Citrus Sinensis ID: 009389

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530------
Protein Sequence
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccEEEEEccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHccccccccccEEEEEEEEEEEccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEEEcccccccccHccccccccEEEEEccccccccccccccccccccEEEEcccccEEccccEEEEEEEEEEEEcccccccccccEEEEEEEcccHHccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccEEEEEEEEEEccEEEccccccccccccccEEEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEcc
Coil and Loop (DISEMBL)
mgrefastslapgfrfhptdEELVRYYLKRKVchrslrfnpicvtdiyksepwdlpdksslktrdkEWYFFSMLdkkygngsrtnratekgywkttgkdrpvhhntrtvgMKKTLVYhmgraphgertnwVMHEYRLtdddlekagvaQDTFVLCRIFqksgsgpkngeqygavdaalvpghdvvadelvvsddayfetndldqnidvanqsenaprhlnfyhgessnhvehsrdlspdnqkpmigvgatqhnselmdarpvkdeyidssngvnaggvnyflnepyldatdnpqfsdglyleandlsstveadsqgFDMVEEYLNFfdanddnseyltfdaseilgsgdnnsdqvplttevTEVTDQMSMAGQHQvevhgndvastseqkpdivksesdvkypFLKQASQMLGNvaaapafasefptkDAALRLnslahpsssvhvtAGMIRIRNItlsgsgldwsvgkngdmnIVFSFdlsqnvispsptsfepagnifsgktgSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Flexible Loop (DISEMBL)
mgrefastslapgfrfhptdEELVRYYLKRkvchrslrfnpicvtdiyksepwdlpdksslktrdkEWYFFSMldkkygngsrtnratekgywkttgkdrpvhhntrtvgmkktlVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEIlgsgdnnsdqvPLTTEVTEVTDQMSMAGQHQVEVHGndvastseqkpdivkseSDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Low Complexity Region (SEG)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGsvvfrslwlllflwiiilsvGFKIGACVSAK
Disordered region (IsUnstruct)
************GFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPD***LKTRDKEWYFFSMLDKKYGN*********KGYWKTTGK*RPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK*********QYGAVDAALVPGHDVVADELVVSDDAYFETNDLDQNI****************************************************************NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDA**************************************************************F*******LGNVAAAPAFA********ALRLN*L****SSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVIS*****FEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACV***
Disordered Region (DISOPRED)
************GFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRL*************TFVLCRIFQK**********************************************************************************************************I**SNGVNAGGVNYFLN***************************************YLNFFDANDDNSE********************************************************************FLKQASQMLGNVAAAPAFASEF*************************IRI***************KNGDMNIVFSFDL*****************IFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Disordered Region (DISEMBL)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGE*************DNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Disordered Region (DISPRO)
********SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSG**************************************************************************************************PVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVT********************************KSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQN***************FSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	536	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	yes	no	0.953	0.901	0.469	1e-128
Q7GCL7	489	NAC domain-containing pro	no	no	0.300	0.329	0.490	3e-45
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.281	0.442	0.513	6e-45
Q9FLJ2	336	NAC domain-containing pro	no	no	0.298	0.476	0.529	1e-44
Q52QH4	318	NAC domain-containing pro	no	no	0.285	0.481	0.527	8e-43
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.272	0.478	0.506	1e-42
Q5Z6B6	276	NAC domain-containing pro	no	no	0.285	0.554	0.506	1e-42
Q39013	289	NAC domain-containing pro	no	no	0.352	0.653	0.453	3e-42
Q9MA17	371	Protein SOMBRERO OS=Arabi	no	no	0.277	0.401	0.506	3e-42
Q8H4S4	425	NAC transcription factor	no	no	0.313	0.395	0.448	7e-42

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/592 (46%), Positives = 357/592 (60%), Gaps = 81/592 (13%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV------ 174
           RAP GERTNWVMHEYRL+D+DL+KAGV Q+ +VLCRIFQKSG+GPKNGEQYGA       
Sbjct: 120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEW 179

Query: 175 ---DAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVE 231
                  VP  D  ++ L ++DD Y + +D+D+  +     +  P   N+ HGESSN+VE
Sbjct: 180 EEDGMTYVPAQDAFSEGLALNDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSNNVE 239

Query: 232 ------HSRDLSPDN-------------------QKPMIGVGATQHNSELMDAR---PVK 263
                     + P N                   +KP+I  G+ Q  S   + +    V+
Sbjct: 240 SGNYSDSGNYIQPGNNVVDSGGYFEQPIETFEEDRKPIIREGSIQPCSLFPEEQIGCGVQ 299

Query: 264 DEYI----DSSNGVNAGGV---------NYFLNEPYLDATDNPQFSDGLYLEANDLSSTV 310
           DE +     S+N V              NY  +EP++D  +N   +DGLYLE NDLS   
Sbjct: 300 DENVVNLESSNNNVFVADTCYSDIPIDHNYLPDEPFMDPNNNLPLNDGLYLETNDLSCAQ 359

Query: 311 EADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGD-----NNSDQVPLTTEVTEVT 365
           + D       E+YL+FFD      E LTFD S ++G  D        DQ P   E+    
Sbjct: 360 QDDFN----FEDYLSFFD-----DEGLTFDDSLLMGPEDFLPNQEALDQKPAPKEL---- 406

Query: 366 DQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEF 425
           ++    G+  VE   +   S+S+Q  D    +S  KYPFLK+ S MLG +    +FAS+F
Sbjct: 407 EKEVAGGKEAVEEKESGEGSSSKQDTDFKDFDSAPKYPFLKKTSHMLGAIPTPSSFASQF 466

Query: 426 PTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSG-SGLDWSVGKNGDMNIVFSFDLSQN 484
            TKD A+RL++ A  S SVHVTAGM+RI N+TL+  SG+ WS  KNG++N+V SF + Q 
Sbjct: 467 QTKD-AMRLHA-AQSSGSVHVTAGMMRISNMTLAADSGMGWSYDKNGNLNVVLSFGVVQQ 524

Query: 485 VISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 536
                    + A      KTG    R++ + + LW+++LSV FKI   VSA+
Sbjct: 525 ---------DDAMTASGSKTGITATRAMLVFMCLWVLLLSVSFKIVTMVSAR 567

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  183 bits (465), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 79/161 (49%), Positives = 109/161 (67%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGF FHP D EL+ +YLK+K+  + + +  I   DIYK EPWDLP K  + T+D +W+
Sbjct: 9   LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWH 68

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
           FF+  D+KY NGSR+NRAT  GYWK+TGKDR +    +T+G KKTLV+H GR P G RT 
Sbjct: 69  FFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTE 128

Query: 130 WVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQ 170
           W+MHEY + + + +     +D +VLCRI +++   P NG +
Sbjct: 129 WIMHEYYIDERECQACPDMKDAYVLCRITKRNDWIPGNGNE 169

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  182 bits (462), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 110/152 (72%), Gaps = 1/152 (0%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEW 68
           + PGFRFHPTDEEL+ YYLK+K+ ++      I   D+ K EPWDL ++  +  T   EW
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEW 68

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY  GSRTNRAT  G+WK TG+D+ + ++ + +GM+KTLV++ GRAPHG++T
Sbjct: 69  YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 128

Query: 129 NWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 160
           +W+MHEYRL D D  +A  ++D +V+CR+F K
Sbjct: 129 DWIMHEYRLEDADDPQANPSEDGWVVCRVFMK 160

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  181 bits (459), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/168 (52%), Positives = 113/168 (67%), Gaps = 8/168 (4%)

Query: 3   REFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLK 62
           +E     L PGFRFHPTDEEL+ +YL +KV   S     I   D+ KSEPW+LP  +  K
Sbjct: 9   KEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA--K 66

Query: 63  TRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRA 122
             +KEWYFF + D+KY  G RTNRATE GYWK TGKD+ ++     VGMKKTLV++ GRA
Sbjct: 67  MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRA 126

Query: 123 PHGERTNWVMHEYRL----TDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           P G++TNWVMHEYRL    +  +L K   A++ +V+CR+FQKS  G K
Sbjct: 127 PKGQKTNWVMHEYRLEGKFSAHNLPK--TAKNEWVICRVFQKSAGGKK 172

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  175 bits (444), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 85/161 (52%), Positives = 108/161 (67%), Gaps = 8/161 (4%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTDEELV +YL RKV  + L    I   D+YK +PWDLP+K+      
Sbjct: 17  AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGR-- 74

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV--HHNTRTVGMKKTLVYHMGRAP 123
           KEWYFF+  D+KY NGSR NRA  +GYWK TG D+PV    + RTVG+KK LV++ G+AP
Sbjct: 75  KEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAP 134

Query: 124 HGERTNWVMHEYRLTDDDL----EKAGVAQDTFVLCRIFQK 160
            G +T+W+MHEYRL D D     +K     D +VLCR++ K
Sbjct: 135 RGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNK 175

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 109/154 (70%), Gaps = 8/154 (5%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEW 68
           + PGFRFHPTDEEL+ YYLK+K+ +       I   D+ K EPWDL D+  +  T   EW
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY  GSRTNRAT  G+WK TG+D+ + ++ + +GM+KTLV++ GRAPHG++T
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 127

Query: 129 NWVMHEYRL--TDDDLEKAGVAQDTFVLCRIFQK 160
           +W+MHEYR+  T+DD       +D +V+CR+F+K
Sbjct: 128 DWIMHEYRIEDTEDD-----PCEDGWVVCRVFKK 156

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score =  174 bits (441), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 114/158 (72%), Gaps = 5/158 (3%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
            + S+ PGFRFHPTDEEL+ YYL++KV + ++  + I   D+ K EPWDL D+  + T  
Sbjct: 6   GALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGP 65

Query: 66  K-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH-HNTRTVGMKKTLVYHMGRAP 123
           + EWYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +   N   +GM+KTLV+++GRAP
Sbjct: 66  QNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAP 125

Query: 124 HGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKS 161
           HG++T+W+MHEYRL  D+++   V +D +V+CR+F K 
Sbjct: 126 HGKKTDWIMHEYRLDQDNVD---VQEDGWVVCRVFMKK 160

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  173 bits (439), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/203 (45%), Positives = 123/203 (60%), Gaps = 14/203 (6%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGFRFHPTDEELV +YL RK   +S+    I   D+YK +PW+LP  +     +KEWY
Sbjct: 7   LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYG--EKEWY 64

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
           FFS  D+KY NGSR NR+   GYWK TG D+P+    + VG+KK LV++ G+AP GE+TN
Sbjct: 65  FFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGL-PKPVGIKKALVFYAGKAPKGEKTN 123

Query: 130 WVMHEYRLTDDDL----EKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAVDAALVPGHDVV 185
           W+MHEYRL D D     +K  +  D +VLCRI+ K G+  + G     V    +      
Sbjct: 124 WIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEEKPK 183

Query: 186 ADELVV-------SDDAYFETND 201
             E+V+       S+ AYF+T+D
Sbjct: 184 VTEMVMPPPPQQTSEFAYFDTSD 206

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MA17|SMB_ARATH Protein SOMBRERO OS=Arabidopsis thaliana GN=SMB PE=1 SV=1

 Score =  173 bits (438), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 113/154 (73%), Gaps = 5/154 (3%)

Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDK-E 67
           S+ PGFRFHPT+EEL+ YYLK+KV +  +  + I   D+ K EPW+L +K  + +  + E
Sbjct: 16  SVPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGPQNE 75

Query: 68  WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN-TRTVGMKKTLVYHMGRAPHGE 126
           WYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +H N ++ +G++KTLV++ GRAPHG+
Sbjct: 76  WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQ 135

Query: 127 RTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 160
           +T W+MHEYRL D + E   + +D +V+CR+F+K
Sbjct: 136 KTEWIMHEYRLDDSENE---IQEDGWVVCRVFKK 166

Transcription regulator. Together with BRN1 and BRN2, regulates cellular maturation of root cap. Represses stem cell-like divisions in the root cap daughter cells, and thus promotes daughter cell fate. Inhibits expression of its positive regulator FEZ in a feedback loop for controlled switches in cell division plane. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  172 bits (435), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 88/196 (44%), Positives = 118/196 (60%), Gaps = 28/196 (14%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGFRFHPTDEELV +YLK+K     L    I   D+YK +PWDLP+K++    ++EWY
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFG--EQEWY 86

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRT---VGMKKTLVYHMGRAPHGE 126
           FFS  D+KY NG+R NRA   GYWK TG D+P+  +  T   VG+KK LV++ G+ P G 
Sbjct: 87  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGV 146

Query: 127 RTNWVMHEYRLTDDDLEKAGVAQ--------------------DTFVLCRIFQKS---GS 163
           +TNW+MHEYRLTD     A VA                     D +VLCRI++K+   G+
Sbjct: 147 KTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKAGA 206

Query: 164 GPKNGEQYGAVDAALV 179
           G ++ E   +V+ A+ 
Sbjct: 207 GQRSMECEDSVEDAVA 222

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
255583748	514	conserved hypothetical protein [Ricinus	0.891	0.929	0.579	1e-173
224109872	551	NAC domain protein, IPR003441 [Populus t	0.968	0.941	0.563	1e-168
359486687	559	PREDICTED: NAC domain-containing protein	0.990	0.949	0.540	1e-166
224100709	565	NAC domain protein, IPR003441 [Populus t	0.958	0.909	0.540	1e-162
147802301	573	hypothetical protein VITISV_021988 [Viti	0.968	0.905	0.543	1e-161
302399033	607	NAC domain class transcription factor [M	0.977	0.863	0.514	1e-157
449532398	566	PREDICTED: NAC domain-containing protein	0.979	0.927	0.511	1e-149
449449383	524	PREDICTED: NAC domain-containing protein	0.893	0.914	0.540	1e-143
449465328	555	PREDICTED: NAC domain-containing protein	0.972	0.938	0.523	1e-141
297829590	560	ANAC053 [Arabidopsis lyrata subsp. lyrat	0.942	0.901	0.482	1e-131

>gi|255583748|ref|XP_002532627.1| conserved hypothetical protein [Ricinus communis] gi|223527647|gb|EEF29758.1| conserved hypothetical protein [Ricinus communis]

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 325/561 (57%), Positives = 391/561 (69%), Gaps = 83/561 (14%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           ++ SLAPGFRFHPTDEELVRYYLKRKV ++  RF+ I V DIYK+EPWDLPDKS LKTRD
Sbjct: 7   SAASLAPGFRFHPTDEELVRYYLKRKVTNKPFRFDAIAVVDIYKTEPWDLPDKSKLKTRD 66

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFFSMLDKKYGNGS+TNRATEKGYWKTTGKDRPV  N+R VGMKKTLVYH+GRAP G
Sbjct: 67  LEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPVRWNSRNVGMKKTLVYHLGRAPRG 126

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV----------D 175
           ERTNWVMHEYRLTD+DLEKAG+ QD FVLCRIFQKSG+GPKNGEQYGA           +
Sbjct: 127 ERTNWVMHEYRLTDEDLEKAGIVQDAFVLCRIFQKSGTGPKNGEQYGAPFVEEEWDNDDE 186

Query: 176 AALVPGHDVV-ADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSR 234
             L+PG ++V  DELV+ DDAY ETNDLDQN DVA  S+NA   +NFYHGE+SN+VE S 
Sbjct: 187 VVLLPGEEMVMTDELVLGDDAYGETNDLDQNFDVAVVSDNAALPVNFYHGETSNYVEQSG 246

Query: 235 DLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDEYI-DSSNGVNAGGVN 279
           + S D++KP+I  G  Q+ S+L              +DA+ V+ EYI +SSN V+A   N
Sbjct: 247 NSSGDDKKPVIDRGGAQYCSDLPDDKVLFSFPEQYEIDAKSVRHEYIAESSNNVDATDDN 306

Query: 280 YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQG----FDMVEEYLNFFDANDDNSE 335
           Y L+EP+LDATDNP F++GL+LEANDLS+ VE ++ G    F+MV+EYLNFFDANDDN  
Sbjct: 307 YLLDEPFLDATDNPPFNEGLFLEANDLSNPVEPETAGDSTIFEMVDEYLNFFDANDDN-- 364

Query: 336 YLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVK 395
            LTFD SEILGS +  SD   L+                                     
Sbjct: 365 -LTFDPSEILGSENIVSDGASLS------------------------------------- 386

Query: 396 SESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRN 455
                     ++AS MLG++ A PAFASEFP K  AL+LN  A  SSS+ VTAGMIRI +
Sbjct: 387 ----------EKASHMLGSIPAPPAFASEFPLKGTALQLNG-APSSSSIRVTAGMIRIES 435

Query: 456 ITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLL 515
           IT    G+DWS GKNG++NIV SF +SQ  +SP+ ++  PAGN FSGKT S+V R  + L
Sbjct: 436 ITFGSDGMDWSFGKNGNVNIVLSFVMSQGNVSPAGSA--PAGNSFSGKTWSLVSRGWFFL 493

Query: 516 LFLWIIILSVGFKIGACVSAK 536
           +F W++ILSV +KIG  +S K
Sbjct: 494 MFFWVLILSVSYKIGTYISTK 514

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109872|ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222864378|gb|EEF01509.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 317/563 (56%), Positives = 389/563 (69%), Gaps = 44/563 (7%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           ++TSLAPGFRFHPTDEELVRYYLKRKV ++  R + I VTD+YKSEPWDLP KS LK+RD
Sbjct: 1   SATSLAPGFRFHPTDEELVRYYLKRKVTNKPFRLDAISVTDVYKSEPWDLPVKSKLKSRD 60

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFFSMLDKKYGNG++TNRATEKGYWKTTGKDRP++ N+R VGMKKTLVYH GRAP G
Sbjct: 61  LEWYFFSMLDKKYGNGAKTNRATEKGYWKTTGKDRPINWNSRVVGMKKTLVYHQGRAPRG 120

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV---------DA 176
           ER+NWVMHEYRL D++LEKAG+AQD FVLCRIFQKSG+GPKNGEQYGA          + 
Sbjct: 121 ERSNWVMHEYRLADEELEKAGIAQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWENDEV 180

Query: 177 ALVPGHDVV-ADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRD 235
            L+P  ++V A E  V D +Y E N+LDQN D    SEN    LNFY+GE+SNHVE   +
Sbjct: 181 PLLPSEEMVPAGEAPVGDGSYLELNELDQNFDSGITSENTALPLNFYYGETSNHVEQPSN 240

Query: 236 LSPDNQKPMIGVGATQHNSEL--------------MDARPVKDEYIDSSNGVNAGGVNYF 281
            S ++ KP+I  GA   N                 MDA   K+   +  N VNA   NY 
Sbjct: 241 FSDNDIKPVI-RGAENRNGPAPPADQNLDLPGQYEMDAD-KKEHNAEPINIVNALNANYL 298

Query: 282 LNEPYLDATDNPQFSDGLYLEANDLSSTVE----ADSQGFDMVEEYLNFFDANDDNSEYL 337
            +E YLDA  +   S+G +LEANDLS  VE     DS GFDMV+EYLNFFDA D+N   +
Sbjct: 299 FDESYLDALGDLPPSEGFFLEANDLSKPVEPETGGDSSGFDMVDEYLNFFDAVDEN---M 355

Query: 338 TFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVK-- 395
           +FD S+I GS    SDQ+P   +V   T+++S A  + +E HG    S+S+QKP+ +K  
Sbjct: 356 SFDPSDIFGSETAVSDQLPPQEDVKGQTEELSTASLNLLETHGTIDPSSSKQKPEAMKFD 415

Query: 396 SESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHP--SSSVHVTAGMIRI 453
           S +D KYPF+KQAS  LGN+ A PA ASEFP+KDAAL L    HP  SSS++VTAGMIRI
Sbjct: 416 SGADFKYPFIKQASHRLGNIPAPPALASEFPSKDAALHL----HPASSSSINVTAGMIRI 471

Query: 454 RNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLW 513
            N++L G+ ++WS GKNG++NI+ SF L Q      P S  P  ++F GKT SVV R   
Sbjct: 472 ENMSLGGNEMEWSFGKNGNVNIILSFGLPQQG---GPASLVPMNSLFPGKTESVVSRGWL 528

Query: 514 LLLFLWIIILSVGFKIGACVSAK 536
            L+F W++ILSV +KIG C+ AK
Sbjct: 529 YLMFFWVLILSVSYKIGTCICAK 551

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486687|ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera] gi|296085948|emb|CBI31389.3| unnamed protein product [Vitis vinifera]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 305/564 (54%), Positives = 392/564 (69%), Gaps = 33/564 (5%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGRE A+ SLAPGFRFHPTDEELV YYLKRKVC +  RF+ I   DIYKSEPWDLP +S 
Sbjct: 1   MGRESAA-SLAPGFRFHPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS+LDKKYGNGSRTNRAT++GYWKTTGKDR V H  RTVGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA------- 173
           RAP GERTNWVMHEYRL D++L+K GVAQD FVLCRIFQKSGSGPKNGEQYGA       
Sbjct: 120 RAPRGERTNWVMHEYRLMDEELKKTGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEW 179

Query: 174 ----VDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNH 229
                    VPG ++ A+E+V   +   E  DL++ +D+    EN P  LNFY+G+ S +
Sbjct: 180 DEDEDVVVFVPG-ELAAEEVVAGHEPSDEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKY 238

Query: 230 VEHSRDLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDE-YIDSSNGVN 274
            E SR  + + QKP IG+      SEL              +DA+ VKDE Y++ SN VN
Sbjct: 239 AEDSRVFNENEQKPFIGMEENHCGSELPNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVN 298

Query: 275 AGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNS 334
           +  V+Y L+EPYLDA++N  F DG +LE +DLS+ VE D  GFD ++EYL F DA+ DN 
Sbjct: 299 SVEVDYLLDEPYLDASENLAFEDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDADGDNL 357

Query: 335 EYLTFDASEILGSGDNNSDQVPLTTE-VTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDI 393
           + + F + E++GS +  SD  PL  E V    +++ +  Q   E +G+  AS+S++ P+ 
Sbjct: 358 QQMAFGSFEMMGSENPLSDLAPLDQEPVNGGAEKLPIGSQQLSEAYGDSGASSSKKNPEA 417

Query: 394 VKSESDVKYPFLKQAS-QMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIR 452
            + ESD+ YPF+KQAS Q+LG + A  A AS+ PTKD ALRLNS    SSSVH+TAGMI+
Sbjct: 418 TEFESDIPYPFIKQASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQ 477

Query: 453 IRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSL 512
           IR+ TLSG+G+DWS GK+G++N + SF L Q   + +  S EP  ++ SGK G V+ R+ 
Sbjct: 478 IRDTTLSGNGVDWSYGKSGNINFMLSFGLPQGETNSA--SLEPIASLMSGKAGPVISRAG 535

Query: 513 WLLLFLWIIILSVGFKIGACVSAK 536
           + L+F+W++ILSV +KIG C+ ++
Sbjct: 536 FYLIFIWVLILSVSYKIGTCICSR 559

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100709|ref|XP_002311983.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222851803|gb|EEE89350.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 317/587 (54%), Positives = 390/587 (66%), Gaps = 73/587 (12%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  ++TSLAPGFRFHPTDEELVRYYLKRKV ++  RF+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRSDSATSLAPGFRFHPTDEELVRYYLKRKVTNKPFRFDAISVTDIYKSEPWDLPDKSK 60

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKYGNGS+TNRATEKGYWKTTGKDRP+  N++ VGMKKTLVYH G
Sbjct: 61  LKSRDLEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPIRQNSQVVGMKKTLVYHQG 120

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV------ 174
           RAP G+R+NWVMHEYRL D++LEKAG+AQD FVLCRIFQKSG+GPKNGEQYGA       
Sbjct: 121 RAPRGQRSNWVMHEYRLVDEELEKAGIAQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEW 180

Query: 175 ---DAALVPGHD-VVADELVVSDDAYFETNDLDQ------------------------NI 206
              +  L+P  + V+ +E  V DDAY E N+L Q                        N 
Sbjct: 181 DDDEVPLLPSEEMVLTEEAPVGDDAYLEMNELGQVCTCIVTCVSVTCSLGSICHQTSHNF 240

Query: 207 DVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSEL---------- 256
           D    SEN     NFY+GE+SN+VE  RD S D+ KPM+     +H   L          
Sbjct: 241 DTGITSENTALPQNFYYGEASNYVEQPRDFSEDDLKPMLRGAENRHGPSLPAEENLDLPG 300

Query: 257 -MDARPVKDEYIDSS--NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVE-- 311
             +   VK+EY ++   N VNA  VNY  +E YLDA +N   S+GL+LEANDLS+ VE  
Sbjct: 301 QYETDAVKNEYNNAEPMNNVNAVDVNYLFDESYLDALNNLPQSEGLFLEANDLSNPVEPE 360

Query: 312 --ADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMS 369
              DS GFDM+EEYLNFFDA+D+N   ++FD S+I  S    S+Q P   E    TD++ 
Sbjct: 361 TGGDSSGFDMLEEYLNFFDADDEN---MSFDPSDIFASDTAVSNQQPPPQEGG--TDEVL 415

Query: 370 MAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKD 429
            A Q  +E HGN   S+S+QKP+ ++ +SD KYPF+KQAS MLG + A PA ASEFP+KD
Sbjct: 416 KAIQKPLETHGNVGPSSSKQKPEAMEFDSDFKYPFIKQASHMLGKIPAPPALASEFPSKD 475

Query: 430 AALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPS 489
           AALRL S +  SSS+HVTAG+IRI N++L G+G +WS GKNG+++++ SF L Q      
Sbjct: 476 AALRLRSAS--SSSIHVTAGVIRIENMSLGGNGTEWSFGKNGNVDVILSFGLPQQE---- 529

Query: 490 PTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 536
                       G   SVV R    L+F W++ILSV +KIG C+ AK
Sbjct: 530 -----------GGPAKSVVSRGWLFLMFFWVLILSVSYKIGTCICAK 565

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147802301|emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/552 (54%), Positives = 381/552 (69%), Gaps = 33/552 (5%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGRE A+ SLAPGFRFHPTDEELV YYLKRKVC +  RF+ I   DIYKSEPWDLP +S 
Sbjct: 1   MGRESAA-SLAPGFRFHPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS+LDKKYGNGSRTNRAT++GYWKTTGKDR V H  RTVGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA------- 173
           RAP GERTNWVMHEYRL D++L+K GVAQD FVLCRIFQKSGSGPKNGEQYGA       
Sbjct: 120 RAPRGERTNWVMHEYRLMDEELKKTGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEW 179

Query: 174 ----VDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNH 229
                    VPG ++ A+E+V   +   E  DL++ +D+    EN P  LNFY+G+ S +
Sbjct: 180 DEDEDVVVFVPG-ELAAEEVVAGHEPSDEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKY 238

Query: 230 VEHSRDLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDE-YIDSSNGVN 274
            E SR  + + QKP IG+      SEL              +DA+ VKDE Y++ SN VN
Sbjct: 239 AEDSRVFNENEQKPFIGMEENHCGSELPNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVN 298

Query: 275 AGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNS 334
           +  V+Y L+EPYLDA++N  F DG +LE +DLS+ VE D  GFD ++EYL F DA+ DN 
Sbjct: 299 SVEVDYLLDEPYLDASENLAFEDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDADGDNL 357

Query: 335 EYLTFDASEILGSGDNNSDQVPLTTE-VTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDI 393
           + + F + E++GS +  SD  PL  E V    ++  +  Q   E +G+  AS+S++ P  
Sbjct: 358 QQMAFGSFEMMGSENPLSDLAPLDQEPVNGGAEKXPIGSQQLSEAYGDSGASSSKKNPXA 417

Query: 394 VKSESDVKYPFLKQAS-QMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIR 452
            + ESD+ YPF+KQAS Q+LG + A  A AS+ PTKD ALRLNS    SSSVH+TAGMI+
Sbjct: 418 TEFESDIPYPFIKQASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQ 477

Query: 453 IRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSL 512
           IR+ TLSG+G+DWS GK+G++N + SF L Q   + +  S EP  ++ SGK G V+ R+ 
Sbjct: 478 IRDTTLSGNGVDWSYGKSGNINFMLSFGLPQGETNSA--SLEPIASLMSGKAGPVISRAG 535

Query: 513 WLLLFLWIIILS 524
           + L+F+W++ILS
Sbjct: 536 FYLIFIWVLILS 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399033|gb|ADL36811.1| NAC domain class transcription factor [Malus x domestica]

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 311/604 (51%), Positives = 391/604 (64%), Gaps = 80/604 (13%)

Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SLAPGFRFHPTDEELV YYLKRKV  ++ RF+PI V DIYK+EPWDLP KS LKTRD EW
Sbjct: 8   SLAPGFRFHPTDEELVWYYLKRKVSGKNFRFDPISVIDIYKTEPWDLPGKSKLKTRDLEW 67

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV HN+R VGMKKTLV+H GRAP G RT
Sbjct: 68  YFFSFLDKKYGNSSRTNRATEKGYWKTTGKDRPVKHNSRDVGMKKTLVFHSGRAPTGART 127

Query: 129 NWVMHEYRLTDDDLEKAGVAQ-DTFVLCRIFQKSGSGPKNGEQYGAV---------DAAL 178
           NWVMHEYRL++++LEKAG+ Q D +VLCRIFQKSG+GPKNGE+YGA          D   
Sbjct: 128 NWVMHEYRLSNEELEKAGIQQKDPYVLCRIFQKSGTGPKNGEKYGAPVMEEEWDDDDVTC 187

Query: 179 VPGHDVVAD-----------ELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESS 227
           VPG +  AD            + V+D AY E  DLDQN+D    SE+AP   NFY+GE+S
Sbjct: 188 VPGEEAAADVVALSEEPHVEAICVNDGAYVEAFDLDQNLDTGIPSESAPPPSNFYYGETS 247

Query: 228 NHVEHSRDLSPDNQKPMIGVGAT-------------QHN--------SELM--------- 257
           +++EHS D   D+ K +IG G T             +HN        +E M         
Sbjct: 248 HYIEHSGDFVEDDTKAVIGTGETLEYHGDQMFFNYPEHNETVGNPVKNEYMTSQSPEDLK 307

Query: 258 ----------DARPVKDE-YIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDL 306
                     DA+ VKDE +++ S+  N   VNY LNEPYL+AT+N    DGL+LEANDL
Sbjct: 308 FVDLPEHNEADAKSVKDECFLEPSDDANPAVVNYSLNEPYLNATENTPIGDGLFLEANDL 367

Query: 307 SSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVT--EV 364
           S+ VE+ + GFDM++EYL +FDANDD S+Y+ FD+  ++G  +   D+ P   ++   E 
Sbjct: 368 SNPVES-TAGFDMLDEYLTYFDANDDISQYIDFDSYGMMGVENYVPDEAPADQKLVNGET 426

Query: 365 TDQ-----------MSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQ-ML 412
             Q             + G+H V+    D AS+S++  +  K ESD  YPF+K+AS  ML
Sbjct: 427 EPQPMGGEHVQPEPQPLGGEHLVQPVDTDDASSSKKTAEF-KFESDGNYPFIKKASHMML 485

Query: 413 GNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGD 472
           G++ A PAFASEFP K+A  RLNS A  SSSVHVTA MIRIR+IT S + +DWS GK+G 
Sbjct: 486 GSIPAPPAFASEFPGKEAMRRLNSGAASSSSVHVTAAMIRIRDITSSDNRMDWSFGKDGV 545

Query: 473 MNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGAC 532
           +N+VFS  LSQ+    +  +  P G   SGKTG VV R  +L +F W++ LS+  KIG+ 
Sbjct: 546 VNLVFSVQLSQD--DGNSGNLVPVGGSLSGKTGCVVMRGWFLFMFFWVLFLSMSLKIGSY 603

Query: 533 VSAK 536
           +  +
Sbjct: 604 IYTR 607

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532398|ref|XP_004173168.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 295/577 (51%), Positives = 378/577 (65%), Gaps = 52/577 (9%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR+ ++TSLAPGFRFHPTDEELV YYLKRKV  +  RF+PI V DIYKSEPWDLP KS 
Sbjct: 1   MGRD-SATSLAPGFRFHPTDEELVSYYLKRKVSGKPFRFDPISVIDIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV H+ RTVGMKKTLVYH+G
Sbjct: 60  LKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSARTVGMKKTLVYHIG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLE----KAGVAQDTFVLCRIFQKSGSGPKNGEQYGA--- 173
           RAP G RTNWVMHEY+LTD++++    K G+ QD FVLCRIFQKSG+GPKNGEQYGA   
Sbjct: 120 RAPRGARTNWVMHEYKLTDEEMDEEMGKIGIVQDAFVLCRIFQKSGTGPKNGEQYGAPFI 179

Query: 174 -------VDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENA-PRHLNFYHGE 225
                   + A+VPG D  ADEL+       E +D  +N++    SE+A P   N+Y+GE
Sbjct: 180 EEEWEENEELAVVPGDDQAADELLGVGGVCIEGDDFSENVEEGILSESAPPPPFNYYYGE 239

Query: 226 SSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDA--------------RPVKDEYI---- 267
           +SN +E S +   D+QKP +G+  T   SEL D               R VK EY+    
Sbjct: 240 TSNSIEQSDNYIEDDQKPAVGICET---SELPDGQKFFVLPDECGLHDRLVKHEYLAESS 296

Query: 268 -----DSSNGVNAGGVN--YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMV 320
                ++++ VNAG ++  Y LNE +   +DN  FSD L LE N+LS+  E+D   FD++
Sbjct: 297 NDAGANAADEVNAGDMDGRYVLNEAFYSTSDNLSFSDELLLEPNELSNPTESDPADFDVL 356

Query: 321 EEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHG 380
           EEYL FFDA+ DN + ++FD SEILGSG    DQ   T  V   T+  S + Q     H 
Sbjct: 357 EEYLTFFDADGDNVD-MSFDPSEILGSGSPIPDQ---TEAVGGATEHASASKQTADLRHD 412

Query: 381 NDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHP 440
           N  +S+S Q+P+  KSESD+KYPFLK  S MLG++ A   FAS+F +KDAA+ LNS    
Sbjct: 413 NGASSSSMQRPEDPKSESDIKYPFLKHTSHMLGSIPA--PFASQFTSKDAAIHLNSAPQA 470

Query: 441 SSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIF 500
           SSSV VTAGM+ IRNI L+G  ++   GKN D+NI++ + + +  I  S      AG + 
Sbjct: 471 SSSVRVTAGMLVIRNIALNGYEVNNMYGKNSDLNIIYLYGIVEGNIDSSQLLPNAAG-VN 529

Query: 501 SGKTGSVVFRS-LWLLLFLWIIILSVGFKIGACVSAK 536
           S K+  ++ R  L+  +  W++ILS  FK+  C+ ++
Sbjct: 530 SSKSEPLISRYFLYFFILFWVLILSASFKVARCIHSR 566

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449383|ref|XP_004142444.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/525 (54%), Positives = 351/525 (66%), Gaps = 46/525 (8%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR+ ++TSLAPGFRFHPTDEELV YYLKRKV  +  RF+PI V DIYKSEPWDLP KS 
Sbjct: 1   MGRD-SATSLAPGFRFHPTDEELVSYYLKRKVSGKPFRFDPISVIDIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV H+ RTVGMKKTLVYH+G
Sbjct: 60  LKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSARTVGMKKTLVYHIG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA------- 173
           RAP G RTNWVMHEY+LTD+++ K  + QD FVLCRIFQKSG+GPKNGEQYGA       
Sbjct: 120 RAPRGARTNWVMHEYKLTDEEMGKIAIVQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEW 179

Query: 174 ---VDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENA-PRHLNFYHGESSNH 229
               + A+VPG D  ADEL+       E +D  +N++    SE+A P   N+Y+GE+SN 
Sbjct: 180 EENEELAVVPGDDQAADELLGVGGVCIEGDDFSENVEEGILSESAPPPPFNYYYGETSNS 239

Query: 230 VEHSRDLSPDNQKPMIGVGATQHNSELMDA--------------RPVKDEYI-DSSNG-- 272
           +E S +   D+QKP +G+  T   SEL D               R VK EY+ +SSN   
Sbjct: 240 IEQSDNYIEDDQKPAVGICET---SELPDGQKFFVLPDECGLHDRLVKHEYLAESSNDAG 296

Query: 273 ------VNAGGVN--YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYL 324
                 VNAG ++  Y LNE +   +DN  FSD L LE N+LS+  E+D   FD++EEYL
Sbjct: 297 ANAADEVNAGDMDGRYVLNEAFYSTSDNLSFSDELLLEPNELSNPTESDPADFDVLEEYL 356

Query: 325 NFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVA 384
            FFDA+ DN + ++FD SEILGSG    DQ   T  V   T+  S + Q     H N  +
Sbjct: 357 TFFDADGDNVD-MSFDPSEILGSGSPIPDQ---TEAVGGATEHASASKQTADLRHDNGAS 412

Query: 385 STSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSV 444
           S+S Q+P+  KSESD+KYPFLK  S MLG++ A   FAS+F +KDAA+ LNS    SSSV
Sbjct: 413 SSSMQRPEDPKSESDIKYPFLKHTSHMLGSIPA--PFASQFTSKDAAIHLNSAPQASSSV 470

Query: 445 HVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPS 489
            VTAGM+ IRNI L+G  ++   GKN D+NI++ + + +  I  S
Sbjct: 471 RVTAGMLVIRNIALNGYEVNNMYGKNSDLNIIYLYGIVEGNIDSS 515

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465328|ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus] gi|449513036|ref|XP_004164210.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 295/564 (52%), Positives = 365/564 (64%), Gaps = 43/564 (7%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MG + +STSLAPGFRFHPTDEE+VRYYL+RKV  +SLRF+PI VT+IYKSEPWDLP KS 
Sbjct: 1   MGSD-SSTSLAPGFRFHPTDEEIVRYYLRRKVSGKSLRFDPISVTEIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LKTRD EWYFFS LDKKYGN SRTNRATE GYWKTTGKDRPV HN+R VGMKKTLVYH G
Sbjct: 60  LKTRDLEWYFFSPLDKKYGNSSRTNRATEHGYWKTTGKDRPVRHNSRVVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA------- 173
           RAP G R+NWVMHEYRLTD+DLEKAGV QD +VLCRIFQKSGSGPKNGEQYGA       
Sbjct: 120 RAPRGARSNWVMHEYRLTDEDLEKAGVVQDAYVLCRIFQKSGSGPKNGEQYGAPFIEEEW 179

Query: 174 --VDAALVPGHDVVADELVVSDDAY--FETNDLDQNIDVANQSENAPRHLNFYHGESSNH 229
              +   +PG +VVA+E +V  D Y  FE +D+ Q  D     E     L  Y  E+SNH
Sbjct: 180 EDDEELTLPGEEVVANEGLVDVDDYMHFEVDDIAQYFDGELPGEYGQPPL-IYPQETSNH 238

Query: 230 VEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEY-------------------IDSS 270
           VE    L  ++ KP +  G T      ++   + ++Y                    +SS
Sbjct: 239 VELPNGLVENDNKPEVCAGDTFELQPSLNFFQLPEQYGTGESSERDDRFAESSGNLAESS 298

Query: 271 NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDAN 330
           +  N   +NY L+EPY    D+   ++ L+LEANDLS+ VE+D    D++EEY  FFDA 
Sbjct: 299 DNFNQEDINYLLDEPYPSVPDDLALNEELFLEANDLSNPVESDPSALDVLEEYFTFFDA- 357

Query: 331 DDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQK 390
           DDN + L FD S++  S +  S Q     +V+EV ++  MA +       ND ASTS+Q 
Sbjct: 358 DDNLQ-LAFDPSDLFDSEEPISSQTTSEEKVSEVAEKEFMAAKQSSVTFVND-ASTSKQD 415

Query: 391 PDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGM 450
           P  +++ SD K PF K AS MLGN+ A PAFASE+P+KD A+RLNS A  SSSVHVTAGM
Sbjct: 416 PKAIETSSDSKSPFFKGASYMLGNIPAPPAFASEYPSKDMAIRLNSAAQTSSSVHVTAGM 475

Query: 451 IRIRNITLSGSGL-DWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVF 509
           I IRN+T +G  + D   GKN D+N++ SF   Q+ +     S E  G I  G  G + F
Sbjct: 476 IHIRNLTSNGDLVNDPLYGKNADVNLILSFAQHQHQVESDHQS-EKNGTIV-GSRGFLFF 533

Query: 510 RSLWLLLFLWIIILSVGFKIGACV 533
             L      W++ILSV FK+G+C+
Sbjct: 534 FLL-----FWVLILSVSFKVGSCI 552

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829590|ref|XP_002882677.1| ANAC053 [Arabidopsis lyrata subsp. lyrata] gi|297328517|gb|EFH58936.1| ANAC053 [Arabidopsis lyrata subsp. lyrata]

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 284/589 (48%), Positives = 362/589 (61%), Gaps = 84/589 (14%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  + TSLAPGFRFHPTDEELVRYYLKRK+C++  +F+ I VTD+YKSEPWDLPDKS 
Sbjct: 1   MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKICNKPFKFDAISVTDVYKSEPWDLPDKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKY NGS+TNRATE GYWKTTGKDR + + ++ VGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV------ 174
           RAP GERTNWVMHEYRL D+DL+K GV QD FVLCRIFQKSGSGPKNGEQYGA       
Sbjct: 120 RAPRGERTNWVMHEYRLVDEDLDKTGVHQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEW 179

Query: 175 ----DAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHV 230
               D   VP      ++L   D  Y + +D+DQ  +     +  P  LNF HGESSN+V
Sbjct: 180 EEEDDMTFVPNQ----EDLGSQDHVYVDMDDIDQKSENFVVYDAIPIPLNFIHGESSNNV 235

Query: 231 EHSRD-----LSPDN------------------QKPMIGVGATQHNSELMDAR---PVKD 264
           E +       + P N                  QKP+I  G  Q+++   +      V+D
Sbjct: 236 ETNYSDSVNYIQPGNYVDSGGYFEQPEESYEKDQKPIIRDGNLQNDALFQEEEIGCGVQD 295

Query: 265 EYIDSSNGVNAGGV---------------NYFLNEPYLDATDNPQFSDGLYLEANDLSST 309
           E+  +SN +++  +               NY   E +LD   N   +DGLYLE NDLSST
Sbjct: 296 EH--TSNLLSSENIFGTDTSCYNDFPVESNYLTGEAFLDPNSNLLQNDGLYLETNDLSST 353

Query: 310 VEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEV--TEVTDQ 367
            +    GFD  E+YL FFD +D++++ LTFD S+++G+ D   DQ  L  EV   E+  +
Sbjct: 354 QQ---DGFDF-EDYLTFFDEDDESAQNLTFDPSQLMGNEDIFVDQEELFQEVETKELKKE 409

Query: 368 MSMAGQHQVEVHGNDVASTSEQ-KPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFP 426
            +   +H VE    D AS S+Q   D  + E D KYPFLK+AS ML  + A PAFASE P
Sbjct: 410 ETSGSKHVVEEKEKDEASCSKQVDADATEFEPDYKYPFLKKASHMLAAIPAPPAFASELP 469

Query: 427 TKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVI 486
           TKDAA+RL++ A  S SVHVTAGM     IT+S   + WS GKNG+ +++ S  L Q   
Sbjct: 470 TKDAAIRLHA-AQSSGSVHVTAGM-----ITISDGNMGWSYGKNGNFDLILSLGLVQ--- 520

Query: 487 SPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSA 535
                     GN  S K+G+    ++ + + LW+++LSV FK+   VS+
Sbjct: 521 ----------GNTASEKSGNSSAWAMLIFMCLWVLVLSVSFKVSILVSS 559

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.429	0.405	0.662	2.8e-120
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.886	0.865	0.410	2e-81
TAIR|locus:2037925	528	NAC13 "NAC domain protein 13"	0.302	0.306	0.626	4.3e-63
TAIR|locus:2075835	451	NAC052 "NAC domain containing	0.438	0.521	0.519	3.4e-61
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.307	0.261	0.604	1.7e-58
TAIR|locus:2009096	557	NAC017 "NAC domain containing	0.304	0.292	0.595	2.6e-57
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.481	0.538	0.430	2.6e-57
TAIR|locus:2184742	489	NAC082 "NAC domain containing	0.309	0.339	0.614	1.8e-56
TAIR|locus:2026114	576	NAC016 "NAC domain containing	0.679	0.631	0.351	2e-53
TAIR|locus:2164391	356	NAC103 "NAC domain containing	0.309	0.466	0.590	4.4e-52

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 836 (299.3 bits), Expect = 2.8e-120, Sum P(2) = 2.8e-120
 Identities = 159/240 (66%), Positives = 187/240 (77%)

Query:     1 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
             MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct:     1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query:    61 LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
             LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct:    60 LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query:   121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV------ 174
             RAP GERTNWVMHEYRL+D+DL+KAGV Q+ +VLCRIFQKSG+GPKNGEQYGA       
Sbjct:   120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEW 179

Query:   175 --DA-ALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVE 231
               D    VP  D  ++ L ++DD Y + +D+D+  +     +  P   N+ HGESSN+VE
Sbjct:   180 EEDGMTYVPAQDAFSEGLALNDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSNNVE 239

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 209/509 (41%), Positives = 284/509 (55%)

Query:     1 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
             MGR  + TSLAPGFRFHPTDEELVRYYLKRK+C++  +F+ I VTD+YKSEPWDLPDKS 
Sbjct:     1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKICNKPFKFDAISVTDVYKSEPWDLPDKSR 59

Query:    61 LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
             LK+RD EWYFFSMLDKKY NGS+TNRATE GYWKTTGKDR + + ++ VGMKKTLVYH G
Sbjct:    60 LKSRDLEWYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKG 119

Query:   121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA--VDAAL 178
             RAP GERTNWVMHEYRL D DL+K GV QD FVLCRIFQKSGSGPKNGEQYGA  V+   
Sbjct:   120 RAPRGERTNWVMHEYRLVDQDLDKTGVHQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEW 179

Query:   179 VPGHDV--VADE--LVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVE--H 232
                 D+  V D+  L   D  Y   +D+DQ  +     +  P  LNF HGESSN+VE  +
Sbjct:   180 EEEDDMTFVPDQEDLGSEDHVYVHMDDIDQKSENFVVYDAIPIPLNFIHGESSNNVETNY 239

Query:   233 SRDLSPDNQKP--MIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDAT 290
             S  ++   Q    M   G  +  +E  + +  K    D    +   G+   + + +   +
Sbjct:   240 SDSINYIQQTGNYMDSGGYFEQPAESYE-KDQKPIIRDRDGSLQNEGIGCGVQDKH---S 295

Query:   291 DNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDD--NSEYLTFDASEILGSG 348
             +  Q SD ++    D S   +   +   ++ E   F D N +   ++ L  + +++  + 
Sbjct:   296 ETLQSSDNIF--GTDTSCYNDFPVESNYLIGEA--FLDPNSNLLENDGLYLETNDLSSTQ 351

Query:   349 DNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDV---ASTSE-QKPDIVKSESDVKYPF 404
              +  D     T   E  D   + G   V     ++     T E +K +  +S+  V+   
Sbjct:   352 QDGFDFEDYLTFFDETFDPSQLMGNEDVFFDQEELFQEVETKELEKEETSRSKHVVEEKE 411

Query:   405 LKQASQMLGNVAAAPAFASEF--PT-KDAALRLNSLAHP---SSSVHVTAGMIRIRNITL 458
               +AS      A A  F  ++  P  K A+  L ++  P   +S        IR+     
Sbjct:   412 KDEASCSKQVDADATEFEPDYKYPLLKKASHMLGAIPAPLANASEFPTKDAAIRLHAAQS 471

Query:   459 SGSGLDWSVGKN--GDMNIVFSFDLSQNV 485
             SGS +  + G     D N+ +S+  ++N+
Sbjct:   472 SGS-VHVTAGMITISDSNMGWSYGKNENL 499

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2037925 NAC13 "NAC domain protein 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 4.3e-63, Sum P(3) = 4.3e-63
 Identities = 104/166 (62%), Positives = 134/166 (80%)

Query:    10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
             LAPGFRFHPTDEELV YYLKRK+  + LR   I  TD+YK +P +LP+K+  KTRD++W+
Sbjct:    10 LAPGFRFHPTDEELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALYKTRDRQWF 69

Query:    70 FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
             FFS+ D+K+G  SR++RATE+GYWK TGKDR +H ++R VG KKTLV+H GRAP+GERTN
Sbjct:    70 FFSLRDRKHG--SRSSRATERGYWKATGKDRVIHCDSRPVGEKKTLVFHRGRAPNGERTN 127

Query:   130 WVMHEYRLTDDDLEKAGV--AQDTFVLCRIFQKSGSGPKNGEQYGA 173
             WVMHEY L  ++L++ G    +D +VL +I++KSGSGPKNGEQYGA
Sbjct:   128 WVMHEYTLHKEELKRCGGEDVKDAYVLYKIYKKSGSGPKNGEQYGA 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010114 "response to red light" evidence=IEP

GO:0010224 "response to UV-B" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2075835 NAC052 "NAC domain containing protein 52" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 131/252 (51%), Positives = 159/252 (63%)

Query:     2 GREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL 61
             G    +TSLAPGFRFHPTDEELV YYLKRKV  + +RF+ I   DIYK EPWDL   S L
Sbjct:    19 GTASVATSLAPGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRL 78

Query:    62 KTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGR 121
             KTRD+EWYF+S LDKKYGNG+R NRAT +GYWK TGKDR +  +   +GMKKTLV+H GR
Sbjct:    79 KTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGR 138

Query:   122 APHGERTNWVMHEYRLTDDDLEKAG-VAQDTFVLCRIFQKSGSGPKNGEQYGAV------ 174
             AP G RTNWVMHEYRL + + EK G + QD +VLCR+F K+  GP +G +Y         
Sbjct:   139 APDGLRTNWVMHEYRLVEYETEKNGNLVQDAYVLCRVFHKNNIGPPSGNRYAPFMEEEWA 198

Query:   175 --DAALVPGHDVVADELVVSDDAYFETND-LDQNIDVANQS----ENAPRHLNFYHGESS 227
               + AL+PG DV   +L +        ND +DQ I  A++S       PR       ES 
Sbjct:   199 DDEGALIPGIDV---KLRLEPPPVANGNDQMDQEIQSASKSLININEPPRETAPLDIESD 255

Query:   228 NHVEHSRDLSPD 239
                 H  DL P+
Sbjct:   256 QQNHHENDLKPE 267

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
 Identities = 101/167 (60%), Positives = 124/167 (74%)

Query:     6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
             A  S+ PGFRFHPTDEELV YYLKRK+  R++    I   D+YK EPWDLP KS L ++D
Sbjct:     2 APVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKD 61

Query:    66 KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
              EW+FFS  D+KY NGSRTNRAT+ GYWK TGKDR V  ++R VG KKTLVY+ GRAPHG
Sbjct:    62 LEWFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHG 121

Query:   126 ERTNWVMHEYRLTDDDLE-KAGVAQDTFVLCRIFQKSGSGPKNGEQY 171
              RT+WVMHEYRL + + + K+G+ QD + LCR+F+KS    K  EQ+
Sbjct:   122 SRTDWVMHEYRLEEQECDSKSGI-QDAYALCRVFKKSALANKIEEQH 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2009096 NAC017 "NAC domain containing protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 97/163 (59%), Positives = 129/163 (79%)

Query:    11 APGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYF 70
             APGFRFHPTDEELV YYLKRK+C + LR N I V D+YK +P +LP +S LKT D++W++
Sbjct:    17 APGFRFHPTDEELVMYYLKRKICRKRLRVNVIGVVDVYKMDPEELPGQSMLKTGDRQWFY 76

Query:    71 FSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNW 130
             F+   +KY N +R+NR TE GYWK TGKDR + +N+R+VG+KKTLV++ GRAP GERT+W
Sbjct:    77 FTPRSRKYPNAARSNRGTENGYWKATGKDRVIEYNSRSVGLKKTLVFYRGRAPSGERTDW 136

Query:   131 VMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA 173
             VMHEY + +D+L +    Q+ + L ++F+KSG+GPKNGEQYGA
Sbjct:   137 VMHEYTMDEDELGRCKNPQEYYALYKLFKKSGAGPKNGEQYGA 179

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0016197 "endosomal transport" evidence=RCA

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 118/274 (43%), Positives = 154/274 (56%)

Query:     6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
             A  SL PGFRFHPTDEEL+ YYLKRK+    +    I   D+YK EPWDLP KS L ++D
Sbjct:     2 APVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKD 61

Query:    66 KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
             +EWYFFS  D+KY NGSRTNRAT+ GYWK TGKDR V    R +G KKTLVY+ GRAPHG
Sbjct:    62 QEWYFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPHG 121

Query:   126 ERTNWVMHEYRLTDDDLEKAGVA-QDTFVLCRIFQKSGSGPKNGEQYGAVDAAL--VPGH 182
              RT WVMHEYRL + + E +    QD + LCR+F+K     K  +Q+ +   A+  V G+
Sbjct:   122 IRTGWVMHEYRLDETECEPSAYGMQDAYALCRVFKKIVIEAKPRDQHRSYVHAMSNVSGN 181

Query:   183 -----DVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNF--YHGESSNHVEHSRD 235
                  D  +D L +S   +   N           + NA  + ++  Y+G S         
Sbjct:   182 CSSSFDTCSD-LEISSTTHQVQNTFQPRFGNERFNSNAISNEDWSQYYGSSYRPFPTPYK 240

Query:   236 LSPDNQKPMIGVGATQHNSELMDARPVKDEYIDS 269
             ++ + +  M+     QHN  L   R     + DS
Sbjct:   241 VNTEIECSML-----QHNIYLPPLRVENSAFSDS 269

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2184742 NAC082 "NAC domain containing protein 82" [Arabidopsis thaliana (taxid:3702)]

 Score = 553 (199.7 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
 Identities = 102/166 (61%), Positives = 123/166 (74%)

Query:     8 TSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKE 67
             T LAPGFRFHPTD ELVRYYLKRK+  + L  + I   DIYK EP DLPD S +++ D +
Sbjct:     4 TQLAPGFRFHPTDVELVRYYLKRKILGKKLLVDAIAEVDIYKFEPPDLPDMSFIRSGDLK 63

Query:    68 WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGER 127
             W+FF   +KKY +G R NRATE GYWKTTGK+RPV  N+  VG  KTLVYH G++P GER
Sbjct:    64 WHFFCPREKKYASGVRANRATECGYWKTTGKERPVLCNSEVVGKIKTLVYHFGKSPRGER 123

Query:   128 TNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA 173
             T+WVMHEYRL D  L +  V QDT+V+C +F+K G GP+NG QYGA
Sbjct:   124 TDWVMHEYRLDDKVLTQMNVPQDTYVVCVLFKKDGPGPRNGAQYGA 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2026114 NAC016 "NAC domain containing protein 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
 Identities = 143/407 (35%), Positives = 212/407 (52%)

Query:    11 APGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDK------------ 58
             APGFRFHPTDEELV YYLKRK+C + LR N I V D+YK +P +LP              
Sbjct:    17 APGFRFHPTDEELVVYYLKRKICCKKLRVNAIGVVDVYKVDPSELPGNFQHLLIDFDSCL 76

Query:    59 SSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYH 118
             S LKT D++W+FF+  ++KY N +R++R T  GYWK TGKDR + +N+R+VG+KKTLV++
Sbjct:    77 SMLKTGDRQWFFFTPRNRKYPNAARSSRGTATGYWKATGKDRVIEYNSRSVGLKKTLVFY 136

Query:   119 MGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAV--DA 176
              GRAP+GERT+WVMHEY + +++L +   A++ + L ++++KSG+GPKNGEQYGA   + 
Sbjct:   137 RGRAPNGERTDWVMHEYTMDEEELGRCKNAKEYYALYKLYKKSGAGPKNGEQYGAPFQEE 196

Query:   177 ALVPGHDVVADELVVSDDAY--FETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSR 234
               V      AD + V D     +E      +    N     P  L     E    +    
Sbjct:   197 EWVDSDSEDADSVAVPDYPVVRYENGPCVDDTKFCN-----PVKLQLEDIEKL--LNEIP 249

Query:   235 DLSPDNQKPMIG-VGATQHNS-ELMDARPVKD---EYIDS-SNGVNA-GGVNYFLNEPYL 287
             D    NQ+     VG  Q NS E++ +  + +   EYID  +NG+    G  Y  +  + 
Sbjct:   250 DAPGVNQRQFDEFVGVPQGNSAEVIQSTLLNNSSGEYIDPRTNGMFLPNGQLYNRDSSFQ 309

Query:   288 DATDNPQFSDGL----------YLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNS-EY 336
                ++ + + G+          Y+E NDL    E  +   +   E+LN  +  D N  + 
Sbjct:   310 SHLNSFEATSGMAPLLDNEKEEYIEMNDLLIP-ELGASSTEKSTEFLNHGEFGDVNEYDQ 368

Query:   337 LTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDV 383
             L  D S   G+  + S     T   +    Q+ +  Q Q +   N +
Sbjct:   369 LFNDISVFQGTSTDLSCLSNFTNNTSGQRQQL-LYEQFQYQTPENQL 414

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2164391 NAC103 "NAC domain containing protein 103" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 98/166 (59%), Positives = 121/166 (72%)

Query:     8 TSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKE 67
             T+LAPGFRFHPTD ELVRYYLKRKV  +  + + I   DIYK EP DLPDKS L T D +
Sbjct:     4 TNLAPGFRFHPTDVELVRYYLKRKVMGKKFQVDAIAEVDIYKFEPPDLPDKSCLGTGDLK 63

Query:    68 WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGER 127
             WYFF   +KKY  G + NR+TE GYWKTTG+DR V +N    G  +TL+YH G+ P G+R
Sbjct:    64 WYFFCPREKKYPKGGKANRSTECGYWKTTGRDRDVSYNDEVTGKIRTLIYHYGKIPRGDR 123

Query:   128 TNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGA 173
             T+WV+HEYRL D  L +  V QDT+VLC +F+K+G GP++G QYGA
Sbjct:   124 TDWVIHEYRLEDKVLAQKNVPQDTYVLCVLFKKNGLGPRHGSQYGA 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84K00	NAC78_ARATH	No assigned EC number	0.4695	0.9533	0.9012	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC049 NAC domain protein, IPR003441 (551 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	536
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-77

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  239 bits (613), Expect = 1e-77
 Identities = 87/131 (66%), Positives = 96/131 (73%), Gaps = 3/131 (2%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLR-FNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           L PGFRFHPTDEELV YYLKRKV  + L   + I   DIYK EPWDLPD    K  D+EW
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREW 59

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH-NTRTVGMKKTLVYHMGRAPHGER 127
           YFFS  D+KY NGSRTNRAT  GYWK TGKD+PV       VGMKKTLV++ GRAP GE+
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 128 TNWVMHEYRLT 138
           T+WVMHEYRL 
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	536
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=7e-41  Score=301.46  Aligned_cols=127  Identities=53%  Similarity=1.026  Sum_probs=97.2

Q ss_pred             CCCCceeCCChHHHHHHHHHHHhcCCCCCC-CCeeeccCCCCCCCCCCcccccCCCCcceeeeeccccccCCCCcccccC
Q 009389           10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRF-NPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRAT   88 (536)
Q Consensus        10 LPPGfRF~PTDEELI~~YL~rKi~G~pl~~-~~I~evDVY~~dPWdLp~~~~~~~~d~eWYFFs~r~rK~~nG~R~nR~t   88 (536)
                      |||||||+|||+|||.+||++|+.|.+++. ++|+++|||.+|||+|++..  .+++.+||||+++++++.++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~--~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKF--KGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHS--SS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhc--cCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999887 68999999999999999532  335679999999999999999999999


Q ss_pred             ccceeeecCCCceeec-CCeeEEEEEEEEeecCCCCCCCCcCeEEEEEEeC
Q 009389           89 EKGYWKTTGKDRPVHH-NTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLT  138 (536)
Q Consensus        89 ggGyWK~tG~~k~I~~-~g~vVG~KKtLvFy~Gr~p~G~kT~WvMhEY~L~  138 (536)
                      ++|+||.+|+.++|.. ++.+||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999987 8999999999999998888899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	536
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-41
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		5e-41
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-41

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  166 bits (420), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEW
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEW 76
Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +T
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 136
Query: 129 NWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           NW+MHEYRL +          D +VLCRI++K  S  K
Sbjct: 137 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  165 bits (418), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 80/166 (48%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTD+ELV +YL RK   + L    I   D+YK +PWDLP+++    R 
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR- 69
Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFF+  D+KY NGSR NRA   GYWK TG D+PV    RT+G+KK LV++ G+AP G
Sbjct: 70  -EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128
Query: 126 ERTNWVMHEYRL-----TDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
            +T+W+MHEYRL          +K  +  D +VLCR++ K     K
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  165 bits (418), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEW
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEW 73
Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +T
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133
Query: 129 NWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           NW+MHEYRL +          D +VLCRI++K  S  K
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	536
1ut7_A	171	No apical meristem protein; transcription regulati	5e-99
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-96

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  295 bits (758), Expect = 5e-99
 Identities = 79/170 (46%), Positives = 102/170 (60%), Gaps = 6/170 (3%)

Query: 1   MGRE----FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLP 56
           MG +        SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP
Sbjct: 4   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLV 116
           +K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV
Sbjct: 64  NKALF--GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALV 121

Query: 117 YHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           +++G+AP G +TNW+MHEYRL +          D +VLCRI++K  S  K
Sbjct: 122 FYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  289 bits (741), Expect = 2e-96
 Identities = 80/166 (48%), Positives = 106/166 (63%), Gaps = 7/166 (4%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTD+ELV +YL RK   + L    I   D+YK +PWDLP+++      
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERA--LFGA 68

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
           +EWYFF+  D+KY NGSR NRA   GYWK TG D+PV    RT+G+KK LV++ G+AP G
Sbjct: 69  REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128

Query: 126 ERTNWVMHEYRLTDDDL-----EKAGVAQDTFVLCRIFQKSGSGPK 166
            +T+W+MHEYRL D        +K  +  D +VLCR++ K     K
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	536
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=2.8e-53  Score=401.81  Aligned_cols=156  Identities=50%  Similarity=0.965  Sum_probs=135.9

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHHHhcCCCCCCCCeeeccCCCCCCCCCCcccccCCCCcceeeeeccccccCCCCcc
Q 009389            5 FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRT   84 (536)
Q Consensus         5 ~~~~~LPPGfRF~PTDEELI~~YL~rKi~G~pl~~~~I~evDVY~~dPWdLp~~~~~~~~d~eWYFFs~r~rK~~nG~R~   84 (536)
                      .+++.|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..  ++.+|||||++++||++|.|+
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~--g~~ewYFFs~r~~ky~~g~R~   87 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF--GAREWYFFTPRDRKYPNGSRP   87 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSS--CSSEEEEEEECCC-----CCS
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhcc--CCceEEEEeccccccCCCCCc
Confidence            356899999999999999999999999999999999999999999999999998753  467999999999999999999


Q ss_pred             cccCccceeeecCCCceeecCCeeEEEEEEEEeecCCCCCCCCcCeEEEEEEeCCCchhh----c-CCCCCceEEEEEee
Q 009389           85 NRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEK----A-GVAQDTFVLCRIFQ  159 (536)
Q Consensus        85 nR~tggGyWK~tG~~k~I~~~g~vVG~KKtLvFy~Gr~p~G~kT~WvMhEY~L~~~~~~~----~-~~~~d~~VLCRIy~  159 (536)
                      +|+|++||||++|++++|..+|.+||+||+|+||.|++|++.||+|+||||+|.+.....    . ....++|||||||+
T Consensus        88 nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~  167 (174)
T 3ulx_A           88 NRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYN  167 (174)
T ss_dssp             CEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEE
T ss_pred             eeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEE
Confidence            999999999999999999988999999999999999999999999999999999865321    1 12357999999999


Q ss_pred             cCC
Q 009389          160 KSG  162 (536)
Q Consensus       160 Ks~  162 (536)
                      |++
T Consensus       168 K~~  170 (174)
T 3ulx_A          168 KKN  170 (174)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            865

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.9e-53  Score=400.77  Aligned_cols=156  Identities=49%  Similarity=0.917  Sum_probs=132.0

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHHhcCCCCCCCCeeeccCCCCCCCCCCcccccCCCCcceeeeeccccccCCCCccc
Q 009389            6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTN   85 (536)
Q Consensus         6 ~~~~LPPGfRF~PTDEELI~~YL~rKi~G~pl~~~~I~evDVY~~dPWdLp~~~~~~~~d~eWYFFs~r~rK~~nG~R~n   85 (536)
                      ....|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+.  .++.+|||||++++||++|.|++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~--~g~~ewyFFs~r~~k~~~g~R~~   90 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPN   90 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CC
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhh--cCCccEEEEeccccccCCCCccc
Confidence            4688999999999999999999999999999999999999999999999999874  34689999999999999999999


Q ss_pred             ccCccceeeecCCCceeecCCeeEEEEEEEEeecCCCCCCCCcCeEEEEEEeCCCchhhcCCCCCceEEEEEeecCCC
Q 009389           86 RATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGS  163 (536)
Q Consensus        86 R~tggGyWK~tG~~k~I~~~g~vVG~KKtLvFy~Gr~p~G~kT~WvMhEY~L~~~~~~~~~~~~d~~VLCRIy~Ks~~  163 (536)
                      |+|++||||++|++++|..++.+||+||+|+||.|++|++.||+|+||||+|...........+++|||||||+|+..
T Consensus        91 R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             ccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            999999999999999999889999999999999999999999999999999998752222234589999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	536
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-70

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  220 bits (562), Expect = 2e-70
 Identities = 77/164 (46%), Positives = 100/164 (60%), Gaps = 6/164 (3%)

Query: 1   MGRE----FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLP 56
           MG +        SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP
Sbjct: 4   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLV 116
           +K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV
Sbjct: 64  NKA--LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALV 121

Query: 117 YHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 160
           +++G+AP G +TNW+MHEYRL +          D +VLCRI++K
Sbjct: 122 FYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	536
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-50  Score=377.80  Aligned_cols=153  Identities=49%  Similarity=0.929  Sum_probs=130.9

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHHhcCCCCCCCCeeeccCCCCCCCCCCcccccCCCCcceeeeeccccccCCCCccc
Q 009389            6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTN   85 (536)
Q Consensus         6 ~~~~LPPGfRF~PTDEELI~~YL~rKi~G~pl~~~~I~evDVY~~dPWdLp~~~~~~~~d~eWYFFs~r~rK~~nG~R~n   85 (536)
                      .+++|||||||+|||||||.|||++|+.|.|++.++|+++|||++|||+||+.+.  .++.+||||+++++++++|.|.+
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~--~~~~~wyFft~~~~k~~~g~r~~   90 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPN   90 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CC
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhc--cCcceEEEEeeeccccCCCCccc
Confidence            6789999999999999999999999999999999999999999999999998764  34679999999999999999999


Q ss_pred             ccCccceeeecCCCceeecCCeeEEEEEEEEeecCCCCCCCCcCeEEEEEEeCCCchhhcCCCCCceEEEEEeec
Q 009389           86 RATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK  160 (536)
Q Consensus        86 R~tggGyWK~tG~~k~I~~~g~vVG~KKtLvFy~Gr~p~G~kT~WvMhEY~L~~~~~~~~~~~~d~~VLCRIy~K  160 (536)
                      |++++|+||.+|++++|.++|.+||+||+|+||.++++++.||+|+||||+|.+..........++|||||||+|
T Consensus        91 R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~K  165 (166)
T d1ut7a_          91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK  165 (166)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEEC
T ss_pred             cccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEec
Confidence            999999999999999999999999999999999999999999999999999998754433344579999999987