNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKD 146

Query: 250 IISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFF 309
           +   +L  MGC AG+  +  A  + +A+P N  +VV TE+   ++        M+ +  F
Sbjct: 147 VERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIF 206

Query: 310 RMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIM 369
             G +A ++    R      Y +   +       + +   +  + +++G+  L +  +I 
Sbjct: 207 ADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENA---MVWDLEKEGWN-LGLDASIP 262

Query: 370 EIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYK 429
            + G  ++  + TL                              ++    ST     D  
Sbjct: 263 IVIGSGIEAFVDTLLD----------------------------KAKLQTSTAISAKDC- 293

Query: 430 LAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKER 489
                F +H   K++L  ++ +L +  K  + +    H +GN SS+S+ + + +    + 
Sbjct: 294 ----EFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK- 348

Query: 490 VKRGDRVWQIAFGSGFKCNSVVWQAM 515
                    +AFG G        + +
Sbjct: 349 -SLPTYSISLAFGPGLAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query537
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.86
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.78
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.78
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.77
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.77
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.76
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.76
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.76
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.75
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.75
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.73
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.71
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.71
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.71
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.69
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.69
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.68
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.67
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.67
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.65
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.65
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.65
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.64
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.64
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.63
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.61
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.6
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.6
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.59
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.59
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.58
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.54
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.53
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.48
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.18
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 98.97
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.78
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 98.09
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 98.05
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 97.92
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 92.66
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 91.52
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 91.43
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 91.16
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 90.54
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 90.08
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 89.84
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 89.37
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 88.99
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 88.96
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 88.64
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 88.63
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 88.54
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 88.53
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 88.5
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 88.28
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 87.66
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 87.55
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 87.16
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 86.11
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 85.4
1u0m_A382 Putative polyketide synthase; type III polyketide 84.77
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 84.39
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 81.79
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 81.5
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 81.22
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=3.3e-56  Score=463.97  Aligned_cols=327  Identities=21%  Similarity=0.294  Sum_probs=258.6

Q ss_pred             cCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhh
Q 009313          118 SRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLE  197 (537)
Q Consensus       118 ~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~e  197 (537)
                      .||...+|+++|.|+|+  +++||+|+.+.++.    +++      ||.+|+||++||++.++++     ..+|      
T Consensus         9 ~~~~~srI~g~g~ylP~--~~v~n~el~~~~~~----~~e------~I~~rtGI~~R~~a~~~e~-----~~~l------   65 (350)
T 4ewp_A            9 ERPAASRIVAVGAYRPA--NLVPNEDLIGPIDS----SDE------WIRQRTGIVTRQRATAEET-----VPVM------   65 (350)
T ss_dssp             CCCSEEEEEEEEEECCS--CEEEHHHHTTTTTC----CHH------HHHHHHCCSEEECCCSSCC-----HHHH------
T ss_pred             cCCCCCEEEEEEEEcCC--CeEcHHHHHHHhCC----CHH------HHHhccCceEEEEcCCCCC-----HHHH------
Confidence            47888999999999999  99999999876653    453      7899999999999987653     4566      


Q ss_pred             HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313          198 ASMVMFGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA  276 (537)
Q Consensus       198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~  276 (537)
                          +.+|+++||+++|++|+|||+||++| ++++..|+++++|+++||++ ++.+||++ +||+|++.||++|.+++++
T Consensus        66 ----a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~  139 (350)
T 4ewp_A           66 ----AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRS  139 (350)
T ss_dssp             ----HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred             ----HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhC
Confidence                49999999999999999999999986 56889999999999999998 57899999 7999999999999999999


Q ss_pred             CCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccc
Q 009313          277 NPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDE  356 (537)
Q Consensus       277 g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~  356 (537)
                      ++.++||||++|.+|. +.++.||.   +..+|||||+|+||++.+...         +....+++|++.++.+..+...
T Consensus       140 g~~~~~Lvv~~E~~s~-~~d~~~~~---~~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~  206 (350)
T 4ewp_A          140 GTARHVLVVGVERLSD-VVDPTDRS---ISFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQ  206 (350)
T ss_dssp             TSCSEEEEEEEEEGGG-GCCTTCTT---TGGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCH
T ss_pred             CCccceeEeeeeecee-cccccccc---cccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCc
Confidence            9999999999999998 55667877   478999999999999876531         2234456777777766554321


Q ss_pred             ccccccccchhhhhhhc---------ccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhccccc-----ccCCC
Q 009313          357 QGFRGLKVSKNIMEIGG---------DALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSS-----LASTK  422 (537)
Q Consensus       357 ~G~~g~~ls~dl~~~~g---------~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~-----~~gl~  422 (537)
                      .   ...-..+.....+         .....++.+.|                  +++++.+++.+++.+     ++|++
T Consensus       207 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------------------~~v~~~a~~~~~~~i~~~L~~~gl~  265 (350)
T 4ewp_A          207 L---ELRDAVEHARTTGDASAITGAEGMLWPTLRQDG------------------PSVFRWAVWSMAKVAREALDAAGVE  265 (350)
T ss_dssp             H---HHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECH------------------HHHHHHHHHTHHHHHHHHHHHHTCC
T ss_pred             c---ccCcccccccccCCccccccccccccceeEehh------------------HHHHHHHHHhhhHHHHHHHHhhcCC
Confidence            0   0000000000000         00111222222                  333333332222222     27888


Q ss_pred             CCCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEc
Q 009313          423 PYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFG  502 (537)
Q Consensus       423 ~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafG  502 (537)
                      +      +|||||++||+|+++++.+++.||++++++.  ..++++||||||||+|+.|++++++|++++||+|+++|||
T Consensus       266 ~------~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG  337 (350)
T 4ewp_A          266 P------EDLAAFIPHQANMRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFG  337 (350)
T ss_dssp             G------GGEEEEEECCSCHHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEE
T ss_pred             h------hHhceEEecCCCHHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEc
Confidence            7      9999999999999999999999999999985  3689999999999999999999999999999999999999


Q ss_pred             hHHHhhheeEEEe
Q 009313          503 SGFKCNSVVWQAM  515 (537)
Q Consensus       503 sG~~~~s~v~r~~  515 (537)
                      +||+|+++||||.
T Consensus       338 ~G~t~~~~vlr~P  350 (350)
T 4ewp_A          338 AGLVYGAQVVRLP  350 (350)
T ss_dssp             TTTEEEEEEEECC
T ss_pred             hhhEeEEEEEEeC
Confidence            9999999999983
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 537
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 1e-42
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 3e-29
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 2e-20
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 5e-18
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 3e-17
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 6e-17
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 3e-11
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 3e-11
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 2e-10
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 3e-09
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  154 bits (390), Expect = 1e-42
 Identities = 55/390 (14%), Positives = 127/390 (32%), Gaps = 52/390 (13%)

Query: 138 KVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLE 197
            V +    +   +             R+ + S I     +    + A+ +    +   + 
Sbjct: 25  VVNQSDAADRVAELFLDPGQRERI-PRVYQKSRI-TTRRMAVDPLDAKFDVFRREPATIR 82

Query: 198 ASMVMFG---------ALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRG 248
             M +F                     R  ++G+LV+  S     P +   I+    +  
Sbjct: 83  DRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSP 142

Query: 249 NIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCF 308
           +I    +  MGC+A +  +  A + ++A+P   A+VV  E+   N     D + ++ +  
Sbjct: 143 SISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSL 202

Query: 309 FRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNI 368
           F  GC+A+++   +        ++ +        D+ +   +    +  G          
Sbjct: 203 FGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDN-TEDGIVLGVNHNGI--------T 253

Query: 369 MEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDY 428
            E+  +      + + P+V           +                             
Sbjct: 254 CELSENLPGYIFSGVAPVVTEMLWDNGLQIS----------------------------- 284

Query: 429 KLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKE 488
               + + +H     ++++  ++L +S +    S   L RFGN  S S+ + L  +  + 
Sbjct: 285 --DIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQA 342

Query: 489 RVKRG-DRVWQIAFGSGFKCNSVVWQAMRR 517
              +        AFG G     +++  +RR
Sbjct: 343 ESAKAISTGVAFAFGPGVTVEGMLFDIIRR 372
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query537
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.97
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.97
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.97
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.97
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.96
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.94
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.9
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.88
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.88
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.87
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.86
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.86
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.86
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.86
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 99.11
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 99.03
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 99.02
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.89
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.85
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.83
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.71
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.7
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.62
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.58
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.51
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 98.47
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.44
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.42
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 95.68
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 94.75
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 94.36
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 93.69
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 92.82
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 91.28
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 89.29
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 87.18
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 86.24
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 85.83
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 82.97
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 82.66
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=8.2e-52  Score=432.19  Aligned_cols=350  Identities=16%  Similarity=0.182  Sum_probs=264.0

Q ss_pred             ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccc-----ccc---ccchhhh
Q 009313          122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMS-----AEE---NCMTMKH  193 (537)
Q Consensus       122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~-----~p~---~~~~ma~  193 (537)
                      ..+|.++|+|+|+  ++|+|+|+.+.++.... +++..+.+.+|++++||++||++.+....     .++   ....++.
T Consensus        11 ~a~I~g~g~~~P~--~~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~   87 (372)
T d1teda_          11 VAVIEGLATGTPR--RVVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL   87 (372)
T ss_dssp             EEEEEEEEEECCS--CEEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred             eEEEEEEEEeCCC--eEEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHH
Confidence            4789999999999  99999999999875432 22334556789999999999987543221     111   1124556


Q ss_pred             hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHH
Q 009313          194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDM  273 (537)
Q Consensus       194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~l  273 (537)
                      +.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++..++++++||+|++.||++|.++
T Consensus        88 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~  167 (372)
T d1teda_          88 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  167 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence            67889999999999999999999999999999988888999999999999999988999999878999999999999999


Q ss_pred             HHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCcccccc--ceeeeeEEEEEeccCCCccccce
Q 009313          274 LQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRA--KYRLQLIVRTHTGADDRSFRSVY  351 (537)
Q Consensus       274 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~--~~~L~~~v~t~~~sd~~~~~~v~  351 (537)
                      |++++.++||||++|.+|.++...++.....+.++|||||+|+||++++......  .+.+.... ++...+.  .+...
T Consensus       168 l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~  244 (372)
T d1teda_         168 VRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSF-SQLLDNT--EDGIV  244 (372)
T ss_dssp             HHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEE-EEECTTC--TTSEE
T ss_pred             HhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEeccc-ccccCCC--ccccc
Confidence            9999999999999999988665444444334678999999999999876532211  12111111 1111111  11111


Q ss_pred             eccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCcccc
Q 009313          352 QEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLA  431 (537)
Q Consensus       352 ~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~d  431 (537)
                      ...++ +..-+..+++++....                      ..+....++++++          +|+++      +|
T Consensus       245 ~~~~~-~~~~~~~~~~~~~~~~----------------------~~~~~~i~~~L~~----------~gl~~------~d  285 (372)
T d1teda_         245 LGVNH-NGITCELSENLPGYIF----------------------SGVAPVVTEMLWD----------NGLQI------SD  285 (372)
T ss_dssp             EEEET-TEEEEEECTTHHHHHH----------------------HHHHHHHHHHHHH----------TTCCG------GG
T ss_pred             cCCCC-CcceeechHHHHHHHH----------------------HHHHHHHHHHHHh----------cCCCH------HH
Confidence            11111 1111111111111100                      0111223455554          88987      99


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCC-CEEEEEEEchHHHhhhe
Q 009313          432 FEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRG-DRVWQIAFGSGFKCNSV  510 (537)
Q Consensus       432 id~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~G-d~VlliafGsG~~~~s~  510 (537)
                      ||+|++||+|+++++.+++.||++++++..|+.++.+||||+|+|+|+.|++++++|++.+| |++++++||+|++|+++
T Consensus       286 id~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~  365 (372)
T d1teda_         286 IDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGM  365 (372)
T ss_dssp             CSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEE
T ss_pred             hhhhhccCccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHH
Confidence            99999999999999999999999999998888899999999999999999999999998776 89999999999999999


Q ss_pred             eEEEec
Q 009313          511 VWQAMR  516 (537)
Q Consensus       511 v~r~~~  516 (537)
                      ||++++
T Consensus       366 ll~~~~  371 (372)
T d1teda_         366 LFDIIR  371 (372)
T ss_dssp             EEEECC
T ss_pred             hheeec
Confidence            999987
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure