Citrus Sinensis ID: 009397
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 535 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WSF1 | 596 | Aldehyde dehydrogenase 22 | yes | no | 0.928 | 0.833 | 0.845 | 0.0 | |
| P38694 | 644 | Putative aldehyde dehydro | yes | no | 0.814 | 0.677 | 0.396 | 4e-90 | |
| Q9P7K9 | 522 | Putative aldehyde dehydro | yes | no | 0.813 | 0.833 | 0.350 | 2e-83 | |
| P94428 | 462 | Succinate-semialdehyde de | yes | no | 0.768 | 0.889 | 0.297 | 4e-53 | |
| P17202 | 497 | Betaine aldehyde dehydrog | N/A | no | 0.803 | 0.865 | 0.304 | 8e-53 | |
| Q9S795 | 501 | Betaine aldehyde dehydrog | no | no | 0.8 | 0.854 | 0.318 | 5e-52 | |
| A4XPI6 | 490 | Betaine aldehyde dehydrog | yes | no | 0.760 | 0.830 | 0.319 | 1e-51 | |
| Q0B712 | 489 | Betaine aldehyde dehydrog | no | no | 0.771 | 0.844 | 0.313 | 1e-51 | |
| Q802W2 | 518 | Aldehyde dehydrogenase fa | yes | no | 0.771 | 0.797 | 0.321 | 2e-51 | |
| B1Z033 | 489 | Betaine aldehyde dehydrog | no | no | 0.771 | 0.844 | 0.313 | 2e-51 |
| >sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/497 (84%), Positives = 459/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P38694|MSC7_YEAST Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 332 bits (851), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 267/459 (58%), Gaps = 23/459 (5%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
P+ +QC+ PAT +YLG FP+ + A++DE V++A KAQ W S F +R + L L
Sbjct: 105 NPEEPNFIQCHCPATGQYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLH 164
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
YI+ +Q+LI ++ RD+GKTM+DAS+GEI+ T EKI W + G++ L+P R +
Sbjct: 165 DYILNNQDLIARVACRDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFF 224
Query: 179 ---HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+K A++ + PLGV+ +IVSWNYPFHN+ P++AA+F+GN IV+K SE WS F+
Sbjct: 225 MKWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFV 284
Query: 236 RIIQAALAAVGAPENLVDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288
+I+ L A +LV + T ++ S I F+GS V I++ A
Sbjct: 285 ELIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCA 344
Query: 289 SKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 347
+K+LTPV +ELGGKDAFIV D ++ ++ I +R QSSGQNC G ER V ++ Y
Sbjct: 345 AKSLTPVVVELGGKDAFIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY-- 402
Query: 348 FVSQVAKIVKS-VSAGPPLAG-------KYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
+ KI+ ++A P G DMGA+ ++L+ LV DA+ KGA +L
Sbjct: 403 --DDLVKILNDRMTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQ 460
Query: 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS + YF PT++V+V MK+ Q E FGPI+ +MK + V+LAN + +
Sbjct: 461 GGSRFKHPKYPQGHYFQPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPF 520
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQV 498
GLG +VF +A +Q G AINDFA+ Y+CQ+
Sbjct: 521 GLGGSVFGADIKECNYVANSLQTGNVAINDFATFYVCQL 559
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9P7K9|YOSF_SCHPO Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.15c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 252/437 (57%), Gaps = 2/437 (0%)
Query: 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
+ + CY P LG +++++D+ + A +AQK W +SF +RR FL+ L + II
Sbjct: 3 STLTCYCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIR 62
Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
+Q+ EI+ +DTGKT+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K
Sbjct: 63 NQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGY 122
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
V++ PLGV+ A+VSWNYP HN P+++A+F+GN IV+K SE +WS Y ++++ L
Sbjct: 123 VKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQ 182
Query: 244 AVGAPENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
++G LV IT + + L S + I F+GS + +++ +A+K LTP+ LELGG
Sbjct: 183 SMGHSPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGG 242
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
KD I+ DD + + I +R QS+GQNC G ER +Y ++++ + ++
Sbjct: 243 KDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRL 302
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G DMGA+ + L++L+ DA+ KGA ++ G + YF PT++V
Sbjct: 303 GMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLV 362
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481
+ + MK+ QEE F PI + + + E +++AN + +GLG +VF + + ++
Sbjct: 363 DATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLE 422
Query: 482 CGVAAINDFASNYMCQV 498
G+ A+NDF + Y+ Q+
Sbjct: 423 TGMVAVNDFGAFYLLQM 439
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P94428|GABD_BACSU Succinate-semialdehyde dehydrogenase [NADP(+)] OS=Bacillus subtilis (strain 168) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 229/433 (52%), Gaps = 22/433 (5%)
Query: 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
++ Y PAT + + P S EV+E + ++ +A K W+K+S +R L+ + I+EH
Sbjct: 4 QLTVYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERTSLLKKWYELIVEH 63
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHK 180
+E + ++ +++ GK +A +GE++ I W E + R GR++ K
Sbjct: 64 KEELADLITKENGKPYQEA-VGEVLYGAGYIEWFAEEAK-------RVYGRTVPAPTTGK 115
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+ V P+G V AI WN+P I A+ +G +IK + + S R+
Sbjct: 116 RIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAPDTPLSAYELARLAYE 175
Query: 241 ALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
A G P++++ V+ G E G SS + KI F GS VG+++M+N++ T+ V++
Sbjct: 176 A----GIPKDVLQVVIGDGEEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHVSM 231
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGG IV +D D+ + A+ + +++GQ C A R VH I F +++++ V
Sbjct: 232 ELGGHAPLIVDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVS 291
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 416
+ G L ++G + EK+ + ++DA++KGA+++A G++ + YF
Sbjct: 292 KLKVGNGLEEGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGC--YFVN 349
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV+ +V+ +M +M EE FGP+ PI+ F+ +E ++LAND+ YGL F+ + R I
Sbjct: 350 PTVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFTENYRRGIYI 409
Query: 477 AAQIQCGVAAIND 489
+ ++ G+ ND
Sbjct: 410 SENLEYGIIGWND 422
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Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P17202|BADH_SPIOL Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 222/444 (50%), Gaps = 14/444 (3%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I R P + ++ P+T + +G PA + +V+ V AR+A + W+ +S
Sbjct: 10 LFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGA 69
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
R +LR + I E ++ ++ + D+GK +A L +I + + E
Sbjct: 70 HRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGK 128
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
+ M K+ V PLGVVG I WNYP + A+ +G V+K SE AS
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285
+ C F + VG P +++++TG + G LVS VDKI F GS G +M
Sbjct: 189 VT-CLEFGEV---CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
+A++ + PVTLELGGK +V +DVD+ V + + ++GQ C+ R VH I
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-G 404
A FV ++ K K++ P +G + +K+ ++ A +GA IL GS
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
HL +G Y PT++ +++ +M++ +EE FGP++ + F++++E + LAND+ YGL A
Sbjct: 365 HLKKG---YYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAA 421
Query: 465 VFSGSQHRAREIAAQIQCGVAAIN 488
VFS R I ++ G +N
Sbjct: 422 VFSNDLERCERITKALEVGAVWVN 445
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Spinacia oleracea (taxid: 3562) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9S795|BADH1_ARATH Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 229/449 (51%), Gaps = 21/449 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKS 105
++I R P + ++ PAT + +G PA + +VD V AR+A K WAK+
Sbjct: 10 LFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
R ++LR + + E + + ++ + D GK + +A + + C + L+EG
Sbjct: 70 PGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEG-- 127
Query: 165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
L + ++ M K+ V PLGVVG I WNYP + ++ +G ++K
Sbjct: 128 -LDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGV 280
SE AS + C I VG P +++V+TGF +E G L S VDKI F GS
Sbjct: 187 SELASVT-CLELADI---CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFAT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G +M A++ + PV++ELGGK IV DDVD+ A+ A+ ++GQ C+ R V
Sbjct: 243 GSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I + F+ ++ K K++ P+ +G + EK+ ++ A +GA IL
Sbjct: 303 HESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHG 362
Query: 401 GSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS HL +G + PT+I +V +M++ +EE FGP++ + F +++E ++LANDS Y
Sbjct: 363 GSRPEHLEKGF---FIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHY 419
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
GLG AV S R I+ + G+ IN
Sbjct: 420 GLGAAVISNDTERCDRISEAFEAGIVWIN 448
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|A4XPI6|BETB_PSEMY Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 218/435 (50%), Gaps = 28/435 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + L S+A+VD VA A + QKVWA + QR + LR + + E + + E
Sbjct: 29 PATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILRERNDELAE 88
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVE 185
+ + DTGK + + +I+T + + + EGE+ E S ++ + +
Sbjct: 89 LETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPLRE-----SSFVYTRRE-- 141
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
PLGVV I +WNYP A+ +GN ++ K SE S + I A
Sbjct: 142 --PLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEA---- 195
Query: 246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGG 301
G P + +V+TG E G+ L ++K+ F G G+ +M +AS + L VT+ELGG
Sbjct: 196 GLPAGVFNVLTGSGREVGQWLTEHPGIEKVSFTGGTVTGKKVMASASSSSLKEVTMELGG 255
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
K IV +D D+ A IAV A SSGQ C R +V R + A F ++V + VK +
Sbjct: 256 KSPLIVFEDADLDRAADIAVMANFYSSGQVCTNGTRVFVPRMLQARFEAKVLERVKRIRL 315
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG---SFGHLSEGAVDQYFPPT 418
G PL + G L H E + + +GA +L G S G ++GA Y PT
Sbjct: 316 GDPLDDATNFGPLVSYAHMESVLGYIEKGRSEGARLLIGGTRVSDGDYAKGA---YVAPT 372
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V + M +++EE FGP+M I+ ++++EEV++ AND+ YGL V + +RA +
Sbjct: 373 VFTDCRDDMTIVREEIFGPVMSILIYDSEEEVIRRANDTDYGLAAGVVTRDLNRAHRVIH 432
Query: 479 QIQCGVAAINDFASN 493
+++ G+ IN + +
Sbjct: 433 KLEAGICWINTWGES 447
|
Pseudomonas mendocina (strain ymp) (taxid: 399739) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q0B712|BETB_BURCM Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 213/434 (49%), Gaps = 21/434 (4%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
++PAT + L S A+VD VA AR+ Q+ WA + QR + LR + + E +
Sbjct: 26 TFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDE 85
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVE 185
+ I +RDTGK + + +I+T + I + L+ + L+ R+ S ++ + +
Sbjct: 86 LAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAE--SFVYTRRE-- 141
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
PLGV I +WNYP A+ +GN +V K SE + I A
Sbjct: 142 --PLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEA---- 195
Query: 246 GAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 302
G P + +V+ G G L D K+ F G G+ +M A + +L VT+ELGGK
Sbjct: 196 GVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGK 255
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
IV +D D+ A IAV A SSGQ C R +VHR + F +V + VK + G
Sbjct: 256 SPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF---GHLSEGAVDQYFPPTV 419
P + G L +K+ ++ +GA++LA G+ GH + G QY PTV
Sbjct: 316 KPTDAATNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFASG---QYVAPTV 372
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ MK+++EE FGP+M I+ F +++EV+ AND+ YGL V + + RA +
Sbjct: 373 FGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHR 432
Query: 480 IQCGVAAINDFASN 493
++ G+ IN + +
Sbjct: 433 LEAGICWINTWGES 446
|
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (taxid: 339670) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q802W2|A9A1B_DANRE Aldehyde dehydrogenase family 9 member A1-B OS=Danio rerio GN=aldh9a1b PE=2 SV=2 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 209/426 (49%), Gaps = 13/426 (3%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+EPAT + L AEVD V A A KVW K S +R + + + I + +E I
Sbjct: 56 FEPATGRVLCRLQTCGSAEVDAAVRNASAAFKVWRKLSGMERARVMLEAARLIEKRREEI 115
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
E+ + GK++ +A L ++ + I + + + G S + + + P
Sbjct: 116 AEMEVINNGKSITEARL-DVDSARLSIEYFAGQATTLSGQHVQLPGGSFAYTRRE----P 170
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
GV I +WNYPF A+ GN +V K S + I + A GAP
Sbjct: 171 FGVCVGIGAWNYPFQIAAWKSAPAIACGNSMVFKPSPLTPVTAVLLAEIYRQA----GAP 226
Query: 249 ENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
E L +V+ G ETG L SV+K+ F GS G+ IM AS+ + VTLELGGK I
Sbjct: 227 EGLFNVVQGGQETGSLLCLHPSVEKVSFTGSVPTGKKIMEMASRGVKAVTLELGGKSPLI 286
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
+ +D D+ + + A+ A S GQ C+ R +V I F+ +V + K++S G PL
Sbjct: 287 IFEDTDLENAVRGALMANFLSQGQVCSNGTRVFVQSSIVPQFLKEVVRRTKAISIGDPLL 346
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYF-PPTVIVNVN 424
+ MGAL H +K+ V A ++GA++L G F D Y+ P V+ +
Sbjct: 347 DETRMGALVSKAHLDKVLRYVEQAKNEGAQVLCGGEPFSPADPKLKDGYYMTPCVLDSCT 406
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
M ++EE FGP+M ++ F+T++EV++ ANDS GL VF+ RA + +Q G
Sbjct: 407 DDMTCVKEEIFGPVMSVLTFDTEDEVLRRANDSDLGLAAGVFTKDVKRAHRVIENLQAGS 466
Query: 485 AAINDF 490
IN++
Sbjct: 467 CFINNY 472
|
Danio rerio (taxid: 7955) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|B1Z033|BETB_BURA4 Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 212/434 (48%), Gaps = 21/434 (4%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
++PAT + L S A+VD VA AR+ Q+ WA + QR + LR + + E +
Sbjct: 26 TFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDE 85
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVE 185
+ I +RDTGK + + +I+T + I + L+ + L+ R+ S ++ + +
Sbjct: 86 LAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAE--SFVYTRRE-- 141
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
PLGV I +WNYP A+ +GN +V K SE + I A
Sbjct: 142 --PLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEA---- 195
Query: 246 GAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 302
G P + +V+ G G L D K+ F G G+ +M A + +L VT+ELGGK
Sbjct: 196 GVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGK 255
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
IV +D D+ A IAV A SSGQ C R +VHR + F +V + VK + G
Sbjct: 256 SPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF---GHLSEGAVDQYFPPTV 419
P + G L +K+ ++ +GA++LA G+ GH G QY PTV
Sbjct: 316 KPTDADTNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFGSG---QYVAPTV 372
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ MK+++EE FGP+M I+ F +++EV+ AND+ YGL V + + RA +
Sbjct: 373 FGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHR 432
Query: 480 IQCGVAAINDFASN 493
++ G+ IN + +
Sbjct: 433 LEAGICWINTWGES 446
|
Burkholderia ambifaria (strain MC40-6) (taxid: 398577) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 535 | ||||||
| 255556370 | 593 | aldehyde dehydrogenase, putative [Ricinu | 0.927 | 0.836 | 0.883 | 0.0 | |
| 224101571 | 594 | predicted protein [Populus trichocarpa] | 0.927 | 0.835 | 0.869 | 0.0 | |
| 297833440 | 594 | ALDH22a1 [Arabidopsis lyrata subsp. lyra | 0.928 | 0.836 | 0.845 | 0.0 | |
| 12321913 | 578 | betaine aldehyde dehydrogenase, putative | 0.928 | 0.859 | 0.845 | 0.0 | |
| 42572293 | 596 | aldehyde dehydrogenase 22A1 [Arabidopsis | 0.928 | 0.833 | 0.845 | 0.0 | |
| 42563558 | 554 | aldehyde dehydrogenase 22A1 [Arabidopsis | 0.928 | 0.897 | 0.845 | 0.0 | |
| 110735945 | 596 | betaine aldehyde dehydrogenase like prot | 0.928 | 0.833 | 0.843 | 0.0 | |
| 225431946 | 593 | PREDICTED: aldehyde dehydrogenase 22A1 [ | 0.921 | 0.831 | 0.857 | 0.0 | |
| 356564784 | 596 | PREDICTED: aldehyde dehydrogenase 22A1-l | 0.928 | 0.833 | 0.845 | 0.0 | |
| 356521770 | 597 | PREDICTED: aldehyde dehydrogenase 22A1-l | 0.928 | 0.832 | 0.839 | 0.0 |
| >gi|255556370|ref|XP_002519219.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223541534|gb|EEF43083.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/497 (88%), Positives = 468/497 (94%), Gaps = 1/497 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + +IVLAFAYAICRFLLMLIP NVPSIDVDASDVLD GNQ +NSFIYIPPRGRT
Sbjct: 1 MAFWWPIIVLAFAYAICRFLLMLIPTNVPSIDVDASDVLD-GNQKEENSFIYIPPRGRTQ 59
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
Q E KVQCYEPATMKYLG+FPALS EV ERV QARKAQ++WAKSSFKQRRQFLRILLKY
Sbjct: 60 QQERKVQCYEPATMKYLGFFPALSPTEVKERVTQARKAQRIWAKSSFKQRRQFLRILLKY 119
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTM+DASLGEIMTTCEKITWLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 120 IIEHQELICEVSSRDTGKTMIDASLGEIMTTCEKITWLLSEGEQWLKPEYRSSGRSMLHK 179
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
KAKVEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSGCFYFRIIQA
Sbjct: 180 KAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGCFYFRIIQA 239
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVD+ITGFAETGEALVSS DK+IFVGSPGVG+MIMRNA+ TL PVTLELG
Sbjct: 240 ALAAVGAPENLVDIITGFAETGEALVSSADKVIFVGSPGVGKMIMRNAANTLVPVTLELG 299
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVDVPHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FVS+VAKIVKSVS
Sbjct: 300 GKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHKDIYSSFVSEVAKIVKSVS 359
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHS+KLQNLVNDA+DKGA I ARGSFGHL EGAVDQYFPPT++
Sbjct: 360 AGPPLTGRYDMGAICLQEHSDKLQNLVNDAIDKGAVIEARGSFGHLGEGAVDQYFPPTIL 419
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNHTMKLM+EE FGPIMPIMKF+TDEE VKLAND RYGLGCAVFSGSQ RA+EIA+QI
Sbjct: 420 VNVNHTMKLMREETFGPIMPIMKFSTDEEAVKLANDCRYGLGCAVFSGSQRRAKEIASQI 479
Query: 481 QCGVAAINDFASNYMCQ 497
CGVAAINDFAS YMCQ
Sbjct: 480 HCGVAAINDFASTYMCQ 496
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101571|ref|XP_002312334.1| predicted protein [Populus trichocarpa] gi|222852154|gb|EEE89701.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/497 (86%), Positives = 463/497 (93%), Gaps = 1/497 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + LIV A AYAICRFLLMLIP NVPSIDVDASDV +GNQT +NSFIYIPPRGR
Sbjct: 1 MAFWWPLIVAASAYAICRFLLMLIPFNVPSIDVDASDV-TEGNQTQENSFIYIPPRGRAQ 59
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLG+FPALS AEV +RVAQARKAQK+WA+SSFKQRRQFLRILLKY
Sbjct: 60 QSDKKVQCYEPATMKYLGFFPALSPAEVHDRVAQARKAQKIWAESSFKQRRQFLRILLKY 119
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR SGR+M +K
Sbjct: 120 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRCSGRAMFYK 179
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
K++VEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSG FYFRIIQA
Sbjct: 180 KSRVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGLFYFRIIQA 239
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVG+MIMRNAS TL PVTLELG
Sbjct: 240 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKMIMRNASDTLIPVTLELG 299
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKD FIVC+D DV HVAQIAVRA LQSSGQNCAGAERFYVHRDIY+ FVS+V KIVKSVS
Sbjct: 300 GKDPFIVCEDADVSHVAQIAVRAVLQSSGQNCAGAERFYVHRDIYSSFVSEVTKIVKSVS 359
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
GPPLAG+YDMGA+CL EHS+KLQ LVNDAL+KGAEI+ RGSFGHL EGAVDQ++PPTV+
Sbjct: 360 VGPPLAGRYDMGAICLQEHSDKLQILVNDALEKGAEIVVRGSFGHLGEGAVDQFYPPTVL 419
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNV+HTMKLMQEE FGP+MPIMKF+TDEE VKLANDSRYGLGCAVFSGSQ RAREIA+QI
Sbjct: 420 VNVDHTMKLMQEETFGPVMPIMKFSTDEEAVKLANDSRYGLGCAVFSGSQRRAREIASQI 479
Query: 481 QCGVAAINDFASNYMCQ 497
CGVAA+NDFASNYMCQ
Sbjct: 480 HCGVAAVNDFASNYMCQ 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297833440|ref|XP_002884602.1| ALDH22a1 [Arabidopsis lyrata subsp. lyrata] gi|297330442|gb|EFH60861.1| ALDH22a1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/497 (84%), Positives = 460/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEQWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HV+Q+AVR LQSSGQNCAGAERFYVH+DIY F+SQV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVSQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFISQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|12321913|gb|AAG50992.1|AC036106_5 betaine aldehyde dehydrogenase, putative; 22009-25681 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/497 (84%), Positives = 459/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42572293|ref|NP_974242.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|118595572|sp|Q0WSF1.2|AL221_ARATH RecName: Full=Aldehyde dehydrogenase 22A1; AltName: Full=Novel aldehyde dehydrogenase family 22 member A1; Flags: Precursor gi|42406419|emb|CAE48165.1| putative aldehyde dehydrogenase [Arabidopsis thaliana] gi|332640912|gb|AEE74433.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/497 (84%), Positives = 459/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42563558|ref|NP_187321.2| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|332640913|gb|AEE74434.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/497 (84%), Positives = 459/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110735945|dbj|BAE99947.1| betaine aldehyde dehydrogenase like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/497 (84%), Positives = 458/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSID DASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDADASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431946|ref|XP_002277743.1| PREDICTED: aldehyde dehydrogenase 22A1 [Vitis vinifera] gi|296083253|emb|CBI22889.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/497 (85%), Positives = 465/497 (93%), Gaps = 4/497 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VL FA+A+CRFLLMLIPPNVPSIDVDASDVLDDG +T +NSFIYIP RGRTP
Sbjct: 1 MAFWWPLLVLGFAFALCRFLLMLIPPNVPSIDVDASDVLDDG-KTKENSFIYIPSRGRTP 59
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
+ KVQCYEPATMKYLG+ PAL EV E VAQARKAQK+WA+SSFKQRRQFLRILLKY
Sbjct: 60 E---KVQCYEPATMKYLGFCPALRPDEVREHVAQARKAQKIWARSSFKQRRQFLRILLKY 116
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPEYRS+GRSM+HK
Sbjct: 117 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPEYRSTGRSMLHK 176
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGNG+VIKVSE+ASWSGCFY RIIQA
Sbjct: 177 TAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYLRIIQA 236
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVG+ IMRNAS TL PVTLELG
Sbjct: 237 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKTIMRNASDTLIPVTLELG 296
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVDVPHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FV++V +IVKSV+
Sbjct: 297 GKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHQDIYSKFVAEVVRIVKSVT 356
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL+GKYDMGA+C+ EHSEKLQNLVN+ALDKGAE RGSFG+L E AVDQ+FPPTV+
Sbjct: 357 AGPPLSGKYDMGAICMQEHSEKLQNLVNEALDKGAEFAGRGSFGNLGEDAVDQFFPPTVL 416
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNH+M+LMQEEAFGPI+PIMKF++DEEVVKLANDSRYGLGCAVFSGSQ RA+ IA+QI
Sbjct: 417 VNVNHSMQLMQEEAFGPILPIMKFSSDEEVVKLANDSRYGLGCAVFSGSQRRAKAIASQI 476
Query: 481 QCGVAAINDFASNYMCQ 497
CG+AAINDFAS YMCQ
Sbjct: 477 HCGMAAINDFASTYMCQ 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564784|ref|XP_003550628.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/497 (84%), Positives = 462/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VLAFAY ICRFLLMLIPP VPSIDVD SDVLDDGNQ +NSFIY+PPRG +
Sbjct: 1 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS VQCYEPATMKYLGY PAL+R EV +RVA+ RKAQK+WAKSSFKQRR FLRILLKY
Sbjct: 61 QSGKIVQCYEPATMKYLGYVPALTRDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQS 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAA+GAPE+LV+VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NA+ TLTPVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVD+ HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS V KIVKSV+
Sbjct: 301 GKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSLVTKIVKSVT 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL GKYDMGALC+ EHSEKL+ LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVI 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNHTM+LMQEEAFGPIMPIMKF++DEEVV+LAN+S+YGLGCAVFSG+Q RAREIA+QI
Sbjct: 421 VNVNHTMRLMQEEAFGPIMPIMKFSSDEEVVRLANESKYGLGCAVFSGNQSRAREIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
GVAA+NDFAS YMCQ
Sbjct: 481 HAGVAAVNDFASTYMCQ 497
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521770|ref|XP_003529524.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/497 (83%), Positives = 460/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VLAFAY ICRFLLMLIPP VPSIDVD SDVLDDGNQ +NSFIY+PPRG +
Sbjct: 1 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS VQCYEPATMKYLGY PAL+ EV +RV++ RKAQK+WAKSSFKQRR FLRILLKY
Sbjct: 61 QSGKIVQCYEPATMKYLGYVPALTHEEVKDRVSKVRKAQKMWAKSSFKQRRLFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQS 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAA+GAPE+LV+VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NAS TL PVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNASNTLIPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVD+ HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS+V KIVKSV+
Sbjct: 301 GKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVT 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL GKYDMGALC+ EHSEKL+ LVNDALDKGAEI+ARG+ GH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGNLGHIGEDAVDQYFPPTVI 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNHTM+LMQEEAFGPIMPIMKF++DEEVV+LANDS+YGLGCAVFSG+Q RAREIA+QI
Sbjct: 421 VNVNHTMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKYGLGCAVFSGNQSRAREIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
GVAA+NDFAS YMCQ
Sbjct: 481 HAGVAAVNDFASTYMCQ 497
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 535 | ||||||
| TAIR|locus:2103425 | 596 | ALDH22A1 "AT3G66658" [Arabidop | 0.928 | 0.833 | 0.845 | 3.6e-231 | |
| DICTYBASE|DDB_G0279613 | 589 | DDB_G0279613 "aldehyde dehydro | 0.805 | 0.731 | 0.417 | 3e-92 | |
| CGD|CAL0001732 | 614 | orf19.1865 [Candida albicans ( | 0.923 | 0.804 | 0.378 | 2.1e-91 | |
| UNIPROTKB|G5EHY1 | 632 | MGCH7_ch7g516 "Succinate-semia | 0.844 | 0.715 | 0.403 | 8.3e-90 | |
| SGD|S000001081 | 644 | MSC7 "Protein of unknown funct | 0.811 | 0.673 | 0.400 | 2.4e-83 | |
| POMBASE|SPBC21C3.15c | 522 | SPBC21C3.15c "aldehyde dehydro | 0.803 | 0.823 | 0.357 | 6.2e-78 | |
| ASPGD|ASPL0000002032 | 642 | AN6636 [Emericella nidulans (t | 0.629 | 0.524 | 0.385 | 5e-60 | |
| UNIPROTKB|P96405 | 487 | MT0233 "PROBABLE ALDEHYDE DEHY | 0.8 | 0.878 | 0.296 | 1.5e-51 | |
| TIGR_CMR|BA_0849 | 479 | BA_0849 "glyceraldehyde-3-phos | 0.790 | 0.883 | 0.324 | 3.1e-51 | |
| TAIR|locus:2027186 | 501 | ALDH10A8 "AT1G74920" [Arabidop | 0.8 | 0.854 | 0.318 | 4e-51 |
| TAIR|locus:2103425 ALDH22A1 "AT3G66658" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2230 (790.1 bits), Expect = 3.6e-231, P = 3.6e-231
Identities = 420/497 (84%), Positives = 459/497 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQ 497
QCGVAAINDFASNYMCQ
Sbjct: 481 QCGVAAINDFASNYMCQ 497
|
|
| DICTYBASE|DDB_G0279613 DDB_G0279613 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 181/434 (41%), Positives = 268/434 (61%)
Query: 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
K+ C PAT K +G +L EV + A+KAQ W +++F +RRQ L+ + I+H
Sbjct: 67 KIDCVNPATGKSMGIVNSLKPDEVKTCLEAAQKAQVEWGQTTFDERRQILQDFIDMFIKH 126
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
+ + E S RDTGKT +A GEI+T+CEK+ +L+ GEK LK E R M K A++
Sbjct: 127 ENELVEASMRDTGKTRFEAMFGEILTSCEKLRYLIQNGEKALKTEDRIVPMLMGTKSARL 186
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
E+HPLGV+G I+ WNYP H+I + AA+F+GN ++KVSE ++ S + +++ L+
Sbjct: 187 EYHPLGVIGIIIPWNYPIHSIISAAAAAIFAGNAALVKVSEWSTHSKILFEHLLRKVLSN 246
Query: 245 VGAPENLVDVITGFAETGEALV-SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303
G NL+ ++ G ETGEALV S VDKI+F+GSPG G+ +M+ AS +LTPV LELGGKD
Sbjct: 247 RGYDPNLIQILPGMGETGEALVRSGVDKILFIGSPGTGKRVMKAASDSLTPVILELGGKD 306
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
IV DDV++ I R + GQNC +ER +VH IY F Q+A + S+ GP
Sbjct: 307 PMIVFDDVELDWALAIVQRGCFINLGQNCISSERVFVHEKIYDQFCKQMADKINSLKQGP 366
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 423
P G +D G++ + +K+++LV A+ +GA +LA G YF PTV+ NV
Sbjct: 367 PEEGHFDFGSMTMPAQVDKVEHLVGTAIKEGATLLAGGKRNPAYPKG--NYFLPTVLANV 424
Query: 424 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 483
M + QEEAFGP+ I+KF+ + ++++ AN + +GLGC++ S RA I ++I G
Sbjct: 425 TENMTIFQEEAFGPVCSIIKFSDEHDLIRKANGTAFGLGCSILSSDIKRAERIGSKISTG 484
Query: 484 VAAINDFASNYMCQ 497
+ IND+ ++Y+ Q
Sbjct: 485 MLTINDYGASYLIQ 498
|
|
| CGD|CAL0001732 orf19.1865 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 192/507 (37%), Positives = 289/507 (57%)
Query: 3 FLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVL---DDGNQTPDNSFIYIPPRGRT 59
F +IV Y +++ P N I+ L ++ +Y PP
Sbjct: 21 FFIGVIVPVLYYVYNKYITAQ-PNNYNKIEAPVKITLPIPEEARPHWKGKRLY-PPSISI 78
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
P K+Q Y PAT +YLG F +R ++DE + A KAQK WA SSF RR+ L+ +
Sbjct: 79 PNEPDKIQSYCPATGQYLGVFNCTTREDMDEMINNASKAQKKWANSSFSLRRKLLKTMAS 138
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI- 178
+I+E+QE I ++ RD+GKT +DAS+GEIM T EK+ W++S GEK L+P R + +
Sbjct: 139 FILENQENIARVACRDSGKTKLDASMGEIMVTLEKLNWIISHGEKVLRPSQRPGPANFLI 198
Query: 179 --HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
K A+V + P+GVV +IVSWNYPFHN+ P++A++F+GN I++K SEN WS ++ +
Sbjct: 199 GMMKNAEVRYEPMGVVTSIVSWNYPFHNLMGPVIASLFTGNAIIVKCSENVVWSSQWFIK 258
Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
++ L + ENLV + F E VS + I F+GS V ++ A+K LTP
Sbjct: 259 FVRKCLQELDIDENLVQLCCCFPNDAEYFVSHPGLSHITFIGSKNVAHHVVSQAAKQLTP 318
Query: 295 VTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGGKDA IV DDV DV ++ + +R QS+GQNC G ER +Y V
Sbjct: 319 CVVELGGKDALIVLDDVKDVQSLSSVILRGTFQSAGQNCIGVERVICLPKVYEQLVEIFT 378
Query: 354 KIVKSVSAGPPL--AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 411
+ +KS G + + DMGA+ +L+ L+ DA+ KGA ++ G
Sbjct: 379 ERIKSFRVGSDIDQLDEIDMGAMISDNRFAQLEGLIEDAVSKGARLIHGGKQYQHPNYPQ 438
Query: 412 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471
YF PT++V+V+ TMK+ QEE FGP++ +++ N E+ V +AN + +GLG ++F + +
Sbjct: 439 GHYFEPTLLVDVDPTMKIFQEEVFGPVLTMIRANDAEDAVNIANGTEFGLGNSIFGSNFN 498
Query: 472 RAREIAAQIQCGVAAINDFASNYMCQV 498
+ +IA Q+Q G AINDFA+ Y+ Q+
Sbjct: 499 QVNQIADQLQSGNVAINDFATFYVAQL 525
|
|
| UNIPROTKB|G5EHY1 MGCH7_ch7g516 "Succinate-semialdehyde dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 187/463 (40%), Positives = 283/463 (61%)
Query: 44 QTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA 103
+TP+ I P + S T +QCY PAT ++LG+ + A +D + QA AQK WA
Sbjct: 87 KTPEMVEILQKPSIKVSGS-TAIQCYNPATGQFLGFVNPATPAAIDRAIEQAATAQKKWA 145
Query: 104 KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE 163
+SF++RR+ LR +L+YI+++QE IC ++ D+GKTMVDA LGEI+ T EK+ W ++ GE
Sbjct: 146 LTSFRERRKVLRSMLQYILDNQEEICRVAGMDSGKTMVDAQLGEILVTVEKLQWTIAHGE 205
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
K L+PE R + M++K+ V + PLGV+ A+VSWNYPFHN+ P+++A+F+GNGI++KV
Sbjct: 206 KALRPERRPTNLLMMYKRNSVHYEPLGVIAALVSWNYPFHNLLGPIISAIFAGNGILVKV 265
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281
SEN +WS ++ I + AL A G +L+ + + + + S + I F+GS V
Sbjct: 266 SENTAWSSSYFASIARGALFAHGYDPSLIQTVACWPQVAGHITSHKGISHITFIGSQAVA 325
Query: 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDV--DVPHVAQIAVRAALQSSGQNCAGAERFY 339
+ +A+K LTPV ELGGKDAFIV D D+ + ++ +R QS+GQNC G ER
Sbjct: 326 HKVAESAAKVLTPVCAELGGKDAFIVLDSAAKDLNRIVEMMLRGTFQSAGQNCIGIERII 385
Query: 340 VHRDIYALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
+Y V +A+ V+ + GP PL D+GA+ ++L++LV DA+ GA +L
Sbjct: 386 ATPAVYDRIVLALAERVRGLRVGPGPLDA--DVGAMVSDASFDRLEHLVADAVRCGARLL 443
Query: 399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF--NTDEEVVKLAND 456
A G + YF PT++V+V M L +EE FGPIM +M+ NT + V+ +AN
Sbjct: 444 AGGKRLIHPQHPSGHYFTPTLVVDVTPDMALAREECFGPIMTLMRAPANTAKAVLDVANA 503
Query: 457 SRYGLGCAVFS-GSQHRAREIAAQIQCGVAAINDFASNYMCQV 498
+GLG +VF S +E+ ++ G+ A+NDFA+ Y Q+
Sbjct: 504 PDFGLGGSVFGRDSDPVLKEVVRGLRTGMVAVNDFATYYAVQL 546
|
|
| SGD|S000001081 MSC7 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 184/459 (40%), Positives = 269/459 (58%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
P+ +QC+ PAT +YLG FP+ + A++DE V++A KAQ W S F +R + L L
Sbjct: 106 PEEPNFIQCHCPATGQYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLHD 165
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI- 178
YI+ +Q+LI ++ RD+GKTM+DAS+GEI+ T EKI W + G++ L+P R +
Sbjct: 166 YILNNQDLIARVACRDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFM 225
Query: 179 --HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
+K A++ + PLGV+ +IVSWNYPFHN+ P++AA+F+GN IV+K SE WS F+
Sbjct: 226 KWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVE 285
Query: 237 IIQAALAAVGAPENLVDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289
+I+ L A +LV + T ++ S I F+GS V I++ A+
Sbjct: 286 LIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAA 345
Query: 290 KTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
K+LTPV +ELGGKDAFIV D ++ ++ I +R QSSGQNC G ER V ++ Y
Sbjct: 346 KSLTPVVVELGGKDAFIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY--- 402
Query: 349 VSQVAKIVKS-VSAGPPLAGK-------YDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
+ KI+ ++A P G DMGA+ ++L+ LV DA+ KGA +L
Sbjct: 403 -DDLVKILNDRMTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQG 461
Query: 401 GS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS F H + YF PT++V+V MK+ Q E FGPI+ +MK + V+LAN + +
Sbjct: 462 GSRFKH-PKYPQGHYFQPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPF 520
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQV 498
GLG +VF +A +Q G AINDFA+ Y+CQ+
Sbjct: 521 GLGGSVFGADIKECNYVANSLQTGNVAINDFATFYVCQL 559
|
|
| POMBASE|SPBC21C3.15c SPBC21C3.15c "aldehyde dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 155/434 (35%), Positives = 252/434 (58%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
CY P LG +++++D+ + A +AQK W +SF +RR FL+ L + II +Q+
Sbjct: 7 CYCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDK 66
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
EI+ +DTGKT+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K V++
Sbjct: 67 YAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYE 126
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
PLGV+ A+VSWNYP HN P+++A+F+GN IV+K SE +WS Y ++++ L ++G
Sbjct: 127 PLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGH 186
Query: 248 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
LV IT + + L S + I F+GS + +++ +A+K LTP+ LELGGKD
Sbjct: 187 SPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPC 246
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
I+ DD + + I +R QS+GQNC G ER +Y ++++ + ++ G
Sbjct: 247 ILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYT 306
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVN 424
DMGA+ + L++L+ DA+ KGA ++ G F H + YF PT++V+
Sbjct: 307 QNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQH-PKYPKGNYFLPTLLVDAT 365
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
+ MK+ QEE F PI + + + E +++AN + +GLG +VF + + ++ G+
Sbjct: 366 NEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGM 425
Query: 485 AAINDFASNYMCQV 498
A+NDF + Y+ Q+
Sbjct: 426 VAVNDFGAFYLLQM 439
|
|
| ASPGD|ASPL0000002032 AN6636 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 135/350 (38%), Positives = 201/350 (57%)
Query: 26 PNVPSIDV--DASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG--YFP 81
PN P I+ + S D + + + I RG+ +E + Y PA + LG P
Sbjct: 60 PNPPEINPHWEGSKWEDLPQGSEERNVIEGQIRGQW--NENLIMSYCPADGRVLGSGIKP 117
Query: 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141
A + +VD + A +AQ+ WA ++F +RR+ L+ LLKY++EHQ+ I D+GKT V
Sbjct: 118 ATAD-DVDRAIQAASRAQEQWATTTFAERRRVLKTLLKYVLEHQDEIVIACCLDSGKTKV 176
Query: 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
DA+ GE + T EK+ W + GE+ L PE R + M++KK +V + PLGVV A VSWNYP
Sbjct: 177 DATFGETLVTAEKLKWTIDHGERALSPESRPTNFLMMYKKNQVIYEPLGVVSACVSWNYP 236
Query: 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 261
FHN +P+++A+F+GNGIV+K SE +WS ++ II+ AL G P +LV + +
Sbjct: 237 FHNFISPVISAIFAGNGIVVKPSEQTAWSSVYFLNIIRGALENCGHPRDLVQSVVCLPKV 296
Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV----DVPH 315
+ L S + +I F+GS V + +A+K LTPVT+ELGGKD ++ DD +V
Sbjct: 297 ADHLTSHPGIAQITFIGSRPVAHKVCESAAKALTPVTVELGGKDPSVILDDSRTISEVTS 356
Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
VA + +R QS+GQNC G ER +Y + V +K++ G L
Sbjct: 357 VASVLMRGVFQSAGQNCIGVERVIALPGVYDKLLDTVTSRIKALRLGSVL 406
|
|
| UNIPROTKB|P96405 MT0233 "PROBABLE ALDEHYDE DEHYDROGENASE" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 133/448 (29%), Positives = 228/448 (50%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I + P + ++ PAT +Y+G P + A+VD VA AR A W +
Sbjct: 11 LFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPH 70
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WL 166
+R + +K + E ++L ++ + +TG+ M + + + +K W
Sbjct: 71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT 130
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
+ S G+S++ ++ P+GVVGAIV+WN P N + A+ +G IV+K +
Sbjct: 131 ETRTGSYGQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMI 284
+ + A VG PE ++ V+ G ETG+AL S+ +D F GS VGR +
Sbjct: 185 TPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREV 240
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
R A++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R R
Sbjct: 241 GRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
Y V+ V V ++ GPP +G L + +++ + +++GA ++ G G
Sbjct: 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG--G 358
Query: 405 HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
EG + +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +ANDS YGL
Sbjct: 359 R-PEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAG 417
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDFA 491
+V++ + +I+ QI+ G IN +A
Sbjct: 418 SVWTTDVPKGIKISQQIRTGTYGINWYA 445
|
|
| TIGR_CMR|BA_0849 BA_0849 "glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 148/456 (32%), Positives = 242/456 (53%)
Query: 45 TPDNSF-IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA 103
T N++ Y+ R S ++ P + +G A++R EVDE +A A++AQK WA
Sbjct: 2 TTSNTYKFYLNGEWRESSSGETIEIPSPYLHEVIGQVQAITRGEVDEAIASAKEAQKSWA 61
Query: 104 KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-- 161
++S + R ++L ++ Q+ I +I ++ GK DA E++ T + I + + E
Sbjct: 62 EASLQDRAKYLYKWADELVNMQDEIADIIMKEVGKGYKDAKK-EVVRTADFIRYTIEEAL 120
Query: 162 ---GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA-AVFSGN 217
GE + + +S K A ++ PLGVV AI +NYP N+ LA A+ GN
Sbjct: 121 HMHGESMMGDSFPGGTKS---KLAIIQRAPLGVVLAIAPFNYPV-NLSAAKLAPALIMGN 176
Query: 218 GIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIF 274
++ K + + SG ++++A L G P+ LV+V TG G+ LV ++ + F
Sbjct: 177 AVIFKPATQGAISG---IKMVEA-LHKAGLPQGLVNVATGRGSVIGDYLVEHEGINMVSF 232
Query: 275 VGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 334
G G+ + + AS + P+ LELGGKD IV +D D+ A V A SGQ C
Sbjct: 233 TGGTNTGKHLAKKAS--MIPLVLELGGKDPGIVREDADLQDAANHIVSGAFSYSGQRCTA 290
Query: 335 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH--SEKLQNLVNDALD 392
+R VH ++ VS V + V +S G P + D + L++ ++ +Q LV+DA++
Sbjct: 291 IKRVLVHENVADELVSLVKEQVAKLSVGSP---EQDSTIVPLIDDKSADLVQGLVDDAVE 347
Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 452
KGA I+ G+ E + Y PT+I +V MK+ EE FGPI+PI++ ++DE+ ++
Sbjct: 348 KGATIV----IGNKRERNLI-Y--PTLIDHVTEEMKVAWEEPFGPILPIIRVSSDEQAIE 400
Query: 453 LANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
+AN S +GL +VF+ ++A IA +I+ G IN
Sbjct: 401 IANKSEFGLQASVFTKDINKAFAIANKIETGSVQIN 436
|
|
| TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 143/449 (31%), Positives = 229/449 (51%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKS 105
++I R P + ++ PAT + +G PA + +VD V AR+A K WAK+
Sbjct: 10 LFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
R ++LR + + E + + ++ + D GK + +A + + C + L+EG
Sbjct: 70 PGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEG-- 127
Query: 165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
L + ++ M K+ V PLGVVG I WNYP + ++ +G ++K
Sbjct: 128 -LDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGV 280
SE AS + C I VG P +++V+TGF +E G L S VDKI F GS
Sbjct: 187 SELASVT-CLELADI---CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFAT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G +M A++ + PV++ELGGK IV DDVD+ A+ A+ ++GQ C+ R V
Sbjct: 243 GSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I + F+ ++ K K++ P+ +G + EK+ ++ A +GA IL
Sbjct: 303 HESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHG 362
Query: 401 GSFG-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS HL +G + PT+I +V +M++ +EE FGP++ + F +++E ++LANDS Y
Sbjct: 363 GSRPEHLEKGF---FIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHY 419
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
GLG AV S R I+ + G+ IN
Sbjct: 420 GLGAAVISNDTERCDRISEAFEAGIVWIN 448
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| B0VST2 | BETB_ACIBS | 1, ., 2, ., 1, ., 8 | 0.3030 | 0.8037 | 0.8775 | yes | no |
| Q0WSF1 | AL221_ARATH | 1, ., 2, ., 1, ., 3 | 0.8450 | 0.9289 | 0.8338 | yes | no |
| Q9P7K9 | YOSF_SCHPO | 1, ., 2, ., 1, ., - | 0.3501 | 0.8130 | 0.8333 | yes | no |
| A3M365 | BETB_ACIBT | 1, ., 2, ., 1, ., 8 | 0.3008 | 0.8037 | 0.8775 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pg.C_LG_VIII0932 | hypothetical protein (594 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 535 | |||
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 0.0 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-142 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-141 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-130 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-128 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-101 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-100 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 4e-98 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-94 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 2e-92 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 3e-92 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 2e-89 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 2e-88 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 5e-88 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 2e-84 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 3e-84 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 8e-83 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-82 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 5e-81 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-79 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 5e-79 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-78 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-78 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 2e-77 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 2e-77 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 9e-77 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-76 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 2e-76 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 3e-76 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-75 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 2e-75 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-75 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 3e-75 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 2e-74 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 3e-74 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 4e-74 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 5e-74 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 5e-73 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 7e-73 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-72 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 5e-72 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 7e-72 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-70 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 2e-70 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 3e-70 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 4e-70 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-69 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 3e-68 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 3e-68 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-67 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 5e-67 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 8e-67 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 2e-64 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-64 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 4e-64 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 6e-64 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 3e-63 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 4e-63 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 2e-62 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 5e-62 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 3e-60 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-59 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-58 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 9e-57 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-56 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 2e-56 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 3e-56 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-55 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 2e-55 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 5e-55 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 8e-55 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-54 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 3e-54 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 7e-52 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 4e-51 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 6e-51 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 2e-50 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-49 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-49 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 8e-49 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 8e-48 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-46 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-46 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 3e-46 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 6e-46 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-44 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 5e-43 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-40 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 5e-39 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-37 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-35 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-34 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-34 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-31 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 4e-29 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 3e-26 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-24 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 6e-24 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 8e-24 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-23 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 3e-21 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 4e-20 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-18 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 9e-17 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 5e-15 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 6e-15 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 4e-13 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-10 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 7e-10 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 8e-09 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-08 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-07 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 2e-05 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 3e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 6e-05 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 4e-04 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 0.001 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 0.001 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 702 bits (1814), Expect = 0.0
Identities = 226/431 (52%), Positives = 295/431 (68%), Gaps = 2/431 (0%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
Y+PAT ++LG PA + +VDE +A AR AQ+ WAK+SF +RR+ LR LLKYI+E+QE I
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
C ++ RDTGKTMVDASLGEI+ TCEKI W L GEK L+PE R G M +K+A+VE+ P
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP 120
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGVVGAIVSWNYPFHN+ P++AA+F+GN IV+KVSE +WS F+ II+ LAA G
Sbjct: 121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHD 180
Query: 249 ENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
+LV ++T ET EAL S D I F+GSP VG+ +M A+++LTPV LELGGKD I
Sbjct: 181 PDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
V DD D+ +A I +R QSSGQNC G ER VH IY + + V+++ GPPL
Sbjct: 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLD 300
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 426
G D+GA+ ++L+ LV DA++KGA +LA G E YFPPT++V+V
Sbjct: 301 GDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPD 360
Query: 427 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486
MK+ QEE FGP+M +MK + DEE V++AN + YGLG +VF RAR IA+Q++ G+ A
Sbjct: 361 MKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVA 420
Query: 487 INDFASNYMCQ 497
INDF NY Q
Sbjct: 421 INDFGVNYYVQ 431
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Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 416 bits (1072), Expect = e-142
Identities = 159/427 (37%), Positives = 229/427 (53%), Gaps = 10/427 (2%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + LG P AEV VA+AR AQ+ WA + R Q L + + +H + + E
Sbjct: 3 PATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAE 62
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ +TGK DA E++ E I W + L P +G M +KKA VE+ P G
Sbjct: 63 LLHAETGKPRADA-GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYG 121
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
VVG I WNYP ++ A+ +GN +V+K SE G + A AA G P+
Sbjct: 122 VVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGEL----LAEAWAAAGPPQG 177
Query: 251 LVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309
++ V+TG TG AL+ + VDK+ F GS GR +M A++ L PV LELGGKD IV
Sbjct: 178 VLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLA 237
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ A AV A+ ++GQ C ER YVH +Y FV+++ +++ G G
Sbjct: 238 DADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDA 297
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
D+G + + ++ V+DA+ KGA+ L G G S G ++ PTV+ +V H M +
Sbjct: 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALT-G--GARSNGG-GPFYEPTVLTDVPHDMDV 353
Query: 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
M+EE FGP++P+M ++E + LANDSRYGL +VFS RA IA +++ G +IND
Sbjct: 354 MREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSIND 413
Query: 490 FASNYMC 496
Sbjct: 414 VLLTAGI 420
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4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 415 bits (1068), Expect = e-141
Identities = 142/404 (35%), Positives = 208/404 (51%), Gaps = 14/404 (3%)
Query: 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
D VA AR A K WA +R LR L + E +E + + + +TGK ++ +LGE+
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEV 59
Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
+ + + S + A V PLGVVGAI WN+P
Sbjct: 60 ARAADTFRYYAGLARRLHGEVIPSPDP---GELAIVRREPLGVVGAITPWNFPLLLAAWK 116
Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS 267
+ A+ +GN +V+K SE + ++ A G P +++V+TG E G AL S
Sbjct: 117 LAPALAAGNTVVLKPSELTPLTALLLAELLAEA----GLPPGVLNVVTGDGDEVGAALAS 172
Query: 268 S--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325
VDKI F GS VG+ IMR A++ L VTLELGGK IV DD D+ + AV A
Sbjct: 173 HPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232
Query: 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385
++GQ C A R VH IY FV ++ + VK++ G PL DMG L +++
Sbjct: 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLA 292
Query: 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445
+ DA +GA++L G +G + PPTV+ +V+ M + QEE FGP++P++ F
Sbjct: 293 YIEDAKAEGAKLLCGGKRLEGGKGY---FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349
Query: 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
+EE ++LAND+ YGL VF+ RA +A +++ G IND
Sbjct: 350 DEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWIND 393
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 386 bits (995), Expect = e-130
Identities = 147/435 (33%), Positives = 228/435 (52%), Gaps = 16/435 (3%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
S ++ PAT + + PA + +VD VA AR A K WAK+ +R L
Sbjct: 2 VDSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAA 61
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ E ++ + E+ + +TGK + +A GE+ + + + K L+ E S
Sbjct: 62 DLLEERRDELAELETLETGKPLAEA-RGEVPRAIDTLRYYAGLARK-LEGETLPSDPG-- 117
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
A PLGVVGAI WN+P + A+ +GN +V+K SE + +
Sbjct: 118 -VLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
+ A G P +++V+TG +E G+ALV VDK+ F GS VGR I + A+K L V
Sbjct: 177 EEA----GLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRV 232
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
TLELGGK+ IV DD D+ + AV A ++GQ C R VH IY FV ++ +
Sbjct: 233 TLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEA 292
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
KS+ G PL D+G L + E++ + + DA ++GA++L G G L +G +
Sbjct: 293 AKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAG-LEKGY---FV 348
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PTV+ +V M++ QEE FGP++ ++ F ++E ++LAND+ YGL VF+ RA
Sbjct: 349 EPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALR 408
Query: 476 IAAQIQCGVAAINDF 490
+A +++ G+ IND+
Sbjct: 409 VARRLEAGMVWINDY 423
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 382 bits (984), Expect = e-128
Identities = 142/433 (32%), Positives = 220/433 (50%), Gaps = 18/433 (4%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
+ ++ PAT + + PA + +VD VA AR A + W++ S ++R LR + +
Sbjct: 12 GASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLL 71
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
E + + + +TGK + +A GEI + I + E + + S
Sbjct: 72 EARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEEARRLEGETIPTDKGSKAL-- 128
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
V PLGVVGAI WN+P + A+ +GN +V+K SE S + A
Sbjct: 129 --VRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA 186
Query: 242 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
G P +++V+TG AE G+ALV+ VD I F GS VGR I A+ L PVTLE
Sbjct: 187 ----GLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLE 242
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV +D D+ AV A ++GQ C A R VH +Y FV ++ S
Sbjct: 243 LGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAAS 302
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G PL D+G L E ++++ + DA+ +GA +LA G + PT
Sbjct: 303 LKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG------GYFVEPT 356
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
++ V M++ +EE FGP++P+++F +EE ++LAND+ YGL A+F+ RA +A
Sbjct: 357 ILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVAR 416
Query: 479 QIQCGVAAINDFA 491
+++ G+ IND+
Sbjct: 417 RLEAGMVGINDYT 429
|
Length = 472 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 312 bits (801), Expect = e-101
Identities = 149/431 (34%), Positives = 216/431 (50%), Gaps = 29/431 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + +G P A+ D + A A K W K++ ++R LR I E E +
Sbjct: 4 PATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLAR 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
+ + + GK + +A GE+ + W E R GR K+ V
Sbjct: 64 LLTLEQGKPLAEA-RGEVDYAASFLEWFAEEAR-------RIYGRTIPSPAPGKRILVIK 115
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GVV AI WN+P I P LAA G +V+K +E S + + A
Sbjct: 116 QPVGVVAAITPWNFPAAMITRKIAPALAA---GCTVVLKPAEETPLSALALAELAEEA-- 170
Query: 244 AVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
G P +++V+TG AE GEAL +S V KI F GS VG+++M A+ T+ V+LELG
Sbjct: 171 --GLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELG 228
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
G FIV DD D+ A+ + +++GQ C A R YVH IY FV ++ + VK +
Sbjct: 229 GNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK 288
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
G L DMG L EK++ LV DA+ KGA++L G G ++ PTV+
Sbjct: 289 VGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGK-RLGLGGY---FYEPTVL 344
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V M +M EE FGP+ PI+ F+T++EV+ AND+ YGL VF+ RA +A +
Sbjct: 345 TDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEAL 404
Query: 481 QCGVAAINDFA 491
+ G+ IN
Sbjct: 405 EAGMVGINTGL 415
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 309 bits (793), Expect = e-100
Identities = 132/424 (31%), Positives = 202/424 (47%), Gaps = 19/424 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + P S V + +AR AQK W ++R+ + ++ + + + I E
Sbjct: 3 PIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAE 62
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE--YRSSG--RSMIHKKAKVEF 186
+ G+ + + GEI E+ +++S E+ L G R + +
Sbjct: 63 ELTWQMGRP-IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRRE------ 115
Query: 187 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
PLGVV I WNYP+ N ++ A+ +GN +++K S G AA A G
Sbjct: 116 -PLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGER----FAAAFAEAG 170
Query: 247 APENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
PE + V+ ET AL++ +D + F GS GR I R A+ V LELGGKD
Sbjct: 171 LPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDP 230
Query: 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
V D D+ A+ V A +SGQ+C ER YVH IY FV +VK G P
Sbjct: 231 AYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP 290
Query: 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424
L +G + ++ ++ + DA+ KGA L G+ + Y PTV+ NV+
Sbjct: 291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGG-AYLAPTVLTNVD 349
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
H+M++M+EE FGP++ IMK +D E + L NDS YGL +V++ RA + Q++ G
Sbjct: 350 HSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGT 409
Query: 485 AAIN 488
+N
Sbjct: 410 VFMN 413
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 304 bits (780), Expect = 4e-98
Identities = 138/430 (32%), Positives = 214/430 (49%), Gaps = 38/430 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + P S A++D+ VA A+ A W+ + ++RR L + I + E +
Sbjct: 4 PATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELAR 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + + GK + +A E+ + WL L E ++ ++ PLG
Sbjct: 64 LLTLEQGKPLAEAQ-FEVGGA---VAWLRYTASLDLPDEVIEDDD---TRRVELRRKPLG 116
Query: 191 VVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
VV AIV WN+P +LA A+ +GN +V+K S + Q L
Sbjct: 117 VVAAIVPWNFPL------LLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVL-- 168
Query: 245 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302
P +++V++G E G AL S + KI F GS G+ +M +A+KTL VTLELGG
Sbjct: 169 ---PPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGN 225
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
DA IV DVD+ VA A +SGQ CA +R YVH IY F + + K+ G
Sbjct: 226 DAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVG 285
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHLSEGAVDQYFPPT 418
L +G + +K++ LV DA KGA++LA G G+ + PPT
Sbjct: 286 DGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY--------FIPPT 337
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
++ + +++ EE FGP++P++K++ ++EV+ ANDS YGLG +V+S RA +A
Sbjct: 338 IVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVAR 397
Query: 479 QIQCGVAAIN 488
+++ G IN
Sbjct: 398 RLEAGTVWIN 407
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 294 bits (756), Expect = 1e-94
Identities = 135/428 (31%), Positives = 218/428 (50%), Gaps = 13/428 (3%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
P T + LG P + A+V+ A+AR AQ+ WA F +R ++E ++ +
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELL 61
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 189
++ +TGK A E++ + E+ LKP R ++ + V P
Sbjct: 62 DLIQLETGKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVL-TRTTVNRRPK 119
Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
GVVG I WNYP + + A+ +GN +V+K + + + ++ A G P
Sbjct: 120 GVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA----GLPR 175
Query: 250 NLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308
+L V+TG +E G A+V + D ++F GS GR++ A + L +LELGGK+ IV
Sbjct: 176 DLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVL 235
Query: 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368
+D D+ A AVRA ++GQ C ER YVH +Y FV + +++ G L
Sbjct: 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYG 295
Query: 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTM 427
DMG+L +++ V+DA+ KGA +LA G + + YF PTV+ V M
Sbjct: 296 PDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR----ARPDLGPYFYEPTVLTGVTEDM 351
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+L EE FGP++ I + D+E ++LAND+ YGL +V++ R R IAA+++ G +
Sbjct: 352 ELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNV 411
Query: 488 ND-FASNY 494
N+ +A+ +
Sbjct: 412 NEGYAAAW 419
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 2e-92
Identities = 149/445 (33%), Positives = 213/445 (47%), Gaps = 53/445 (11%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PAT + P S A+VD VA AR A W K + +R + LR L I + E +
Sbjct: 4 PATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEEL 63
Query: 129 CEISSRDTGKTM--VDASLGEIMTT-------CEKI--TWLLSEGEKWLKPEYRSSGRSM 177
E+ +RD GK + A + + +KI + + K +Y + R
Sbjct: 64 AELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVD-----KGDYLNFTRRE 118
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFN------PMLAAVFSGNGIVIKVSENASWSG 231
PLGVV AI WN P + P LAA GN +V+K SE+ S
Sbjct: 119 ----------PLGVVAAITPWNSP---LLLLAKKLAPALAA---GNTVVLKPSEHTPAST 162
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
++ + A G P +V+V+TGF ETGEALV V KI F G GR I R A
Sbjct: 163 LELAKLAEEA----GFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
++ L PVTLELGGK IV DD D+ V ++GQ C R V R IY F
Sbjct: 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEF 278
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGH 405
V ++ +++ G PL + MG L EK++ V A ++GA +L R S
Sbjct: 279 VERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGAD 338
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465
L G +F PT++ +V + M++ QEE FGP++ ++ F+ +EE + LANDS YGL +
Sbjct: 339 LGAG---YFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGI 395
Query: 466 FSGSQHRAREIAAQIQCGVAAINDF 490
++ RA +A I+ G +N +
Sbjct: 396 WTRDLARAHRVARAIEAGTVWVNTY 420
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 289 bits (742), Expect = 3e-92
Identities = 144/449 (32%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
YI S + PAT + + PA + + D V A AQK W + +R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWL 166
+LR L I E+ + + ++ + GKT+ A E+ T + I ++ EGE +
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGE--I 117
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
P R + I K P+GVV I+ WN+PF I + A+ +GN IVIK SE
Sbjct: 118 IPSDRPNENIFIFKV------PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEE 171
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRM 283
+ + ++ A G P +++++TG + G+ALV+ V I GS G+
Sbjct: 172 TPLNALEFAELVDEA----GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQK 227
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFY 339
IM A++ +T V+LELGGK IV D D+ +AV+A + S GQ C AER Y
Sbjct: 228 IMEAAAENITKVSLELGGKAPAIVMKDADL----DLAVKAIVDSRIINCGQVCTCAERVY 283
Query: 340 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
VH DIY F+ ++ + +K+V G P DMG L +K++ +V A++ GA +L
Sbjct: 284 VHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLT 343
Query: 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
G +G ++ PTV+ NV M+++QEE FGP++P++KF++ +E ++LANDS Y
Sbjct: 344 GGKRPEGEKG---YFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY 400
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
GL +++ + + A +++ G IN
Sbjct: 401 GLTSYIYTENLNTAMRATNELEFGETYIN 429
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 2e-89
Identities = 142/451 (31%), Positives = 219/451 (48%), Gaps = 37/451 (8%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
+ + P T + L P + A+V+ A+AR AQ+ WA + ++R +LL
Sbjct: 27 DGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRER---AAVLL 83
Query: 119 KY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
++ ++E++E + ++ +TGK A E++ + K L P R+
Sbjct: 84 RFHDLVLENREELLDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGAL 142
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
++ K P GVVG I WNYP + + A+ +GN +V+K +
Sbjct: 143 PVL-TKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT----- 196
Query: 236 RIIQAALAAV------GAPENLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNA 288
ALAAV G P +L V+TG G ALV + D ++F GS GR++ A
Sbjct: 197 -----ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQA 251
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
+ L +LELGGK+ IV DD D+ A AVRA ++GQ C ER YVH IY F
Sbjct: 252 GRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEF 311
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL----ARGSFG 404
V V+++ G DMG+L E + V+DA+ KGA +L AR G
Sbjct: 312 VRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
L ++ PTV+ V M+L +EE FGP++ + +E V+ AND+ YGL +
Sbjct: 372 PL-------FYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNAS 424
Query: 465 VFSGSQHRAREIAAQIQCGVAAIND-FASNY 494
V++G R R IAA+I+ G +N+ +A+ +
Sbjct: 425 VWTGDTARGRAIAARIRAGTVNVNEGYAAAW 455
|
Length = 524 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 2e-88
Identities = 140/439 (31%), Positives = 209/439 (47%), Gaps = 39/439 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+ PAT + L P AEVD VA A++A W++ S +R + L + I + +
Sbjct: 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADEL 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKI-----TWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
+ S DTGK + A +I L +GE Y G ++ +
Sbjct: 62 ALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGE-----SYPQDGGALNY---- 112
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRI 237
V P+GV G I WN P ML A+ GN +V+K SE + +
Sbjct: 113 VLRQPVGVAGLITPWNLPL------MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAEL 166
Query: 238 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
A G P +V+V+ GF E G ALV+ VD I F G GR IMR A+ L P
Sbjct: 167 ANEA----GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKP 222
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
V+LELGGK+ IV D D+ AVR++ ++G+ C R V R IY F+ + +
Sbjct: 223 VSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVE 282
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS---FGHLSEGAV 411
K++ G PL ++G L EH EK+ V A +GA IL G L G
Sbjct: 283 RAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGY- 341
Query: 412 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471
+ PTVI +++ ++ QEE FGP++ ++ F+ +EE ++LAND+ YGL V++
Sbjct: 342 --FVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399
Query: 472 RAREIAAQIQCGVAAINDF 490
RA +A +++ G +N +
Sbjct: 400 RAHRVARRLEAGTVWVNCW 418
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 277 bits (711), Expect = 5e-88
Identities = 127/419 (30%), Positives = 201/419 (47%), Gaps = 43/419 (10%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
++ + +A A W K+SF +R LR L + E ++ + + + + GK + +A E
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAE 59
Query: 148 IMTTCEKITWLLS----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
+ EK W+ E +L E + KA V + PLGVV I+ WN+PF
Sbjct: 60 V----EKCAWICRYYAENAEAFLADEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFW 111
Query: 204 NIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 260
+F P L A GN +++K + N I+ G PE + + +
Sbjct: 112 QVFRFAAPNLMA---GNTVLLKHASNVPGCA----LAIEELFREAGFPEGVFQNL--LID 162
Query: 261 TGEALVSSVDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 311
+ + V+ II GS GR + A K L LELGG D FIV DD
Sbjct: 163 SDQ-----VEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA 217
Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
D+ + AV+ LQ++GQ+C A+RF VH D+Y F+ + + + ++ G P+ D+
Sbjct: 218 DLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDL 277
Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
G L + ++L V +A+ GA +L G GA ++PPTV+ +V M
Sbjct: 278 GPLARKDLRDELHEQVEEAVAAGATLLLGGKR-PDGPGA---FYPPTVLTDVTPGMPAYD 333
Query: 432 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
EE FGP+ ++K +EE + LANDS +GLG +VF+ RA +A +++ G+ IN
Sbjct: 334 EELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGM 392
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 268 bits (688), Expect = 2e-84
Identities = 132/429 (30%), Positives = 207/429 (48%), Gaps = 23/429 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQELIC 129
PAT + +G P A+VD +A AR+A S ++R + LR L + + +E +
Sbjct: 4 PATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELR 63
Query: 130 EISSRDTGKTM-------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA 182
+ + G + VD +G + + E + + GR ++ ++
Sbjct: 64 ALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRRE- 122
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GVV AI WN+PF + A+ +GN +V+K + + S II
Sbjct: 123 -----PVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII---- 173
Query: 243 AAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
A P +V+V+TG GEAL + VD + F GS VGR IM A+ TL V LEL
Sbjct: 174 AETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLEL 233
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK A IV DD D+ A AV + ++GQ CA R V R Y V +A +++
Sbjct: 234 GGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEAL 293
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G P MG L ++++ + D+GA ++ G G + Y PT+
Sbjct: 294 PVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG--GRPAGLDKGFYVEPTL 351
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+V++ M++ QEE FGP++ ++ ++ D+E V++ANDS YGL V+S RA +A +
Sbjct: 352 FADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARR 411
Query: 480 IQCGVAAIN 488
I+ G IN
Sbjct: 412 IRTGSVGIN 420
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 3e-84
Identities = 135/414 (32%), Positives = 198/414 (47%), Gaps = 33/414 (7%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
+VD A A AQK WA + ++R LR + + E ++ I + R++G T A+
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-F 59
Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR---SMIH-KKAKVEFHPLGVVGAIVSWNYPF 202
E+ +L E R G S + K++ V PLGVVG I +N+P
Sbjct: 60 EVGAAIA----ILREAAGLP---RRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPL 112
Query: 203 H---NIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RIIQAALAAVGAPENLVDVITG- 257
P LA GN +V+K +G I + A G P+ +++V+ G
Sbjct: 113 ILAMRSVAPALAL---GNAVVLKPDSRTPVTGGLLIAEIFEEA----GLPKGVLNVVPGG 165
Query: 258 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315
+E G+ALV V I F GS VGR I A + L V LELGG + IV DD D+
Sbjct: 166 GSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDL 225
Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 375
A A GQ C A R VH +Y FV ++ K++ G P +G L
Sbjct: 226 AVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLI 285
Query: 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 435
+++ +V DA+ GA +L G++ EG + PTV+ +V M + +EE F
Sbjct: 286 NERQVDRVHAIVEDAVAAGARLLTGGTY----EGLF---YQPTVLSDVTPDMPIFREEIF 338
Query: 436 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
GP+ P++ F+ DEE V+LAND+ YGL AVF+ RA A +++ G+ IND
Sbjct: 339 GPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHIND 392
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 264 bits (678), Expect = 8e-83
Identities = 136/437 (31%), Positives = 205/437 (46%), Gaps = 36/437 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
EPAT + L +VD V A+ AQK W+ +S +R + LR + E + I
Sbjct: 2 IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEI 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK------- 181
+ + D GK + +A + +I ++ + + EY + + +
Sbjct: 62 ARLETIDNGKPIEEARV-DIDSSADCL-------------EYYAGLAPTLSGEHVPLPGG 107
Query: 182 --AKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
A PLGV I +WNYP P LA GN +V K S +
Sbjct: 108 SFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALAC---GNAMVYKPSPFTPLTALLLAE 164
Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
I+ A G P+ + +V+ G ETG+ L V K+ F GS G+ +M A+K +
Sbjct: 165 ILTEA----GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKH 220
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
VTLELGGK I+ DD D+ + A+ A S GQ C+ R +V R I F ++ +
Sbjct: 221 VTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVE 280
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-Q 413
K + G PL MGAL EH EK+ + A +GA++L G +G +
Sbjct: 281 RTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGF 340
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
Y P V+ + M +++EE FGP+M I+ F+T+EEV++ AND+ YGL VF+ RA
Sbjct: 341 YVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRA 400
Query: 474 REIAAQIQCGVAAINDF 490
+ AQ+Q G IN +
Sbjct: 401 HRVIAQLQAGTCWINTY 417
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 1e-82
Identities = 137/434 (31%), Positives = 209/434 (48%), Gaps = 23/434 (5%)
Query: 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEH 124
PAT + L A A+VD VA AR+A VW++ S +R+ L L I H
Sbjct: 5 ATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAH 64
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
++ + + + D GK + DA ++ + W +K + E +G + A +
Sbjct: 65 RDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDK-VYGEVAPTGPDAL---ALI 120
Query: 185 EFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
PLGVVGA+V WN+P P LAA GN +V+K +E + + R+ + A
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAA---GNSVVLKPAEQSPLTA---LRLAELA 174
Query: 242 LAAVGAPENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTL 297
L A G P +++V+ GF T GEAL VD + F GS VGR + + ++ L V L
Sbjct: 175 LEA-GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233
Query: 298 ELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
E GGK IV D D+ A+ A + G+ C+ R VH I F+ +V
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
+ G PL MGAL H +K+ + +GA ++A G G +
Sbjct: 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETG--GFFVE 351
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV V M++ +EE FGP++ ++ F+++EE V LANDS YGL +V++ RA +
Sbjct: 352 PTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRV 411
Query: 477 AAQIQCGVAAINDF 490
A +++ G +N F
Sbjct: 412 ARRLRAGTVWVNCF 425
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 5e-81
Identities = 95/275 (34%), Positives = 137/275 (49%), Gaps = 11/275 (4%)
Query: 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
AR A K WA +R LR + + E +E + + + +TGK + +LGE+ +
Sbjct: 3 ARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE-EALGEVARAIDT 61
Query: 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 214
+ +K PE S +A V PLGVVG I WN+P + A+
Sbjct: 62 FRYAAGLADKLGGPELPSPDP---GGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDK 271
+GN +V+K SE + ++Q A G P +V+V+ G E G AL+S VDK
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEA----GLPPGVVNVVPGGGDEVGAALLSHPRVDK 174
Query: 272 IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQN 331
I F GS VG+ IM+ A++ L PVTLELGGK IV +D D+ + AV A ++GQ
Sbjct: 175 ISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQI 234
Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
C A R VH IY FV ++ ++ V P+A
Sbjct: 235 CTAASRLLVHESIYDEFVEKLVTVLVDVDPDMPIA 269
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 2e-79
Identities = 133/440 (30%), Positives = 214/440 (48%), Gaps = 26/440 (5%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILL 118
++ P+T + + A +VD+ V ARKA + W+K + ++R + L L
Sbjct: 19 SSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLA 78
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ ++++L+ I + D+GK +LG++ I + +K G+++
Sbjct: 79 DLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADK-------IQGKTIP 131
Query: 179 HKKAKVEF---HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGC 232
K+ + P GV G I+ WNYP P LAA GN +VIK +EN S
Sbjct: 132 TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAA---GNTVVIKPAENTPLSLL 188
Query: 233 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
++ +++ A G P +V++I G+ A G AL VDKI F GS GR++M+ A+
Sbjct: 189 YFANLVKEA----GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA 244
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
+ L VTLE GGK +V +D D+ + A + +SGQNC R YV IY FV
Sbjct: 245 QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFV 304
Query: 350 SQVAKIVKSVSA-GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ + VK G P +G +++ + + +GA+ L G
Sbjct: 305 EKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK-LVYGGEKAPEG 363
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
+ PPT+ +V M++++EE FGP++ I KF T EE +K AND+ YGL AVF+
Sbjct: 364 LGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTK 423
Query: 469 SQHRAREIAAQIQCGVAAIN 488
RA +A +++ G+ IN
Sbjct: 424 DIRRAHRVARELEAGMVWIN 443
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 254 bits (652), Expect = 5e-79
Identities = 142/435 (32%), Positives = 221/435 (50%), Gaps = 35/435 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PA + + P+LSR EV E + A KA+ V + +R + L + + I +E +
Sbjct: 4 RNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEEL 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLS-------EGEKWLKPEYRSSGRSMIHKK 181
++ + + GK + S E+ T + L+ GE Y + R +
Sbjct: 64 AKLLTIEVGKPIKQ-SRVEVERTIR--LFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 182 AKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
P+GVVGAI +N+P H I P +A GN +V+K S N + +I
Sbjct: 121 R----EPIGVVGAITPFNFPANLFAHKI-APAIAV---GNSVVVKPSSNTPLTAIELAKI 172
Query: 238 IQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
++ A G P +++V+TG+ G+ +V++ V+ I F GS VG +I A T
Sbjct: 173 LEEA----GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKK 228
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
V LELGG D IV D D+ IAVR +++GQ C +R V ++Y F+ + +
Sbjct: 229 VALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVE 288
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 414
VK + G PL D+G L E E+++NLVNDA++KG +IL G + +
Sbjct: 289 KVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGG------KRDEGSF 342
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
FPPTV+ N M +M+EE FGP++PI K DEE V++AN + YGL +VF+ +RA
Sbjct: 343 FPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRAL 402
Query: 475 EIAAQIQCGVAAIND 489
++A +++ G IND
Sbjct: 403 KVARELEAGGVVIND 417
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 1e-78
Identities = 133/439 (30%), Positives = 215/439 (48%), Gaps = 41/439 (9%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
++P+T + A+VD V AR+A + W + S +R + L + + I EH +
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADE 61
Query: 128 ICEISSRDTGKTMVDASLGEIM----------TTCEKITWLLSEGEKW-LKPEYRSSGRS 176
+ + S DTGK + A ++ +K+ GE L P Y
Sbjct: 62 LARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKL-----HGETIPLGPGYFVY--- 112
Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
P GV G I+ WNYP + A+ +GN +V+K +E+A + R
Sbjct: 113 -------TVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTAL---R 162
Query: 237 IIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ + A A G P ++V+TG AE G ALV+ VD I F GS G +MR A++ +
Sbjct: 163 LAELAEEA-GLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVV 221
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
PVTLELGGK IV D D+ + V A +Q++GQ C+ R VHR IY + ++
Sbjct: 222 PVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLV 281
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAV 411
+ +++ GP L D+G L + ++++ V A +GA I+A G G + G
Sbjct: 282 ERFRALRVGPGLEDP-DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGY- 339
Query: 412 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471
+ PT++ +V +L QEE FGP++ +M F+ + E + LAN + YGL V++
Sbjct: 340 --FVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397
Query: 472 RAREIAAQIQCGVAAINDF 490
RA +A +++ G +N++
Sbjct: 398 RALRVARRLRAGQVFVNNY 416
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 1e-78
Identities = 124/452 (27%), Positives = 206/452 (45%), Gaps = 21/452 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I R P + PAT + +G P + A+VD VA AR+A W + S
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
+R LR L + + + + + + G + + + + + + +
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 169 EYRSS---GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E R G ++ ++ P+GVV AIV WN P + A+ +G +V+K S
Sbjct: 121 ERRPGSGGGHVLVRRE------PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSP 174
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283
++ A G P +V+V+ E GE LV VDK+ F GS GR
Sbjct: 175 ETPLDAY----LLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRR 230
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
I + L VTLELGGK A IV DD D+ V A+L ++GQ C R V R
Sbjct: 231 IAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRS 290
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
Y V +A V ++ G PL +G L E+++ + +GA ++ G
Sbjct: 291 RYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGR 350
Query: 404 -GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
L G + PT+ +V++ M++ QEE FGP++ ++ ++ +++ V++ANDS YGL
Sbjct: 351 PAGLDRG---WFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLS 407
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNY 494
+V++ R +A +I+ G +N F ++
Sbjct: 408 GSVWTADVERGLAVARRIRTGTVGVNGFRLDF 439
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 2e-77
Identities = 124/457 (27%), Positives = 206/457 (45%), Gaps = 36/457 (7%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
YI P + PAT + +G P + A+VD VA AR+A W+ +S ++R
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEER 60
Query: 111 RQFLRILLKYIIEHQELICEISSRDTG-------KTMVDASLGEIMTTCEKITWLLSEGE 163
L + + + + + + + G V +G + + +
Sbjct: 61 AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAAD-----ALKDF 115
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
++ + G S++ ++ P+GV G I WN+P + I + A+ +G +V+K
Sbjct: 116 EFEERR----GNSLVVRE------PIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKP 165
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGV 280
SE A S I+ L G P + +++ G GEAL + VD + F GS
Sbjct: 166 SEVAPLSA----IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRA 221
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G+ + A+ T+ V LELGGK A I+ DD D+ V A +SGQ+C R V
Sbjct: 222 GKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLV 281
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
R YA A ++ G P +G L +++Q + +++GA ++A
Sbjct: 282 PRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAG 341
Query: 401 GSFGH---LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457
G G L G + PTV +V M + +EE FGP++ I+ ++ ++E + +AND+
Sbjct: 342 GP-GRPEGLERGY---FVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDT 397
Query: 458 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 494
YGL V+S RAR +A +++ G IN A N
Sbjct: 398 PYGLAGYVWSADPERARAVARRLRAGQVHINGAAFNP 434
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 250 bits (642), Expect = 2e-77
Identities = 132/454 (29%), Positives = 205/454 (45%), Gaps = 52/454 (11%)
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILL 118
S PAT + + +VD V AR A + W K ++R + L L
Sbjct: 16 VSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLA 75
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKP 168
I ++ + + S D GK + +++ G++ + +KI
Sbjct: 76 DLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ------------ 123
Query: 169 EYRSSGRSMIHKKAKVEF---HPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIK 222
G+++ + + P+GV G I+ WN+P P LAA GN +V+K
Sbjct: 124 -----GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAA---GNTVVLK 175
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPG 279
+E S + +I+ A G P +V+++ GF T G A+ S VDKI F GS
Sbjct: 176 PAEQTPLSALYLAELIKEA----GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTA 231
Query: 280 VGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
VGR IM A+K+ L VTLELGGK IV DD D+ + A + GQ C R
Sbjct: 232 VGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI 291
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
+V IY FV + + G P G +K+ + + +GA +L
Sbjct: 292 FVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLL 351
Query: 399 ARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457
G H S+G YF PTV +V MK+ +EE FGP++ I+KF T++EV++ AND+
Sbjct: 352 TGGE-RHGSKG----YFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDT 406
Query: 458 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 491
YGL VF+ ++A ++ ++ G +N +
Sbjct: 407 EYGLAAGVFTKDINKALRVSRALKAGTVWVNTYN 440
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 9e-77
Identities = 134/435 (30%), Positives = 221/435 (50%), Gaps = 33/435 (7%)
Query: 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126
Y PAT + + P + RAE ++ +A A A W+K + +R + LR II ++E
Sbjct: 43 PVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKE 102
Query: 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAK 183
+ ++ + + GK + +A +GE+ + + E ++ + P R ++ K+
Sbjct: 103 DLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQ-- 159
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GVVGAI WN+P I + A+ +G +V+K SE + ALA
Sbjct: 160 ----PVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLT----------ALA 205
Query: 244 A------VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
A G P +++V+ G A E G+AL++S V KI F GS VG+ +M A+ T+
Sbjct: 206 AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKR 265
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
V+LELGG FIV DD D+ + A+ + ++SGQ C A R V IY F +K
Sbjct: 266 VSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSK 325
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 414
V+ + G G L +K+++ V DA+ KGA++L G S G +
Sbjct: 326 AVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK--RHSLGGT--F 381
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
+ PTV+ +V M + +EE FGP+ P+ +F T+EE + +AND+ GL +F+ RA
Sbjct: 382 YEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAW 441
Query: 475 EIAAQIQCGVAAIND 489
++ ++ G+ +N+
Sbjct: 442 RVSEALEYGIVGVNE 456
|
Length = 498 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 1e-76
Identities = 133/454 (29%), Positives = 212/454 (46%), Gaps = 34/454 (7%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQ 109
YI S PA + + P + + +A AR+A W ++
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 110 RRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS--LGEIMTTCEKITWLLSE--GEKW 165
R L + I E E + + + +TGKT+ ++ + ++ L ++ GE +
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIK 222
P H ++ P+GV G I WNYP P LAA GN +VIK
Sbjct: 121 DVPP---------HVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAA---GNTVVIK 168
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPG 279
SE + F +I G P +V+++TG T G L S VD + F G
Sbjct: 169 PSEVTPLTTIALFELI----EEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTA 224
Query: 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 339
GR IMR A+ + V LELGGK+ IV D D A+ ++GQ C+ R
Sbjct: 225 TGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLL 284
Query: 340 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
V I+ FV+ +A+ K + G L +MG L EH EK+ + + ++GA ++
Sbjct: 285 VEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVC 344
Query: 400 ---RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
R + L++G + PT+ +V+ TM+++QEE FGP++ + +F+T+EE ++LAND
Sbjct: 345 GGKRPTGDELAKGY---FVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLAND 401
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
+ YGL AV++ RA +A +++ G IND+
Sbjct: 402 TPYGLAGAVWTKDIARANRVARRLRAGTVWINDY 435
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 2e-76
Identities = 134/421 (31%), Positives = 206/421 (48%), Gaps = 15/421 (3%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + + S +VD VA AR A + W+ +R + L L + I+ + + +
Sbjct: 4 PATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELAR 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ S DTGK + A ++ + + +K G + + + P+G
Sbjct: 64 LESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE----PVG 119
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
VVGAIV WN+P + A+ +GN +V+K +E S RI + A G P
Sbjct: 120 VVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA---LRIAELM-AEAGFPAG 175
Query: 251 LVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
+++V+TGF E G ALV VDKI F GS VGR IM+ A+ L V+LELGGK A IV
Sbjct: 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIV 235
Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
D D+ + A + GQ C R VH IY F+ + + +S+ G PL
Sbjct: 236 FADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDP 295
Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
K MG L +++ + V+ ++GA +L G GA + PT+ V M
Sbjct: 296 KTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGK----RPGARGFFVEPTIFAAVPPEM 351
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
++ QEE FGP++ +M+F +EE +++AN + YGL V++ RA +AA ++ G I
Sbjct: 352 RIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWI 411
Query: 488 N 488
N
Sbjct: 412 N 412
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 3e-76
Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 24/447 (5%)
Query: 52 YIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
YI S PA + +G FP + ++VD V AR+A W K +R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
++L + + + +E + + +R+ GK + + G++ + + EG + L E
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRR-LFGET 119
Query: 171 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 230
S + +K A P+GVV I WN+P + A+ GN +V K +E+
Sbjct: 120 VPS--ELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPAC 177
Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALV--SSVDKIIFVGSPGVGRMIMRN 287
++++ A G P +V+V+ G E GEALV VD + F GS VG I
Sbjct: 178 A---LKLVEL-FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233
Query: 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERFYVHRD 343
++ V LE+GGK+ IV DD D+ +A+ AL S+ GQ C R VH
Sbjct: 234 CARPNKRVALEMGGKNPIIVMDDADL----DLALEGALWSAFGTTGQRCTATSRLIVHES 289
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+Y F+ + + K + G L + DMG L EK+ N ++GA +L G
Sbjct: 290 VYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGG-- 347
Query: 404 GHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461
L+ G ++ + PTV +V M++ QEE FGP++ +++ ++ EE +++AND+ YGL
Sbjct: 348 ERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGL 407
Query: 462 GCAVFSGSQHRAREIAAQIQCGVAAIN 488
A+++ ++A ++ G+ +N
Sbjct: 408 SSAIYTEDVNKAFRARRDLEAGITYVN 434
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 1e-75
Identities = 130/436 (29%), Positives = 202/436 (46%), Gaps = 40/436 (9%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+PAT + + P S A+VD VA A A W +++ +R + L L I E+ E +
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEEL 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIH 179
+ SR+TGK + E+ + + + GE Y SMI
Sbjct: 62 AALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGE------YLPGHTSMIR 115
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
++ P+GVV I WNYP P LAA GN +V+K SE +
Sbjct: 116 RE------PIGVVAQIAPWNYPLMMAAWKIAPALAA---GNTVVLKPSETTPLTT----- 161
Query: 237 IIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293
++ A LAA P +V+V+ G G+ALV+ V + GS G+ + R A+ TL
Sbjct: 162 LLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLK 221
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
V LELGGK IV DD D+ A ++GQ+C A R YVH +Y FV+ +
Sbjct: 222 RVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALV 281
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
+ V ++ G P +MG L E++ V + A +L G
Sbjct: 282 EAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGR----RAEGPGY 336
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
++ PTV+ V +++QEE FGP++ + F+ ++E ++LAND YGL +V++ RA
Sbjct: 337 FYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRA 396
Query: 474 REIAAQIQCGVAAIND 489
++A++ G +N
Sbjct: 397 MRLSARLDFGTVWVNT 412
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 2e-75
Identities = 136/452 (30%), Positives = 207/452 (45%), Gaps = 31/452 (6%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I P Y P K L P + +VD V A +A K W K+S +R
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPE 169
L + I E+ EL+ + D GK + + +I + + +
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQ------ 117
Query: 170 YRSSGRSMIHKKA-KVEFH-PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVS 224
S I + FH PLGVVG I+ WN+P P LAA GN +V+K +
Sbjct: 118 --EGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAA---GNTVVLKPA 172
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVG 281
S +I L P+ +V+V+TGF +E G+ L S + K+ F GS VG
Sbjct: 173 SQTPLSILVLMELIGDLL-----PKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVG 227
Query: 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAE 336
R+IM+ A++ L PVTLELGGK I DD A+ + G+ C
Sbjct: 228 RLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPS 287
Query: 337 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 396
R V IY F+ + + +++ G PL + MGA + EK+ + V+ ++GAE
Sbjct: 288 RALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAE 347
Query: 397 ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
+L G L ++ PT+I N+ M++ QEE FGP++ ++ F +EE + +AND
Sbjct: 348 VLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIAND 407
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
+ YGLG V++ +RA +A IQ G +N
Sbjct: 408 TEYGLGGGVWTRDINRALRVARGIQTGRVWVN 439
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 245 bits (629), Expect = 2e-75
Identities = 130/428 (30%), Positives = 204/428 (47%), Gaps = 22/428 (5%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAK-SSFKQRRQFLRILLKYIIEHQEL 127
Y P + +G PALS E+ E A A + W ++R L + E++E
Sbjct: 21 YSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH---KKAKV 184
+ + + GKT+ DA L E+ T + I + E ++ L + G K A+V
Sbjct: 81 VANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKR-LDGDS-LPGDWFPGTKGKIAQV 137
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
PLGVV AI +NYP + + ++ A+ GN +V K + G A
Sbjct: 138 RREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAE----AFHD 193
Query: 245 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
G P+ +V+V+TG E G+ LV+ +D I F GS VG + + + LELGG
Sbjct: 194 AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMK--RLVLELGG 251
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
KD IV D D+ A+ V+ AL SGQ C +R VH + V + + V +
Sbjct: 252 KDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKV 311
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G P D+ L + ++ ++ L++DA+ KGA +L G PT++
Sbjct: 312 GMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGG------GREGGNLIYPTLLD 365
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481
V M+L EE FGP++PI++ N EE ++LAN S YGL ++F+ ++AR++A ++
Sbjct: 366 PVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALE 425
Query: 482 CGVAAIND 489
G IN
Sbjct: 426 VGTVNINS 433
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 244 bits (625), Expect = 3e-75
Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 15/388 (3%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTG-KTMVDASLGEIMTTCEKITWLLSEGEK 164
S ++RR L L ++++Q+ + E S D G ++ + L EI+ + I +K
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
W+KP R G + KA+VE+ PLGVVG IV WNYP + P++AA+ +GN ++IK S
Sbjct: 78 WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGR 282
E + ++ E+ V V+TG A+ A SS+ D ++F GS VGR
Sbjct: 138 EFTPRTSALLAELLAEYF-----DEDEVAVVTGGADVAAA-FSSLPFDHLLFTGSTAVGR 191
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+MR A++ LTPVTLELGGK I+ D D+ A+ L ++GQ C + V
Sbjct: 192 HVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPE 251
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
D FV+ V + P LA D ++ H +LQ L+ DA KGA ++
Sbjct: 252 DKLEEFVAAAKAAVAKMY--PTLADNPDYTSIINERHYARLQGLLEDARAKGARVI---E 306
Query: 403 FGHLSEGAVD-QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461
E + PPT+++NV M++MQEE FGPI+PI+ +++ +E + N L
Sbjct: 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPL 366
Query: 462 GCAVFSGSQHRAREIAAQIQCGVAAIND 489
F + + + G IND
Sbjct: 367 ALYYFGEDKAEQDRVLRRTHSGGVTIND 394
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 243 bits (621), Expect = 2e-74
Identities = 124/423 (29%), Positives = 200/423 (47%), Gaps = 11/423 (2%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA + + A + +V+ +A AR+AQ WA S +R + LR I E E + +
Sbjct: 20 PANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGRILRRAADLIRERNEELAK 79
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + DTGKT+ + + ++ + + + L E G A PLG
Sbjct: 80 LETLDTGKTLQETIVADMDSGADVFEFFAGLAPA-LNGEIIPLG---GPSFAYTIREPLG 135
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
V I +WNYP + A+ +GN +V K SEN + I++ A G P+
Sbjct: 136 VCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEA----GLPKG 191
Query: 251 LVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
+ +V+ G AE G LV+ V K+ F G G+ IM A+ L VT+ELGGK IV
Sbjct: 192 VFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMELGGKSPLIV 251
Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
DD D+ A+ S+GQ C+ R +VH+ I F++++ + + + G P
Sbjct: 252 FDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDE 311
Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
+MG L H +K+ + + +GA + G + PTV + M
Sbjct: 312 ATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDM 371
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA +A Q++ G I
Sbjct: 372 TIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWI 431
Query: 488 NDF 490
N +
Sbjct: 432 NTY 434
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 3e-74
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 20/432 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + L PA S A+VD VA AR A W ++ +R + LR L + EH E +
Sbjct: 4 PATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELAL 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
I + D G + A LG++M + + L++E LK E G +H +
Sbjct: 64 IDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTE----LKGETIPVGGRNLHYTLR---E 115
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P GVV IV++N+P + A + +GN +V+K E A S + + L
Sbjct: 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVL----- 170
Query: 248 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
P + +++ G A G ALV V +I +GS GR IMR A++ + VTLELGGK+A
Sbjct: 171 PPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230
Query: 305 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
IV D D A AV GQ+C R +VH IY +++V + V ++ G
Sbjct: 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD 290
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 423
P MG L + +++ + ++ A +GA ++ G Y PTV +V
Sbjct: 291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADV 350
Query: 424 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 483
M++ +EE FGP++ ++++ + E+V AN YGL A+++ +A A +++ G
Sbjct: 351 TPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAG 410
Query: 484 VAAINDFASNYM 495
IN + +++
Sbjct: 411 YVWINGSSRHFL 422
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 4e-74
Identities = 137/432 (31%), Positives = 215/432 (49%), Gaps = 32/432 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT +G PA + +VD V AR+A W K++ +R ++LR + + + E +E + E
Sbjct: 4 PATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAE 63
Query: 131 ISSRDTGKTMVDAS--LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK----KAKV 184
+ +RD GK + +A+ + ++ E L+E + R++ KA+V
Sbjct: 64 LEARDNGKPLDEAAWDVDDVAGCFEYYA-DLAEQLD------AKAERAVPLPSEDFKARV 116
Query: 185 EFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+GVVG I WN+P P LAA G +V+K SE S + I
Sbjct: 117 RREPVGVVGLITPWNFPLLMAAWKVAPALAA---GCTVVLKPSELTSLTELELAEIA--- 170
Query: 242 LAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A G P +++V+TG E G L + +DKI F GS G +M+ A++ + PV+LE
Sbjct: 171 -AEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLE 229
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ + A+ ++GQ C+ R VH I F+ ++A ++
Sbjct: 230 LGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEA 289
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF-P 416
+ G PL +G L EK+ + + ++GA +L G HL +G YF
Sbjct: 290 IRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKG----YFIA 345
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV +V ++ +EE FGP++ + F T++E + LANDS YGL AV S R +
Sbjct: 346 PTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRV 405
Query: 477 AAQIQCGVAAIN 488
A ++ G+ IN
Sbjct: 406 AEALEAGIVWIN 417
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 5e-74
Identities = 143/433 (33%), Positives = 227/433 (52%), Gaps = 26/433 (6%)
Query: 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
+ Y PA + L + A+VD V A++A K W K++ +R L + I E++
Sbjct: 18 IDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENK 77
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPEYRSSGRSMIHKKAK 183
EL+ + + D GK + + +I + + E+ S++ ++
Sbjct: 78 ELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLRE-- 135
Query: 184 VEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
P+GVVG I+ WN+PF P LAA GN +VIK S S S +IIQ
Sbjct: 136 ----PIGVVGQIIPWNFPFLMAAWKLAPALAA---GNTVVIKPSSTTSLSLLELAKIIQD 188
Query: 241 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
L P+ +V+++TG +++GE L++ +DK+ F GS VGR + A+K L P TL
Sbjct: 189 VL-----PKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATL 243
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGK A I+ DD + + A L + GQ C R +V IY FV+++ + +
Sbjct: 244 ELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFE 303
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YF 415
+V G PL MGA + +K+ + V+ A ++GA+IL G L+E +D+ +
Sbjct: 304 NVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG--HRLTENGLDKGFFI 361
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PT+IVNV + M++ QEE FGP+ ++KF T++EV+ +ANDS YGLG VF+ +RA
Sbjct: 362 EPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALR 421
Query: 476 IAAQIQCGVAAIN 488
+A ++ G +N
Sbjct: 422 VARAVETGRVWVN 434
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 5e-73
Identities = 125/431 (29%), Positives = 194/431 (45%), Gaps = 32/431 (7%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PA SR + + +A A A WA ++ +R + L + + + +
Sbjct: 4 LNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDL 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGR----SMIHKK 181
++ + G T A E T E LL ++ E S SM +
Sbjct: 64 IDLLIDEGGSTYGKA-WFETTFTPE----LLRAAAGECRRVRGETLPSDSPGTVSMSVR- 117
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
PLGVV I +NYP + A+ +GN +V+K SE G I++ A
Sbjct: 118 -----RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA 172
Query: 242 LAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
G P+ + +V+TG AE G+ LV V + F GS VGR I A + L +TLE
Sbjct: 173 ----GLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLE 228
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK+ IV D D+ + + A A GQ C A R V +Y FV +
Sbjct: 229 LGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASK 288
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G P +G L E+++ V DA+ KGA++L G +G ++ PT
Sbjct: 289 LKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK----YDGN---FYQPT 341
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V+ +V M++ +EE FGP+ ++ EE ++LAND+ YGL A+ + RA ++A
Sbjct: 342 VLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAE 401
Query: 479 QIQCGVAAIND 489
+++ G+ IND
Sbjct: 402 RLESGMVHIND 412
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 7e-73
Identities = 136/419 (32%), Positives = 202/419 (48%), Gaps = 44/419 (10%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM------ 140
+ D+ V A A W+K+ +RR L + ++ E +TG T
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
VD + G + IT ++ P + +M+ K+ P+GVV I WN
Sbjct: 61 VDLAAGMLREAASLITQIIGG----SIPSDKPGTLAMVVKE------PVGVVLGIAPWNA 110
Query: 201 PFH----NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
P I P LAA GN +V+K SE + + I + A G P+ +++V+T
Sbjct: 111 PVILGTRAIAYP-LAA---GNTVVLKASELSP--RTHWL-IGRVFHEA-GLPKGVLNVVT 162
Query: 257 GFAETG----EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310
E EAL++ V K+ F GS VGR+I A+K L PV LELGGK IV +D
Sbjct: 163 HSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK-Y 369
D+ A A+ A +SGQ C ER VH I FV ++ + + AGP + G
Sbjct: 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLV 282
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
A +++++ LV+DAL KGA+++ G G E PPT++ NV M +
Sbjct: 283 SAAA------ADRVKELVDDALSKGAKLVV-G--GLADESPSGTSMPPTILDNVTPDMDI 333
Query: 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
EE+FGP++ I++ +EE V++ANDS YGL AVF+ RA +A +I+ G IN
Sbjct: 334 YSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN 392
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 2e-72
Identities = 129/413 (31%), Positives = 198/413 (47%), Gaps = 27/413 (6%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
A+VD A+A AQ+ WA + ++R LR + EH + I + R++G A
Sbjct: 11 DAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA 70
Query: 144 --SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
+G + + L ++ + + P + GR + ++ PLGVVG I +N+P
Sbjct: 71 GFEVGAAIGELHEAAGLPTQPQGEILPS--APGRLSLARRV-----PLGVVGVISPFNFP 123
Query: 202 FH---NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
P LA GN +V+K SG +I G P ++ V+ G
Sbjct: 124 LILAMRSVAPALAL---GNAVVLKPDPRTPVSGGV---VIARLFEEAGLPAGVLHVLPGG 177
Query: 259 AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 316
A+ GEALV V I F GS VGR + A + L V+LELGGK+A IV DD D+
Sbjct: 178 ADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLA 237
Query: 317 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 376
A A GQ C A R VH + + +++A K + G P G+ +G L
Sbjct: 238 ASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLIN 297
Query: 377 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436
+++ +V+D++ GA + A G++ +G ++ PTV+ V M EE FG
Sbjct: 298 ARQLDRVHAIVDDSVAAGARLEAGGTY----DG---LFYRPTVLSGVKPGMPAFDEEIFG 350
Query: 437 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
P+ P+ F++DEE V LAND+ YGL + S RA +A +++ G+ IND
Sbjct: 351 PVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIND 403
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 5e-72
Identities = 126/409 (30%), Positives = 202/409 (49%), Gaps = 13/409 (3%)
Query: 90 ERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
RV A++A S+ +R L+ L K I+ +E I + D K + L EI
Sbjct: 1 RRVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEI 60
Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
+ +I + +KW+KP+ + + K+K+ + P GV I WNYPF+ F P
Sbjct: 61 LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120
Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 267
+++A+ +GN ++K SE + +II+ A E+ V V G AE +AL+
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREAF-----DEDEVAVFEGDAEVAQALLEL 175
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
D I F GSP VG+++M A+K L VTLELGGK IV + D+ A+ +
Sbjct: 176 PFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235
Query: 328 SGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
+GQ C + +VH + FV + A+I K D+ + H ++L+ L
Sbjct: 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGL 295
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446
++DA+ KGA++ G F A +Y PTV+ NV MK+MQEE FGP++PI+ +
Sbjct: 296 LDDAVAKGAKVEFGGQF-----DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350
Query: 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 495
+EV++ N L VFS + ++ A+ G +ND +++
Sbjct: 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFL 399
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 7e-72
Identities = 138/436 (31%), Positives = 214/436 (49%), Gaps = 19/436 (4%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
R SE + P T + L PA S+ +VDE A AQK WA + ++R + L
Sbjct: 4 RDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKA 63
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM 177
+ + E ++ I E R++G T + A++ E + L+ E R +
Sbjct: 64 AQILEERRDEIVEWLIRESGSTRIKANI-EWGAA---MAITREAATFPLRMEGRILPSDV 119
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-R 236
K+ +V PLGVVG I WN+P H + A+ GN +V+K + + +G +
Sbjct: 120 PGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAK 179
Query: 237 IIQAALAAVGAPENLVDVITG-FAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLT 293
I + A G P+ +++V+ G +E G+A V V ++I F GS VGR I A + L
Sbjct: 180 IFEEA----GLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLK 235
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
V LELGG + F+V +D D+ AV GQ C R VH D+Y FV +
Sbjct: 236 KVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFV 295
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
+ VK++ G P +G L + L + + A+++GA +L G A
Sbjct: 296 ERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGN 348
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
PTV+ +V + M++ +EE FGP+ PI+K + +EE ++LAND+ YGL AVF+ R
Sbjct: 349 VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERG 408
Query: 474 REIAAQIQCGVAAIND 489
+ A +I G+ IND
Sbjct: 409 VQFARRIDAGMTHIND 424
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 1e-70
Identities = 143/432 (33%), Positives = 218/432 (50%), Gaps = 27/432 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
PAT + +G PA + +VD V ARKA K WA+++ R ++LR + I E +
Sbjct: 30 PATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERK 89
Query: 126 ELICEISSRDTGKTMVDASLGEI--MTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKK 181
+ ++ + D GK +D + ++ + C + L+E + + S M K
Sbjct: 90 SELAKLETLDCGKP-LDEAAWDMDDVAGCFEYYADLAEALD----AKQKAPVSLPMETFK 144
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
V PLGVVG I WNYP + A+ +G V+K SE AS + C A
Sbjct: 145 GYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVT-CLEL----AD 199
Query: 242 LAA-VGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
+ VG P +++V+TG E G L S VDKI F GS GR IM A++ + PV+L
Sbjct: 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSL 259
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGK IV DDVD+ + A+ ++GQ C+ R VH I + F+ ++ K K
Sbjct: 260 ELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAK 319
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFP 416
++ PL +G + EK+ ++ A +GA IL G HL +G +
Sbjct: 320 NIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGF---FIE 376
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT+I +V +M++ +EE FGP++ + F+T++E ++LANDS YGL AV S R +
Sbjct: 377 PTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERV 436
Query: 477 AAQIQCGVAAIN 488
+ Q G+ IN
Sbjct: 437 SEAFQAGIVWIN 448
|
Length = 503 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 2e-70
Identities = 135/436 (30%), Positives = 209/436 (47%), Gaps = 38/436 (8%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
PAT + +G P A+VD VA A+ A WA + ++R + L + + E +
Sbjct: 3 NPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELA 62
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEF 186
+ + +TG + + E + + L E LK E G ++ +
Sbjct: 63 RLLALETGNALRTQARPEAAVLADLFRYFGGLAGE----LKGETLPFGPDVLTYTVRE-- 116
Query: 187 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
PLGVVGAI+ WN P + A+ +GN +V+K +E+A + I+ L
Sbjct: 117 -PLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVL---- 171
Query: 247 APENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303
P +++VITG+ E G ALV VDK+ F GS VG++I R A+ L PV+LELGGK
Sbjct: 172 -PAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKS 230
Query: 304 AFIVCDDVDVPHVAQIAV---RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
IV D D+ A+ R Q GQ+C R +VH DIY F+ ++ + +
Sbjct: 231 PMIVFPDADLDDAVDGAIAGMRFTRQ--GQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLK 288
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-----KGAEILARGSF---GHLSEGAVD 412
G PL D+GA+ SEK V +D GA +L G G L++G
Sbjct: 289 IGDPLDEATDIGAII----SEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGF-- 342
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
+ PT+ V++ +L +EE FGP++ + + ++EV+ +ANDS YGL V++ R
Sbjct: 343 -FVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGR 401
Query: 473 AREIAAQIQCGVAAIN 488
A A ++ G +N
Sbjct: 402 ALRAAHALEAGWVQVN 417
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 3e-70
Identities = 128/450 (28%), Positives = 204/450 (45%), Gaps = 52/450 (11%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
K Y PAT + L S A+VD VA A A W++++ K+R + L L I
Sbjct: 15 EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAI 74
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRS 172
E+ + + S + GK + A EI + + + GE Y
Sbjct: 75 EENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGE------YLE 128
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSEN 226
SMI + P+GVV +I WNYP M+A A+ +GN +V+K SE
Sbjct: 129 GHTSMIRRD------PVGVVASIAPWNYPL------MMAAWKLAPALAAGNTVVLKPSEI 176
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRM 283
+ A LAA P +++V+TG A G+ALV V + GS G+
Sbjct: 177 TPLT-ALKL----AELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKH 231
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
++ A+ ++ LELGGK IV DD D+ V + ++GQ+C A R Y R
Sbjct: 232 VLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS 402
IY V+++A V ++ G P ++G L H +++ V A G ++ G
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE 351
Query: 403 FGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
A D Y+ PT++ +++Q E FGP++ + F+ +++ V+ ANDS Y
Sbjct: 352 -------APDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
GL +V++ RA ++A++Q G +N
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCTWVNT 434
|
Length = 475 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 4e-70
Identities = 119/454 (26%), Positives = 197/454 (43%), Gaps = 50/454 (11%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
PA + + S +V+ VA AR+A K W K +R + +R +
Sbjct: 8 VGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIG 67
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGR 175
+ + + +E + + S + GK + + LGE+ + C+ L R
Sbjct: 68 EALRKKKEALGRLVSLEMGKILPEG-LGEVQEMIDICDYAVGL---------------SR 111
Query: 176 SM----IH-----KKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVS 224
+ I + +++PLGVVG I ++N+P + N +A V GN +V K S
Sbjct: 112 MLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPV-AVPGWNAAIALV-CGNTVVWKPS 169
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGR 282
E + +I+ L G P +V+++TG + GE LV V + F GS VGR
Sbjct: 170 ETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGR 229
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERF 338
+ ++ V LELGG +A IV DD D+ +AVRA L ++ GQ C R
Sbjct: 230 RVGETVARRFGRVLLELGGNNAIIVMDDADL----DLAVRAVLFAAVGTAGQRCTTTRRL 285
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
VH +Y F+ ++ K K V G PL +G L ++ +A++
Sbjct: 286 IVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPL----INQAAVEKYLNAIEIAKSQG 341
Query: 399 ARGSFG-HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
G +G + PT++ V +++QEE F PI+ ++KF++ EE + + ND
Sbjct: 342 GTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINND 401
Query: 457 SRYGLGCAVFSGSQHRAREI--AAQIQCGVAAIN 488
GL ++F+ A CG+ +N
Sbjct: 402 VPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVN 435
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 3e-69
Identities = 136/429 (31%), Positives = 219/429 (51%), Gaps = 24/429 (5%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
Y PAT + +G P E + + A +A K W ++ K+R LR ++E+++ +
Sbjct: 2 YNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDL 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKV 184
+ + + GK + +A GEI+ + W E + R G ++ K+ V
Sbjct: 62 ARLITLENGKPLKEAK-GEILYAASFLEWFAEEAK-------RVYGDTIPSPQSDKRLIV 113
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
P+GV AI WN+P I AA+ +G +V+K +E S R+ + A
Sbjct: 114 IKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA--- 170
Query: 245 VGAPENLVDVITGFA--ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
G P+ +++VITG E G L +S V KI F GS VG+++M+ ++ T+ V++ELG
Sbjct: 171 -GIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELG 229
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
G FIV DD D+ + A+ + +++GQ C A R YVH IY F ++A+ VK +
Sbjct: 230 GNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLK 289
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
G L G L + EK++ + DA++KGA+++ G H G +F PTV+
Sbjct: 290 VGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR-HELGG---NFFEPTVL 345
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
NV M + +EE FGP+ P+ KF+ +EEV+ +AND+ GL FS R +A +
Sbjct: 346 SNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEAL 405
Query: 481 QCGVAAIND 489
+ G+ IN
Sbjct: 406 EYGMVGINT 414
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 3e-68
Identities = 131/439 (29%), Positives = 208/439 (47%), Gaps = 37/439 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
P + +G P S +V++ +A A++ K +R + L + + E +E
Sbjct: 4 ISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEF 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE------YRSSGRSMIHKKA 182
+ + GK + DA E+ E + L +E K L E +
Sbjct: 64 ARTIALEAGKPIKDA-RKEVDRAIETLR-LSAEEAKRLAGETIPFDASPGGEGRIGFTIR 121
Query: 183 KVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ P+GVV AI +N+P H + P +AA GN +V+K + S ++
Sbjct: 122 E----PIGVVAAITPFNFPLNLVAHKV-GPAIAA---GNAVVLKPASQTPLSALKLAELL 173
Query: 239 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
A G P+ ++V+TG ET G+ALV+ V I F GSP VG I R A L V
Sbjct: 174 LEA----GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKV 227
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
TLELG A IV D D+ + V A ++GQ C +R +VH DIY F+ +
Sbjct: 228 TLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAA 287
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
K + G PL D+G + +E+++ V +A++ GA +L G +GA+
Sbjct: 288 TKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT----GGKRDGAI---L 340
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PTV+ +V MK++ EE F P++ + F+T +E + +ANDS YGL VF+ +A +
Sbjct: 341 EPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALK 400
Query: 476 IAAQIQCGVAAINDFASNY 494
A +++ G IND +S +
Sbjct: 401 AARELEVGGVMIND-SSTF 418
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 3e-68
Identities = 130/438 (29%), Positives = 201/438 (45%), Gaps = 29/438 (6%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126
+PAT + +G + AE + +A AR+A WA + R + L L + E
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAE 60
Query: 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKV 184
+ + + + GK + +A EI ++ + L+ E E S++ ++
Sbjct: 61 RLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLRE--- 116
Query: 185 EFHPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+GV G IV WN P P LAA G +V+K A + II+
Sbjct: 117 ---PMGVAGIIVPWNSPVVLLVRSLAPALAA---GCTVVVKP---AGQTAQINAAIIRIL 167
Query: 242 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
P +V++ T +E LV+S VD I F GS GR IM A+ TL + LE
Sbjct: 168 AEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLE 227
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ RA +GQ C R V R I ++A + +
Sbjct: 228 LGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAA 287
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG--SFGHLSEGAVDQYFP 416
V GP L DMG L + +++ +V A+ GAE++ RG L++GA +
Sbjct: 288 VKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGA---FLR 344
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT++ + ++QEE FGP++ + F+ + E V LAND+ YGL +V++ RA +
Sbjct: 345 PTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRV 404
Query: 477 AAQIQCGVAAINDFASNY 494
A I+ G IND+ +
Sbjct: 405 ARAIRAGTVWINDWNKLF 422
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 2e-67
Identities = 122/432 (28%), Positives = 196/432 (45%), Gaps = 25/432 (5%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125
PAT + + +A+VD+ V AR A K W +R + L L I +
Sbjct: 27 INPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDR 86
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
+ + + D GK + L ++ + + + +K G + + +
Sbjct: 87 AYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHE-- 144
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV G I+ WN+P P LA GN +V+K +E + + +I+ A
Sbjct: 145 --PVGVCGQIIPWNFPLLMAAWKLAPALAC---GNTVVLKPAEQTPLTALYLASLIKEA- 198
Query: 243 AAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLE 298
G P +V+V+ G+ T A +SS +DK+ F GS VG++I + A K+ L VTLE
Sbjct: 199 ---GFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLE 255
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV D D+ + + A A + GQ C R +V IY FV + + K
Sbjct: 256 LGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKK 315
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
G P K + G E +K+ L+ +GA++ G G + PT
Sbjct: 316 RVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGK----RHGDKGYFIQPT 371
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V +V M++ +EE FGP+ I KF T +EV++ AN++ YGL AVF+ +A +
Sbjct: 372 VFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSN 431
Query: 479 QIQCGVAAINDF 490
++ G +N +
Sbjct: 432 ALRAGTVWVNCY 443
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 5e-67
Identities = 132/434 (30%), Positives = 211/434 (48%), Gaps = 38/434 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQEL 127
PAT + L A + A+V+ VA A++ QK+WA + +R RIL + + E +
Sbjct: 29 PATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERS---RILRRAVDILRERNDE 85
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKA 182
+ + + DTGK + + S+ +I+T + + + EGE + G S ++ +
Sbjct: 86 LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGE-----QIPLRGGSFVYTRR 140
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIF----NPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ PLGV I +WNYP I P LAA GN ++ K SE + I
Sbjct: 141 E----PLGVCAGIGAWNYPIQ-IACWKSAPALAA---GNAMIFKPSEVTPLTALKLAEIY 192
Query: 239 QAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
A G P+ + +V+ G G L + K+ F G G+ +M A+ +L VT
Sbjct: 193 TEA----GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVT 248
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
+ELGGK IV DD D+ A IA+ A SSGQ C R +V + I A F +++ + V
Sbjct: 249 MELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERV 308
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--Y 414
+ + G P+ + G L H +K+ + +GA +L G L+EG +
Sbjct: 309 ERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGG--ERLTEGGFANGAF 366
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
PTV + M +++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA
Sbjct: 367 VAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAH 426
Query: 475 EIAAQIQCGVAAIN 488
+ Q++ G+ IN
Sbjct: 427 RVIHQLEAGICWIN 440
|
Length = 488 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 8e-67
Identities = 120/402 (29%), Positives = 187/402 (46%), Gaps = 17/402 (4%)
Query: 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
E VA+ R+ S + R+ L+ L + + E++E I D GK +A L EI
Sbjct: 1 AELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEI 60
Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
+I L +KW+KP S + KA V PLGVV I WNYP P
Sbjct: 61 AVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAP 120
Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 267
++ A+ +GN +V+K SE A + ++I V V+ G E AL++
Sbjct: 121 LIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF-----DPEAVAVVEGGVEVATALLAE 175
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
D I F GSP VG+++M A+K LTPVTLELGGK IV D ++ A+ +
Sbjct: 176 PFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
+GQ C + VH I + ++ K +K P D G + H ++L +L+
Sbjct: 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESP-DYGRIINERHFDRLASLL 294
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
+D +++ G ++Y PT++ +V+ LMQEE FGPI+PI+ ++
Sbjct: 295 DD-----GKVVIGGQV-----DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDL 344
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
+E ++ N L +FS + + A+ G +ND
Sbjct: 345 DEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVND 386
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 2e-64
Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 41/433 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQEL 127
P T + +G PA + + E +A A + S R Q IL K + +E
Sbjct: 6 PYTGEVVGTVPAGTEEALREALALAA------SYRSTLTRYQRSAILNKAAALLEARREE 59
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-----IHKKA 182
+ + ++G + D E+ + + + +E R G S + KA
Sbjct: 60 FARLITLESGLCLKDT-RYEVGRAADVLRFAAAEAL-------RDDGESFSCDLTANGKA 111
Query: 183 KVEF---HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
+ F PLGVV AI +N+P + + + + A+ + N IV+K SE S Y +
Sbjct: 112 RKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS-AIYLADL- 169
Query: 240 AALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
L G P +++ V+TG E G+ L++ VD + F G VG+ I A+
Sbjct: 170 --LYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA--ATAGYKRQL 225
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
LELGG D IV DD D+ A +AV + +SGQ C +R VH + FV + +
Sbjct: 226 LELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKS 285
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
++ G P+ DMG + E + +++N V +A+ +GA +L G+ +GA+ +
Sbjct: 286 AALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVL----LGNQRQGAL---YA 338
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV+ +V +L+ EE FGP+ P+++ +E + ++N + YGL V + + +
Sbjct: 339 PTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRL 398
Query: 477 AAQIQCGVAAIND 489
++ G +N+
Sbjct: 399 VERLDVGTVNVNE 411
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 2e-64
Identities = 122/388 (31%), Positives = 193/388 (49%), Gaps = 34/388 (8%)
Query: 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKP 168
LR + I E I + + GK A + E+ T + I ++ EGE +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE--IIQ 57
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
R ++ K+ LGV I+ WN+PF I M A+ +GN IVIK SE
Sbjct: 58 SDRPGENILLFKR------ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTP 111
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIM 285
+ F I + +G P+ + +++ G ET G+ L + V + GS G IM
Sbjct: 112 -NNAIAFAKI---VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 167
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVH 341
A+K +T V LELGGK IV DD D+ +AV+A + S SGQ C AER YV
Sbjct: 168 AAAAKNITKVCLELGGKAPAIVMDDADLD----LAVKAIVDSRVINSGQVCNCAERVYVQ 223
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
+ IY FV+++ + +++V G P MG L E+++ V A+++GA +
Sbjct: 224 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALG 283
Query: 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460
G + Y+PPT++++V M +M EE FGP++P++ F+T EE + +ANDS YG
Sbjct: 284 GK----AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYG 339
Query: 461 LGCAVFSGSQHRAREIAAQIQCGVAAIN 488
L ++++ + + A + ++ G IN
Sbjct: 340 LTSSIYTQNLNVAMKAIKGLKFGETYIN 367
|
Length = 409 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 4e-64
Identities = 119/436 (27%), Positives = 204/436 (46%), Gaps = 29/436 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + +G PA RA+ +E +A AR + +R L + + E +
Sbjct: 6 PYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAK 65
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
I + + GK + DA E+ + + E GE+ + S + +
Sbjct: 66 IIACEGGKPIKDA-RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE-- 122
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
P+GVV AI +N+P + + + + A+ +G +V+K + S +I+ A
Sbjct: 123 --PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA---- 176
Query: 246 GAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302
G PE ++ V+TG G+A + V + F GS VG + NA + LELGG
Sbjct: 177 GVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGK--RIALELGGN 234
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
IV D D+ + + +GQ C +R YVH ++Y F+ VK + G
Sbjct: 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVG 294
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
PL D+G L E +E+++ V +A++ GA +L G +GA+ F PTV+ +
Sbjct: 295 DPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE----RDGAL---FKPTVLED 347
Query: 423 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 482
V KL EE FGP++PI++++ EE +++AN + YGL +F+ + A + A +++
Sbjct: 348 VPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEV 407
Query: 483 GVAAIND---FASNYM 495
G +ND F +++M
Sbjct: 408 GGVMVNDSSAFRTDWM 423
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 6e-64
Identities = 131/416 (31%), Positives = 204/416 (49%), Gaps = 28/416 (6%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTM 140
+VD V ARKA + W + + +R RILL++ + +H + + + + D GK
Sbjct: 41 EDVDRAVKAARKAFDEGPWPRMTGYERS---RILLRFADLLEKHADELAALETWDNGKPY 97
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGVVGAIVSWN 199
A E+ + +K + G ++ H P+GVVG I+ WN
Sbjct: 98 EQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYT-----LHEPIGVVGQIIPWN 152
Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVITGF 258
+P + A+ GN IV+K +E S A LAA G P+ +++++TGF
Sbjct: 153 FPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLA-----AKLAAEAGLPDGVLNIVTGF 207
Query: 259 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 314
T A ++S VDK+ F GS VG++IM+ A+K+ L PVTLELGGK FIVC+D DV
Sbjct: 208 GPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD 267
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 374
++A A + GQ C R +VH IY FV + G P + G
Sbjct: 268 KAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQ 327
Query: 375 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434
E EK+ + + ++GA ++ G G+ Y PT+ +V MK+ ++E
Sbjct: 328 VDKEQFEKILSYIEHGKEEGATLITGGD----RIGSKGYYIQPTIFSDVKDDMKIARDEI 383
Query: 435 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
FGP+ I+KF T +EV+K AN+S+YGL VFS + A ++ ++ G +N +
Sbjct: 384 FGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCY 439
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 3e-63
Identities = 130/432 (30%), Positives = 202/432 (46%), Gaps = 20/432 (4%)
Query: 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKS-SFKQRRQFLRILLKYI 121
V+ Y P+T K + + A+VD V A A + W S +R + L L +
Sbjct: 22 GTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLM 81
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ + + I + D GKT A ++ + + + W + + I K
Sbjct: 82 ERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGG----WADKIHGQVIETDIKKL 137
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+GV G I+ WN+P + A+ +GN IV+K SE S + ++I A
Sbjct: 138 TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA 197
Query: 242 LAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTL 297
G P +++V++G+ T +SS +DK+ F GS VGR +M A+K+ L VTL
Sbjct: 198 ----GFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTL 253
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGK IV DD D+ + GQ C R YV IY FV + + K
Sbjct: 254 ELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 416
+ G P A G E++ + + +GA + G H +EG YF
Sbjct: 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGAT-VETGGKRHGNEG----YFIE 368
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT+ +V MK+++EE FGP++ ++KF T+EE +K ANDS YGL AVF+ + + A +
Sbjct: 369 PTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRV 428
Query: 477 AAQIQCGVAAIN 488
A ++ G +N
Sbjct: 429 ANALKAGTVWVN 440
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 4e-63
Identities = 128/446 (28%), Positives = 206/446 (46%), Gaps = 38/446 (8%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I + P++ PAT + L +VD VA AR A + W+ R
Sbjct: 25 FINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRA 84
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
+ L + ++I +HQ L + S D GK + ++ +I Y
Sbjct: 85 RHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHF--------------YH 130
Query: 172 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENAS 228
+G + + + P+GVVG IV WN+P + P LA GN +V+K +E
Sbjct: 131 HAGWAQLLDTELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAM---GNTVVLKPAEYTP 187
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286
+ + I A G P +++++TG G AL + VDK+ F GS VGR + R
Sbjct: 188 LTALLFAEICAEA----GLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRR 243
Query: 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
+ T ++LELGGK FIV DD D+ + V A + GQ C R V +
Sbjct: 244 ATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAE 303
Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG----S 402
+ ++ + + + G PL DMGA+ ++++ LV + +GA++ G S
Sbjct: 304 ELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPS 363
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
G ++PPT+ NV ++ QEE FGP++ ++ F T +E V LAN++ YGL
Sbjct: 364 KGP--------FYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLA 415
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIN 488
+V+S + A E+A ++ GV IN
Sbjct: 416 ASVWSENLSLALEVALSLKAGVVWIN 441
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 2e-62
Identities = 117/423 (27%), Positives = 193/423 (45%), Gaps = 29/423 (6%)
Query: 77 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136
+G + S + D +A A A W ++S + R L + +E + + +R+
Sbjct: 28 VGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREE 87
Query: 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM--IHKKAKVEFH--PLGVV 192
GKT+ +A GE+ + + E R SG ++ +VE PLGVV
Sbjct: 88 GKTLPEA-RGEVTRAGQIFRYYAGEA-------LRLSGETLPSTRPGVEVETTREPLGVV 139
Query: 193 GAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
G I WN+P I P LA GN +V K +E S + +++ L G P
Sbjct: 140 GLITPWNFPI-AIPAWKIAPALAY---GNTVVFKPAELTPASA---WALVEI-LEEAGLP 191
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
+ +++ G +E G+ALV VD + F GS VGR I A+ V LE+GGK+
Sbjct: 192 AGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPL 251
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
+V DD D+ + AV+ A S+GQ C + R V I+ FV + + K++ G L
Sbjct: 252 VVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDAL 311
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
D+G + EK + A +GA+++ G L Y P + V +
Sbjct: 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGG--ERLKRPDEGYYLAPALFAGVTN 369
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
M++ +EE FGP+ +++ +E + +AND+ +GL + + S A +++ GV
Sbjct: 370 DMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVV 429
Query: 486 AIN 488
+N
Sbjct: 430 MVN 432
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 5e-62
Identities = 132/451 (29%), Positives = 216/451 (47%), Gaps = 31/451 (6%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQR 110
+I R QSE ++ PAT + + + + A+VD VA A +A WAK++ +R
Sbjct: 3 FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAER 62
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--------EG 162
+ L L I +H E + ++ + +GK++ L + +L G
Sbjct: 63 GRILLRLADLIEQHGEELAQLETLCSGKSI---HLSRAFEVGQSANFLRYFAGWATKING 119
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222
E L P S A P+GVV IV WN+ + AA+ +G IVIK
Sbjct: 120 ET-LAPSIPSMQGE--RYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIK 176
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGV 280
SE + R+ + A A G P+ +++V+ G G L+S V K+ F GS
Sbjct: 177 PSEFTPLT---LLRVAELAKEA-GIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVAT 232
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G+ I R A+ LT VTLELGGK+A D D+ V + + A GQ CA ERFYV
Sbjct: 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYV 292
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
HR + V+++ + + S G P+ G L H +K+ + ++DA +G EI+
Sbjct: 293 HRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRG 352
Query: 401 GSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457
G A+ + PT+++ + +LM+EE FGP++ + + +EE+++L ND+
Sbjct: 353 G-------EALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDT 405
Query: 458 RYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
+GL +V++ + +A +I+ G +N
Sbjct: 406 PFGLTASVWTNNLSKALRYIPRIEAGTVWVN 436
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 3e-60
Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 18/414 (4%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
E+D ++ R + + R L+ L + +++E I E +D G+ + L
Sbjct: 5 DEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLL 64
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSG--RSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
E+ I +L +KW K E G M K ++ PLGVV I WNYP
Sbjct: 65 TEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGK-PRIRKEPLGVVLIIGPWNYPVL 123
Query: 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETG 262
+P++ A+ +G +V+K SE + ++ L + V+ G ET
Sbjct: 124 LALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYL-----DPDAFQVVQGGVPETT 178
Query: 263 EALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
L DKI + GS VGR+I A+K LTPVTLELGGK IV + D+ A+ +
Sbjct: 179 ALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238
Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382
++GQ C + V +Y FV ++ K++ G A D + H +
Sbjct: 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASP-DYTRIVNPRHFNR 297
Query: 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442
L++L++ KG +++ G ++ PPT++ +V+ LM EE FGP++PI+
Sbjct: 298 LKSLLDTT--KG-KVVIGGEM-----DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPII 349
Query: 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 496
K + +E +K+ N L +F+ + I + + G IND +
Sbjct: 350 KVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGV 403
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 1e-59
Identities = 126/429 (29%), Positives = 204/429 (47%), Gaps = 16/429 (3%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PA + + + +VD VA ARKA + W + S +R L + I +E +
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
I + ++GK + + GEI + + S Y + G M+ V P
Sbjct: 64 ALIETLESGKP-ISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDML---GLVLREP 119
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
+GVVG I WN+PF + + A+ +G +V+K SE S + + + + A G P
Sbjct: 120 IGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTT---LMLAELLIEA-GLP 175
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
+V+++TG+ A G+A+ VD + F GS VG+ I A++ L V+LELGGK+
Sbjct: 176 AGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQ 235
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV D D+ A V ++G+ C R VH I FV+ V + V G PL
Sbjct: 236 IVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPL 295
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
+ +GA+ K+ + V+ +GA +L G L+ A ++ PT+ +V
Sbjct: 296 DPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGG--ERLASAA-GLFYQPTIFTDVTP 352
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
M + +EE FGP++ ++ F+T +E + LAND+ YGL V+S A +A +I+ G
Sbjct: 353 DMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTV 412
Query: 486 AINDFASNY 494
+N F
Sbjct: 413 WVNTFLDGS 421
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 2e-58
Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 21/395 (5%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
+ R + L+ L + I +++ I E +D GK+ +A + EI +I + + +KW
Sbjct: 18 DVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKW 77
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
+KP+ + K+ + + P GVV I WNYPF P++ A+ +GN V+K SE
Sbjct: 78 MKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSE 137
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMI 284
+ +II+ E V V+ G E + L+ D I F GS VG+++
Sbjct: 138 LTPNTSKVIAKIIEETF-----DEEYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIV 192
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
M A+K LTPVTLELGGK IV +D ++ A+ V ++GQ C + VH +
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESV 252
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
F+ ++ + +K PL D G + +H ++L L+ +I+ G+
Sbjct: 253 KEKFIKELKEEIKKFYGEDPLESP-DYGRIINEKHFDRLAGLL-----DNGKIVFGGNTD 306
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
Y PT++ NV +MQEE FGPI+P++ ++T +E +++ L
Sbjct: 307 RE-----TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALY 361
Query: 465 VFSGSQHRAREIAAQIQCGVAAIND----FASNYM 495
+FS + +++ + G IND A+ Y+
Sbjct: 362 LFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL 396
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 9e-57
Identities = 122/424 (28%), Positives = 203/424 (47%), Gaps = 21/424 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA LG P + E + A +A W + K+R LR ++EHQ+ +
Sbjct: 33 PANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLAR 92
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFH 187
+ + + GK + +A GEI I W EG++ P +++ R ++ K+
Sbjct: 93 LMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------ 145
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV AI WN+P I A+ +G +V+K + +S + A G
Sbjct: 146 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA----GI 201
Query: 248 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261
Query: 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + V + G
Sbjct: 262 FIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDG 321
Query: 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424
L +G L + K++ + DAL+KGA ++ G H G +F PT++V+V
Sbjct: 322 LEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHELGG---NFFQPTILVDVP 377
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G+
Sbjct: 378 ANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGI 437
Query: 485 AAIN 488
IN
Sbjct: 438 VGIN 441
|
Length = 482 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 1e-56
Identities = 132/434 (30%), Positives = 203/434 (46%), Gaps = 30/434 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELIC 129
P + + AEVD VA AR A K W K + +R L + I +
Sbjct: 21 PVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFL 80
Query: 130 EISSRDTGKTMVDASLGEI-------MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA 182
DTGK AS +I + + +E + P+ + + + K
Sbjct: 81 AAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRK-- 138
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
PLGVVG I WN P + + A+ GN +V+K SE + ++ A
Sbjct: 139 -----PLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA-- 191
Query: 243 AAVGAPENLVDVITGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
VG P+ + +V+ GF GE L VD I F G G IM+ A+ + PV+ E
Sbjct: 192 --VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFE 249
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK+A IV D D +R+A ++GQ C G ER YV R I+ FV+ + +S
Sbjct: 250 LGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAES 309
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG---SFG-HLSEGAVDQY 414
+ G P +MG L EH +K+ + A+++GA ++ G FG L+ GA +
Sbjct: 310 LKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGA---W 366
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
PT+ + + +++ EE FGP I F+++EEV+ LAND+ YGL +V++ RA
Sbjct: 367 VQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAH 426
Query: 475 EIAAQIQCGVAAIN 488
+A Q++ G+ +N
Sbjct: 427 RVARQMEVGIVWVN 440
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 2e-56
Identities = 125/422 (29%), Positives = 197/422 (46%), Gaps = 42/422 (9%)
Query: 85 RAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKT 139
+ +VD V AR+A W + S +R RI++K+ I EH E + + + D GK
Sbjct: 57 KEDVDLAVKAAREAFDHGPWPRMSGFERG---RIMMKFADLIEEHIEELAALDTIDAGKL 113
Query: 140 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK---KAKVEFH------PLG 190
+I + + +K IH K + P+G
Sbjct: 114 FALGKAVDIPAAAGLLRYYAGAADK-------------IHGETLKMSRQLQGYTLKEPIG 160
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
VVG I+ WN+P F + A+ +G +V+K +E S FY + + A G P+
Sbjct: 161 VVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA----GVPDG 216
Query: 251 LVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFI 306
+++V+TGF T A ++S VDK+ F GS VGR IM+ A+ + L V+LELGGK +
Sbjct: 217 VINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLL 276
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
+ DD DV +A+ + G+ C + R YV IY FV ++ + K G P
Sbjct: 277 IFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFD 336
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 426
+ G + EK+ + + +GA +L G G Y PT+ +V
Sbjct: 337 PRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKGYYIEPTIFTDVTED 392
Query: 427 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486
MK+ Q+E FGP+M +MKF T EE +K AN+++YGL + + A ++ I+ G
Sbjct: 393 MKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIW 452
Query: 487 IN 488
+N
Sbjct: 453 VN 454
|
Length = 501 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 3e-56
Identities = 130/436 (29%), Positives = 205/436 (47%), Gaps = 39/436 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + LG A+VD A++A K WA+ +R+++L + I +H + I
Sbjct: 23 PATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAV 82
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFH 187
+ D G+ + + + + ++ K E GR+ H V
Sbjct: 83 LECLDCGQPL--RQTRQQVIRAAENFRFFAD-----KCEEAMDGRTYPVDTHLNYTV-RV 134
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+G VG I WN PF ML+ A+ GN +V+K +E WS R+ + A
Sbjct: 135 PVGPVGLITPWNAPF------MLSTWKIAPALAFGNTVVLKPAE---WSPLTAARLAEIA 185
Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A G P+ + +++ GF E G+ALV+ V + F G G +IMRN + TL ++E
Sbjct: 186 KEA-GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSME 244
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ V +G+ C + R V I FV ++ + V++
Sbjct: 245 LGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRA 304
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS------FGHLSEGAVD 412
+ G PL + ++G L EH K+ V A +GA IL G L G
Sbjct: 305 IRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRG--- 361
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
Y PTV ++ M++ QEE FGP++ ++ F +EE ++ AND+RYGL V++ R
Sbjct: 362 NYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGR 421
Query: 473 AREIAAQIQCGVAAIN 488
A +A ++ G+ +N
Sbjct: 422 AHRVALALEAGMIWVN 437
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 1e-55
Identities = 120/428 (28%), Positives = 194/428 (45%), Gaps = 35/428 (8%)
Query: 77 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY--IIEHQ--ELICEIS 132
LG ++ E + V AR A W ++ ++R R+LL+ ++ + EL +
Sbjct: 60 LGTVQKATKEEAEAAVQAARAAFPTWRRTPPEER---ARLLLRAAALLRRRRFELAAWM- 115
Query: 133 SRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGV 191
+ GK +A ++ E I +L + L+ R M+ + + PLGV
Sbjct: 116 VLEVGKNWAEA-DADV---AEAIDFLEYYAREMLR--LRGFPVEMVPGEDNRYVYRPLGV 169
Query: 192 VGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
I WN+P I M AA+ +GN +V+K +E+ I++ A G P
Sbjct: 170 GAVISPWNFPL-AILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA----GLPPG 224
Query: 251 LVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGG 301
+V+ + G E G+ LV V I F GS VG I A+K L V E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
K+A IV +D D+ A+ VR+A GQ C+ R VH +Y F+ ++ + K++
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVI 420
G P + MG + ++++ + K L G G + E A + YF PT+
Sbjct: 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIG--KSEGRLLLG--GEVLELAAEGYFVQPTIF 400
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V +L QEE FGP++ ++K +E +++AND+ YGL VFS S +
Sbjct: 401 ADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREF 460
Query: 481 QCGVAAIN 488
+ G N
Sbjct: 461 EVGNLYAN 468
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 2e-55
Identities = 131/418 (31%), Positives = 206/418 (49%), Gaps = 34/418 (8%)
Query: 87 EVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMV 141
+V+ VA ARKA + W K + +R RILL++ + +H + + + + D GK
Sbjct: 96 DVNRAVAAARKAFDEGPWPKMTAYERS---RILLRFADLLEKHNDELAALETWDNGKPYE 152
Query: 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
++ E+ + +K + G + P+GV G I+ WN+P
Sbjct: 153 QSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQ----TLHEPIGVAGQIIPWNFP 208
Query: 202 ---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
F P LA GN IV+K +E S + +++ A G P +++V++GF
Sbjct: 209 LLMFAWKVGPALAC---GNTIVLKTAEQTPLSALYAAKLLHEA----GLPPGVLNVVSGF 261
Query: 259 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 314
T A ++S VDK+ F GS G++++ A+K+ L PVTLELGGK FIVC+D DV
Sbjct: 262 GPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD 321
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGA 373
++A A + GQ C R +VH +Y FV + A+ +K V G P + G
Sbjct: 322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRV-VGDPFKKGVEQGP 380
Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432
E EK+ + ++ GA + G FG S+G Y PTV NV M + Q+
Sbjct: 381 QIDSEQFEKILRYIKSGVESGATLECGGDRFG--SKG---YYIQPTVFSNVQDDMLIAQD 435
Query: 433 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
E FGP+ I+KF +EV++ AN++RYGL VF+ + A ++ ++ G +N F
Sbjct: 436 EIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCF 493
|
Length = 538 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 5e-55
Identities = 117/419 (27%), Positives = 191/419 (45%), Gaps = 37/419 (8%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
+++E +A A KA + +R L + + E E + E + GK + DA
Sbjct: 19 GPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78
Query: 144 SLGEIMTTCEKITWLLSE-----GEKWLKPEY--RSSGRSMIHKKAKVEFHPLGVVGAIV 196
GE+ + E GE L + R GR + ++ P+G V AI
Sbjct: 79 R-GEVARAIDTFRIAAEEATRIYGE-VLPLDISARGEGRQGLVRRF-----PIGPVSAIT 131
Query: 197 SWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 252
+N+P H + P +AA G V+K + S I+ LA G P+
Sbjct: 132 PFNFPLNLVAHKV-APAIAA---GCPFVLKPASRTPLSAL----ILGEVLAETGLPKGAF 183
Query: 253 DVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310
V+ + + LV+ + + F GSP VG + A K V LELGG A IV D
Sbjct: 184 SVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDSD 241
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370
D+ AQ + A +GQ+C +R VHR +Y F S++ VK++ G P D
Sbjct: 242 ADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATD 301
Query: 371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430
+G + +E+++ VN+A+D GA++L G +GA+ PT++ +V M++
Sbjct: 302 VGPMISESEAERVEGWVNEAVDAGAKLLTGGK----RDGAL---LEPTILEDVPPDMEVN 354
Query: 431 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
EE FGP++ + ++ +E + NDS++GL VF+ +A +++ G IND
Sbjct: 355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND 413
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 8e-55
Identities = 123/429 (28%), Positives = 200/429 (46%), Gaps = 24/429 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P T K P + +++ + A A++ W K+S +R L + + + E++
Sbjct: 23 PVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAV 82
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA-KVEFH-P 188
+ D GK + + +I + + ++ + S I + FH P
Sbjct: 83 AETWDNGKPVRETLAADIPLAIDHFRYFAGC----IRAQ--EGSISEIDENTVAYHFHEP 136
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGVVG I+ WN+P + A+ +GN +V+K +E S +I L P
Sbjct: 137 LGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLL-----P 191
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
+V+V+ GF E G+ L SS + K+ F G GR+IM+ AS+ + PVTLELGGK
Sbjct: 192 PGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPN 251
Query: 306 IVCDDVDVPHVA------QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
I DV A + V AL + G+ C R + IY F+ + + VK++
Sbjct: 252 IFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALERVKAI 310
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G PL + +GA LE EK+ + ++ ++GAE+L G L Y+ PT
Sbjct: 311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTT 370
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ M++ QEE FGP++ + F +EE +++AND+ YGLG V++ + A +
Sbjct: 371 FKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRG 429
Query: 480 IQCGVAAIN 488
IQ G N
Sbjct: 430 IQAGRVWTN 438
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 191 bits (486), Expect = 2e-54
Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 15/385 (3%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
+ R+Q LR LL+ + E+++ E +D G+ + + E++ T +I LL +++
Sbjct: 27 PLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEY 86
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
LKPE + K+ + PLGVV I +WNYP + P+ A+ +GN +V+K SE
Sbjct: 87 LKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSE 146
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMI 284
+ + +++ L + V VI G E T E L D I F GSP VG+++
Sbjct: 147 LSPHTSKLMAKLLTKYL-----DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLV 201
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
M+ A++ LTP TLELGGK IV ++ A+ ++GQ C + VHR I
Sbjct: 202 MQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI 261
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
F+ + + +K G D + H+++L L+ D G +++ G
Sbjct: 262 KDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV- 316
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
++Y PT+IVN + LMQEE FGPI+PI+ + +EV++ N L
Sbjct: 317 ----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALY 372
Query: 465 VFSGSQHRAREIAAQIQCGVAAIND 489
F + + G IND
Sbjct: 373 YFGEDKRHKELVLENTSSGAVVIND 397
|
Length = 493 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 3e-54
Identities = 117/446 (26%), Positives = 205/446 (45%), Gaps = 24/446 (5%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I ++ + Y PAT + + P + EVD VA A+ A W+ + +R
Sbjct: 4 FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKR- 62
Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
+++ K+ + E+ + + + + + GKT+ DA G+++ E + + S LK
Sbjct: 63 --QQVMFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHL-LKG 118
Query: 169 EY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH--NIFNPMLAAVFSGNGIVIKVSE 225
EY + R + PLGVV I +N+P PM A+ GN V+K SE
Sbjct: 119 EYLENVARGID---TYSYRQPLGVVAGITPFNFPAMIPLWMFPM--AIACGNTFVLKPSE 173
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283
+ ++Q A G P+ +++V+ G E AL+ + + FVGS VG
Sbjct: 174 RVPGAAMRLAELLQEA----GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEY 229
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
I A+ V G K+ +V D D+ A V AA ++GQ C D
Sbjct: 230 IYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGD 289
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
++ ++ + K + G DMG + E+++ L+ +++GA+++ G
Sbjct: 290 EADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGR- 348
Query: 404 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
G G + F PT++ NV MK+ +EE FGP++ I++ +T +E + + N + YG G
Sbjct: 349 GVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNG 408
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIN 488
A+F+ S AR+ ++ G+ IN
Sbjct: 409 AAIFTRSGAAARKFQREVDAGMVGIN 434
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 183 bits (465), Expect = 7e-52
Identities = 119/442 (26%), Positives = 200/442 (45%), Gaps = 44/442 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + + F AL+ EVD +A+A + + ++F QR ++ + + +
Sbjct: 8 PATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAA 67
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE---YRSSGRSMIHKKAKVEFH 187
+ + + GKT+ A E + + + E L E + G S +A V +
Sbjct: 68 LMTLEMGKTLASAK-AEALKCAKGFRYYAEHAEALLADEPADAAAVGAS----RAYVRYQ 122
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
PLGVV A++ WN+P + A+ +GN ++K + N + Q AL
Sbjct: 123 PLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASN----------VPQTALY---- 168
Query: 248 PENLVDVIT--GFAET--GEALVSS--VDKII---------FVGSPGVGRMIMRNASKTL 292
L D+ GF + LV S V+ I+ GS GR + A +
Sbjct: 169 ---LADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEI 225
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
LELGG D FIV D+ A+ AV A +Q++GQ+C A+RF VH D+Y F +
Sbjct: 226 KKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKF 285
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ ++ G P D+G L + ++++ V+DA+ GA IL G +G
Sbjct: 286 VARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCG---GKRPDGP-G 341
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
++PPTVI ++ M+L EE FGP+ + + +E +++AN + +GLG ++ +
Sbjct: 342 WFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAE 401
Query: 473 AREIAAQIQCGVAAINDFASNY 494
++ G IN +Y
Sbjct: 402 QERFIDDLEAGQVFINGMTVSY 423
|
Length = 457 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 4e-51
Identities = 110/417 (26%), Positives = 182/417 (43%), Gaps = 40/417 (9%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
+VD VA AR A WA S ++R LR + + ++E + + SR+TGK + +A
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QT 59
Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
E+ KI + E M +A + P GV+ +N+P H
Sbjct: 60 EVAAMAGKIDISIKAYH-----ERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLP 114
Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
++ A+ +GN +V K SE + + A G P +++++ G ETGEAL
Sbjct: 115 NGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA----GLPPGVLNLVQGGRETGEAL 170
Query: 266 VSS--VDKIIFVGSPGVGRMIMR----NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
+ +D ++F GS G ++ R K L LE+GG + +V D D+ A +
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKIL---ALEMGGNNPLVVWDVADIDAAAYL 227
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 378
V++A ++GQ C A R V F+ ++ + K + G P A MG L +
Sbjct: 228 IVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAA 287
Query: 379 HSEKLQNLVNDALDKGAEIL-------ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
+ + D L G E L A +F LS G +D V +
Sbjct: 288 AAARYLLAQQDLLALGGEPLLAMERLVAGTAF--LSPGIID----------VTDAADVPD 335
Query: 432 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
EE FGP++ + +++ +E + LAN +R+GL + S + A+I+ G+ N
Sbjct: 336 EEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWN 392
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 6e-51
Identities = 118/403 (29%), Positives = 188/403 (46%), Gaps = 25/403 (6%)
Query: 92 VAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 151
V +AR+A + R Q L LL+ + E+++ I E ++D K +A L EI+
Sbjct: 4 VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63
Query: 152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPM 209
+I + +S +W+KPE +++ V + PLGVV I +WNYP P+
Sbjct: 64 KNEIKYAISNLPEWMKPEP--VKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPL 121
Query: 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS 268
+ A+ +GN +VIK SE + + +I L + V+ G ET E L
Sbjct: 122 VGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL-----DKECYPVVLGGVEETTELLKQR 176
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328
D I + GS VG+++M+ A+K LTPVTLELGGK V D+ A+ ++
Sbjct: 177 FDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236
Query: 329 GQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
GQ C + YV ++ FV + K +K P D G + H ++L+ L
Sbjct: 237 GQTCIAPD--YVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKL 293
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446
+ G ++ G ++Y PTV+ +V + +MQEE FGPI+PI+ N
Sbjct: 294 L-----SGGKVAIGGQT-----DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNN 343
Query: 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
+E ++ N L VFS ++ +I + G +ND
Sbjct: 344 LDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVND 386
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 2e-50
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 17/426 (3%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + L P +++ + A + W +++ R Q LR + K + E + +
Sbjct: 14 PATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQ 73
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ +R+ GK + A E+ + W G LK E + +++A +E+ PLG
Sbjct: 74 MITREMGKPINQAR-AEVAKSANLCDWYAEHGPAMLKAE----PTLVENQQAVIEYRPLG 128
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
+ AI+ WN+P + + + +GNG ++K + N GC ++I G P+
Sbjct: 129 TILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVM--GCA--QLIAQVFKDAGIPQG 184
Query: 251 LVDVITGFAETGEALVSSVDKIIFV---GSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
+ + G + + + +I V GS G I A L LELGG D FIV
Sbjct: 185 VYGWLNA-DNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
+D D+ + AV Q++GQ CA A+RF + I + F + ++ G P
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDE 303
Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
+ +G + + ++L + V L +GA +L G GA + Y+ PTV+ NV M
Sbjct: 304 ENALGPMARFDLRDELHHQVEATLAEGARLLLG---GEKIAGAGN-YYAPTVLANVTPEM 359
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+EE FGP+ I E ++LANDS +GL +F+ + +AR++AA+++CG I
Sbjct: 360 TAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFI 419
Query: 488 NDFASN 493
N + ++
Sbjct: 420 NGYCAS 425
|
Length = 462 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-49
Identities = 121/429 (28%), Positives = 204/429 (47%), Gaps = 22/429 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PAT + LG + A++D +A AR+A + W++ + R + LR L + H E +
Sbjct: 22 PATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT-ALRVRCLRQLRDALRAHVEEL 80
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEF 186
E++ + G + + ++ + + + L+E W + + I + +
Sbjct: 81 RELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAW-TTDLGVASPMGIPTRRTLRR 139
Query: 187 HPLGVVGAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
+GVVGAI WN+P H I P LAA GN +V+K + + W +I
Sbjct: 140 EAVGVVGAITPWNFP-HQINLAKLGPALAA---GNTVVLKPAPDTPWCAAVLGELIAEH- 194
Query: 243 AAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
P +V+++T AL++ VD + F GS GR +M +A+ TL V LEL
Sbjct: 195 --TDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLEL 252
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK AFIV DD D+ +A +GQ CA R V R Y V+ A + S+
Sbjct: 253 GGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSI 312
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G P G + +++Q+ ++ A+ +G G G ++ + PTV
Sbjct: 313 KPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG--GRPADRDRGFFVEPTV 370
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
I +++ ++ +EE FGP++ ++ + D++ V++ANDS YGL VF RA +AA+
Sbjct: 371 IAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAAR 430
Query: 480 IQCGVAAIN 488
++ G +N
Sbjct: 431 VRTGTVNVN 439
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (449), Expect = 2e-49
Identities = 121/440 (27%), Positives = 208/440 (47%), Gaps = 27/440 (6%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
+P T L ++D V+ AR + W+ SS +R+ L L + H E
Sbjct: 41 DPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE 100
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + DTGK + + +I I W +K + E ++ H+ A +
Sbjct: 101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDK-VYGEVATTSS---HELAMIVRE 156
Query: 188 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
P+GV+ AIV WN+P P LAA GN +++K SE + S + + A
Sbjct: 157 PVGVIAAIVPWNFPLLLTCWKLGPALAA---GNSVILKPSEKSPLSAIRLAGLAKEA--- 210
Query: 245 VGAPENLVDVITGFA-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 300
G P+ +++V+TGF E G+AL + +D I F GS G+ ++++A + + V LE G
Sbjct: 211 -GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAG 269
Query: 301 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GK A IV D D+ A + GQ C R + I F++ + + ++
Sbjct: 270 GKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G PL MG L H++ + + + + KG +L + G + PT+
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAA------AIGPTI 383
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
V+V+ L +EE FGP++ + +F ++E+ ++LANDS+YGLG AV++ RA ++ +
Sbjct: 384 FVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRR 443
Query: 480 IQCGVAAINDFASNYMCQVF 499
++ G +N++ M F
Sbjct: 444 LKAGSVFVNNYNDGDMTVPF 463
|
Length = 494 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 175 bits (444), Expect = 8e-49
Identities = 86/298 (28%), Positives = 152/298 (51%), Gaps = 16/298 (5%)
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGV+ AI +N+P + + + + A+ + N +V+K SE S Y I L G P
Sbjct: 140 LGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS-ALYLADI---LYEAGLP 195
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
++ V+TG E + L+++ VD + F G +G+ I A LELGG D
Sbjct: 196 PQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPL 253
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV +D D+ A +AV+ + ++SGQ C +R V + F + + ++ G P+
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
DMG + + + VN+A+ +GA +L G++ +GA+ + PTV+ V+
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLL----GNVRDGAL---YAPTVLDRVDP 366
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 483
+M L++EE FGP+ P+++F ++ ++++N + YGL V + A++Q G
Sbjct: 367 SMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVG 424
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 8e-48
Identities = 114/396 (28%), Positives = 181/396 (45%), Gaps = 20/396 (5%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
S + R+ L+ LL+ + E+++ I +D GK ++ E+ + E +KW
Sbjct: 19 SAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKW 78
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
+ PE + + KA++ PLGVV I +WN+PF P++ A+ +GN +V+K SE
Sbjct: 79 MAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSE 138
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV-DKIIFVGSPGVGRMI 284
A + ++I L + VI G AL+ DKI F GSP VGR+I
Sbjct: 139 LAPATSALLAKLIPEYLDT-----KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRII 193
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFYVHRD 343
M A+K LTPVTLELGGK IV VD+ + IA ++GQ C + V
Sbjct: 194 MAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEES 253
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+ + ++ P K D+ + H ++L L++D A+ + G
Sbjct: 254 FAPTLIDALKNTLEKFFGENPKESK-DLSRIVNSHHFQRLSRLLDDP--SVADKIVHG-- 308
Query: 404 GHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460
G D+ Y PT++++ +M EE FGP++PI+ EE +++ N
Sbjct: 309 -----GERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKP 363
Query: 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 496
L VF+ ++ R I A+ G ND Y
Sbjct: 364 LAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAI 399
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 1e-46
Identities = 118/448 (26%), Positives = 198/448 (44%), Gaps = 59/448 (13%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G +E K+ PA + +G ++ ++ + A +A + W K S + R R
Sbjct: 43 GERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRA---R 99
Query: 116 ILLK---YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172
ILL+ I + ++ GK +A + T E I +L EY
Sbjct: 100 ILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-AD---TAEAIDFL----------EY-- 143
Query: 173 SGRSMIHKKAKVE------------FHPLGVVGAIVSWNYPFHNIFNPM-LAAVFSGNGI 219
R M+ + PLGV I WN+PF I M LAA+ +GN +
Sbjct: 144 YARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPF-AIMAGMTLAAIVAGNTV 202
Query: 220 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVG 276
++K + + + +++ A G P +V+ + G +E G+ LV I F G
Sbjct: 203 LLKPASDTPVIAAKFVEVLEEA----GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTG 258
Query: 277 SPGVGRMIMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 330
S VG I A+K L V E+GGKDA +V +D D+ A+ V +A SGQ
Sbjct: 259 SREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQ 318
Query: 331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390
C+ R VH D+Y + +V ++ K ++ G P Y MG + ++ + +
Sbjct: 319 KCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAY-MGPVI----NQASFDKIMSY 373
Query: 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEV 450
++ G E R G + + + PT+ +V+ ++MQEE FGP++ +K +
Sbjct: 374 IEIGKE-EGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHA 432
Query: 451 VKLANDSRYGLGCAVFSGSQH---RARE 475
+++AN++ YGL AV S ++ +AR
Sbjct: 433 LEIANNTEYGLTGAVISNNREHLEKARR 460
|
Length = 514 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 2e-46
Identities = 125/432 (28%), Positives = 198/432 (45%), Gaps = 32/432 (7%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
Y PAT + + S +VD V A A W +++ K R + L L I E+ ++
Sbjct: 21 YNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIH 179
E+ SR+ GK + EI + + L+ GE Y SMI
Sbjct: 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGE------YLEGHTSMIR 134
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
+ PLGVV +I WNYP + A+ +GN +V+K SE +
Sbjct: 135 RD------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-LKL---- 183
Query: 240 AALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
A LA P +V+++ G +T G+ L V + GS G I+ + + ++
Sbjct: 184 AELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTH 243
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
+ELGGK IV DD D+ V + ++GQ+C A R Y R IY V ++ V
Sbjct: 244 MELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAV 303
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
++ +G P ++G L L H E++ V +A G + G G +G YF
Sbjct: 304 ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITG--GEKRKGN-GYYFA 360
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT++ ++Q+E FGP++ I F+ +E+VV ANDS+YGL +V++ RA +
Sbjct: 361 PTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRL 420
Query: 477 AAQIQCGVAAIN 488
+A++Q G +N
Sbjct: 421 SARLQYGCTWVN 432
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 3e-46
Identities = 124/445 (27%), Positives = 210/445 (47%), Gaps = 50/445 (11%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELI 128
P + + +VD VA A++A + W K + + R + + L + EHQE +
Sbjct: 28 PTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEEL 87
Query: 129 CEISSRDTG-------KTMVDASLGEIMTT------CEKITWLLSEGEKWLKPEYRSSGR 175
I S D+G KT V S I T C+KI +G+ + R +
Sbjct: 88 ATIESLDSGAVYTLALKTHVGMS---IQTFRYFAGWCDKI-----QGKTIPINQARPNRN 139
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ K+ P+GV G ++ WNYP + M A + +GN +V+K ++ + +
Sbjct: 140 LTLTKR-----EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF- 193
Query: 236 RIIQAALAA-VGAPENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRNASKT 291
A L G P+ +++++ G G+ L D K+ F GS +G+ IM++ + +
Sbjct: 194 ----AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVS 249
Query: 292 -LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350
L V+LELGGK I+ D D+ ++ + + + G+NC A R +V I+ FV
Sbjct: 250 NLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVR 309
Query: 351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 410
+V + VK + G PL D G H +KL + +GA ++ G
Sbjct: 310 RVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK-------Q 362
Query: 411 VDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAV 465
VD+ +F PTV +V M + +EE+FGPIM I KF+ + V++ AND+ YGL V
Sbjct: 363 VDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGV 422
Query: 466 FSGSQHRAREIAAQIQCGVAAINDF 490
F+ ++A ++ +++ G +N +
Sbjct: 423 FTKDINKALYVSDKLEAGTVFVNTY 447
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 6e-46
Identities = 119/415 (28%), Positives = 184/415 (44%), Gaps = 19/415 (4%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
++ VA+ R+ + S + R+ L+ LL+ + +++E I + +D GK V+A E
Sbjct: 8 LEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDE 67
Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
+ + LS +KW+ P+ A+V PLGVV SWN+P
Sbjct: 68 VGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLE 127
Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 267
P++ A+ +GN +V+K SE A + F I L + V VI G GE L+
Sbjct: 128 PLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYLDS-----KAVKVIEGGPAVGEQLLQ 182
Query: 268 SV-DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326
DKI F GSP VGR+IM A+K LTPV LELGGK IV D + ++AV +
Sbjct: 183 HKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIV-DSLSSSRDTKVAVNRIVG 241
Query: 327 S-----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381
+GQ C + V + + + +K P K M + +H +
Sbjct: 242 GKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKS-MARILNKKHFQ 300
Query: 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441
+L NL+ D A I+ GS + PT+++N +M EE FGP++PI
Sbjct: 301 RLSNLLKDPRVA-ASIVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPI 354
Query: 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 496
+ E+ + N L F+ ++ R I ++ G ND Y C
Sbjct: 355 ITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYAC 409
|
Length = 484 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-44
Identities = 114/443 (25%), Positives = 194/443 (43%), Gaps = 37/443 (8%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
V PA + + + + + + A++A K W +R + +R + +
Sbjct: 10 GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL 69
Query: 122 IEHQELICEISSRDTGKTMVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ +E + ++ S + GK + + LGE+ + C+ L + P R G M+
Sbjct: 70 RKKKEALGKLVSLEMGKILPEG-LGEVQEMIDICDFAVGLSRQLYGLTIPSERP-GHRMM 127
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
+ ++PLGVVG I ++N+P ++ N +A V GN +V K S + +
Sbjct: 128 EQ-----WNPLGVVGVITAFNFPV-AVWGWNAAIALV-CGNVVVWKPSPTTPLTAIAVTK 180
Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
I+ L G P + ++ G A+ GEALV V + F GS VGR + + +
Sbjct: 181 IVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGR 240
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
LELGG +A IV +D D+ + + AA+ ++GQ C R VH IY + ++ K
Sbjct: 241 SLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK 300
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK----GAEILARGSFGHLSEGA 410
K V G PL +G L H++ + A+++ G +L FG
Sbjct: 301 AYKQVRIGDPLDDGTLVGPL----HTKAAVDNYLAAIEEAKSQGGTVL----FGGKVIDG 352
Query: 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470
Y PT IV +++EE F PI+ ++KF+T EE + N+ GL ++F+
Sbjct: 353 PGNYVEPT-IVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDL 411
Query: 471 HRAREI-----AAQIQCGVAAIN 488
R CG+ +N
Sbjct: 412 ---RNAFRWLGPKGSDCGIVNVN 431
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 5e-43
Identities = 124/441 (28%), Positives = 202/441 (45%), Gaps = 29/441 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
RT S V P+T K A ++ EV++ + A+ AQK WAK+ +R + L
Sbjct: 25 RTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKA 84
Query: 118 LKYIIEHQELICEISSRDTGKTMVDA------SLGEIMTTCEKITWLLSEGEKWLKPEYR 171
+ EH+ I E ++ K DA S I T E+ +L EG+ + +
Sbjct: 85 AAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFP 144
Query: 172 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231
+ R+ +K+ PLGVV AI +NYP + + + A+ +GN +V+K + +
Sbjct: 145 GNERNKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAA 201
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288
++ A G P+ L+ +TG +E G+ L V+ I F G G I + A
Sbjct: 202 ---LHMVHCFHLA-GFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGD-TGIAISKKA 256
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
+ P+ +ELGGKDA IV +D D+ A ++ SGQ C + V +
Sbjct: 257 G--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADAL 314
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
V +V V ++ GPP D+ + + ++ LV DA +KGA
Sbjct: 315 VEKVNAKVAKLTVGPP-EDDCDITPVVSESSANFIEGLVMDAKEKGATF-------CQEW 366
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL-GCAVFS 467
P ++ NV M++ EE FGP++P+++ N+ EE + N S +GL GC VF+
Sbjct: 367 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC-VFT 425
Query: 468 GSQHRAREIAAQIQCGVAAIN 488
++A I+ ++ G IN
Sbjct: 426 RDINKAILISDAMETGTVQIN 446
|
Length = 496 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 1e-40
Identities = 120/440 (27%), Positives = 188/440 (42%), Gaps = 33/440 (7%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY- 120
S T + PAT + S EVD VA AR+ W ++S QR +LL+Y
Sbjct: 14 SGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTS---VLLRYQ 70
Query: 121 --IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ EH++ I E+ + + GKT DA LG++ E + +
Sbjct: 71 ALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVD 129
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ PLGV I +N+P A+ GN V+K SE + +
Sbjct: 130 VYSIR---QPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELF 186
Query: 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
A GAP+ +++V+ G E + L+ V + FVGS +GR I S V
Sbjct: 187 SEA----GAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQ 242
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
G K+ +V D D A V AA ++GQ C A+ V + V
Sbjct: 243 ALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS--------AAVLVGAADEWV 294
Query: 357 -------KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
+ + GP +MG L + +++ +L+ +GAE+L G G+ +G
Sbjct: 295 PEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR-GYKVDG 353
Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
+ + PT++ V TMK QEE FGP++ +++ +T EE + L N S YG G A+F+
Sbjct: 354 YEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTR 413
Query: 469 SQHRAREIAAQIQCGVAAIN 488
AR +I+ G +N
Sbjct: 414 DGAAARRFQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 5e-39
Identities = 111/444 (25%), Positives = 194/444 (43%), Gaps = 27/444 (6%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G ++E K+ P + +G S+ + + A KA + W K+ ++R L
Sbjct: 39 GERVETENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILF 98
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
+ + + ++ GK +A E I ++ + ++
Sbjct: 99 KAAAIVRRRRHEFSALLVKEVGKPWNEAD----AEVAEAIDFMEYYARQMIELAKGKPVN 154
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
S + + + P GV I WN+PF + +A + +GN +V+K +E A +
Sbjct: 155 SREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV 214
Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVGSPGVGRMIMRNASKT- 291
I++ A G P+ +V + G +E G+ LV I F GS VG I A+K
Sbjct: 215 EILEEA----GLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQ 270
Query: 292 -----LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
L V E+GGKD IV +D D+ AQ A +A +GQ C+ R VH +Y
Sbjct: 271 PGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYD 330
Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE--ILARGSFG 404
V + +I +S+ GPP + +G + +K N + + ++ G L G G
Sbjct: 331 EVVERFVEITESLKVGPPDSADVYVGPVI----DQKSFNKIMEYIEIGKAEGRLVSGGCG 386
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
S+G + PT+ +V+ +L QEE FGP++ ++ + +E +++AN++ YGL
Sbjct: 387 DDSKG---YFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGG 443
Query: 465 VFSGSQHRAREIAAQIQCGVAAIN 488
V S ++ A+ + G N
Sbjct: 444 VISNNRDHINRAKAEFEVGNLYFN 467
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 3e-37
Identities = 103/443 (23%), Positives = 174/443 (39%), Gaps = 31/443 (6%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
E V A + +G +AE + + A A K W + R + L +
Sbjct: 31 KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLL 90
Query: 122 IEHQELICEISSRDTGKTMVDAS--LGEIMTTCE--KITWLLSEGEKWLKPEYRSSGRSM 177
+ + + + GK V+A + E + L Y
Sbjct: 91 RRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNES 150
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
+ LG I WN+P ++A V GN ++ K +E+A G F I
Sbjct: 151 FYV-------GLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEI 203
Query: 238 IQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK---- 290
A G P +V + G E G L + I F GS G+ I A++
Sbjct: 204 FHEA----GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPG 259
Query: 291 --TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
+ +E GGK+A IV + D V + V +A GQ C+ A R + + Y
Sbjct: 260 QTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPV 319
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ ++ K + +S GPP D+G + E K+ + + ++G +++ G E
Sbjct: 320 LERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK---RLE 375
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVF 466
G + PTV+ V ++ QEE FGP++ ++++ D+ E +++AN + YGL V+
Sbjct: 376 G-EGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 467 SGSQHRAREIAAQIQCGVAAIND 489
S + E + G IN
Sbjct: 435 SRKREHLEEARREFHVGNLYINR 457
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 2e-35
Identities = 108/489 (22%), Positives = 193/489 (39%), Gaps = 48/489 (9%)
Query: 19 FLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG 78
F+ + VP + + D + I T E + +G
Sbjct: 5 FVNRIFDLEVPLEALADALKAFDEKEWEAIPII---NGEETETGEGAPVIDPADHERTIG 61
Query: 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ-ELICEISSRDTG 137
+VD +A A A W+ + ++R + L + ++ ELI +++ + G
Sbjct: 62 EVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIA-LAAAEAG 120
Query: 138 KTMVDASLGEIMTTCEKITWL-----LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 192
KT+ DA E+ E I + + +G + +E H GV
Sbjct: 121 KTLADA-DAEVR---EAIDFCRYYAAQARELFSDPELPGPTG-----ELNGLELHGRGVF 171
Query: 193 GAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 251
I WN+P IF + AA+ +GN ++ K +E R ++ A G P ++
Sbjct: 172 VCISPWNFPL-AIFTGQIAAALAAGNTVIAKPAEQTPLIAA---RAVELLHEA-GVPRDV 226
Query: 252 VDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMR---NASKTLTPVTLELGGKDAF 305
+ ++ G E GEALV+ +D +IF GS ++I R + P+ E GGK+A
Sbjct: 227 LQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAM 286
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV + V++A S+GQ C+ Y+ +I F+ + + S+ G P
Sbjct: 287 IVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPW 346
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ----YFPPTVIV 421
D+G L + L+ L RG ++ +D + P +I
Sbjct: 347 DLSTDVGPLIDKPAGKLLRAHTE---------LMRGEAWLIAPAPLDDGNGYFVAPGIIE 397
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
V + + E FGPI+ +++F + +E ++ N + YGL + S + +
Sbjct: 398 IVG--IFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRER 455
Query: 480 IQCGVAAIN 488
++ G IN
Sbjct: 456 VEAGNLYIN 464
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 1e-34
Identities = 102/362 (28%), Positives = 172/362 (47%), Gaps = 20/362 (5%)
Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
D GK +++S+ E+ I L + + W+ PE + + A++ PLGVV
Sbjct: 59 DLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLV 118
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
I +WNYPF +P++ A+ +GN +V+K SE A S ++++ L + + V V
Sbjct: 119 ISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDS-----SAVRV 173
Query: 255 ITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313
+ G ET L DKI + GS +GR+IM A+K LTPV LELGGK +V D D+
Sbjct: 174 VEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDL 233
Query: 314 P-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 372
V +I ++GQ C + ++ + + K +++ P+ K DM
Sbjct: 234 KVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESK-DMS 292
Query: 373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKL 429
+ H ++L L+++ E+ + +G G D+ PT++++V +
Sbjct: 293 RIVNSTHFDRLSKLLDE-----KEVSDKIVYG----GEKDRENLKIAPTILLDVPLDSLI 343
Query: 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
M EE FGP++PI+ N EE + L +F+ ++ AA + G +ND
Sbjct: 344 MSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVND 403
Query: 490 FA 491
A
Sbjct: 404 IA 405
|
Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-34
Identities = 103/416 (24%), Positives = 194/416 (46%), Gaps = 43/416 (10%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK------T 139
A+VD V AR A WA+ SF++R+ + + E++E + E+ +R+TGK T
Sbjct: 37 AQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT 96
Query: 140 MVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196
V A + +I + + T GEK M A + P GVV
Sbjct: 97 EVTAMINKIAISIQAYHERT-----GEK---------RSEMADGAAVLRHRPHGVVAVFG 142
Query: 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
+N+P H ++ A+ +GN +V K SE W ++ Q A G P +++++
Sbjct: 143 PYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA----GLPAGVLNLVQ 198
Query: 257 GFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDV 313
G ETG+AL + +D ++F GS G ++ R A + + LE+GG + ++ + D+
Sbjct: 199 GGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI 258
Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYD-- 370
+ +++A S+GQ C A R V + F++++ + K ++ G A +
Sbjct: 259 DAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDA---EPQ 315
Query: 371 --MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 428
MGA+ + ++ L L G + L +++ I++V +
Sbjct: 316 PFMGAVISEQAAQGLVAAQAQLLALGGKSLL-----EMTQLQAGTGLLTPGIIDVTGVAE 370
Query: 429 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
L EE FGP++ +++++ +E ++LAN++R+GL + S + + +I+ G+
Sbjct: 371 LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGI 426
|
Length = 487 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 2e-31
Identities = 114/453 (25%), Positives = 203/453 (44%), Gaps = 50/453 (11%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I + R Q E+ PAT + L A S A+V+ VA AR A WA+ S ++R
Sbjct: 2 FIDGKWRAGQGES-FSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERI 60
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
++ + E +E + + +R+TGK + + E+ + K+ +S +K +
Sbjct: 61 AVVQRFAALLEERKEALARVIARETGKPLWET-RTEVASMIGKVA--IS-----IKAYHE 112
Query: 172 SSGRS---MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
+G S M +A + P GVV +N+P H ++ A+ +GN +V K SE
Sbjct: 113 RTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTP 172
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286
W ++ + A G P +++++ G ETG AL + +D ++F GS G ++ R
Sbjct: 173 WVAEETVKLWEKA----GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228
Query: 287 NAS----KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+ K L LE+GG + IV + D+ + +++A S+GQ C A R V
Sbjct: 229 QFAGRPEKILA---LEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPD 285
Query: 343 D-----IYALFVSQVAKIVKSVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDAL 391
A V ++ G +D MGA+ L+ +++L L
Sbjct: 286 GAQGDAFLARLVEVAERLT---------VGAWDAEPQPFMGAVISLQAAQRLLAAQAKLL 336
Query: 392 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 451
G + L L GA I++V +L EE FGP++ +++++ +E +
Sbjct: 337 ALGGKSLLA--MRQLDPGAA---LLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391
Query: 452 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
+AN++R+GL + S + +I+ G+
Sbjct: 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGI 424
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 4e-29
Identities = 100/375 (26%), Positives = 174/375 (46%), Gaps = 17/375 (4%)
Query: 98 AQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKI 155
A K+W + +R + +R + + + + + S + GK + + + EI+ C+
Sbjct: 68 AAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFA 127
Query: 156 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-FNPMLAAVF 214
L + + P R + H +V ++PLG+VG I ++N+P + +N +A V
Sbjct: 128 VGLSRQLNGSIIPSERPN-----HMMMEV-WNPLGIVGVITAFNFPCAVLGWNACIALV- 180
Query: 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALV--SSVDKI 272
GN +V K + +++ L P + G AE GEA+ + + +
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240
Query: 273 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 332
F GS VG M+ + + LEL G +A IV DD D+ + + AA+ ++GQ C
Sbjct: 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300
Query: 333 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
R +H IY + Q+ + K V G PL +G L E + + +
Sbjct: 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS 360
Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 452
+G +IL GS SEG + PT IV ++ +++EE FGP++ +MKF T EE ++
Sbjct: 361 QGGKILTGGSAIE-SEG---NFVQPT-IVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415
Query: 453 LANDSRYGLGCAVFS 467
+ N GL ++F+
Sbjct: 416 INNSVPQGLSSSIFT 430
|
Length = 508 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 3e-26
Identities = 109/440 (24%), Positives = 191/440 (43%), Gaps = 31/440 (7%)
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS + + PAT + + P + E V+ A++A +W + R+ R++LK+
Sbjct: 126 QSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQ---RVMLKF 182
Query: 121 IIEHQELICEISSR-------DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173
QELI + + + GKT+ D S G+I E + + EY +
Sbjct: 183 ----QELIRKNMDKLAMNITTEQGKTLKD-SHGDIFRGLEVVEHACGMATLQMG-EYLPN 236
Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233
+ + + E PLGV I +N+P AV GN ++K SE +
Sbjct: 237 VSNGVDTYSIRE--PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS-- 292
Query: 234 YFRIIQAALA-AVGAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASK 290
+I A LA G P+ +++++ G +T A+ D + FVGS G I A+
Sbjct: 293 ---VILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349
Query: 291 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI--YALF 348
+ +G K+ +V D ++ + A ++GQ C D +
Sbjct: 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDK 409
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ + AK +K P A D+G + + E++ L+ +D GA++L G +
Sbjct: 410 LVERAKALKVTCGSEPDA---DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPG 466
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
+ PT++ V M+ +EE FGP++ M+ N+ +E + + N ++YG G A+F+
Sbjct: 467 YEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTS 526
Query: 469 SQHRAREIAAQIQCGVAAIN 488
S AR+ I+ G IN
Sbjct: 527 SGAAARKFQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-24
Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 65/443 (14%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQ-FLRI 116
RT + +V ++ A L + A V++ + A +A+K WA+ F+ R FL+
Sbjct: 43 RTGNTGKQVMPHDHA--HVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKA 100
Query: 117 --LL--KYIIEHQELICEISSRDT---------GKTMVDASLGEIMTTCEKITWL---LS 160
LL KY R GK + A EI CE I +L +
Sbjct: 101 ADLLSGKY-------------RYELNAATMLGQGKNVWQA---EIDAACELIDFLRFNVK 144
Query: 161 EGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI-FNPMLAAVFSGNG 218
E+ + SS + ++ +E+ PL G V A+ +N F I N A GN
Sbjct: 145 YAEELYAQQPLSSPAGVWNR---LEYRPLEGFVYAVSPFN--FTAIGGNLAGAPALMGNV 199
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFV 275
++ K S+ A S ++I++ A G P +++ + G G+ +++S + F
Sbjct: 200 VLWKPSDTAVLSNYLVYKILEEA----GLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255
Query: 276 GSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
GS + + + +T + E GGK+ +V DV + VR A + G
Sbjct: 256 GSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQG 315
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389
Q C+ A R YV ++ ++ + +K + G P MGA+ + ++++ ++
Sbjct: 316 QKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDH 375
Query: 390 A-LDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
A D AEI+A G S G YF PTVI + KLM EE FGP++ + +
Sbjct: 376 AKSDPEAEIIAGGKCDD-SVG----YFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDS 430
Query: 448 --EEVVKLAND-SRYGLGCAVFS 467
EE ++L + S Y L A+F+
Sbjct: 431 DFEETLELVDTTSPYALTGAIFA 453
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 6e-24
Identities = 93/420 (22%), Positives = 167/420 (39%), Gaps = 31/420 (7%)
Query: 77 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136
+G + A V + A++A W + K+R L L + H + + R+
Sbjct: 65 VGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREA 124
Query: 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196
GKT+ +A I E + + R + + + GV I
Sbjct: 125 GKTIHNA----IAEVREAVDFC------------RYYAKQVRDVLGEFSVESRGVFVCIS 168
Query: 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
WN+P + AA+ +GN ++ K +E S ++Q A G P + ++
Sbjct: 169 PWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA----GFPAGTIQLLP 224
Query: 257 GFAET-GEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDD 310
G G AL S + + F GS V ++I + A + PV L E GG++A IV
Sbjct: 225 GRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDST 284
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370
V + +R+A S+GQ C+ V D+ ++ + ++ + G P D
Sbjct: 285 ALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTD 344
Query: 371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430
+G + E + L + +I A+ + + PT+ ++ +L
Sbjct: 345 VGPVIDAEAKQNLLAHIEHMSQTQKKI-AQLTLDDSRACQHGTFVAPTLF-ELDDIAEL- 401
Query: 431 QEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
EE FGP++ ++++ E ++V N + YGL V S + R I + G +N
Sbjct: 402 SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVN 461
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 8e-24
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GVV AI ++N+P + I + + A+ +G +++K + S + ++ A G
Sbjct: 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GL 179
Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
PE + E LV+ V F+GS VG M+ + T LE GG
Sbjct: 180 PEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPV 238
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV D+ + V+ +GQ C +R +V +I F ++A + + G P
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT 298
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
++G L ++++ VN+A+ GA +L G LS D + PTV+++
Sbjct: 299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGK--RLS----DTTYAPTVLLDPPR 352
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS----QHRAREIAA 478
K+ +E FGP++ + ++ +E + AN AVF+ R + A
Sbjct: 353 DAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDA 409
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 418 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 477
TV+V+V+ M + QEE FGP++P+++F +EE + LAND+ YGL VF+ +RA +A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 478 AQIQCGVAAINDFASNYM 495
+++ G IND +
Sbjct: 317 ERLRAGTVYINDSSIGVG 334
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 3e-21
Identities = 93/421 (22%), Positives = 172/421 (40%), Gaps = 37/421 (8%)
Query: 78 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 137
G + A+V++ + A A +W+ + +R L + + + R+ G
Sbjct: 142 GTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAG 201
Query: 138 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
KT+ +A I E + +L ++ + R + PLG V I
Sbjct: 202 KTLSNA----IAEVREAVDFL-----RYYAGQAR-------DTFGNLTHRPLGPVVCISP 245
Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
WN+P + AA+ +GN ++ K +E R++ A G P ++ ++ G
Sbjct: 246 WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEA----GVPPGVLQLLPG 301
Query: 258 FAET-GEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDDV 311
ET G AL + V ++F GS V R+I R A + P+ L E GG++A IV
Sbjct: 302 RGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSA 361
Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
V + +A S+GQ C+ + D+ ++ + + + G P D+
Sbjct: 362 LAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDV 421
Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV--NVNHTMKL 429
G + E ++ + KG + + L +G + PT+I N++
Sbjct: 422 GPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGT---FVAPTLIELENLDE---- 474
Query: 430 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+Q E FGP++ ++++ D +EV+ N + YGL V + + + G +
Sbjct: 475 LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYV 534
Query: 488 N 488
N
Sbjct: 535 N 535
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 94.1 bits (235), Expect = 4e-20
Identities = 101/438 (23%), Positives = 183/438 (41%), Gaps = 70/438 (15%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
+V++ +A AR A W+++ ++R L + ++ + + R+ GKT+ DA
Sbjct: 583 DAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDA 642
Query: 144 SLGEIMTTCEKITW----------LLSEGEKWLKP-----EYRSSGRSMIHKKAKVEFHP 188
+ E+ E + + L EK P E R GR
Sbjct: 643 -IAEVR---EAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGR------------- 685
Query: 189 LGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
GV I WN+P IF + AA+ +GN ++ K +E ++ A G
Sbjct: 686 -GVFVCISPWNFPL-AIFLGQVAAALAAGNTVIAKPAEQTPLIA---AEAVKLLHEA-GI 739
Query: 248 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGG 301
P++++ ++ G A G AL + + + F GS R+I R A++ V L E GG
Sbjct: 740 PKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGG 799
Query: 302 KDAFI---------VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
++A I V DDV V +A +S+GQ C+ +V DI + +
Sbjct: 800 QNAMIVDSTALPEQVVDDV---------VTSAFRSAGQRCSALRVLFVQEDIADRVIEML 850
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ + G P D+G + E L + + + + A +LA+ L G +
Sbjct: 851 KGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI-ERMKREARLLAQLP---LPAGTEN 906
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQ 470
+F ++ + ++ E FGPI+ ++++ + +V+ N + YGL + S +
Sbjct: 907 GHFVAPTAFEIDS-ISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIE 965
Query: 471 HRAREIAAQIQCGVAAIN 488
A IA +++ G +N
Sbjct: 966 ETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 1e-18
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 28/302 (9%)
Query: 183 KVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+ E+ PL G V AI +N F I N A GN ++ K S+ A S RI++
Sbjct: 163 RTEYRPLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220
Query: 241 ALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGV----GRMIMRNASK--T 291
A G P +++ + G + +++ D I F GS + + +N +
Sbjct: 221 A----GLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHN 276
Query: 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351
+ E GGKD +V DV HV +R A + GQ C+ R YV ++ F +
Sbjct: 277 FPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGR 336
Query: 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA--EILARGSFGHLSEG 409
+ + V G P MGA+ + K+ + A + ILA G + S G
Sbjct: 337 LLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDD-SVG 395
Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLA-NDSRYGLGCAV 465
YF PTV+ + + LM+EE FGP++ + + D +E++ L + + YGL AV
Sbjct: 396 ----YFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAV 451
Query: 466 FS 467
F+
Sbjct: 452 FA 453
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 9e-17
Identities = 100/426 (23%), Positives = 180/426 (42%), Gaps = 69/426 (16%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
S +V+ +A A+ A W+ + +R L + H + ++ R+ GKT+ +A
Sbjct: 588 SAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANA 647
Query: 144 SLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
+ E+ E + +L ++ + L PLG V I WN+
Sbjct: 648 -IAEVR---EAVDFLRYYAAQARRLLNGPGHK---------------PLGPVVCISPWNF 688
Query: 201 PFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALA-----AVGAPENLVDV 254
P IF +AA +GN ++ K +E +I AA A G P++ + +
Sbjct: 689 PL-AIFTGQIAAALVAGNTVLAKPAEQTP--------LI-AARAVRLLHEAGVPKDALQL 738
Query: 255 ITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT-PVTL--ELGGKDAFIVC 308
+ G T G ALV+ + ++F GS V R+I R +K PV L E GG++A IV
Sbjct: 739 LPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV- 797
Query: 309 DDVDVP-HVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
D +P V + +A S+GQ C+ A R + D+ ++ + + + G P
Sbjct: 798 DSSALPEQVVADVIASAFDSAGQRCS-ALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856
Query: 367 GKYDMG------AL-CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
D+G A + H E ++ ++ + +E + PT+
Sbjct: 857 LSTDVGPVIDAEAQANIEAHIEAMRAA--------GRLVHQLPLPAETEKGT--FVAPTL 906
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIA 477
I ++ + ++ E FGP++ +++F DE V+ N + YGL + S +
Sbjct: 907 I-EIDS-ISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVT 964
Query: 478 AQIQCG 483
++I+ G
Sbjct: 965 SRIRAG 970
|
Length = 1208 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 5e-15
Identities = 70/375 (18%), Positives = 132/375 (35%), Gaps = 35/375 (9%)
Query: 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
A + K + + +R FL +++ + I + TGK I +
Sbjct: 8 ADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKG--WMFAENICGDQVQ 65
Query: 155 ITWLLSEGEKWLKP----EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210
+ + P + G ++ P G V I ++N+P +
Sbjct: 66 LRARAFVIYSYRIPHEPGNHLGQGLKQ---QSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122
Query: 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--S 268
A+ GN +++K S R++ A P V +I G +T +AL+ +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLL---PPEDVTLINGDGKTMQALLLHPN 179
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQS 327
++F GS V + +A + + LEL G + ++ D V +VA V+
Sbjct: 180 PKMVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
SGQ C +V + +V+ + A LA + L + ++
Sbjct: 238 SGQKCTAQSMLFVPEN------WSKTPLVEKLKA--LLARRKLEDLLLGPVQTFTTLAMI 289
Query: 388 NDA-LDKGAEILARGSFGHLSE-----GAVDQYFPPTVIVN--VNHTMKLMQEEAFGPIM 439
G+ +L G GA + + T +L+ EE FGP
Sbjct: 290 AHMENLLGSVLLFSGKELKNHSIPSIYGACVA--SALFVPIDEILKTYELVTEEIFGPFA 347
Query: 440 PIMKFNTDEEVVKLA 454
++++ D+ + L
Sbjct: 348 IVVEYKKDQLALVLE 362
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 6e-15
Identities = 91/419 (21%), Positives = 156/419 (37%), Gaps = 44/419 (10%)
Query: 87 EVDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----- 140
+V VA AR +F +R + L+ L +Y+ E +E + +++ TG T
Sbjct: 37 DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYALAA-TTGATRRDNWV 95
Query: 141 -VDASLGEIMTTCEKITWLLSEGEKWLKPEY-----RSS--GRSMIHKKAKVEFHPLGVV 192
+D +G + T L + + E+ S GR ++ K V
Sbjct: 96 DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQ----- 150
Query: 193 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENL 251
I ++N+P + A +G + K + A + ++++ L PE
Sbjct: 151 --INAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLL----PEGS 204
Query: 252 VDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMR--NASKTLTPVTLELGGKDAFIV 307
+ +I G A G+ L + D + F GS + N + E +A I+
Sbjct: 205 LQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAIL 262
Query: 308 CDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
+D D P A VR +GQ C R V + + + + + V G
Sbjct: 263 GEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLG 322
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
P DMG L LE ++ V L GAE+ G +GA +FPPT+++
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGP--GRLDGA---FFPPTLLLA 377
Query: 423 VN-HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+ + EAFGP+ + E +LA L + + AR+ +
Sbjct: 378 EDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGL 436
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 4e-13
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
A VD+ VA A+ AQK + K + R + + + + ++ + E + E++ +TG V+ +
Sbjct: 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI 63
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
+ EK + G + L S + VE+ P GV+GAI P I
Sbjct: 64 AKNHLAAEK-----TPGTEDLTTTAWSGDNGL----TLVEYAPFGVIGAITPSTNPTETI 114
Query: 206 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 261
N MLAA GN +V A + +I A+A G P+NLV + ET
Sbjct: 115 INNSISMLAA---GNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIET 171
Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
L++ ++ ++ G P V + + + K
Sbjct: 172 TNELMAHPDINLLVVTGGPAVVKAALSSGKK 202
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
A VD+ VA A+ AQ+ + + S R++ + + + ++ H E + E++ +TG V+ +
Sbjct: 36 ASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI 95
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
+ + EK + G + L E + + +E+ P GV+GA+ P I
Sbjct: 96 AKNVAAAEK-----TPGVEDLTTEALTGDNGL----TLIEYAPFGVIGAVTPSTNPTETI 146
Query: 206 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 261
N MLAA GN +V A ++ A+ A G PENLV + ET
Sbjct: 147 INNAISMLAA---GNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIET 203
Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
+ L+ + ++ G P V + M++ K
Sbjct: 204 AQRLMKHPGIALLVVTGGPAVVKAAMKSGKK 234
|
Length = 465 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 7e-10
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 54/303 (17%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
PLG V I WN+P IF +AA +GN ++ K +E RI+ A G
Sbjct: 768 PLGPVVCISPWNFPL-AIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA----G 822
Query: 247 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTL------TPVTL 297
P +V ++ G ET G ALV+ V ++F GS V R++ RN + L P+
Sbjct: 823 VPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIA 882
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
E GG++A IV V + +A S+GQ C+ + D+ + K+++
Sbjct: 883 ETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDV----ADRTLKMLR 938
Query: 358 SVSAGPPLAGKYDMGAL--CLLEHSEKLQNLVNDALDKGAE------ILARGSFGH---- 405
GA+ C + + ++L + +D A+ I A + G
Sbjct: 939 --------------GAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQ 984
Query: 406 --LSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSR 458
Q + PPT+I ++ +L + E FGP++ ++++N ++ E+++ N S
Sbjct: 985 AARENSEDWQSGTFVPPTLI-ELDSFDEL-KREVFGPVLHVVRYNRNQLDELIEQINASG 1042
Query: 459 YGL 461
YGL
Sbjct: 1043 YGL 1045
|
Length = 1318 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 8e-09
Identities = 97/428 (22%), Positives = 165/428 (38%), Gaps = 56/428 (13%)
Query: 88 VDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL- 145
VA AR K +F +R L+ L KY++E +E + +S+ TG T D+ +
Sbjct: 38 FAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYALSAA-TGATRRDSWID 96
Query: 146 --GEIMT--TCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPL----GVVGA 194
G I T + +L E S + + + H L GV
Sbjct: 97 IDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQ------HILTPRRGVAVH 150
Query: 195 IVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA---- 247
I ++N+P + F P L A G +++K + ++ + +A + +
Sbjct: 151 INAFNFPVWGMLEKFAPALLA---GVPVIVKPATATAY-------LTEAVVKDIVESGLL 200
Query: 248 PENLVDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKD 303
PE + +I G G+ L + D + F GS + + + E +
Sbjct: 201 PEGALQLICG--SVGDLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLN 258
Query: 304 AFIVCDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVK 357
A I+ D P R +GQ C R +V A+ + A++ K
Sbjct: 259 AAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAK 318
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---Y 414
V P L G MG L E E ++ V L AE++ G GA + +
Sbjct: 319 VVVGDPRLEGV-RMGPLVSREQREDVRAAV-ATLLAEAEVVFGGPDRFEVVGADAEKGAF 376
Query: 415 FPPTVIV--NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
FPPT+++ + + + EAFGP+ +M +++ E ++LA R L +V +
Sbjct: 377 FPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAF 436
Query: 473 AREIAAQI 480
ARE+
Sbjct: 437 ARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 27/275 (9%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P G V I +N+P ++ A+F GN ++KV S + R+ L G
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRL----LHLCGM 197
Query: 248 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
P VD+I T ++ + +F GS V R A + V LE G D
Sbjct: 198 PATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAE---RLALELHGKVKLEDAGFDWK 254
Query: 306 IVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKI-----VKS 358
I+ DV DV +VA + A SGQ C+ + H + + A + ++ + ++
Sbjct: 255 ILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS----FGHLSEGAVDQY 414
++ GP L + +L+H +KL + + G + L S +G AV
Sbjct: 315 LTIGPVLT--WTTER--ILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAV--- 367
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 449
F P + + +L+ E FGP + ++ ++
Sbjct: 368 FVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 96/420 (22%), Positives = 145/420 (34%), Gaps = 100/420 (23%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G 146
VD A A A + + S +R FL + I + + + +TG + +A L G
Sbjct: 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETG--LPEARLQG 58
Query: 147 EIMTTCEKITW---LLSEGEKWL-----------KPEYRSSGRSMIHKKAKVEFHPLGVV 192
E+ T ++ L+ EG WL +P R R M PLG V
Sbjct: 59 ELGRTTGQLRLFADLVREGS-WLDARIDPADPDRQPLPRPDLRRM--------LVPLGPV 109
Query: 193 GAIVSWNYPFHNIFNPM-------LAAVFSGNGIVIK-------VSENASWSGCFYFRII 238
+ N+P F+ LAA G +V+K SE R I
Sbjct: 110 AVFGASNFPL--AFSVAGGDTASALAA---GCPVVVKAHPAHPGTSE-------LVARAI 157
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSSVDKII----FVGSPGVGRMIMRNASKTLT 293
+AAL A G P + ++ G E G ALV I F GS GR + A+
Sbjct: 158 RAALRATGLPAGVFSLLQGGGREVGVALVK--HPAIKAVGFTGSRRGGRALFDAAAARPE 215
Query: 294 --PVTLELGGKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNC---------AGAERFY 339
P ELG + + IA V + +GQ C AG
Sbjct: 216 PIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPA--- 272
Query: 340 VHRDIYALFVSQVAKIVKSVSAG----PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395
F++ +A+ + + A P +A Y G L G
Sbjct: 273 -----GDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAA-------------PGV 314
Query: 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 455
+LA G+ A F + +QEE FGP +++++ E++ +A
Sbjct: 315 RVLAGGAAAEGGNQAAPTLFKVDAAAFLADP--ALQEEVFGPASLVVRYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 75/392 (19%), Positives = 152/392 (38%), Gaps = 22/392 (5%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + +++ +I++ ++G T D+++ G I T + G
Sbjct: 61 TYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALG 120
Query: 163 EKWLKP--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220
+ L E G+ + V GV I ++N+P ++ A+ +G ++
Sbjct: 121 DARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVI 180
Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGV 280
+K + +W R+++ +AA P + V+ G + + D + F GS
Sbjct: 181 VKPATATAW---LTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVVSFTGSAET 237
Query: 281 GRMIMRNAS--KTLTPVTLELGGKDAFIVCDDVDVPHVAQIA------VRAALQSSGQNC 332
++ + + + V +E ++ ++ D P VR SGQ C
Sbjct: 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPD-AAPGSEAFDLFVKEVVREMTVKSGQKC 296
Query: 333 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
R +V +Y +A + + G P MG L ++ + AL
Sbjct: 297 TAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGL-AALR 355
Query: 393 KGAEILARGSFGHL--SEGAVDQYFPPTVIV--NVNHTMKLMQEEAFGPIMPIMKFNTDE 448
AE+L G L ++ AV PT++ + + + E FGP+ ++ +
Sbjct: 356 AQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAA 415
Query: 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+ LA + L +V+S A ++
Sbjct: 416 HALALARRGQGSLVASVYSDDAAFLAAAALEL 447
|
Length = 521 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 31/270 (11%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD----- 142
+D+ VA A+ AQ+ + S + R + + + + +++ +TG V+
Sbjct: 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIK 60
Query: 143 ---ASLGEIMTTC-EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198
A+ EK +L+ E + P+GVV +I
Sbjct: 61 NHFAAEYIYNVYKDEKTCGVLTGDENGG---------------TLIIAEPIGVVASITPS 105
Query: 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
P + L ++ + N I+ A ++ A A GAPENL+ I
Sbjct: 106 TNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP 165
Query: 259 A-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315
+ E + L+ + ++ G P V ++ A + P G ++ + D+
Sbjct: 166 SIELAQRLMKFPGIGLLLATGGPAV----VKAAYSSGKPAIGVGAGNTPVVIDETADIKR 221
Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
Q V++ +G CA + V +Y
Sbjct: 222 AVQSIVKSKTFDNGVICASEQSVIVVDSVY 251
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 6e-05
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 188 PLGVVGAIVSWNYPFHN-----IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV+ A++ P N IF ++A + + N I+ A +I++ A
Sbjct: 95 PVGVIAALI----PSTNPTSTAIFKALIA-LKTRNAIIFSPHPRAKKCSIEAAKIMREAA 149
Query: 243 AAVGAPENLVDVIT 256
A GAPE L+ I
Sbjct: 150 VAAGAPEGLIQWIE 163
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 4e-04
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
W KP+ ++ + K + P G+ I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKNDPLKL---KKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPH 229
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE----ALVSSVDKIIFVGSPGV 280
A ++ + L G NLV + A +V I F GS
Sbjct: 230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFY 339
G+ + +NA + V E G + I+ D + + +A +L SGQ C +
Sbjct: 290 GQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAIL 346
Query: 340 VHRD 343
V RD
Sbjct: 347 VPRD 350
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388
GQ C R V R + + + + V G P MGAL LE E ++ V
Sbjct: 293 GQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKV- 351
Query: 389 DALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVN-------HTMKLMQEEAFGPI 438
AL AEI+ G GA + +FPPT++ + H + EAFGP+
Sbjct: 352 AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDV-----EAFGPV 406
Query: 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486
+M ++ +E ++LA + L ++ + E+A ++ G A
Sbjct: 407 STLMPYDDLDEAIELAARGKGSLVASLVTAD----PEVARELVLGAAP 450
|
Length = 675 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 83/373 (22%), Positives = 137/373 (36%), Gaps = 73/373 (19%)
Query: 165 WLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222
W KP+ + +M + F P GV I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKHDPLAM-----EKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVK 227
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-------SVDKIIFV 275
A ++ + LA G NLV + A+T E ++ V I F
Sbjct: 228 PHPAAILPLAITVQVAREVLAEAGFDPNLVTLA---ADTPEEPIAQTLATRPEVRIIDFT 284
Query: 276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 335
GS G + NA + V E G + +V D+ + + + SGQ C
Sbjct: 285 GSNAFGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTP 342
Query: 336 ERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
+ YV RD + + +A + + A P A +GA +Q+
Sbjct: 343 QNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAAL-LGA---------IQS- 391
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ----------EEAFG 436
D L + AE G SE FP + T L++ EE FG
Sbjct: 392 -PDTLARIAEARQLGEVLLASEAVAHPEFPDARV----RTPLLLKLDASDEAAYAEERFG 446
Query: 437 PIMPIMKFNTDEEVVKLANDS---RYGLGCAVFSGS-------QHRAREIAAQIQC---- 482
PI ++ ++ + ++LA +S + V+S Q A + +
Sbjct: 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG 506
Query: 483 GV-----AAINDF 490
GV AA +DF
Sbjct: 507 GVFVNQSAAFSDF 519
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 535 | |||
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.94 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.69 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.53 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.26 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.19 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.07 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.66 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 96.01 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 95.91 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 95.87 | |
| PLN02926 | 431 | histidinol dehydrogenase | 95.71 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 95.61 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 95.47 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 94.44 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 93.66 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 90.52 |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-123 Score=901.53 Aligned_cols=512 Identities=65% Similarity=1.057 Sum_probs=487.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhCCCCCCcee-------eeCCCC--CCCCCCCCCCcccccCCcccCCCCCCeEEeecC
Q 009397 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSID-------VDASDV--LDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEP 71 (535)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~P 71 (535)
|-+||.+.+++++|+||+.++...+...++++ .+-|+. ++|.+.+ .+-+.+++.++++||+|
T Consensus 1 ~~~~~~~~~~a~~~~i~~~~~~l~~p~~~s~~~~~~~~~~~~~~~~~n~~~~~~---------~~~~~~~~~~~vqCycP 71 (583)
T KOG2454|consen 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIP---------PRGRSQQSDKKVQCYCP 71 (583)
T ss_pred CCchhHHHHHHHHHHHHHHHHhhcCCCCCccccCHHHhccCCCchhhcCeeecC---------CCCCCcCCCCceEEecC
Confidence 45899999999999999988666665444444 444443 4454444 34456778899999999
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHH
Q 009397 72 ATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 151 (535)
Q Consensus 72 ~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~ 151 (535)
+||+.+|.+|..++.|||+.|..|++||++|.++++..|+++|+.+.++|.+|+|.++++.|+||||++.||++|||..+
T Consensus 72 atg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvT 151 (583)
T KOG2454|consen 72 ATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVT 151 (583)
T ss_pred CCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHH
Q 009397 152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231 (535)
Q Consensus 152 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~ 231 (535)
+|++.|++.+++++++|+.||.++.+.++..+++|+|+||+++|+|||||+||+++++++||++||++|+|.||++.|++
T Consensus 152 lEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~ 231 (583)
T KOG2454|consen 152 LEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSG 231 (583)
T ss_pred HHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 232 ~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
..+.++++.+|..+|.|+++||+++|.++.+++|++ .++|++|+||.++++.|++.++++++||++||||||++||++
T Consensus 232 ~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~d 311 (583)
T KOG2454|consen 232 CFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICD 311 (583)
T ss_pred hhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEec
Confidence 999999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~ 389 (535)
|+|++..++.++||.|+++||+|++++|+|||.++||.|+..|.++++.+|.|.|+..+.|||+|++.++++.++.+|+|
T Consensus 312 da~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~D 391 (583)
T KOG2454|consen 312 DADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVND 391 (583)
T ss_pred cccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCC
Q 009397 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (535)
Q Consensus 390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d 469 (535)
|+++||+++.||.|+.||.++.|+||+||+|.|++++|.|++||.||||++||++++.|++|+++|+++|||++|||+.|
T Consensus 392 Av~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~d 471 (583)
T KOG2454|consen 392 AVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGD 471 (583)
T ss_pred HHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcceEEECCCCccccCC-CC----CCCCCCcCcHHHhhccCceeeee
Q 009397 470 QHRAREIAAQIQCGVAAINDFASNYMCQ-VF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 470 ~~~~~~~a~~l~~G~v~IN~~~~~~~~~-~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
.++++++++++++|+|.||||+++|++| || .||||||+|.|||+ ..-+.|++
T Consensus 472 k~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLr-g~Cn~Ksv 528 (583)
T KOG2454|consen 472 KHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLR-GCCNVKSV 528 (583)
T ss_pred HHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHH-HHhcccce
Confidence 9999999999999999999999999999 33 89999999999997 46666776
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-99 Score=771.65 Aligned_cols=462 Identities=28% Similarity=0.439 Sum_probs=435.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
+++||+|+|.++.++++++++||+||+++++|+.++.+|++.+|++|++||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 6899999999999999999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
.|+...+.|.|||+.+++..++..+++.+|+++..+++.-. +..+++ ...-.+++++|+|||+.|.|||||+....
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~-~~~~~~---~~~~~yt~~eP~GV~G~I~pWN~Pllm~a 176 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHG-STIPTD---GEFFAYTRREPIGVCGQIIPWNFPLLMQA 176 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhccc-ccCCCC---CceEEEecCCcceeeeEeccCchHHHHHH
Confidence 99999999999999999779999999999999998877622 111211 22457889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
|+++|||++||+||+||++++|+|+..+++++ +++|+|+|++|+|+|.+ +.+.+|.+ +|+.|.||||+++|+.
T Consensus 177 wKlaPALa~GNtvV~Kpae~tplsal~~~~l~----~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~ 252 (501)
T KOG2450|consen 177 WKLAPALAAGNTVVLKPAEQTPLTALYLASLC----KEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKE 252 (501)
T ss_pred HhhhhHHhhCcEEEecCCCCCCchHHHHHHHh----HHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhH
Confidence 99999999999999999999999999888774 56999999999999966 78899998 9999999999999999
Q ss_pred HHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc-ccC
Q 009397 284 IMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (535)
Q Consensus 284 v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (535)
|+++++ .++|||++|||||+|.||++|+|++.|++.++++.|+|+||.|++.+|+|||+++||+|++.++++.++ +++
T Consensus 253 I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kv 332 (501)
T KOG2450|consen 253 IMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKV 332 (501)
T ss_pred HhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhccccc
Confidence 999888 459999999999999999999999999999999999999999999999999999999999999999966 999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++.+.+||.+++.+++|+.++|+.++++||++++||.+ + ...|+|++|||+.+|+++|+|++||+||||++|
T Consensus 333 GdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~--~--g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v 408 (501)
T KOG2450|consen 333 GDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVR--L--GDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVV 408 (501)
T ss_pred CCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcc--c--CCCceEECCeeccCCChhhhhhHhhccCceEEE
Confidence 999999999999999999999999999999999999999987 2 378999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|++.||+|+++|+++|||++.|||+|.++++++++++++|+||||++..+...-|+ +||+||+.|.+|+ +.|+
T Consensus 409 ~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l-~~yt 487 (501)
T KOG2450|consen 409 LKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGL-EAYT 487 (501)
T ss_pred EecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHH-hhcc
Confidence 9999999999999999999999999999999999999999999999999877766666 9999999999999 6899
Q ss_pred eeeeec
Q 009397 518 KLKMLP 523 (535)
Q Consensus 518 ~~k~~~ 523 (535)
++|.+-
T Consensus 488 evKtv~ 493 (501)
T KOG2450|consen 488 EVKTVT 493 (501)
T ss_pred eeeEEE
Confidence 999983
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-98 Score=729.96 Aligned_cols=463 Identities=30% Similarity=0.465 Sum_probs=434.6
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..+-||+|+|+++.+.++|++.||++|+.|+.|+.++.+|.+.||++|.+||.+|+.++..+|.++|+++.++|.+|.|+
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|.|||+.|| .|||..+..+++|+++.+.+.......+.+ ...+..+.++|+||+++|+|||||......
T Consensus 103 La~iiTlE~GKpL~eA-~gEv~y~a~f~eWyAeEA~RvyGdii~s~~---~~rr~i~ikQPvGV~alItPWNFP~AMItR 178 (503)
T KOG2451|consen 103 LATIITLENGKPLGEA-KGEVAYSAAFFEWYAEEARRVYGDIIPSLN---PNRRLIVIKQPVGVVALITPWNFPAAMITR 178 (503)
T ss_pred HHHHHhhhcCCchhhc-cceeehhHHHHHHHHHHhhhhhccccCCCC---CCceEEEEeccceeEEEecCcCChHHHHHh
Confidence 9999999999999999 599999999999999999987765443322 345677889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc----cchhhhhc--cccEEEEeCChHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA----ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~----~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
+..+||++||+||+|||+.+|+++..++++.. ++|+|+|++|+++++. +.++.|+. .|+.|+||||+.+|
T Consensus 179 K~gAALAaGCTvVvkPs~~TPlsaLala~lA~----~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VG 254 (503)
T KOG2451|consen 179 KAGAALAAGCTVVVKPSEDTPLSALALAKLAE----EAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVG 254 (503)
T ss_pred HHHHHHhcCceEEEccCCCCchHHHHHHHHHH----HcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHH
Confidence 99999999999999999999999999888865 5999999999999742 67888888 99999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.++++++.+.|++.+||||+.|+||++|+|||.|++..+..+|.++||.|.+..|+|||+++||+|+++|.++++++++
T Consensus 255 KiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~v 334 (503)
T KOG2451|consen 255 KILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKV 334 (503)
T ss_pred HHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+.+++++..||+|++.+.++++.+++||+++||++++||++.. ...++|++|||+.+|+++|-+.+||+|||+.+|
T Consensus 335 GdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~---~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v 411 (503)
T KOG2451|consen 335 GDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERS---ELGPTFYEPTVLSNVTQNMLVSSEETFGPLASV 411 (503)
T ss_pred cCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEcc---ccCCccccceEeecCCccceeecccccccccee
Confidence 99999999999999999999999999999999999999999432 134589999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|.||+|+++|+++.||++++||+|..+.-+++++|+.|||-+|--.+....-|| +||+||+|+.+|+ ++|+
T Consensus 412 ~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGi-dey~ 490 (503)
T KOG2451|consen 412 FKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGI-DEYL 490 (503)
T ss_pred eeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccch-hhhh
Confidence 9999999999999999999999999999999999999999999999986665555556 9999999999999 6899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
.+|.+
T Consensus 491 ~ik~i 495 (503)
T KOG2451|consen 491 VIKYI 495 (503)
T ss_pred hhhee
Confidence 99987
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-97 Score=792.45 Aligned_cols=465 Identities=27% Similarity=0.458 Sum_probs=427.9
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
++...++||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|+.+|.++|+++++.|+++
T Consensus 7 ~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~ 86 (482)
T PRK11241 7 TLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEH 86 (482)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 33445689999998876788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..+++ +|+..+++.++|++..+++..... .+.. ......+++++|+|||++|+|||||+..
T Consensus 87 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 162 (482)
T PRK11241 87 QDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT-IPGH--QADKRLIVIKQPIGVTAAITPWNFPAAM 162 (482)
T ss_pred HHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEEeeceEEEEECCCcChHHH
Confidence 99999999999999999995 899999999999998776543221 1111 1123457899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|++ +.++.|++ +++.|+||||+++|
T Consensus 163 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G 238 (482)
T PRK11241 163 ITRKAGPALAAGCTMVLKPASQTPFSALALAEL----AIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIG 238 (482)
T ss_pred HHHHHHHHHHhCCEEEEECCCCChHHHHHHHHH----HHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHH
Confidence 999999999999999999999999999877665 566999999999999865 67888887 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
++|++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 239 ~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~ 318 (482)
T PRK11241 239 RQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHI 318 (482)
T ss_pred HHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++|+++||++++||.+. ...|+|++|||+.+++++|++++||+||||++|
T Consensus 319 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v 394 (482)
T PRK11241 319 GDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLAPL 394 (482)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEE
Confidence 9999999999999999999999999999999999999999742 136899999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+........|| .||+|+++|.+|+ ++|+
T Consensus 395 ~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~-~~ft 473 (482)
T PRK11241 395 FRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGI-EDYL 473 (482)
T ss_pred EEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999987554434456 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 474 ~~k~v 478 (482)
T PRK11241 474 EIKYM 478 (482)
T ss_pred cceEE
Confidence 99986
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-96 Score=796.81 Aligned_cols=465 Identities=20% Similarity=0.302 Sum_probs=427.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
...+||+|+|+.+.+++.++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45578999999876778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||++.++. +||..+++.++|+++.+++..+... +.. ..+...+++++|+|||++|+|||||+...++
T Consensus 193 la~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~-~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~ 268 (604)
T PLN02419 193 LAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYL-PNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLW 268 (604)
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccc--CCCccceEEecCccEEEEECCCccHHHHHHH
Confidence 99999999999999995 7999999999999988876654321 111 1233467889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
++++||++||+||+|||+.+|+++.+++++ +.++|+|+|++|+|+|+.+.++.|+. +|++|+||||+.+|+.|+
T Consensus 269 ~iapALaAGNtVVlKPSe~tp~ta~~l~~l----~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~ 344 (604)
T PLN02419 269 MFPVAVTCGNTFILKPSEKDPGASVILAEL----AMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIY 344 (604)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHH----HHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHH
Confidence 999999999999999999999999877666 56699999999999997777888886 999999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||++ +|+|+++|.++++++++|+|.
T Consensus 345 ~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~ 423 (604)
T PLN02419 345 ARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGS 423 (604)
T ss_pred HHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++|||+++.++++++++|++|+++||++++||.+...+....|+|++|||+.++++||.+++||+||||++|++|+
T Consensus 424 d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~ 503 (604)
T PLN02419 424 EPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQAN 503 (604)
T ss_pred CCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecC
Confidence 99999999999999999999999999999999999985433333569999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC--CcCcHHHhhccCce
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD--EFDSVHVILNDPTK 518 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G--~~~g~~gl~~~~~~ 518 (535)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+..... ...|| .||+| +++|.+|+ ++|++
T Consensus 504 ~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl-~~ft~ 582 (604)
T PLN02419 504 SFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGV-DFFTQ 582 (604)
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHH-HHhhC
Confidence 9999999999999999999999999999999999999999999863221 22345 99999 89999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|.+
T Consensus 583 ~K~v 586 (604)
T PLN02419 583 IKLV 586 (604)
T ss_pred eEEE
Confidence 9997
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-96 Score=780.30 Aligned_cols=454 Identities=32% Similarity=0.535 Sum_probs=423.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
++||+|+|+...+ +++++||+||+.+++++.++.+|+++|+++|++|++.|+++|..+|.++|++++++|++|+++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6799999998865 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||++.+++ +|+..+++.++|+++.+++..... .+... .....++++|+|||++|+|||||++..++++
T Consensus 80 ~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ 154 (472)
T COG1012 80 ALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGET-IPTDK---GSKALVRREPLGVVGAITPWNFPLALAAWKL 154 (472)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-cCCCC---CcceEEEeecceEEEEECCCCCHHHHHHhhH
Confidence 999999999999995 779999999999999988765544 33221 4678899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+ +.++.|+. +|++|+||||+++|+.|++
T Consensus 155 apALaaGntVV~KPse~tp~sa~~l~~~~----~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~ 230 (472)
T COG1012 155 APALAAGNTVVLKPSEQTPLSALALAELA----AEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAA 230 (472)
T ss_pred HHHHHcCCEEEEECcccCcHHHHHHHHHH----HHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHH
Confidence 99999999999999999999988777764 45889999999999965 57888988 8999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc-ccCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPL 365 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~-l~~G~~~ 365 (535)
.+++++||+++|||||||+||++|||++.|++.+++|+|+|+||.|++.+|+|||+++||+|+++|.++ ++ +++|++.
T Consensus 231 ~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~ 309 (472)
T COG1012 231 AAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPL 309 (472)
T ss_pred HHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 65 9999988
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
|+.+++|||+++.++++++++|++++++|+++++||++ + . |+|++|||+.+++++|++++||+||||++|++|+
T Consensus 310 d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~---~--~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~ 383 (472)
T COG1012 310 DPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR---P--G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFK 383 (472)
T ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC---C--C-CeEECCEEEecCCCCChhhhccccCCceEEEEeC
Confidence 99999999999999999999999999999999999982 1 2 9999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCcee
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~ 519 (535)
|+||||+++|+++|||+++|||+|..++.++++++++|+|+||++.... ...|| .||+|+++|.+|+ ++|++.
T Consensus 384 ~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~-~~~~~~ 462 (472)
T COG1012 384 DEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGL-EEFTEV 462 (472)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHH-HHHhcc
Confidence 9999999999999999999999999999999999999999999985322 23456 9999999999999 589999
Q ss_pred eee
Q 009397 520 KML 522 (535)
Q Consensus 520 k~~ 522 (535)
|++
T Consensus 463 k~v 465 (472)
T COG1012 463 KTV 465 (472)
T ss_pred eEE
Confidence 987
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-94 Score=775.65 Aligned_cols=465 Identities=27% Similarity=0.442 Sum_probs=428.5
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
..+++||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|+++
T Consensus 19 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 98 (501)
T PLN02766 19 KFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEH 98 (501)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 345679999999877778999999999999999999999999999999999997 599999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..+++..|+..+++.++|++...+++... ..+.. .....+++++|+|||++|+|||||+..
T Consensus 99 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~ 174 (501)
T PLN02766 99 IEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGE-TLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTM 174 (501)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eeccC---CCceEEEEeccceEEEEECCCCChHHH
Confidence 99999999999999999986679999999999999887665332 11111 123457889999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|+. +.++.|+. ++++|.||||+.+|
T Consensus 175 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G 250 (501)
T PLN02766 175 FFMKVAPALAAGCTMVVKPAEQTPLSALFYAHL----AKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVG 250 (501)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHH----HHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence 999999999999999999999999999877666 567999999999999965 67888887 89999999999999
Q ss_pred HHHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.++ ++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 251 ~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~ 330 (501)
T PLN02766 251 RKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWV 330 (501)
T ss_pred HHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999998 69999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++|||+++.++++++++|++++++|+++++||.+. ...|+|++|||+.+++++|++++||+||||++
T Consensus 331 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 406 (501)
T PLN02766 331 VGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMS 406 (501)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceEE
Confidence 99999999999999999999999999999999999999999742 24689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+........|| .||+|+++|++|+ ++|
T Consensus 407 v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~f 485 (501)
T PLN02766 407 LMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDAL-DKY 485 (501)
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHH-HHH
Confidence 99999999999999999999999999999999999999999999999997655555566 9999999999999 589
Q ss_pred ceeeeecC
Q 009397 517 TKLKMLPH 524 (535)
Q Consensus 517 ~~~k~~~~ 524 (535)
++.|.+-.
T Consensus 486 t~~k~v~~ 493 (501)
T PLN02766 486 LQVKSVVT 493 (501)
T ss_pred hceEEEEE
Confidence 99999843
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=770.49 Aligned_cols=469 Identities=26% Similarity=0.432 Sum_probs=431.7
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
++..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|+++
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 45567889999999877788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..+++..|+..+++.++|+++..+..... ..+.. ......++++|+|||++|+|||||+..
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~PlGVv~~I~p~N~P~~~ 158 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGE-QIPLR---GGSFVYTRREPLGVCAGIGAWNYPIQI 158 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eeccC---CCceEEEEEeeeeEEEEECCCchHHHH
Confidence 99999999999999999997679999999999999877653221 11110 123457889999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
.++++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|+.+.++.|+. .+|.|+||||+.+|+
T Consensus 159 ~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~----~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~ 234 (488)
T PRK13252 159 ACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIY----TEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGK 234 (488)
T ss_pred HHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHH----HHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 9999999999999999999999999998877764 5699999999999987777888887 799999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|.++++++++|
T Consensus 235 ~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (488)
T PRK13252 235 KVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG 314 (488)
T ss_pred HHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++|||++++++++++++|++++++|+++++||.+...+....|+|++|||+.+++++|++++||+||||++|+
T Consensus 315 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 394 (488)
T PRK13252 315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVL 394 (488)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEE
Confidence 99999999999999999999999999999999999999975433333569999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|.+|||+++|+++|||+++|||+|.+++.++++++++|+|+||++.......|| .||+|+++|.+|+ ++|++
T Consensus 395 ~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~ft~ 473 (488)
T PRK13252 395 TFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATL-EHYTQ 473 (488)
T ss_pred eeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHH-HHhcc
Confidence 999999999999999999999999999999999999999999999997544334456 9999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|.+
T Consensus 474 ~k~i 477 (488)
T PRK13252 474 IKSV 477 (488)
T ss_pred eEEE
Confidence 9997
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=765.45 Aligned_cols=460 Identities=25% Similarity=0.392 Sum_probs=422.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+++||+|+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 457899999875 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+|||..++...|+..+++.++++++..+.... ...+.. ..+....++++|+|||++|+|||||+...+++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 157 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 157 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHH
Confidence 999999999999988657999999999999877654322 111110 12335678999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++..+++++. + ++|+|++|+|+|++ +.++.|+. ++++|.||||+++|+.|+
T Consensus 158 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~----~-~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 232 (472)
T TIGR03374 158 LAPALAAGNCVVLKPSEITPLTALKLAELAK----D-IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232 (472)
T ss_pred HHHHHhcCCEEEecCCCCCCHHHHHHHHHHH----H-hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999998888764 3 49999999999954 67888886 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~ 312 (472)
T TIGR03374 233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPD 312 (472)
T ss_pred HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcC-CcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~G-a~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
++++++|||++..++++++++|++++++| +++++||... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~ 388 (472)
T TIGR03374 313 DESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSF 388 (472)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEE
Confidence 99999999999999999999999999999 7999999742 235889999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|.||||+++|+++|||++||||+|.+++.++++++++|+|+||+........|| .||+|+++|++|| ++|++.|
T Consensus 389 ~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t~~k 467 (472)
T TIGR03374 389 DDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGL-EDYTVVR 467 (472)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHH-HHhhceE
Confidence 9999999999999999999999999999999999999999999997655444556 8999999999999 5899998
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
.+
T Consensus 468 ~i 469 (472)
T TIGR03374 468 HI 469 (472)
T ss_pred EE
Confidence 86
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=769.18 Aligned_cols=465 Identities=22% Similarity=0.339 Sum_probs=426.8
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
.+.+.+||+|+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++
T Consensus 18 ~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
T PLN02315 18 SRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKL 95 (508)
T ss_pred ccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHH
Confidence 355678999999854 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||++.++ .+|+..+++.++|+++.+++.... ..+.. ......+..++|+|||++|+|||||+..+
T Consensus 96 ~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 171 (508)
T PLN02315 96 DYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNGS-IIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVL 171 (508)
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecceEEEEECCCcchHHHH
Confidence 999999999999999999 489999999999999877654321 11111 01223456889999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
++++++||++||+||+|||+.+|+++.++.+++.++|.++|+|+|++|++++..+.++.|+. ++++|+||||+.+|+.
T Consensus 172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~ 251 (508)
T PLN02315 172 GWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLM 251 (508)
T ss_pred HHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985577888887 9999999999999999
Q ss_pred HHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCC
Q 009397 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 284 v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (535)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+
T Consensus 252 v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~ 331 (508)
T PLN02315 252 VQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331 (508)
T ss_pred HHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
|.++++++|||++..+++++++++++++++|+++++||.+.+ ..|+|++|||+ +++++|++++||+||||++|++
T Consensus 332 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~----~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~ 406 (508)
T PLN02315 332 PLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIE----SEGNFVQPTIV-EISPDADVVKEELFGPVLYVMK 406 (508)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC----CCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEE
Confidence 999999999999999999999999999999999999998532 36899999999 6999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHh--hcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccC
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA--QIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~--~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|+|+||||+++|+++|||+++|||+|.+.++++++ ++++|+|+||+..... ...|+ .||+|+++|.+|+ ++|
T Consensus 407 ~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~f 485 (508)
T PLN02315 407 FKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW-KQY 485 (508)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHH-HHH
Confidence 99999999999999999999999999999999985 7999999999854332 22345 9999999999999 578
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|.+
T Consensus 486 t~~k~v 491 (508)
T PLN02315 486 MRRSTC 491 (508)
T ss_pred hhEEEE
Confidence 999986
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=767.51 Aligned_cols=464 Identities=25% Similarity=0.418 Sum_probs=425.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.++||+|+|..+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4679999998877788999999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccc-ccccceeeeecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-IHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||+..++..+|+..+++.++|++...++..... .+..... ......++++|+|||++|+|||||+...
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~ 164 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKT-IPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMML 164 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEeeccceEEEEcCCchHHHHH
Confidence 9999999999999999865799999999999998776543221 1111000 1123568899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++..+.++ +.++|+|+|++|+|+|++ +.++.|+. ++++|+||||+.+|+
T Consensus 165 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 240 (486)
T cd07140 165 AWKMAACLAAGNTVVLKPAQVTPLTALKFAEL----TVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGK 240 (486)
T ss_pred HHHHHHHHHhCCEEEEECCccCcHHHHHHHHH----HHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 99999999999999999999999999876665 567999999999999965 56788887 799999999999999
Q ss_pred HHHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 283 MIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 283 ~v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
.|++.+++ ++||+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++
T Consensus 241 ~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~ 320 (486)
T cd07140 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKI 320 (486)
T ss_pred HHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCc
Confidence 99999996 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||++++++++++++|++|+++||++++||.+.. ..|+|++|||+.+++++|++++||+||||++|
T Consensus 321 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v 396 (486)
T cd07140 321 GDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVD----RPGFFFEPTVFTDVEDHMFIAKEESFGPIMII 396 (486)
T ss_pred cCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCeeECCEEEeCCCCCChhhhCCCCCCeEEE
Confidence 99999999999999999999999999999999999999997532 35899999999999999999999999999999
Q ss_pred eecC--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 442 MKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 442 ~~~~--~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
++|+ |++|||+++|+++|||++||||+|.++++++++++++|+|+||++.......|+ .||+|+++|.+|| ++
T Consensus 397 ~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~ 475 (486)
T cd07140 397 SKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEAL-NE 475 (486)
T ss_pred EEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHH-HH
Confidence 9998 699999999999999999999999999999999999999999997655555566 8999999999999 58
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|.+
T Consensus 476 ft~~k~v 482 (486)
T cd07140 476 YLKTKTV 482 (486)
T ss_pred hhcEEEE
Confidence 9999987
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-93 Score=771.61 Aligned_cols=474 Identities=27% Similarity=0.440 Sum_probs=433.8
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHH
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYII 122 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~ 122 (535)
+++.+++||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+
T Consensus 54 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 133 (538)
T PLN02466 54 QVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLE 133 (538)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHH
Confidence 45566789999999887788999999999999999999999999999999999997 4999999999999999999999
Q ss_pred HhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhh
Q 009397 123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202 (535)
Q Consensus 123 ~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~ 202 (535)
+|+++|++++++|+||+..++...|+..+++.++|++...++..... .+.. ......++++|+|||++|+|||||+
T Consensus 134 ~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~ 209 (538)
T PLN02466 134 KHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT-VPAD---GPHHVQTLHEPIGVAGQIIPWNFPL 209 (538)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceEEEEEecceEEEEECCCchHH
Confidence 99999999999999999999866799999999999988766543221 1111 1224578999999999999999999
Q ss_pred hhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChH
Q 009397 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 203 ~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~ 279 (535)
...++++++||++||+||+|||+.+|+++.++.++ |.++|+|+|+||+|+|.. +.++.|+. ++|+|.||||+.
T Consensus 210 ~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~l----l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~ 285 (538)
T PLN02466 210 LMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKL----LHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTD 285 (538)
T ss_pred HHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHH----HHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHH
Confidence 99999999999999999999999999999877766 566999999999999965 56788887 899999999999
Q ss_pred HHHHHHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc
Q 009397 280 VGRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (535)
Q Consensus 280 ~g~~v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~ 358 (535)
+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|++++.+
T Consensus 286 ~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 365 (538)
T PLN02466 286 TGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALK 365 (538)
T ss_pred HHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccce
Q 009397 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (535)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPv 438 (535)
+++|+|.++++++||+++++++++++++|++++++|+++++||.+. ...|+|++|||+.+++++|++++||+||||
T Consensus 366 ~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPV 441 (538)
T PLN02466 366 RVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPV 441 (538)
T ss_pred ccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcE
Confidence 9999999999999999999999999999999999999999999853 236889999999999999999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhc
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
++|++|+|.||||+++|+++|||+++|||+|.+++.++++++++|+|+||+........|| .||+|+++|.+|| +
T Consensus 442 l~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~ 520 (538)
T PLN02466 442 QSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSL-N 520 (538)
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHH-H
Confidence 9999999999999999999999999999999999999999999999999997665555566 9999999999999 5
Q ss_pred cCceeeeecCCCCCCCc
Q 009397 515 DPTKLKMLPHFSVPAIW 531 (535)
Q Consensus 515 ~~~~~k~~~~~~~~~~~ 531 (535)
+|++.|.+-.-...+.|
T Consensus 521 ~ft~~k~v~~~~~~~~~ 537 (538)
T PLN02466 521 NYLQVKAVVTPLKNPAW 537 (538)
T ss_pred HhcceEEEEEeCCCCCC
Confidence 89999998544555655
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-93 Score=766.31 Aligned_cols=462 Identities=28% Similarity=0.463 Sum_probs=426.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 24 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 103 (498)
T PLN02278 24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKED 103 (498)
T ss_pred cccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35689999998876778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++. .|+..+++.++|+++..++..+.. .+.. ..+....++++|+|||++|+|||||+...++
T Consensus 104 la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~ 179 (498)
T PLN02278 104 LAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDI-IPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITR 179 (498)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEeecccEEEEECCCccHHHHHHH
Confidence 99999999999999995 799999999999999887654321 1111 1223456788999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++..+.++ |.++|+|++++|+|+|+. +.++.|+. ++++|.||||+.+|+.|
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~----l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i 255 (498)
T PLN02278 180 KVGPALAAGCTVVVKPSELTPLTALAAAEL----ALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKL 255 (498)
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 999999999999999999999999876655 667999999999999966 56788887 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 256 ~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p 335 (498)
T PLN02278 256 MAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDG 335 (498)
T ss_pred HHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++||++++.++++++++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~ 411 (498)
T PLN02278 336 FEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHS----LGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRF 411 (498)
T ss_pred CCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCceEeeEEEecCCCCChhhhCCCcCCEEEEEee
Confidence 99999999999999999999999999999999999997421 25899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+|+++|.+|| ++|++.|
T Consensus 412 ~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~ft~~k 490 (498)
T PLN02278 412 KTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGI-DEYLEIK 490 (498)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHH-HHhheeE
Confidence 9999999999999999999999999999999999999999999996543333456 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 491 ~i 492 (498)
T PLN02278 491 YV 492 (498)
T ss_pred EE
Confidence 87
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-93 Score=765.51 Aligned_cols=464 Identities=28% Similarity=0.406 Sum_probs=423.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH-HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
++||+|+|..+.++++++++||+||+++++++.++.+|+++++++|++|++. |+++|..+|.++|+++++.|++++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 4689999988777788999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccc--ccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM--IHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
++++++|+||+..+++..|+..+++.++++++..++............+ ......++++|+|||++|+|||||+...+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 9999999999999986569999999999998776553321110100000 11345789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
+++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|+.+.++.|++ .+++|.||||+.+|+.|
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~----~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i 236 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAEL----AKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKI 236 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 9999999999999999999999999877665 56799999999999987667888887 79999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 237 ~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 237 GRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++|+++|+++++||.+.. ..|+|++|||+.+++++|+++++|+||||++|++|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 392 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALA----GEGYFVQPTLVLARSADSRLMREETFGPVVSFVPY 392 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEe
Confidence 99999999999999999999999999999999999997432 35899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+........|| .||+|+++|.+|| ++|++.|
T Consensus 393 ~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t~~k 471 (477)
T cd07113 393 EDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFI-DDYTELK 471 (477)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHH-HHhhceE
Confidence 9999999999999999999999999999999999999999999987544444456 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
.+
T Consensus 472 ~v 473 (477)
T cd07113 472 SV 473 (477)
T ss_pred EE
Confidence 87
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-93 Score=762.37 Aligned_cols=463 Identities=30% Similarity=0.456 Sum_probs=426.4
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
.+||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 57899999887777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+|||+.+++..|+..+++.++|+++...+.... ..+.. .....+++++|+|||++|+|||||+...++++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i 157 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS-ANMID---EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKL 157 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceeEEEEeecceEEEECCCccHHHHHHHHH
Confidence 999999999999997679999999999998776543221 11111 12346789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
++||++||+||+|||+.+|+++..+++++.+ ++|+|++|+|+|.. +.++.|+. +++.|+||||+.+|+.|++
T Consensus 158 ~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (475)
T cd07117 158 APALAAGNTVVIKPSSTTSLSLLELAKIIQD-----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAI 232 (475)
T ss_pred HHHHHcCCEEEEECCccCcHHHHHHHHHHHH-----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999988887654 39999999999854 67788888 7999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (535)
.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.++++++++|+|.+
T Consensus 233 ~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~ 312 (475)
T cd07117 233 AAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLD 312 (475)
T ss_pred HHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCC
Q 009397 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (535)
Q Consensus 367 ~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 446 (535)
+++++||++++.++++++++|++++++|+++++||.+...+..+.|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 392 (475)
T cd07117 313 PDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKT 392 (475)
T ss_pred CCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECC
Confidence 99999999999999999999999999999999999864332234689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 447 ~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
.||||+++|+++|||+++|||+|.+++.++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|++
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~ft~~k~v 471 (475)
T cd07117 393 EDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSML-DAYTQMKNI 471 (475)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHH-HHHhCeEEE
Confidence 99999999999999999999999999999999999999999997554444456 8999999999999 589999987
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-93 Score=763.49 Aligned_cols=463 Identities=29% Similarity=0.434 Sum_probs=427.8
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
++||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999887778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||++.++...|+..+++.++++++......... .+. ..+....++++|+|||++|+|||||+...++++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i 157 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL-SEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKL 157 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 9999999999999976799999999999988766532211 111 123346788999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
++||++||+||+|||+.+|+++..+++++++ + +|+|++|+|+|.+ +.++.|++ ++++|+||||+.+|++|++
T Consensus 158 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~ 232 (480)
T cd07559 158 APALAAGNTVVLKPASQTPLSILVLMELIGD----L-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQ 232 (480)
T ss_pred HHHHHcCCEEEEECchhhhHHHHHHHHHHHH----h-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999988887654 3 9999999999965 67888887 8999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCC-----CHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~da-----Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
.++++++|+++|+|||||+||++|+ |++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++
T Consensus 233 ~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 312 (480)
T cd07559 233 YAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKV 312 (480)
T ss_pred HHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|+++++++|||++++++++++++|++|+++||++++||.+...+....|+|++|||+.++++||+++++|+||||++|
T Consensus 313 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 392 (480)
T cd07559 313 GNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAV 392 (480)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEE
Confidence 99999999999999999999999999999999999999998654333357999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|.+|||+++|+++|||+++|||+|.+++.++++++++|+|+||++.......|| .||+|+++|.+|+ ++|+
T Consensus 393 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~~~ 471 (480)
T cd07559 393 ITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMML-DHYQ 471 (480)
T ss_pred EeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999987655444556 8999999999999 6899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 472 ~~k~v 476 (480)
T cd07559 472 QTKNI 476 (480)
T ss_pred ceEEE
Confidence 99986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-92 Score=761.28 Aligned_cols=469 Identities=30% Similarity=0.452 Sum_probs=429.2
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHh-----HHHhhcCHHHHHHHHHHHHHHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKSSFKQRRQFLRILLKYI 121 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~-----~~W~~~~~~~R~~iL~~la~~l 121 (535)
.++++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|| +.|+++|..+|.++|+++++.|
T Consensus 6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l 85 (503)
T PLN02467 6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKI 85 (503)
T ss_pred CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHH
Confidence 34578999999887777899999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchh
Q 009397 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (535)
Q Consensus 122 ~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P 201 (535)
++++++|++++++|+||+..++. .|+..+++.++|+++.+++.......+..........+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T PLN02467 86 TERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYP 164 (503)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChH
Confidence 99999999999999999999996 79999999999999888765432211111101123467899999999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCCh
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSP 278 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~ 278 (535)
+...++++++||++||+||+|||+.+|+++..++++ |.++|+|+|++|+|+|++ +.++.|+. .++.|.||||+
T Consensus 165 ~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~----~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~ 240 (503)
T PLN02467 165 LLMATWKVAPALAAGCTAVLKPSELASVTCLELADI----CREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGST 240 (503)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHH----HHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCH
Confidence 999999999999999999999999999999877766 567999999999999965 67788887 89999999999
Q ss_pred HHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc
Q 009397 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (535)
Q Consensus 279 ~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~ 358 (535)
.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||++++|+|+++|.+++++
T Consensus 241 ~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 320 (503)
T PLN02467 241 ATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN 320 (503)
T ss_pred HHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccce
Q 009397 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (535)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPv 438 (535)
+++|+|.++++++|||+++.++++++++|++++++|+++++||.+... ...|+|++|||+.+++++|++++||+||||
T Consensus 321 l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPv 398 (503)
T PLN02467 321 IKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEH--LKKGFFIEPTIITDVTTSMQIWREEVFGPV 398 (503)
T ss_pred cCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC--CCCCeEEeeEEEeCCCCCChHhhCCCCCce
Confidence 999999999999999999999999999999999999999999975321 246899999999999999999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhc
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+........|+ .||+|+++|.+|+ +
T Consensus 399 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~ 477 (503)
T PLN02467 399 LCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGL-E 477 (503)
T ss_pred EEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHH-H
Confidence 9999999999999999999999999999999999999999999999999987544434455 8999999999999 5
Q ss_pred cCceeeeec
Q 009397 515 DPTKLKMLP 523 (535)
Q Consensus 515 ~~~~~k~~~ 523 (535)
+|++.|++-
T Consensus 478 ~ft~~k~i~ 486 (503)
T PLN02467 478 NYLSVKQVT 486 (503)
T ss_pred HhhCeEEEE
Confidence 899999983
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-92 Score=759.87 Aligned_cols=464 Identities=26% Similarity=0.367 Sum_probs=429.6
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~ 130 (535)
+||+|+|+.+. +..++++||+||+++++++.++.+|+++++++|++|+..|+++|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999998775 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHH
Q 009397 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (535)
Q Consensus 131 ~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~ 210 (535)
++++|+||+..+++ +|+..+++.++|++...++..... .+.. ..+...+++++|+|||++|+|||||+...+++++
T Consensus 80 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~ 155 (478)
T cd07086 80 LVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLT-IPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAA 155 (478)
T ss_pred HHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 99999999999985 799999999999998877643321 1111 1123457889999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHH
Q 009397 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (535)
Q Consensus 211 ~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~a 288 (535)
+||++||+||+|||+.+|+++..++++++++|.++|+|+|++|+|+++.+.++.|.. ++|.|.||||+.+|+.|++.+
T Consensus 156 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 156 IALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997777788887 699999999999999999999
Q ss_pred hccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCC
Q 009397 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368 (535)
Q Consensus 289 a~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (535)
+++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 236 a~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 236 ARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred hccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHH
Q 009397 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (535)
Q Consensus 369 ~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 448 (535)
+++|||+++.++++++++|++|+++|+++++||++... ...|+|++|||+.+++++|++++||+||||++|++|+|.|
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~d 393 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG--GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLE 393 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHH
Confidence 99999999999999999999999999999999985421 1368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhh--cCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeee
Q 009397 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 449 eai~~~n~~~~gL~asvfs~d~~~~~~~a~~--l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
|||+++|+++|||+++|||+|.+++++++++ +++|+|+||+..... ...|| .||+|+++|.+|+ ++|++.|+
T Consensus 394 eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~-~~f~~~k~ 472 (478)
T cd07086 394 EAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAW-KQYMRRST 472 (478)
T ss_pred HHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHH-HHhhceEE
Confidence 9999999999999999999999999999999 999999999975432 22345 8999999999999 58999998
Q ss_pred e
Q 009397 522 L 522 (535)
Q Consensus 522 ~ 522 (535)
+
T Consensus 473 i 473 (478)
T cd07086 473 C 473 (478)
T ss_pred E
Confidence 7
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-92 Score=756.92 Aligned_cols=459 Identities=23% Similarity=0.340 Sum_probs=422.6
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009397 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 131 (535)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~ 131 (535)
+|+|+|+.+ ++.++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999874 478999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHH
Q 009397 132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (535)
Q Consensus 132 ~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~ 211 (535)
+++|+||+..++. +|+..+++.++|+++..+..... ..+.. ..+...+++++|+|||++|+|||||+...++++++
T Consensus 80 ~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 155 (474)
T cd07130 80 VSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGL-TIPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI 155 (474)
T ss_pred HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCc-cccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhH
Confidence 9999999999994 89999999999998765543221 11111 12234577899999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHh
Q 009397 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289 (535)
Q Consensus 212 AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa 289 (535)
||++||+||+|||+.+|+++.++.+++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|++.++
T Consensus 156 ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 156 ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997777888887 9999999999999999999999
Q ss_pred ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCC
Q 009397 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369 (535)
Q Consensus 290 ~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 369 (535)
++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 236 ~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~ 315 (474)
T cd07130 236 ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGT 315 (474)
T ss_pred hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHH
Q 009397 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 449 (535)
Q Consensus 370 ~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~e 449 (535)
++|||+++.++++++++|++|+++|+++++||.+.+ ..|+|++|||+.++++ |++++||+||||++|++|+|++|
T Consensus 316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~e 390 (474)
T cd07130 316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVID----GPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEE 390 (474)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC----CCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHH
Confidence 999999999999999999999999999999998532 3589999999998776 99999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhh--cCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 450 VVKLANDSRYGLGCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 450 ai~~~n~~~~gL~asvfs~d~~~~~~~a~~--l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+++|+++|||+++|||+|.+++++++++ +++|+|+||+..... ...|| .||+|+++|++|+ ++|++.|.+
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~-~~f~~~k~~ 469 (474)
T cd07130 391 AIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAW-KQYMRRSTC 469 (474)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHH-HHHhheEEE
Confidence 999999999999999999999999999987 999999999854332 23356 9999999999999 578888875
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-92 Score=758.51 Aligned_cols=461 Identities=28% Similarity=0.462 Sum_probs=425.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH--HhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
+.+||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|..+|.++|+++++.|+++++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45789999988777789999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..+++..|+..+++.+++++...++..... .+.. .....+++++|+|||++|+|||||+...+
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 159 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT-LPAD---GPHHVYTLHEPIGVVGQIIPWNFPLLMFA 159 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceEEEEEeceeeEEEECCCccHHHHHH
Confidence 9999999999999999876799999999999988766543221 1111 12245788999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|.. +.++.|++ ++++|+||||+.+|+.
T Consensus 160 ~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~ 235 (476)
T cd07142 160 WKVGPALACGNTIVLKPAEQTPLSALLAAKL----AAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKI 235 (476)
T ss_pred HHHHHHHHcCCEEEEECCCcccHHHHHHHHH----HHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 9999999999999999999999999877765 567999999999999965 57788887 8999999999999999
Q ss_pred HHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 284 v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
|++.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|.++++++++|
T Consensus 236 v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G 315 (476)
T cd07142 236 IMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVG 315 (476)
T ss_pred HHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 9999997 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 316 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~ 391 (476)
T cd07142 316 DPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSIL 391 (476)
T ss_pred CCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceEEEE
Confidence 999999999999999999999999999999999999999853 2368899999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+|+++|.+|+ ++|++
T Consensus 392 ~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~ft~ 470 (476)
T cd07142 392 KFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYAL-NNYLQ 470 (476)
T ss_pred eeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHH-HHhhh
Confidence 999999999999999999999999999999999999999999999987655544566 9999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|.+
T Consensus 471 ~k~v 474 (476)
T cd07142 471 VKAV 474 (476)
T ss_pred eeEE
Confidence 9976
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-92 Score=757.86 Aligned_cols=466 Identities=28% Similarity=0.403 Sum_probs=423.3
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH-HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
++||+|+|.. ++..++++||+||+++++++.++.+|+++++++|++||.. |+++|..+|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 5789999986 4688999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++...|+..+++.++++++..++..................+++++|+|||++|+|||||+...+++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 99999999999999865699999999999988776532221110000001224568899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc--cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
+++||++||+||+|||+.+|+++.++.+++ .++|+|+|++|+|+|.+ +.++.|+. ++|+|+||||+.+|+.|
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~----~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i 235 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVM----NAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAI 235 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHH----HHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 999999999999999999999998777664 56999999999999854 36777876 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 236 ~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 315 (481)
T TIGR03216 236 MKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVP 315 (481)
T ss_pred HHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCC-CCCCCceeccEEEEcCCCCCcccccccccceeeeee
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~-~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
.++++++||++++.++++++++|++++++|+++++||.+...+ ...+|+|++|||+.+++++|++++||+||||++|++
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~ 395 (481)
T TIGR03216 316 DDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAP 395 (481)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEE
Confidence 9999999999999999999999999999999999999754322 124699999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCcee
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~ 519 (535)
|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+........|| .||+|+++|.+|+ ++|++.
T Consensus 396 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~f~~~ 474 (481)
T TIGR03216 396 FDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSL-EFYTEL 474 (481)
T ss_pred eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHH-HHhhce
Confidence 99999999999999999999999999999999999999999999997655444456 8999999999999 579999
Q ss_pred eee
Q 009397 520 KML 522 (535)
Q Consensus 520 k~~ 522 (535)
|.+
T Consensus 475 k~v 477 (481)
T TIGR03216 475 TNV 477 (481)
T ss_pred EEE
Confidence 986
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-92 Score=756.90 Aligned_cols=464 Identities=24% Similarity=0.356 Sum_probs=424.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
.+||+|+|+.+.++..++++||+||+++++++.++.+|++.++++|++|++.|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999887667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||+..+++ +|+..+++.+++++...+..... ..+.. ..+...+++++|+|||++|+|||||+...++++
T Consensus 82 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 157 (478)
T cd07085 82 RLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGE-YLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMF 157 (478)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCe-ecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 999999999999995 89999999999988765543222 11110 112346789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+++|+.+.++.|++ +++.|+||||+.+|+.|++.
T Consensus 158 ~~ALaaGN~VvlKps~~tp~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 233 (478)
T cd07085 158 PMAIACGNTFVLKPSERVPGAAMRLAELL----QEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYER 233 (478)
T ss_pred HHHHhcCCEEEEECCCcCcHHHHHHHHHH----HHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999998777764 5689999999999987777888888 79999999999999999999
Q ss_pred HhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCC
Q 009397 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (535)
Q Consensus 288 aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (535)
++++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 234 aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~ 313 (478)
T cd07085 234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDP 313 (478)
T ss_pred HhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCH
Q 009397 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (535)
Q Consensus 368 ~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 447 (535)
++++||++++.++++++++|++++++||++++||.....+..+.|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 393 (478)
T cd07085 314 GADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTL 393 (478)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999999998654333346899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC--CcCcHHHhhccCceee
Q 009397 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD--EFDSVHVILNDPTKLK 520 (535)
Q Consensus 448 ~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G--~~~g~~gl~~~~~~~k 520 (535)
||||+++|+++|||++||||+|.++++++++++++|+|+||++.... ...|| .||+| +++|.+|+ ++|++.|
T Consensus 394 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~-~~~~~~k 472 (478)
T cd07085 394 DEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGV-RFYTQTK 472 (478)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHH-HHhcceE
Confidence 99999999999999999999999999999999999999999974332 23356 89999 57899999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
.+
T Consensus 473 ~v 474 (478)
T cd07085 473 TV 474 (478)
T ss_pred EE
Confidence 87
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-92 Score=756.93 Aligned_cols=463 Identities=27% Similarity=0.427 Sum_probs=426.1
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
++||+|+|..+.++.+++++||+||+++++++.++.+|++.++++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 56899999887777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||++.+++ +|+..+++.++++++..++.+.....+.+ ....+++++|+|||++|+|||||+...++++
T Consensus 82 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 156 (488)
T TIGR02299 82 VLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD----THLNYTVRVPVGPVGLITPWNAPFMLSTWKI 156 (488)
T ss_pred HHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC----CceEEEEEEecceEEEECCCccHHHHHHHHH
Confidence 999999999999996 89999999999999887754443322221 1345788999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.. +.++.|+. .+|.|.||||+.+|+.|++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 232 (488)
T TIGR02299 157 APALAFGNTVVLKPAEWSPLTAARLAEI----AKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232 (488)
T ss_pred HHHHHcCCEEEEECchhchHHHHHHHHH----HHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999998766655 667999999999999854 56788887 7999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (535)
.++++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 233 ~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 233 NGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC---CCCCCCceeccEEEEcCCCCCcccccccccceeeeee
Q 009397 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL---SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 367 ~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~---~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
+++++|||+++.++++++++|++++++|+++++||..... +....|+|++|||+.+++++|++++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 9999999999999999999999999999999999975321 0123588999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCcee
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~ 519 (535)
|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+........|| .||+|+++|.+|+ ++|++.
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~~~~~ 471 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSF-DFYTET 471 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHH-HHHhce
Confidence 99999999999999999999999999999999999999999999987654444456 8999999999999 589999
Q ss_pred eee
Q 009397 520 KML 522 (535)
Q Consensus 520 k~~ 522 (535)
|.+
T Consensus 472 k~i 474 (488)
T TIGR02299 472 KNV 474 (488)
T ss_pred EEE
Confidence 987
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-91 Score=753.44 Aligned_cols=462 Identities=26% Similarity=0.405 Sum_probs=422.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+++||+|+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||++.++...|+..+++.++++++...+..... .+.. .....+++++|+|||++|+|||||+...+++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 156 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI-SEID---ENTVAYHFHEPLGVVGQIIPWNFPLLMATWK 156 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCee-ecCC---CCceEEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999865799999999999998766532211 1110 1234578899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|.++..+++++++ + +|+|++|+|+|.. +.++.|+. +++.|+||||+.+|+.|+
T Consensus 157 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 231 (479)
T cd07116 157 LAPALAAGNCVVLKPAEQTPASILVLMELIGD----L-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIM 231 (479)
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----H-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999988888665 4 9999999999854 67888886 999999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecC------CCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDD------VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~d------aDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
+.++++++|+++|+|||||+||++| +|++.|++.++++. +++||.|++++|||||+++||+|+++|.++++++
T Consensus 232 ~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 310 (479)
T cd07116 232 QYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAI 310 (479)
T ss_pred HHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999988 79999999999865 5999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
++|+|.++++++||+++++++++++++|++++++||++++||.+...+....|+|++|||+.+++ +|++++||+||||+
T Consensus 311 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl 389 (479)
T cd07116 311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVL 389 (479)
T ss_pred CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceE
Confidence 99999999999999999999999999999999999999999976433223468999999999875 99999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|+ .||+||++|.+|| ++
T Consensus 390 ~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~ 468 (479)
T cd07116 390 AVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMML-DH 468 (479)
T ss_pred EEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHH-HH
Confidence 999999999999999999999999999999999999999999999999987655544556 9999999999999 58
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 469 ~~~~k~~ 475 (479)
T cd07116 469 YQQTKNL 475 (479)
T ss_pred hhceEEE
Confidence 9999986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-91 Score=747.56 Aligned_cols=447 Identities=26% Similarity=0.451 Sum_probs=414.7
Q ss_pred eEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 009397 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS 144 (535)
Q Consensus 65 ~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~ 144 (535)
.++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+|||..++.
T Consensus 2 ~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 81 (457)
T PRK09406 2 PIATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK 81 (457)
T ss_pred ceeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred hhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecC
Q 009397 145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (535)
Q Consensus 145 ~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps 224 (535)
+|+..+++.++|+++.+++++......... ......+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 82 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 82 -AEALKCAKGFRYYAEHAEALLADEPADAAA-VGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCccccccC-CCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 799999999999999988776543221111 122356788999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCc
Q 009397 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (535)
Q Consensus 225 ~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk 302 (535)
+.+|+++.++.++ |.++|+|+|++|+|+++.+.+..|++ ++++|+||||+++|+.|++.+++++||+++|+|||
T Consensus 160 ~~~p~~~~~l~~l----~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~ 235 (457)
T PRK09406 160 SNVPQTALYLADL----FRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGS 235 (457)
T ss_pred CcCcHHHHHHHHH----HHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCC
Confidence 9999999877666 56699999999999865566777776 99999999999999999999999999999999999
Q ss_pred ceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 303 ~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
||+||++|+|++.+++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 236 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~ 315 (457)
T PRK09406 236 DPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDE 315 (457)
T ss_pred CeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcE
Q 009397 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (535)
Q Consensus 383 l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 462 (535)
++++|++++++|+++++||.+.. ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|+++|||+
T Consensus 316 ~~~~i~~a~~~Ga~~l~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 391 (457)
T PRK09406 316 VEKQVDDAVAAGATILCGGKRPD----GPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLG 391 (457)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCC----CCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999998532 36899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.+.++++++++++|+|+||+........|| .||+|+++|.+|+ ++|++.|++
T Consensus 392 ~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t~~k~v 454 (457)
T PRK09406 392 SNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGI-REFCNIKTV 454 (457)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHH-HHhhceEEE
Confidence 9999999999999999999999999998766655566 8999999999999 579999986
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=747.54 Aligned_cols=446 Identities=26% Similarity=0.458 Sum_probs=413.0
Q ss_pred CCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhh
Q 009397 63 ETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142 (535)
Q Consensus 63 ~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~e 142 (535)
.++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+||+..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEe
Q 009397 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222 (535)
Q Consensus 143 a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~k 222 (535)
+. +|+..+++.++|++.++++++...... ......+++++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 86 a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~K 160 (462)
T PRK13968 86 AR-AEVAKSANLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLK 160 (462)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 95 899999999999999887766543221 1234568899999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccC
Q 009397 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (535)
Q Consensus 223 ps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg 300 (535)
||+.+|+++.++.++ +.++|+|+|++|+|+|..+....|+. .+++|+||||+++|+.|++.++++++|+++|+|
T Consensus 161 Ps~~tp~~~~~l~~~----~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElG 236 (462)
T PRK13968 161 HAPNVMGCAQLIAQV----FKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG 236 (462)
T ss_pred CCCcChHHHHHHHHH----HHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecC
Confidence 999999998766655 56799999999999986554455655 899999999999999999999999999999999
Q ss_pred CcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHH
Q 009397 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (535)
Q Consensus 301 Gk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~ 380 (535)
||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..++
T Consensus 237 Gk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~ 316 (462)
T PRK13968 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLR 316 (462)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCC
Q 009397 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (535)
Q Consensus 381 ~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 460 (535)
+++++++++++.+|+++++||.+.. ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++||
T Consensus 317 ~~~~~~i~~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~g 392 (462)
T PRK13968 317 DELHHQVEATLAEGARLLLGGEKIA----GAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFG 392 (462)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcCC----CCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCc
Confidence 9999999999999999999997432 258899999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+++|||+|.+.++++++++++|+|+||+........|+ .||+|+++|.+|| ++|++.|.+
T Consensus 393 Ls~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~ft~~k~v 457 (462)
T PRK13968 393 LSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGL-HEFCNIQTV 457 (462)
T ss_pred ceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHH-HHhcceeEE
Confidence 999999999999999999999999999997544433455 8999999999999 589999987
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-91 Score=751.24 Aligned_cols=462 Identities=26% Similarity=0.401 Sum_probs=426.4
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
.+++||+|+|..+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|.++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 45679999999877788999999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++++++..+++.... .+.. .....+++++|+|||++|+|||||+..
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~ 161 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT-IPMD---GDFFTYTRHEPVGVCGQIIPWNFPLLM 161 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCce-ecCC---CCceEEEEEeceeEEEEEccChhHHHH
Confidence 999999999999999987767899999999999998877664421 1111 123457899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|+. +.++.|+. ++|.|+||||+.+|
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g 237 (481)
T cd07141 162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASL----IKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVG 237 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHH----HHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence 999999999999999999999999999877666 567999999999999965 56788887 89999999999999
Q ss_pred HHHHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|++++++++
T Consensus 238 ~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 317 (481)
T cd07141 238 KLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRV 317 (481)
T ss_pred HHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++|||+++.++++++++|++|+++|+++++||+... ..|+|++|||+.+++++|++++||+||||++
T Consensus 318 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 393 (481)
T cd07141 318 VGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHG----DKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQ 393 (481)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC----CCCeEEeeEEEecCCCCChhhhccccCCeEE
Confidence 999999999999999999999999999999999999999998532 3689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+|+++|.+|+ ++|
T Consensus 394 v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~f 472 (481)
T cd07141 394 IFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGL-QEY 472 (481)
T ss_pred EEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHH-HHH
Confidence 99999999999999999999999999999999999999999999999997655444456 8999999999999 579
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|.+
T Consensus 473 t~~k~v 478 (481)
T cd07141 473 TEVKTV 478 (481)
T ss_pred hheEEE
Confidence 999976
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-91 Score=747.56 Aligned_cols=461 Identities=25% Similarity=0.390 Sum_probs=422.2
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
|.+||+|+|+.+. ..++++||. ||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++|+++
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4578999998764 347999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+|||..+++ .|+..+++.++|+++..++...+..... ..+....++++|+|||++|+|||||+...++
T Consensus 79 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~ 154 (473)
T cd07097 79 LARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETLPST---RPGVEVETTREPLGVVGLITPWNFPIAIPAW 154 (473)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccC---CCCceEEEEEEeeeeEEEEcccChHHHHHHH
Confidence 99999999999999995 6999999999999988776543321111 1234567899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++|+. +.++.|++ ++++|.||||+.+|+.|
T Consensus 155 ~i~~ALaaGN~VIlKps~~~p~~~~~l~~~----~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 230 (473)
T cd07097 155 KIAPALAYGNTVVFKPAELTPASAWALVEI----LEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI 230 (473)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHH----HHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 999999999999999999999999877766 566999999999999965 57888887 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 231 ~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 310 (473)
T cd07097 231 AAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDA 310 (473)
T ss_pred HHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 388 (473)
T cd07097 311 LDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKR--PDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRV 388 (473)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEeccCCCCChhhhCCCcCceEEEecc
Confidence 999999999999999999999999999999999999975332 146889999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC-CcCcHHHhhccCce
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD-EFDSVHVILNDPTK 518 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G-~~~g~~gl~~~~~~ 518 (535)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ...|+ .||+| |++|.+|+ ++|++
T Consensus 389 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l-~~f~~ 467 (473)
T cd07097 389 RDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAAL-EFYTT 467 (473)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHH-HHhhc
Confidence 99999999999999999999999999999999999999999999865432 23355 89999 99999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 468 ~k~v 471 (473)
T cd07097 468 IKTV 471 (473)
T ss_pred eeEE
Confidence 9986
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-91 Score=748.55 Aligned_cols=460 Identities=26% Similarity=0.395 Sum_probs=423.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
..+||+|+|+.+ +++.++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 81 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEF 81 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999875 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++...|+..+++.+++++...++...+.. +.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 82 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~ 158 (475)
T PRK13473 82 ARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAA-GEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWK 158 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCceeEEEEecceeEEEEccCChHHHHHHHH
Confidence 999999999999988656999999999999877665433211 110 12234578899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++.++.+++. ++ +|+|++|+|+|. .+.++.|+. ++|.|.||||+++|+.|+
T Consensus 159 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~----~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~ 233 (475)
T PRK13473 159 LAPALAAGNTVVLKPSEITPLTALKLAELAA----DI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL 233 (475)
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHH----Hh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999988877764 46 999999999994 477888887 799999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.++++++|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 234 ~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 313 (475)
T PRK13473 234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPD 313 (475)
T ss_pred HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcC-CcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~G-a~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
++++++|||+++.++++++++|++++++| +++++||++. ...|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 314 ~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 389 (475)
T PRK13473 314 DEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPF 389 (475)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeEEEecc
Confidence 99999999999999999999999999999 9999999843 136889999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|.||||+++|+++|||+++|||+|.+++.++++++++|+|+||+........|+ .||+|+++|.+|+ ++|++.|
T Consensus 390 ~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~~t~~k 468 (475)
T PRK13473 390 DDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGL-EDYTVVR 468 (475)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHH-HHHhceE
Confidence 9999999999999999999999999999999999999999999997655444456 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
.+
T Consensus 469 ~i 470 (475)
T PRK13473 469 HV 470 (475)
T ss_pred EE
Confidence 87
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-91 Score=746.84 Aligned_cols=460 Identities=27% Similarity=0.441 Sum_probs=422.9
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009397 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 131 (535)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~ 131 (535)
||+|+|..+.++++++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 68999987767789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHH
Q 009397 132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (535)
Q Consensus 132 ~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~ 211 (535)
+++|+||+..++...|+..+++.++++++..++.... ..+.. .....+++++|+|||++|+|||||+...++++++
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGE-IIPLP---IPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAP 156 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCc-cccCC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 9999999999986679999999999999887664322 11111 1134578899999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHH
Q 009397 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (535)
Q Consensus 212 AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~a 288 (535)
||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++|+ .+.++.|+. .+|.|.||||+.+|+.|++.+
T Consensus 157 ALaaGN~VvlKps~~tp~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a 232 (467)
T TIGR01804 157 ALAAGNAMVFKPSEITPLTALKVAEL----MEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA 232 (467)
T ss_pred HHhcCCEEEeeCCccCcHHHHHHHHH----HHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999877665 56799999999999987 467888887 799999999999999999999
Q ss_pred hccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCC
Q 009397 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368 (535)
Q Consensus 289 a~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (535)
++++||+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHH
Q 009397 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (535)
Q Consensus 369 ~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 448 (535)
+++|||+++.+.++++++|++++++|+++++||.+...+....|+|++|||+.+++++|++++||+||||++|++|+|.|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 99999999999999999999999999999999975443333468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 449 eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+........|+ .||+|+++|.+|| ++|++.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~-~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGL-AEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHH-HHHhccC
Confidence 999999999999999999999999999999999999999997655444456 8999999999999 4677654
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-91 Score=746.63 Aligned_cols=463 Identities=28% Similarity=0.443 Sum_probs=425.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH-HHh-hcCHHHHHHHHHHHHHHHHHh
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWA-KSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~W~-~~~~~~R~~iL~~la~~l~~~ 124 (535)
+++++||+|+|..+.++..++++||+||+++++++.++.+|++.++++|++||. .|+ ++|..+|.++|+++++.|+++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~ 84 (481)
T cd07143 5 QPTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERN 84 (481)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHh
Confidence 456789999998877778899999999999999999999999999999999998 599 999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++++++..++..... .+.. .....+++++|+|||++|+|||||+..
T Consensus 85 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~ 160 (481)
T cd07143 85 LDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV-IETD---IKKLTYTRHEPIGVCGQIIPWNFPLLM 160 (481)
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC---CCceEEEEEecceeEEEECCCcChHHH
Confidence 999999999999999977666799999999999998776543221 1111 123467889999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++..+.++ |.++|+|++++|+|+|.. +.++.|+. .+|+|.||||+.+|
T Consensus 161 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~----l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G 236 (481)
T cd07143 161 CAWKIAPALAAGNTIVLKPSELTPLSALYMTKL----IPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVG 236 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHH----HHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHH
Confidence 999999999999999999999999999876665 567999999999999965 56788887 89999999999999
Q ss_pred HHHHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.+++++++
T Consensus 237 ~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 316 (481)
T cd07143 237 RKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLK 316 (481)
T ss_pred HHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcC
Confidence 999999885 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++||++++.++++++++|++++.+|+++++||.+. ...|+|++|||+.+++++|++++||+||||++
T Consensus 317 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 392 (481)
T cd07143 317 VGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVA 392 (481)
T ss_pred CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeEE
Confidence 99999999999999999999999999999999999999999842 13689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|.+|||+++|+++|||++||||+|.+.+.++++++++|+|+||+........|+ .||+|+++|.+|+ ++|
T Consensus 393 v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~~ 471 (481)
T cd07143 393 VIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYAL-ENY 471 (481)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHH-HHH
Confidence 99999999999999999999999999999999999999999999999997655544556 9999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|.+
T Consensus 472 t~~k~i 477 (481)
T cd07143 472 TQIKAV 477 (481)
T ss_pred hCeEEE
Confidence 999986
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-91 Score=749.35 Aligned_cols=461 Identities=28% Similarity=0.436 Sum_probs=424.9
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
||+|+|..+.++..++++||.||+++++++.++.+|+++++++|++|++ .|+++|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5899998776678999999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||+..++. .|+..+++.++++++..++... ...+.. .+....++++|+|||++|+|||||+...++++
T Consensus 81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 155 (482)
T cd07119 81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETG-EVYDVP---PHVISRTVREPVGVCGLITPWNYPLLQAAWKL 155 (482)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccCC---CCceEEEEEeeeeeEEEEcCCchHHHHHHHHH
Confidence 999999999999995 7999999999999988776332 221111 23456789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+++. +.++.|++ .+++|.||||+.+|+.|++
T Consensus 156 ~~ALaaGN~VilKps~~~p~~~~~l~~~----~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 231 (482)
T cd07119 156 APALAAGNTVVIKPSEVTPLTTIALFEL----IEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR 231 (482)
T ss_pred HHHHhcCCEEEEECCccccHHHHHHHHH----HHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999877776 456999999999999866 47888887 8999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (535)
.++++++|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCC
Q 009397 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (535)
Q Consensus 367 ~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 446 (535)
+++++||++++.++++++++|++++++|+++++||.+...+....|+|++|||+.+++++|+++++|+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 99999999999999999999999999999999999854332234689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 447 ~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|.+
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l-~~~t~~k~v 470 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGL-EEYQETKHI 470 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHH-HHHhceEEE
Confidence 99999999999999999999999999999999999999999997555444556 7999999999999 579999987
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-90 Score=745.26 Aligned_cols=466 Identities=28% Similarity=0.461 Sum_probs=426.1
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH-HhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
.+.++||+|+|..+.++..++++||+||+++++++.++.+|++.++++|++|++. |+++|.++|.++|+++++.|.+++
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 6 QPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3557899999988766788999999999999999999999999999999999996 889999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++...|+..+++.+++++++.++.... ..+.. .....+++++|+|||++|+|||||+...
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~ 161 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGK-TIPTS---PNKLAYTLHEPYGVCGQIIPWNYPLAMA 161 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eecCC---CCceEEEEEecceEEEEECcCCCHHHHH
Confidence 9999999999999998765679999999999999887765322 11111 1234578899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|.. +.++.|+. +++.|.||||+.+|+
T Consensus 162 ~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~ 237 (484)
T cd07144 162 AWKLAPALAAGNTVVIKPAENTPLSLLYFANL----VKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGR 237 (484)
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHHHHH----HHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHH
Confidence 99999999999999999999999999876665 567999999999999854 67888887 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc-ccC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (535)
.|++.++++++|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|++++++ +++
T Consensus 238 ~i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~ 317 (484)
T cd07144 238 LVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKV 317 (484)
T ss_pred HHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985 899
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++||++++.++++++++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|
T Consensus 318 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 396 (484)
T cd07144 318 GSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVI 396 (484)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEE
Confidence 999999999999999999999999999999999999999985321 1236899999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+........|+ .||+|+++|.+|| ++|+
T Consensus 397 ~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t 475 (484)
T cd07144 397 SKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGL-ETYT 475 (484)
T ss_pred eccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999997544434456 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|.+
T Consensus 476 ~~k~v 480 (484)
T cd07144 476 QTKAV 480 (484)
T ss_pred ceEEE
Confidence 99986
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-90 Score=743.66 Aligned_cols=461 Identities=27% Similarity=0.415 Sum_probs=424.8
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH--HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+||+|+|..+.++++++++||+||+++++++.++.+|++.++++|++|++. |+++|..+|.++|+++++.|++|+++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 478999987766788999999999999999999999999999999999984 999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++...|+..+++.++++++..+++...+..+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 157 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGS---GGGHVLVRREPVGVVAAIVPWNAPLFLAALK 157 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceEEEEEEeccEEEEEcCCchHHHHHHHH
Confidence 9999999999998886679999999999999887765443332221 1345678999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
+++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++|+.+.++.|++ .++.|.||||+.+|+.|++
T Consensus 158 i~~ALaaGN~VvlKps~~~p~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~ 233 (471)
T cd07139 158 IAPALAAGCTVVLKPSPETPLDAYLLAEA----AEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAA 233 (471)
T ss_pred HHHHHhcCCEEEEECCCcCCHHHHHHHHH----HHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999766655 66799999999999986677888887 7999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (535)
.++++++|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 234 ~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 234 VCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCC
Q 009397 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (535)
Q Consensus 367 ~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 446 (535)
+++++||++++.++++++++|++++.+|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 391 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAG--LDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDD 391 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCC
Confidence 9999999999999999999999999999999999975321 24688999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 447 ~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.. .....|+ .||+|+++|++|+ ++|++.|++
T Consensus 392 ~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~-~~ft~~k~i 469 (471)
T cd07139 392 EDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGL-DAYLETKSI 469 (471)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHH-HHHhceeEE
Confidence 999999999999999999999999999999999999999999975 3333456 8999999999999 589999986
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-90 Score=741.18 Aligned_cols=457 Identities=26% Similarity=0.409 Sum_probs=421.9
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~ 130 (535)
+||+|+|..+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|.+++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 47899998877778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHH
Q 009397 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (535)
Q Consensus 131 ~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~ 210 (535)
++++|+||+..+++..|+..+++.++++++..+++..+.. ....+++++|+|||++|+|||||+..++++++
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 152 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVA 152 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHH
Confidence 9999999999988667999999999999988766543221 12356789999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 211 ~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
+||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+++|+. +.++.|++ +++.|.||||+.+|+.|++.
T Consensus 153 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~----~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 228 (466)
T cd07138 153 PALAAGCTVVLKPSEVAPLSAIILAEI----LDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA 228 (466)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999877665 567999999999999866 57788887 89999999999999999999
Q ss_pred HhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCC
Q 009397 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (535)
Q Consensus 288 aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (535)
++++++|+++|+|||||+||++|||++.|++.+++|+|+++||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 229 aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 308 (466)
T cd07138 229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDP 308 (466)
T ss_pred HhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCH
Q 009397 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (535)
Q Consensus 368 ~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 447 (535)
++++|||+++.+++++++++++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|.
T Consensus 309 ~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~-~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~ 387 (466)
T cd07138 309 ATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPE-GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDE 387 (466)
T ss_pred CCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-cCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCH
Confidence 999999999999999999999999999999999963211 1246899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 448 ~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+.. .....|+ .||+|+++|.+|+ ++|++.|.+
T Consensus 388 ~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~-~~~~~~k~v 464 (466)
T cd07138 388 DEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGL-EEFLEVKSI 464 (466)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHH-HHhcceeEE
Confidence 99999999999999999999999999999999999999999863 2223345 8999999999999 589998876
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-90 Score=741.21 Aligned_cols=453 Identities=51% Similarity=0.837 Sum_probs=423.0
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhH
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei 148 (535)
+||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|.+++++|++++++|+||++.+++..|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999977899
Q ss_pred HHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCch
Q 009397 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (535)
Q Consensus 149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~ 228 (535)
..+++.++|+++++++.+.+...+.+....+...+++++|+|||++|+|||||+..++.++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999999988876655444433222345567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEE
Q 009397 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306 (535)
Q Consensus 229 ~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~i 306 (535)
+++..+++++.++|.++|+|+|++|+|+|+.+.++.|+. .++.|+||||+.+|++|++.++++++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 999999999999999999999999999997788888887 899999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009397 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 307 V~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~ 386 (535)
|++|+|++.+++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEe
Q 009397 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (535)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvf 466 (535)
+++++++|+++++||.....+..+.|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++|||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999975443333468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 467 SGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 467 s~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+|.+.++++++++++|+|+||+..+.. ...|| .||+|+++|.+|+ ++|++.|.+
T Consensus 401 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~-~~~~~~k~~ 461 (465)
T cd07098 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGL-RGLCNPKSV 461 (465)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHH-HHhheeEEE
Confidence 9999999999999999999999975443 23456 8999999999999 578998886
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-90 Score=746.41 Aligned_cols=459 Identities=22% Similarity=0.314 Sum_probs=418.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHH-hHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE-HQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~-~~~ 126 (535)
+.+||+|+|+.+ +.+++++||+| |+++++++.++.+|++++|++|++||+.|+++|..+|.++|+++++.|++ +++
T Consensus 33 ~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (522)
T cd07123 33 IPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRY 110 (522)
T ss_pred cCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHH
Confidence 557999999864 56899999995 99999999999999999999999999999999999999999999999996 899
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecc-eEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||+..++...|+...++.++|++..+++.......... .+....++++|+ |||++|+|||||+...
T Consensus 111 ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 111 ELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSP---AGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred HHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCC---CCceeEEEEecCCceEEEECCcccHHHHH
Confidence 999999999999999986668999999999999887776543322111 134567899998 9999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
.+++++|| +||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|+. +.++.|+. +++.|+||||+++|+
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~ 262 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKI----LEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFK 262 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHH----HHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHH
Confidence 99999999 69999999999999999877765 566999999999999976 57888887 999999999999999
Q ss_pred HHHHHHhccCC------ceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH
Q 009397 283 MIMRNASKTLT------PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (535)
Q Consensus 283 ~v~~~aa~~~~------pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~ 356 (535)
.|++.++++++ |+++|||||||+||++|+|++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++
T Consensus 263 ~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 342 (522)
T cd07123 263 SLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEEL 342 (522)
T ss_pred HHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence 99999999887 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccc
Q 009397 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 435 (535)
Q Consensus 357 ~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~-Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~f 435 (535)
+++++|+|.++++++|||++++++++++++|++++++ |+++++||.+. ...|+|++|||+.+++++|++++||+|
T Consensus 343 ~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~----~~~g~f~~PTvl~~v~~~~~i~~eEiF 418 (522)
T cd07123 343 KEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD----DSVGYFVEPTVIETTDPKHKLMTEEIF 418 (522)
T ss_pred hhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcC----CCCCceEcCEEEeCCCCCChhhhcCCC
Confidence 9999999999999999999999999999999999999 99999999742 236899999999999999999999999
Q ss_pred cceeeeeecCC--HHHHHHHhhcCC-CCcEEEEecCCHHHHHHHHhhc--CcceEEECCCCcccc--CCCC----CCCCC
Q 009397 436 GPIMPIMKFNT--DEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYM--CQVF----KCIFD 504 (535)
Q Consensus 436 gPvl~v~~~~~--~~eai~~~n~~~-~gL~asvfs~d~~~~~~~a~~l--~~G~v~IN~~~~~~~--~~~~----~SG~G 504 (535)
|||++|++|+| +||||+++|+++ |||++||||+|.+++.++++++ ++|+|+||+...... ..|| .||+|
T Consensus 419 GPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~g 498 (522)
T cd07123 419 GPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTN 498 (522)
T ss_pred CCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCC
Confidence 99999999985 799999999985 9999999999999999999996 599999999765442 3456 89996
Q ss_pred -CcCcHHHhhccCceeeee
Q 009397 505 -EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 505 -~~~g~~gl~~~~~~~k~~ 522 (535)
|++|.+|+ ++|++.|++
T Consensus 499 g~~~g~~~l-~~~~~~k~~ 516 (522)
T cd07123 499 DKAGSPLNL-LRWVSPRTI 516 (522)
T ss_pred cccCCHHHH-HHhcceEEE
Confidence 99999999 589999987
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-90 Score=740.06 Aligned_cols=459 Identities=30% Similarity=0.482 Sum_probs=422.9
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009397 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 131 (535)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~ 131 (535)
||+|+|+.+.++..++++||.||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 68999987767789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHH
Q 009397 132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (535)
Q Consensus 132 ~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~ 211 (535)
+++|+||+..+++ .|+..+++.++++++.+++..... .+.. ..+...+++++|+|||++|+|||||+...++++++
T Consensus 81 ~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (468)
T cd07088 81 IVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEI-IPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP 156 (468)
T ss_pred HHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcc-ccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence 9999999999985 799999999999988776543321 1111 12345678899999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHH
Q 009397 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (535)
Q Consensus 212 AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~a 288 (535)
||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++++. +.++.|+. .++.|.||||+.+|+.|++.+
T Consensus 157 AL~aGN~VVlKps~~~p~~~~~l~~~----~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 157 ALVTGNTIVIKPSEETPLNALEFAEL----VDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHH----HHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999877766 556999999999999976 46788887 899999999999999999999
Q ss_pred hccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCC
Q 009397 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368 (535)
Q Consensus 289 a~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (535)
+++++|+++|+|||||+||++|+|++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAA 312 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHH
Q 009397 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (535)
Q Consensus 369 ~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 448 (535)
+++||++++.++++++++|++++++|+++++||..... ..|+|++|||+.+++++|.++++|+||||++|++|+|++
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 389 (468)
T cd07088 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEG---EKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLD 389 (468)
T ss_pred CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC---CCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHH
Confidence 99999999999999999999999999999999975321 368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 449 eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.......++ .||+|+++|++|+ +.|++.|.+
T Consensus 390 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l-~~~t~~k~v 466 (468)
T cd07088 390 EAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGL-EEYLQTKVV 466 (468)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHH-HHHhceeEE
Confidence 999999999999999999999999999999999999999997654433344 8999999999999 579999876
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-90 Score=738.05 Aligned_cols=440 Identities=31% Similarity=0.514 Sum_probs=406.2
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||+||+++++++.++.+|++.++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+||+..+++ +|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GE 79 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999994 89
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++|++...++...... +.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~ 156 (448)
T TIGR01780 80 ILYAASFLEWFAEEAKRVYGDTI-PSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQT 156 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcCccc-cCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccc
Confidence 99999999999987766543211 111 123345678899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-c-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcc
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~ 303 (535)
|+++..++++ |.++|+|+|++|+|+|+ + +.++.|+. +++.|.||||+.+|+.|++.++++++|+++|+||||
T Consensus 157 p~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~ 232 (448)
T TIGR01780 157 PLSALALARL----AEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNA 232 (448)
T ss_pred hHHHHHHHHH----HHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCC
Confidence 9999887776 46699999999999997 3 66788887 899999999999999999999999999999999999
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHH
Q 009397 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (535)
Q Consensus 304 p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l 383 (535)
|+||++|+|++.+++.+++|+|.++||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++
T Consensus 233 ~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v 312 (448)
T TIGR01780 233 PFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKV 312 (448)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEE
Q 009397 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (535)
Q Consensus 384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a 463 (535)
+++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++
T Consensus 313 ~~~i~~a~~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~ 388 (448)
T TIGR01780 313 EKHIADAVEKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAA 388 (448)
T ss_pred HHHHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceE
Confidence 999999999999999999742 1358899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 464 svfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
||||+|.++++++++++++|+|+||+........|| .||+|+++|.+|+. +|++.|
T Consensus 389 ~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~-~~~~~k 448 (448)
T TIGR01780 389 YFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIE-EYLETK 448 (448)
T ss_pred EEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHH-HHhccC
Confidence 999999999999999999999999997654434456 99999999999994 677655
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=735.82 Aligned_cols=427 Identities=25% Similarity=0.401 Sum_probs=394.4
Q ss_pred CCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhc
Q 009397 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (535)
Q Consensus 83 ~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (535)
....|+++++++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.++|++++.
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999997679999999999999999
Q ss_pred hhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 009397 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (535)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l 242 (535)
+++.++..............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~--- 163 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLE--- 163 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHH---
Confidence 88877544332221223456899999999999999999999999999999999999999999999999998887754
Q ss_pred HhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHH
Q 009397 243 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 321 (535)
Q Consensus 243 ~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~ 321 (535)
+ ++|+|++|+|+|.++.+..|+. .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|+|++.|++.++
T Consensus 164 -~-~lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~ 241 (484)
T PLN02174 164 -Q-YLDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRII 241 (484)
T ss_pred -H-hCCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence 4 6999999999997777777887 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 322 RAAL-QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 322 ~~~f-~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
+|+| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.++++++++|+++ ++|+++++|
T Consensus 242 ~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~G 319 (484)
T PLN02174 242 AGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYG 319 (484)
T ss_pred HHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEEC
Confidence 9999 59999999999999999999999999999999999999987 78999999999999999999998 789999999
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
|.+ ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++
T Consensus 320 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l 394 (484)
T PLN02174 320 GEK-----DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATV 394 (484)
T ss_pred CCc-----CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcC
Confidence 974 135899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 481 QCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 481 ~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|+|+||+..... ...|+ .||+|+++|.+|+ ++|++.|++
T Consensus 395 ~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft~~K~v 441 (484)
T PLN02174 395 SAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSF-DAFSHKKAV 441 (484)
T ss_pred CcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHH-HHhcceEEE
Confidence 99999999975543 22245 9999999999999 589999998
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-90 Score=745.45 Aligned_cols=473 Identities=22% Similarity=0.307 Sum_probs=425.7
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHH-Hh
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EH 124 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~-~~ 124 (535)
..+.+||+|+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|+ ++
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~ 108 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPY 108 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhc
Confidence 55678999999875 456899999997 8999999999999999999999999999999999999999999999999 59
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecc-eEEEEEcCCchhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFH 203 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~n~P~~ 203 (535)
+++|++++++|+||++.+++..++..+++.++|++..+++.......... .+..+++.++|+ |||++|+|||||+.
T Consensus 109 ~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~---~~~~~~~~~~P~~GVv~~I~PwN~P~~ 185 (533)
T TIGR01236 109 REEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESA---PGEWNRTDYRPLEGFVYAISPFNFTAI 185 (533)
T ss_pred HHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCC---CCceeEEEEecCCCEEEEEeCCchHHH
Confidence 99999999999999999996445999999999999887766443221111 234568899999 99999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~ 280 (535)
...+++++|| +||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|++ +.++.|+. ++++|+||||+++
T Consensus 186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~----~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~ 260 (533)
T TIGR01236 186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRI----LEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTAT 260 (533)
T ss_pred HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHH----HHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHH
Confidence 9999999999 89999999999999999877776 567999999999999964 67888887 9999999999999
Q ss_pred HHHHHHHHhccCCc------eeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHH
Q 009397 281 GRMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354 (535)
Q Consensus 281 g~~v~~~aa~~~~p------v~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~ 354 (535)
|+.|++.++++++| +++|+|||||+||++|+|++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++
T Consensus 261 G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 340 (533)
T TIGR01236 261 FKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLA 340 (533)
T ss_pred HHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHH
Confidence 99999999999874 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC--CcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccc
Q 009397 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG--AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432 (535)
Q Consensus 355 ~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~G--a~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~ 432 (535)
+++++++|+|.++++++||++++.++++++++|++++++| +++++||... ...|+|++|||+.+++++|++++|
T Consensus 341 ~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~----~~~G~~~~PTvl~~~~~d~~i~~e 416 (533)
T TIGR01236 341 ELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYD----DSEGYFVEPTVILSKDPTDPLMVE 416 (533)
T ss_pred HHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcc
Confidence 9999999999999999999999999999999999999997 7999999742 236899999999999999999999
Q ss_pred ccccceeeeeecCC--HHHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcC--cceEEECCCCcccc--CCCC----CC
Q 009397 433 EAFGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYM--CQVF----KC 501 (535)
Q Consensus 433 E~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~asvfs~d~~~~~~~a~~l~--~G~v~IN~~~~~~~--~~~~----~S 501 (535)
|+||||++|++|+| ++|||+++ |+++|||+++|||+|.+++.+++++++ +|+|+||+...... ..|| .|
T Consensus 417 E~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~S 496 (533)
T TIGR01236 417 EIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGS 496 (533)
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccc
Confidence 99999999999998 49999999 889999999999999999999999977 99999998754442 3456 99
Q ss_pred CCC-CcCcHHHhhccCceeeeecCCCCC-CCccc
Q 009397 502 IFD-EFDSVHVILNDPTKLKMLPHFSVP-AIWWC 533 (535)
Q Consensus 502 G~G-~~~g~~gl~~~~~~~k~~~~~~~~-~~~~~ 533 (535)
|+| +++|.+|| .+|++.|.+.....+ +-|=|
T Consensus 497 G~G~~~~g~~~l-~~f~~~k~v~~~~~~~~~~~~ 529 (533)
T TIGR01236 497 GTNDKAGGPLNL-LRWTSARSIKETFVPLTDWSY 529 (533)
T ss_pred cCCcccCCHHHH-HHhcceEEEEEEccccccccC
Confidence 998 99999999 589999998544444 44544
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-90 Score=740.66 Aligned_cols=461 Identities=27% Similarity=0.416 Sum_probs=426.0
Q ss_pred CCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHH
Q 009397 40 DDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119 (535)
Q Consensus 40 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~ 119 (535)
.|-......+.+||+|+|+.+.+++.++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++
T Consensus 13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~ 92 (480)
T cd07111 13 AWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIAR 92 (480)
T ss_pred HHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 46566667778899999988766788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCc
Q 009397 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 199 (535)
Q Consensus 120 ~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n 199 (535)
.|++++++|++++++|+||++.+++..|+..+++.+++++...+... .....++|+|||++|+|||
T Consensus 93 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN 158 (480)
T cd07111 93 HIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWN 158 (480)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCcccceecceEEEECCCc
Confidence 99999999999999999999999976799999999988776554321 1234578999999999999
Q ss_pred hhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCC
Q 009397 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGS 277 (535)
Q Consensus 200 ~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS 277 (535)
||+...++++++||++||+||+|||+.+|+++..+.++ |+++|+|+|++|+|+|+.+.+..|+. .++.|.||||
T Consensus 159 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs 234 (480)
T cd07111 159 FPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEI----CAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGS 234 (480)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999877666 66799999999999997777888887 7999999999
Q ss_pred hHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 278 PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 278 ~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
+.+|+.|++.++++++|+++|+|||||+||++|+|++.+++.+++|+|.++||.|++++|||||+++||+|+++|+++++
T Consensus 235 ~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~ 314 (480)
T cd07111 235 TEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMS 314 (480)
T ss_pred HHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+|.++++++||++++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 315 ~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 390 (480)
T cd07111 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQEEIFGP 390 (480)
T ss_pred hcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcCCCCCC
Confidence 99999999999999999999999999999999999999999998742 13689999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhh
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~ 513 (535)
|++|++|+|.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+........|+ .||+|+++|.+|+
T Consensus 391 vl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~- 469 (480)
T cd07111 391 VLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGL- 469 (480)
T ss_pred eeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHH-
Confidence 99999999999999999999999999999999999999999999999999997655444456 8999999999999
Q ss_pred ccCceeeeec
Q 009397 514 NDPTKLKMLP 523 (535)
Q Consensus 514 ~~~~~~k~~~ 523 (535)
++|++.|+-|
T Consensus 470 ~~~~~~k~~~ 479 (480)
T cd07111 470 YEYLRPSWEP 479 (480)
T ss_pred HHHhhccCcC
Confidence 5788888654
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-90 Score=742.01 Aligned_cols=461 Identities=27% Similarity=0.436 Sum_probs=424.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHH--hhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVW--AKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W--~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.++||+|+|..+.++..++++||+||+++++++.++.+|++.++++|++||..| +++|..+|.++|+++++.|.++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 467999999877677899999999999999999999999999999999999985 499999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++...|+..+++.++++++..++..... .+.. .+...+++++|+|||++|+|||||+...+
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 159 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT-IPID---GNFLAYTRREPIGVCGQIIPWNFPLLMLA 159 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC---CCceEEEEEeceeEEEEECCCcCHHHHHH
Confidence 9999999999999977766899999999999987765543221 1111 23456789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|.++..+.++ |.++|+|+|++|+|+++. +.++.|+. .+|.|+||||+.+|+.
T Consensus 160 ~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~----~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~ 235 (476)
T cd07091 160 WKLAPALAAGNTVVLKPAEQTPLSALYLAEL----IKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRT 235 (476)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHH----HHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHH
Confidence 9999999999999999999999999877766 456999999999999854 56788887 8999999999999999
Q ss_pred HHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 284 v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
|++.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|
T Consensus 236 v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g 315 (476)
T cd07091 236 IMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG 315 (476)
T ss_pred HHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCC
Confidence 9999987 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 316 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~----~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~ 391 (476)
T cd07091 316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHG----SKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTIL 391 (476)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCceECcEEecCCCCCChhhhCCCCCCeEEEe
Confidence 9999999999999999999999999999999999999998432 368899999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+........|+ .||+|+++|.+|+ ++|++
T Consensus 392 ~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~-~~f~~ 470 (476)
T cd07091 392 KFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGL-EEYTQ 470 (476)
T ss_pred ecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999999997655545556 9999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|.+
T Consensus 471 ~k~~ 474 (476)
T cd07091 471 VKAV 474 (476)
T ss_pred eeEE
Confidence 8876
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-90 Score=737.50 Aligned_cols=453 Identities=30% Similarity=0.465 Sum_probs=414.8
Q ss_pred CcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 009397 55 PRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134 (535)
Q Consensus 55 ~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~ 134 (535)
|+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35665555678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHh
Q 009397 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 214 (535)
Q Consensus 135 etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~ 214 (535)
|+||+..++. .|+..+++.+++++...++... ...+.. ..+...+++++|+|||++|+|||||+...++++++||+
T Consensus 81 e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 156 (465)
T cd07151 81 ESGSTRIKAN-IEWGAAMAITREAATFPLRMEG-RILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALA 156 (465)
T ss_pred HcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcC-ccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHH
Confidence 9999999985 6999999999999877655421 111111 12345678899999999999999999999999999999
Q ss_pred cCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhcc
Q 009397 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT 291 (535)
Q Consensus 215 aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~ 291 (535)
+||+||+|||+.+|.++. .++.++|.++|+|+|++|+|+|+. +.++.|++ .++.|.||||+.+|+.|++.++++
T Consensus 157 aGN~Vi~Kps~~~p~~~~---~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 233 (465)
T cd07151 157 LGNAVVLKPASDTPITGG---LLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRH 233 (465)
T ss_pred cCCEEEEECCCCCcHhHH---HHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhc
Confidence 999999999999998863 134555778999999999999864 66788887 799999999999999999999999
Q ss_pred CCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 009397 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371 (535)
Q Consensus 292 ~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~ 371 (535)
++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++
T Consensus 234 ~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 313 (465)
T cd07151 234 LKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVV 313 (465)
T ss_pred CCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHH
Q 009397 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 451 (535)
Q Consensus 372 Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai 451 (535)
|||+++.++++++++|++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 314 gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 386 (465)
T cd07151 314 GPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEAL 386 (465)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEecCC-------cCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHH
Confidence 9999999999999999999999999999996 258899999999999999999999999999999999999999
Q ss_pred HHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 452 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 452 ~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ...|+ .||+||++|++|| ++|++.|++
T Consensus 387 ~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t~~k~~ 461 (465)
T cd07151 387 ELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWAL-EEFTTDKWI 461 (465)
T ss_pred HHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHH-HHhhceEEE
Confidence 9999999999999999999999999999999999999976443 23456 9999999999999 589999986
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=738.74 Aligned_cols=463 Identities=25% Similarity=0.323 Sum_probs=423.4
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
.+||+|+|+.+.+++.++++||.||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999877677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+|||+.++. .|+..+++.++|++...+...... .+.. ..+...+++++|+|||++|+|||||+...++++
T Consensus 82 ~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 157 (477)
T TIGR01722 82 ELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGET-STQV--ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMF 157 (477)
T ss_pred HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEEcccceEEEEccCChHHHHHHHHH
Confidence 999999999999995 899999999999987766543221 1110 012345678999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|+.+.++.|+. .++.|+||||+.+|+.|.+.
T Consensus 158 ~~ALaaGN~VilKps~~~p~~~~~l~~~----l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~ 233 (477)
T TIGR01722 158 PIAIACGNTFVLKPSEKVPSAAVKLAEL----FSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT 233 (477)
T ss_pred HHHHhcCCEEEeeCcccChHHHHHHHHH----HHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999876554 66799999999999997777888887 89999999999999999999
Q ss_pred HhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCC
Q 009397 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (535)
Q Consensus 288 aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (535)
+++++||+++|+|||||+||++|||++.+++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++
T Consensus 234 a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~ 312 (477)
T TIGR01722 234 GSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDP 312 (477)
T ss_pred HHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCH
Q 009397 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (535)
Q Consensus 368 ~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 447 (535)
+++||||+++.++++++++|++|+++|+++++||.....+....|+|++|||+.+++++|.++++|+||||++|++|+|+
T Consensus 313 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~ 392 (477)
T TIGR01722 313 GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTL 392 (477)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCH
Confidence 99999999999999999999999999999999998654333356899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC--CcCcHHHhhccCceee
Q 009397 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD--EFDSVHVILNDPTKLK 520 (535)
Q Consensus 448 ~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G--~~~g~~gl~~~~~~~k 520 (535)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..... ...|+ .||+| +++|.+|+ .+|++.|
T Consensus 393 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l-~~~~~~k 471 (477)
T TIGR01722 393 EEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGT-HFYTRGK 471 (477)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHH-HHhcCee
Confidence 99999999999999999999999999999999999999999854333 23356 99999 58899999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 472 ~i 473 (477)
T TIGR01722 472 TV 473 (477)
T ss_pred EE
Confidence 86
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-90 Score=740.78 Aligned_cols=462 Identities=19% Similarity=0.243 Sum_probs=410.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHH-hHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.++||+|+|+.+. +.+++++||+||+++++++.++ +|+++||++|++| |+.|+++|+.+|+++|+++++.|++++++
T Consensus 1 ~~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~ 78 (513)
T cd07128 1 LQSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKED 78 (513)
T ss_pred CceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999998764 5789999999999999999876 8999999999998 79999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcc-------cCCCccccc-ccceeeeec-ceEEEEEcCC
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY-------RSSGRSMIH-KKAKVEFHP-LGVVGAIVSW 198 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~-------~~~~~~~~~-~~~~~~~~P-lGVv~~i~p~ 198 (535)
|+++ ++|+|||+.++. .|+..+++.++|+++.++++..+.. .+... .. ...+++++| +|||++|+||
T Consensus 79 la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~~GVv~~I~pw 154 (513)
T cd07128 79 LYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSK--DGTFVGQHILTPRRGVAVHINAF 154 (513)
T ss_pred HHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCC--CccccceEEEEecccEEEEECCc
Confidence 9996 999999999995 7999999999999998877653211 11100 01 134678999 5999999999
Q ss_pred chhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCc-cchhhhhccccEEEEeC
Q 009397 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVG 276 (535)
Q Consensus 199 n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~G 276 (535)
|||+...++++++||++||+||+|||+.+|+++.++.++ +.++| +|+|++|+|+|+. +.+..+ ..+++|+|||
T Consensus 155 N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~eaG~lP~gv~~~v~g~~~~~~~~l-~~~d~v~fTG 229 (513)
T cd07128 155 NFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKD----IVESGLLPEGALQLICGSVGDLLDHL-GEQDVVAFTG 229 (513)
T ss_pred ccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHH----HHHhCCCCCCcEEEecCChHHHhccc-CCCCEEEEEC
Confidence 999999999999999999999999999999999887776 45689 9999999999864 333332 2789999999
Q ss_pred ChHHHHHHHHHH--hccCCceeeccCCcceEEEecCCC-----HHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHH
Q 009397 277 SPGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349 (535)
Q Consensus 277 S~~~g~~v~~~a--a~~~~pv~~elgGk~p~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~ 349 (535)
|+++|++|++.+ +++++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+
T Consensus 230 S~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~ 309 (513)
T cd07128 230 SAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVI 309 (513)
T ss_pred CHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHH
Confidence 999999999985 488999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCC---CCCCCCCceeccEEEEcCCCC
Q 009397 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNHT 426 (535)
Q Consensus 350 ~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~---~~~~~~g~~~~Ptvl~~v~~~ 426 (535)
++|+++++++++|+|.++++++|||+++.++++++++|++|+++ |++++||.+.. .+.+..|+|++|||+.+++++
T Consensus 310 ~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~ 388 (513)
T cd07128 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPD 388 (513)
T ss_pred HHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCc
Confidence 99999999999999999999999999999999999999999988 99999997542 112346899999999999874
Q ss_pred --CcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC--cceEEECCCCc---------c
Q 009397 427 --MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS---------N 493 (535)
Q Consensus 427 --~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~--~G~v~IN~~~~---------~ 493 (535)
|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++++++ +|+|+||+... .
T Consensus 389 ~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~ 468 (513)
T cd07128 389 AATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSP 468 (513)
T ss_pred ccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCC
Confidence 8999999999999999999999999999999999999999999999999999997 99999998642 1
Q ss_pred ccCCCC----CCCCCCc-CcHHHhhccCceeeeec
Q 009397 494 YMCQVF----KCIFDEF-DSVHVILNDPTKLKMLP 523 (535)
Q Consensus 494 ~~~~~~----~SG~G~~-~g~~gl~~~~~~~k~~~ 523 (535)
....|+ .||+||+ +|.+|+ +.|++.|++-
T Consensus 469 ~~~~pfGG~k~SG~G~~~gg~~~l-~~~~~~k~v~ 502 (513)
T cd07128 469 LPQLVHGGPGRAGGGEELGGLRGV-KHYMQRTAVQ 502 (513)
T ss_pred CCCCCCCCcccCCCCcccccHHHH-HHhheeeeee
Confidence 112234 8999999 479999 5899999983
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=738.57 Aligned_cols=463 Identities=27% Similarity=0.437 Sum_probs=425.3
Q ss_pred cccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
+||+|+|..+.++++++++||+| ++++++++.++.+|+++++++|++|+..|+++|..+|.++|+++++.|.+++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899998776678999999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||++.++. .|+..+++.+++++...++... ...+.. +.....+++++|+|||++|+|||||+...++++
T Consensus 81 ~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 156 (478)
T cd07131 81 RLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFG-ETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKI 156 (478)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCC-cccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHH
Confidence 999999999999995 7999999999999988776432 222221 122346789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|++++.+ +.++.|+. +++.|+||||+.+|+.|++
T Consensus 157 ~~ALaaGN~VvlKps~~~p~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 232 (478)
T cd07131 157 FPALVCGNTVVFKPAEDTPACALKLVEL----FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGE 232 (478)
T ss_pred HHHHHcCCEEEEECCCcCcHHHHHHHHH----HHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999877666 567999999999999866 47888887 8999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (535)
.++++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|.++++++++|+|.+
T Consensus 233 ~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 312 (478)
T cd07131 233 TCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLD 312 (478)
T ss_pred HHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCC
Q 009397 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (535)
Q Consensus 367 ~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 446 (535)
+++++||++++.++++++++|++|+++|+++++||.+...+....|+|++|||+.+++++|+++++|+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 392 (478)
T cd07131 313 EETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392 (478)
T ss_pred CCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999999999865433335789999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC-CcCcHHHhhccCceee
Q 009397 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD-EFDSVHVILNDPTKLK 520 (535)
Q Consensus 447 ~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G-~~~g~~gl~~~~~~~k 520 (535)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+..... ...|+ .||+| +++|.+|+ ++|++.|
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~-~~f~~~k 471 (478)
T cd07131 393 LEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTAL-DAFTEWK 471 (478)
T ss_pred HHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHH-HHhhheE
Confidence 999999999999999999999999999999999999999999976542 23345 89999 88999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 472 ~i 473 (478)
T cd07131 472 AV 473 (478)
T ss_pred EE
Confidence 87
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=738.53 Aligned_cols=457 Identities=23% Similarity=0.370 Sum_probs=416.2
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
++||+|+|..+. ++.++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecCC-CCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 478999998763 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||+..++. .|+..+++.++++++...++..+.. .. ..+...+++++|+|||++|+|||||+....+++
T Consensus 81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 155 (487)
T PRK09457 81 EVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKR-SE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHI 155 (487)
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcee-cc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHH
Confidence 999999999999995 7999999999998877665543322 11 123456889999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
++||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|+.+.++.|+. .+++|.||||+++|+.|++.
T Consensus 156 ~~ALaaGN~VvlKPs~~tp~t~~~l~~l----~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 231 (487)
T PRK09457 156 VPALLAGNTVVFKPSELTPWVAELTVKL----WQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQ 231 (487)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999877776 45699999999999997678888887 89999999999999999998
Q ss_pred Hhcc-CCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccH-HHHHHHHHHHHhcccCCCCC
Q 009397 288 ASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 288 aa~~-~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~ 365 (535)
++++ .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|.
T Consensus 232 aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~ 311 (487)
T PRK09457 232 FAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWD 311 (487)
T ss_pred HhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCC
Confidence 7755 578899999999999999999999999999999999999999999999999998 99999999999999999996
Q ss_pred -CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 366 -AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 366 -~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
++.+++|||++..+++++++++++++++|+++++||... ...|+|++|||+ +++++|++++||+||||++|++|
T Consensus 312 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~ 386 (487)
T PRK09457 312 AEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRY 386 (487)
T ss_pred cCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEe
Confidence 788999999999999999999999999999999998643 135789999999 79999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCCCcCcHHHhhccCcee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~~~~~~~ 519 (535)
+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+...... ..|+ .||+||++|..++ +|++.
T Consensus 387 ~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~--~~~~~ 464 (487)
T PRK09457 387 DDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYAA--DYCAY 464 (487)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhHh--hheee
Confidence 999999999999999999999999999999999999999999998754332 3456 9999999996665 48998
Q ss_pred eeec
Q 009397 520 KMLP 523 (535)
Q Consensus 520 k~~~ 523 (535)
|...
T Consensus 465 k~~~ 468 (487)
T PRK09457 465 PMAS 468 (487)
T ss_pred eEEE
Confidence 8874
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=738.90 Aligned_cols=459 Identities=27% Similarity=0.459 Sum_probs=423.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
+.+||+|+|..+.+++.++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|+++++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 99 (494)
T PRK09847 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE 99 (494)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3578999998877788999999999999999999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+|||+.++...|+..+++.++|+++..+++..... +.. .+...+++++|+|||++|+|||||+..++
T Consensus 100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVA-TTS---SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cCC---CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 99999999999999988667999999999999998877644321 111 12345789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|.++..++++ |.++|+|+|++|+|+|.+ +.++.|+. .+|.|+||||+.+|+.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~----~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~ 251 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGL----AKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQ 251 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHH----HHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999877765 567999999999999865 66788877 8999999999999999
Q ss_pred HHHHHh-ccCCceeeccCCcceEEEecCC-CHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 284 IMRNAS-KTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 284 v~~~aa-~~~~pv~~elgGk~p~iV~~da-Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
|.+.++ ++++|+++|+|||||+||++|+ |++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 252 v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 331 (494)
T PRK09847 252 LLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQP 331 (494)
T ss_pred HHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 999988 5899999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++||++++.++++++++|++++++| ++++||.. ...+.|++|||+.+++++|++++||+||||++|
T Consensus 332 g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~-----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 405 (494)
T PRK09847 332 GHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRN-----AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVV 405 (494)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCcc-----CCCCceEeeEEEeCCCCCChHHhCcCcCceEEE
Confidence 999999999999999999999999999999999 99999974 135779999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|++|||+++|+++|||+++|||+|.+++.++++++++|+|+||++.......|+ .||+|+++|.+|| ++|+
T Consensus 406 ~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~ft 484 (494)
T PRK09847 406 TRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL-EKFT 484 (494)
T ss_pred EecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999997655444456 9999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|.+
T Consensus 485 ~~k~v 489 (494)
T PRK09847 485 ELKTI 489 (494)
T ss_pred ceEEE
Confidence 99987
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-89 Score=741.05 Aligned_cols=461 Identities=25% Similarity=0.371 Sum_probs=423.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
..+.+||+|+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 31 REYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 34568999999863 57899999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++. .|+..+++.++|+++.++++ .....+.. .+....++++|+|||++|+|||||+...
T Consensus 109 ~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 183 (512)
T cd07124 109 FELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRL-RGFPVEMV---PGEDNRYVYRPLGVGAVISPWNFPLAIL 183 (512)
T ss_pred HHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCccccCC---CCceeEEEEecceEEEEECCCChHHHHH
Confidence 9999999999999999995 69999999999999988776 22222211 2345688999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|+. +.++.|+. ++++|.||||+.+|+
T Consensus 184 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~ 259 (512)
T cd07124 184 AGMTTAALVTGNTVVLKPAEDTPVIAAKLVEI----LEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGL 259 (512)
T ss_pred HHHHHHHHHcCCEEEEECCccccHHHHHHHHH----HHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHH
Confidence 99999999999999999999999999877766 566999999999999965 56788887 899999999999999
Q ss_pred HHHHHHhc------cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH
Q 009397 283 MIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (535)
Q Consensus 283 ~v~~~aa~------~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~ 356 (535)
.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|++++
T Consensus 260 ~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 339 (512)
T cd07124 260 RIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERT 339 (512)
T ss_pred HHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHH
Confidence 99999987 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccc
Q 009397 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436 (535)
Q Consensus 357 ~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fg 436 (535)
+++++|+|.++++++||++++.++++++++|+++++ |+++++||..... .+.|+|++|||+.+++++|++++||+||
T Consensus 340 ~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg 416 (512)
T cd07124 340 KALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFG 416 (512)
T ss_pred HhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcC
Confidence 999999999999999999999999999999999998 8999999985322 1468999999999999999999999999
Q ss_pred ceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-CcCcH
Q 009397 437 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD-EFDSV 509 (535)
Q Consensus 437 Pvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G-~~~g~ 509 (535)
||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+...... ..|+ .||+| +.+|.
T Consensus 417 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~ 496 (512)
T cd07124 417 PVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGP 496 (512)
T ss_pred CeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcH
Confidence 99999999999999999999999999999999999999999999999999999764442 2356 89999 88999
Q ss_pred HHhhccCceeeee
Q 009397 510 HVILNDPTKLKML 522 (535)
Q Consensus 510 ~gl~~~~~~~k~~ 522 (535)
+|+ +.|++.|.+
T Consensus 497 ~~~-~~~t~~k~v 508 (512)
T cd07124 497 DYL-LQFMQPKTV 508 (512)
T ss_pred HHH-HHhccEEEE
Confidence 999 589999987
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-89 Score=738.92 Aligned_cols=460 Identities=24% Similarity=0.377 Sum_probs=421.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
....+||+|+|+.+ +.+++++||+ ||+++++++.++.+|++.++++|++|++.|+++|.++|.++|+++++.|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRR 108 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 34457999999864 4679999999 59999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++. .|+..+++.++|++++.++..+..... . ..+...+++++|+|||++|+|||||+...
T Consensus 109 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~-~--~~~~~~~~~~~P~GVV~~I~P~N~P~~~~ 184 (511)
T TIGR01237 109 HELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGVNL-D--IEGETNRYFYQPRGVAVVISPWNFPMAIA 184 (511)
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccC-C--CCCceeEEEEecceeEEEECCCCcHHHHH
Confidence 9999999999999999985 799999999999999888765432111 1 12345688899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|.. +.++.|+. .++.|+||||+.+|+
T Consensus 185 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~ 260 (511)
T TIGR01237 185 VGMTVAPIVTGNCVVLKPAETSTVIAAKIVEI----LIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGC 260 (511)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHH
Confidence 99999999999999999999999999877766 556999999999999964 67888887 899999999999999
Q ss_pred HHHHHHh------ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH
Q 009397 283 MIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (535)
Q Consensus 283 ~v~~~aa------~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~ 356 (535)
.|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.+++
T Consensus 261 ~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~ 340 (511)
T TIGR01237 261 RIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEAT 340 (511)
T ss_pred HHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHH
Confidence 9999887 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccc
Q 009397 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436 (535)
Q Consensus 357 ~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fg 436 (535)
+++++|+|.++++++||++++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||
T Consensus 341 ~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~Fg 415 (511)
T TIGR01237 341 RSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDA----PSEGYFIGPTIFKDVDRHARLAQEEIFG 415 (511)
T ss_pred HhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccC----CCCCeEEcCEEEeCCCCCChHhhCCCcC
Confidence 99999999999999999999999999999999999999 899998631 2368999999999999999999999999
Q ss_pred ceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCCC-cCcH
Q 009397 437 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFDE-FDSV 509 (535)
Q Consensus 437 Pvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G~-~~g~ 509 (535)
||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...... ..|+ .||+|+ .+|.
T Consensus 416 PVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~ 495 (511)
T TIGR01237 416 PVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGP 495 (511)
T ss_pred CeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCH
Confidence 99999999999999999999999999999999999999999999999999999755432 2456 999995 7999
Q ss_pred HHhhccCceeeee
Q 009397 510 HVILNDPTKLKML 522 (535)
Q Consensus 510 ~gl~~~~~~~k~~ 522 (535)
+|+ ++|++.|++
T Consensus 496 ~~l-~~~~~~k~v 507 (511)
T TIGR01237 496 DYL-LQFMQPKTV 507 (511)
T ss_pred HHH-HHhcceEEE
Confidence 999 589999987
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-89 Score=732.53 Aligned_cols=444 Identities=28% Similarity=0.438 Sum_probs=409.8
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..++ .+|
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~e 79 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAM-LGD 79 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999998 589
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++|+++..++. .....+.. .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~a~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~ 155 (456)
T cd07107 80 VMVAAALLDYFAGLVTEL-KGETIPVG---GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQA 155 (456)
T ss_pred HHHHHHHHHHHHHHHHHh-CCccccCC---CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCC
Confidence 999999999998766543 32222222 12346788999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcce
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p 304 (535)
|+++.++.+++++ ++|+|++|+++++. +.++.|++ .+++|.||||+++|++|++.++++++|+++|+|||||
T Consensus 156 p~~~~~l~~~~~~-----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p 230 (456)
T cd07107 156 PLSALRLAELARE-----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230 (456)
T ss_pred hHHHHHHHHHHHH-----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCe
Confidence 9999988887654 38999999999866 46788887 7999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHH-HHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHH
Q 009397 305 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (535)
Q Consensus 305 ~iV~~daDl~~aa~~i~~~~-f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l 383 (535)
+||++|+|++.|++.+++|+ |.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 231 ~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v 310 (456)
T cd07107 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRV 310 (456)
T ss_pred EEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHH
Confidence 99999999999999999995 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEE
Q 009397 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (535)
Q Consensus 384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a 463 (535)
+++|++|+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 311 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a 390 (456)
T cd07107 311 MHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTA 390 (456)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceE
Confidence 99999999999999999976444334578999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 464 svfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|||+|.++++++++++++|+|+||+........|| .||+|+++|++|+ ++|++.|.+
T Consensus 391 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~-~~~~~~k~v 452 (456)
T cd07107 391 AIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEEL-LSYTQEKNV 452 (456)
T ss_pred EEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHH-HHhhceEEE
Confidence 999999999999999999999999998655544456 9999999999999 578999886
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-89 Score=732.25 Aligned_cols=448 Identities=29% Similarity=0.461 Sum_probs=411.6
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WD 79 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999985 69
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++|+++..+++.............+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~ 159 (456)
T cd07110 80 VDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELT 159 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccc
Confidence 99999999999988876532111111111123457889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcce
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p 304 (535)
|+++..+.+++ .++|+|+|++|+|+|.. +.++.|++ ++++|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus 160 p~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~ 235 (456)
T cd07110 160 SLTELELAEIA----AEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSP 235 (456)
T ss_pred hHHHHHHHHHH----HHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCe
Confidence 99998877764 56999999999999965 57788887 7999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHH
Q 009397 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (535)
Q Consensus 305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~ 384 (535)
+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++
T Consensus 236 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 315 (456)
T cd07110 236 IIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVL 315 (456)
T ss_pred eEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEE
Q 009397 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (535)
Q Consensus 385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~as 464 (535)
+++++++.+||++++||.+... ...|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++
T Consensus 316 ~~v~~a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 393 (456)
T cd07110 316 SFIARGKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAA 393 (456)
T ss_pred HHHHHHHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEE
Confidence 9999999999999999985332 24688999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeeec
Q 009397 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKMLP 523 (535)
Q Consensus 465 vfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~~ 523 (535)
|||+|.+.++++++++++|+|+||+........|+ .||+|+++|++|| ++|++.|++.
T Consensus 394 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~~~~k~i~ 455 (456)
T cd07110 394 VISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGL-DNYLEVKQIT 455 (456)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHH-HHhcceeEEe
Confidence 99999999999999999999999997644444456 8999999999999 5899999873
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-89 Score=737.80 Aligned_cols=462 Identities=29% Similarity=0.462 Sum_probs=422.5
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
...++.+.+ +.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|.+++++|
T Consensus 19 ~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 19 LRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 334555533 456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++ ..|+..+++.++|++.++++.+.++...... ......+++++|+|||++|+|||||+...+++
T Consensus 97 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~ 174 (524)
T PRK09407 97 LDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWNYPLTLAVSD 174 (524)
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCCChHHHHHHH
Confidence 999999999999998 5899999999999999988877654332211 11245688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhccccEEEEeCChHHHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS~~~g~~v~~~ 287 (535)
+++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|.. +.++.|+++++.|+||||+.+|++|++.
T Consensus 175 ~~~ALaaGN~VIlKPs~~tp~~~~~l~~l----l~eaGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~ 250 (524)
T PRK09407 175 AIPALLAGNAVVLKPDSQTPLTALAAVEL----LYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQ 250 (524)
T ss_pred HHHHHHcCCEEEEECCCCCHHHHHHHHHH----HHHcCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999887776 556999999999999965 6788888889999999999999999999
Q ss_pred HhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCC
Q 009397 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (535)
Q Consensus 288 aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (535)
++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 251 aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 251 AGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred HHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCH
Q 009397 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (535)
Q Consensus 368 ~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 447 (535)
++++|||+++.+++++++++++++++||++++||.+.. ...|+|++|||+.+++++|.+++||+||||++|++|+|.
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 407 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARP---DLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADV 407 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCH
Confidence 99999999999999999999999999999999997421 125789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc---ccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN---YMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 448 ~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~---~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
||||+++|+++|||++||||+|.++++++++++++|+|+||+.... ....|+ .||+|+++|.+|| ++|++.|
T Consensus 408 deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~ft~~k 486 (524)
T PRK09407 408 DEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGL-LKYTESQ 486 (524)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHH-HHhCCeE
Confidence 9999999999999999999999999999999999999999996542 112345 9999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 487 ~v 488 (524)
T PRK09407 487 TI 488 (524)
T ss_pred EE
Confidence 88
|
|
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-89 Score=729.05 Aligned_cols=443 Identities=28% Similarity=0.401 Sum_probs=409.3
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH--HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
++||+||+++++++.++.+|++++++.|++||.. |++ ++.+|.++|+++++.|++|+++|++++++|+|||..++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 78 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR- 78 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 4799999999999999999999999999999985 998 899999999999999999999999999999999999995
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCC
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~ 225 (535)
+|+..+++.++|+++..++...... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 ~Ev~~~i~~l~~~~~~~~~~~g~~~-~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 154 (455)
T cd07120 79 FEISGAISELRYYAGLARTEAGRMI-EP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccc-cc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCC
Confidence 7999999999999988776533211 11 1234568899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHh-cCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 226 NASWSGCFYFRIIQAALAA-VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 226 ~~~~s~~~~~~~i~~~l~~-aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
.+|+++..+.+++ .+ +|+|+|++|+|++.+ +.++.|++ +++.|.||||+.+|+.|++.+++++||+++|+||
T Consensus 155 ~~~~~~~~l~~~~----~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG 230 (455)
T cd07120 155 QTAQINAAIIRIL----AEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGG 230 (455)
T ss_pred CChHHHHHHHHHH----HHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCC
Confidence 9999998777765 45 799999999999865 67888887 8999999999999999999999999999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 231 ~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~ 310 (455)
T cd07120 231 KTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVD 310 (455)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
+++++|++++++|+++++||.+.... ...|+|++|||+.++++||+++++|+||||++|++|+|.||||+++|+++|||
T Consensus 311 ~~~~~i~~a~~~ga~~~~~g~~~~~~-~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gL 389 (455)
T cd07120 311 RVDRMVERAIAAGAEVVLRGGPVTEG-LAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGL 389 (455)
T ss_pred HHHHHHHHHHHCCCEEEeCCccCccc-CCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCc
Confidence 99999999999999999988654322 34689999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.+.+++++.++++|+|+||++.......|| .||+|+++|++|+ ++|++.|++
T Consensus 390 s~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l-~~ft~~k~v 453 (455)
T cd07120 390 AASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAAL-EDFIEYKHI 453 (455)
T ss_pred eEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHH-HHHhceeEE
Confidence 99999999999999999999999999998766555566 8999999999999 589999986
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-89 Score=732.64 Aligned_cols=459 Identities=28% Similarity=0.392 Sum_probs=418.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.+++.++++||+||+++++++.++.+|++++++.|++|++.|++++..+|.++|+++++.|+++++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 93 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA 93 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999887677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccc----ccccceeeeecceEEEEEcCCchhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVVGAIVSWNYPF 202 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~PlGVv~~i~p~n~P~ 202 (535)
+|++++++|+||+..++. .|+..+++.++|+++++.+.+..........+ ......++++|+|||++|+|||||+
T Consensus 94 el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 172 (496)
T PLN00412 94 PIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172 (496)
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchH
Confidence 999999999999999994 89999999999999887766543211100000 1123467889999999999999999
Q ss_pred hhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChH
Q 009397 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 203 ~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~ 279 (535)
...++++++||++||+||+|||+.+|.++..++++ |.++|+|++++|+++++. +.++.|+. +++.|.|||| .
T Consensus 173 ~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~----l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~ 247 (496)
T PLN00412 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHC----FHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-D 247 (496)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHH----HHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-H
Confidence 99999999999999999999999999999877765 567999999999999865 67788887 7999999999 9
Q ss_pred HHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 280 ~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++
T Consensus 248 ~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 325 (496)
T PLN00412 248 TGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKL 325 (496)
T ss_pred HHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence 9999999875 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
++|+|.+ ++++||++++.++++++++|++++.+|+++++||. ..|+|++|||+.+++++|++++||+||||+
T Consensus 326 ~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 397 (496)
T PLN00412 326 TVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVL 397 (496)
T ss_pred ccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeE
Confidence 9999976 78999999999999999999999999999999875 368999999999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhc
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~ 514 (535)
+|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.... ...|| .||+|+++|++|+ +
T Consensus 398 ~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~ 476 (496)
T PLN00412 398 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSI-N 476 (496)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHH-H
Confidence 9999999999999999999999999999999999999999999999999975332 23456 8999999999999 5
Q ss_pred cCceeeee
Q 009397 515 DPTKLKML 522 (535)
Q Consensus 515 ~~~~~k~~ 522 (535)
.|++.|.+
T Consensus 477 ~ft~~k~i 484 (496)
T PLN00412 477 MMTKVKST 484 (496)
T ss_pred HhcceEEE
Confidence 89999987
|
|
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-89 Score=728.47 Aligned_cols=444 Identities=30% Similarity=0.522 Sum_probs=410.7
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhH
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei 148 (535)
.||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++|+++|++++++|+||+..++ .+|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev 79 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA-FEEV 79 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHH
Confidence 389999999999999999999999999999999999999999999999999999999999999999999999998 5899
Q ss_pred HHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCch
Q 009397 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (535)
Q Consensus 149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~ 228 (535)
..+++.+++++.+..+++++...+.... .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p 158 (454)
T cd07101 80 LDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA 158 (454)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 9999999999999888876654433211 124568899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhccccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEE
Q 009397 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307 (535)
Q Consensus 229 ~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV 307 (535)
+++..+.++ |.++|+|+|++|+++|.. +.++.|+++++.|.||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 159 ~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV 234 (454)
T cd07101 159 LTALWAVEL----LIEAGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIV 234 (454)
T ss_pred HHHHHHHHH----HHHcCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEE
Confidence 999877766 566999999999999965 667888888899999999999999999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009397 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387 (535)
Q Consensus 308 ~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i 387 (535)
++|+|++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++++++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEec
Q 009397 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (535)
Q Consensus 388 ~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs 467 (535)
++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||
T Consensus 315 ~~a~~~Ga~vl~gg~~~~---~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 391 (454)
T cd07101 315 DDAVAKGATVLAGGRARP---DLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWT 391 (454)
T ss_pred HHHHHCCCEEEeCCCCCC---CCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 999999999999997421 13578999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCcceEEECCCCccc---cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 468 GSQHRAREIAAQIQCGVAAINDFASNY---MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 468 ~d~~~~~~~a~~l~~G~v~IN~~~~~~---~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|.++++++++++++|+|+||+..... ...|| .||+|+++|.+|| ++|++.|.+
T Consensus 392 ~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~-~~~~~~k~v 452 (454)
T cd07101 392 RDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGL-LKYTETQTV 452 (454)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHH-HHhcceEEE
Confidence 999999999999999999999975421 22345 8999999999999 579998875
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-89 Score=736.32 Aligned_cols=458 Identities=24% Similarity=0.365 Sum_probs=420.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
...+||+|+|..+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|+++++
T Consensus 36 ~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 113 (514)
T PRK03137 36 DYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKH 113 (514)
T ss_pred ccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 4457999999864 5789999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..+++ .|+..+++.++++++++.++........ ..+..++++++|+|||++|+|||||+..++
T Consensus 114 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~ 189 (514)
T PRK03137 114 EFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMA 189 (514)
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence 999999999999999995 7999999999999988877643322211 133457889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|++ +.++.|++ ++++|.||||+.+|+.
T Consensus 190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~ 265 (514)
T PRK03137 190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEV----LEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLR 265 (514)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHH
Confidence 9999999999999999999999999877765 566999999999999965 67788887 8999999999999999
Q ss_pred HHHHHhc------cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa~------~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.+++ ++||+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++
T Consensus 266 i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~ 345 (514)
T PRK03137 266 IYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTK 345 (514)
T ss_pred HHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHH
Confidence 9999986 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+|.++. ++||++++.++++++++|++++++ +++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 346 ~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgP 419 (514)
T PRK03137 346 ELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGD----DSKGYFIQPTIFADVDPKARIMQEEIFGP 419 (514)
T ss_pred hCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcC----CCCceEEeeEEEeCCCCCCHHHhCCCCCc
Confidence 99999999988 999999999999999999999987 6999999742 23689999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||+...... ..|+ .||+| +++|.+
T Consensus 420 vl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~ 499 (514)
T PRK03137 420 VVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPD 499 (514)
T ss_pred eEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHH
Confidence 9999999999999999999999999999999999999999999999999998754442 2356 89999 799999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
|| +.|++.|.+
T Consensus 500 ~l-~~ft~~k~v 510 (514)
T PRK03137 500 YL-LLFLQAKTV 510 (514)
T ss_pred HH-HHhceEEEE
Confidence 99 589999987
|
|
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-89 Score=729.35 Aligned_cols=445 Identities=31% Similarity=0.458 Sum_probs=411.2
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||+||+++++++.++.+|+++++++|++|+..|+++|..+|.++|+++++.|.+++++|++++++|+||+..++ ..|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~e 79 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEA-RVD 79 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999888 579
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++|+++..++... +..+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~ 155 (457)
T cd07090 80 IDSSADCLEYYAGLAPTLSG-EHVPLP---GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFT 155 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCC-eeeccC---CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcC
Confidence 99999999999987765322 221111 13456789999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceE
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~ 305 (535)
|+++..+.+++ .++|+|+|++|+|+++.+.++.|+. +++.|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 156 ~~~~~~l~~~~----~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~ 231 (457)
T cd07090 156 PLTALLLAEIL----TEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPL 231 (457)
T ss_pred cHHHHHHHHHH----HHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCce
Confidence 99998777664 5699999999999987777888887 79999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHH
Q 009397 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (535)
Q Consensus 306 iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~ 385 (535)
||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++.++++++++
T Consensus 232 iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 311 (457)
T cd07090 232 IIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLG 311 (457)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeccCCCCCCC-CCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEE
Q 009397 386 LVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (535)
Q Consensus 386 ~i~~a~~~Ga~~l~gG~~~~~~-~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~as 464 (535)
+|++++++|+++++||.+...+ ..+.|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++
T Consensus 312 ~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~ 391 (457)
T cd07090 312 YIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAG 391 (457)
T ss_pred HHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEE
Confidence 9999999999999999864322 124689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 465 vfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|||+|.+.++++++++++|+|+||+........|| .||+|+++|.+|+ ++|++.|.+
T Consensus 392 i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~-~~f~~~k~~ 452 (457)
T cd07090 392 VFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAAL-EHYTQLKTV 452 (457)
T ss_pred EEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHH-HHHhCeEEE
Confidence 99999999999999999999999997555444556 9999999999999 589999987
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-88 Score=726.02 Aligned_cols=448 Identities=28% Similarity=0.426 Sum_probs=413.1
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHh-hcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~-~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~ 146 (535)
++||+||+++++++.++.+|+++++++|++|++.|+ ++|..+|.++|+++++.|++++++|++++++|+||+..++...
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 9999999999999999999999999999999999999887667
Q ss_pred hHHHHHHHHHHHHHhchhhcCCcccCCCc-ccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCC
Q 009397 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (535)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~ 225 (535)
|+..+++.+++++++.+++..+...+... .......+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999887765443222211 11234568999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCc
Q 009397 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (535)
Q Consensus 226 ~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk 302 (535)
.+|.++..+.++ |.++|+|+|++|+++|.. +.+..|+. +++.|.||||+.+|+.|++.+++++||+++|+|||
T Consensus 161 ~~p~~~~~l~~~----~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~ 236 (459)
T cd07089 161 DTPLSALLLGEI----IAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGK 236 (459)
T ss_pred CChHHHHHHHHH----HHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 999999877666 456999999999999976 46788887 89999999999999999999999999999999999
Q ss_pred ceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 303 ~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
||+||++|+|++.+++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 237 n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~ 316 (459)
T cd07089 237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDR 316 (459)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcE
Q 009397 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (535)
Q Consensus 383 l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 462 (535)
+++++++++++|+++++||..... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 317 v~~~i~~a~~~Ga~~l~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~ 394 (459)
T cd07089 317 VEGYIARGRDEGARLVTGGGRPAG--LDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLS 394 (459)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCe
Confidence 999999999999999999975321 247899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.+.++++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|++
T Consensus 395 ~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l-~~ft~~k~v 457 (459)
T cd07089 395 GGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGL-EEFLETKSI 457 (459)
T ss_pred EEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHH-HHhhceeEE
Confidence 9999999999999999999999999997655444456 8999999999999 589999876
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=726.07 Aligned_cols=442 Identities=22% Similarity=0.328 Sum_probs=407.0
Q ss_pred EeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH-HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
+++||+||+++++++.++.+|+++++++|++||+. |+.+|..+|.++|+++++.|++++++|++++++|+||+..++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 80 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK- 80 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 57899999999999999999999999999999998 5679999999999999999999999999999999999999995
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCc--ccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEec
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kp 223 (535)
.|+..+++.++|++++.+++.+... +.+. ...+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 81 ~ev~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKp 159 (455)
T cd07148 81 VEVTRAIDGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKP 159 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeC
Confidence 7999999999999998877644322 1111 012344678999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 224 s~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
|+.+|+++..+++++ .++|+|+|++|+++++.+.++.|++ ++++|.||||+.+|+.|++.++. .+|+++|+||
T Consensus 160 s~~~p~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG 234 (455)
T cd07148 160 ALATPLSCLAFVDLL----HEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGG 234 (455)
T ss_pred CCcccHHHHHHHHHH----HHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCC
Confidence 999999998877765 5699999999999997778888877 89999999999999999998876 5999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|+|++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 235 ~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 314 (455)
T cd07148 235 AAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVD 314 (455)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
+++++|++++++|+++++||.+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 315 ~~~~~i~~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL 388 (455)
T cd07148 315 RVEEWVNEAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAF 388 (455)
T ss_pred HHHHHHHHHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999973 3478999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.+.+.++++++++|+|+||+...+.. ..|+ .||+|+++|.+|+ +.|++.|++
T Consensus 389 ~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~-~~~~~~k~~ 453 (455)
T cd07148 389 QAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTM-HDMTQEKMA 453 (455)
T ss_pred eEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHH-HHhhceeEE
Confidence 9999999999999999999999999999754332 2356 8999999999999 579999876
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-89 Score=735.35 Aligned_cols=454 Identities=32% Similarity=0.523 Sum_probs=418.1
Q ss_pred ccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 009397 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136 (535)
Q Consensus 57 ~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~et 136 (535)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 555554 7799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcC
Q 009397 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 216 (535)
Q Consensus 137 Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aG 216 (535)
||+..+++ .|+..+++.+++++++.++ +..+..+.. .+....++++|+|||++|+|||||+..+++++++||++|
T Consensus 80 Gk~~~~a~-~ev~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaG 154 (462)
T PF00171_consen 80 GKPIAEAR-GEVDRAIDFLRYYADAARK-LAGEVLPSD---PGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAG 154 (462)
T ss_dssp TSSHHHHH-HHHHHHHHHHHHHHHHHHH-HTEEEEEES---TTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT
T ss_pred cccccccc-chhhhhhhhhhhhhhcccc-eehhhcccc---cccccccccccccceeecccccccccccccchhhhhccc
Confidence 99999996 5999999999999999887 333332222 456788999999999999999999999999999999999
Q ss_pred CEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCC
Q 009397 217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293 (535)
Q Consensus 217 N~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~ 293 (535)
|+||+|||+.+|.++.++.+++ .++|+|+|++|+++|.. +.+..|+. +++.|.||||+++++.|.+.++++++
T Consensus 155 N~VVlkps~~~~~~~~~l~~~~----~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 230 (462)
T PF00171_consen 155 NTVVLKPSEQAPLTALLLAELL----EEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLK 230 (462)
T ss_dssp -EEEEEEBTTSHHHHHHHHHHH----HHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTS
T ss_pred ccceeeeccccccccccchhhc----cccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccc
Confidence 9999999999999998777775 45799999999999955 77888887 99999999999999999999999999
Q ss_pred ceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccc
Q 009397 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (535)
Q Consensus 294 pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gp 373 (535)
|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 231 ~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gp 310 (462)
T PF00171_consen 231 PVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGP 310 (462)
T ss_dssp EEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCH
T ss_pred cccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHH
Q 009397 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (535)
Q Consensus 374 li~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 453 (535)
+++..++++++++|++++++||++++||. ........|+|++|||+.+++++|+++++|+||||++|++|+|.+|||++
T Consensus 311 l~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 389 (462)
T PF00171_consen 311 LISKAQRERVKALIEDAVAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIAL 389 (462)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHH
T ss_pred cccchhhhhcccccccccccccccccccc-cccccccccccccccccccccccccccccccccccceecccccchhhhhc
Confidence 99999999999999999999999999995 33334678999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCC-CC----CCCCCCcCcHHHhhccCceeeee
Q 009397 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ-VF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 454 ~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~-~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|+++|||+++|||+|.++++++++++++|+|+||++....... |+ .||+|+++|.+|| .+|++.|++
T Consensus 390 ~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l-~~~~~~k~V 462 (462)
T PF00171_consen 390 ANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGL-DEFTQIKTV 462 (462)
T ss_dssp HHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHH-HGTEEEEEE
T ss_pred ccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHH-HHhCCccCC
Confidence 99999999999999999999999999999999999997766655 56 9999999999999 489999985
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-88 Score=729.40 Aligned_cols=465 Identities=22% Similarity=0.345 Sum_probs=424.4
Q ss_pred CCCCCcccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHH
Q 009397 44 QTPDNSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII 122 (535)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~ 122 (535)
+....+.+||+|+|+.+ +..++++||. ||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|+
T Consensus 14 ~~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 91 (500)
T cd07083 14 EFGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLR 91 (500)
T ss_pred hccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 33455667899999864 5679999997 69999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhh
Q 009397 123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202 (535)
Q Consensus 123 ~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~ 202 (535)
+++++|++++++|+||++.++ ..|+..+++.++++++.++++......... ..+....++++|+|||++|+|||||+
T Consensus 92 ~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~ 168 (500)
T cd07083 92 RRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPV 168 (500)
T ss_pred hCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHH
Confidence 999999999999999999997 589999999999999988776543221111 12345678899999999999999999
Q ss_pred hhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChH
Q 009397 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 203 ~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~ 279 (535)
...++++++||++||+||+|||+.+|+++..++++ |.++|+|+|++|+|+|++ +.++.|++ .+++|+||||+.
T Consensus 169 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~----~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~ 244 (500)
T cd07083 169 AIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEI----FHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLE 244 (500)
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHH----HHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHH
Confidence 99999999999999999999999999999887776 456999999999999964 67888887 999999999999
Q ss_pred HHHHHHHHHhccC------CceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHH
Q 009397 280 VGRMIMRNASKTL------TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353 (535)
Q Consensus 280 ~g~~v~~~aa~~~------~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~ 353 (535)
+|+.|++.+++++ +|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+
T Consensus 245 ~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 324 (500)
T cd07083 245 TGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLL 324 (500)
T ss_pred HHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHH
Confidence 9999999999886 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccc
Q 009397 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433 (535)
Q Consensus 354 ~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E 433 (535)
++++++++|+|.++++++||++++.++++++++|++++++| ++++||.... ..|+|++|||+.+++++|++++||
T Consensus 325 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE 399 (500)
T cd07083 325 KRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLE----GEGYFVAPTVVEEVPPKARIAQEE 399 (500)
T ss_pred HHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCC----CCCeEEccEEEeCCCCCChHhhCC
Confidence 99999999999999999999999999999999999999987 9999997421 358999999999999999999999
Q ss_pred cccceeeeeecC--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-
Q 009397 434 AFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD- 504 (535)
Q Consensus 434 ~fgPvl~v~~~~--~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G- 504 (535)
+||||++|++|+ |++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+...... ..|+ .||+|
T Consensus 400 ~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 479 (500)
T cd07083 400 IFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA 479 (500)
T ss_pred CCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC
Confidence 999999999999 99999999999999999999999999999999999999999999865543 3356 89999
Q ss_pred CcCcHHHhhccCceeeeec
Q 009397 505 EFDSVHVILNDPTKLKMLP 523 (535)
Q Consensus 505 ~~~g~~gl~~~~~~~k~~~ 523 (535)
+++|.+|+ +.|++.|++.
T Consensus 480 ~~~g~~~l-~~~~~~k~~~ 497 (500)
T cd07083 480 KTGGPHYL-RRFLEMKAVA 497 (500)
T ss_pred cccCHHHH-HHhhheeEEE
Confidence 68999999 5899999873
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-88 Score=724.71 Aligned_cols=444 Identities=32% Similarity=0.492 Sum_probs=407.3
Q ss_pred EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..+++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 79 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR- 79 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCc--ccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEec
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kp 223 (535)
.|+..+++.++++++..+.. ..+..+... .......+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 80 ~ev~~~~~~l~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 158 (456)
T cd07145 80 VEVERTIRLFKLAAEEAKVL-RGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKP 158 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 79999999999999876543 322211110 001234567899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccC
Q 009397 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (535)
Q Consensus 224 s~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg 300 (535)
|+.+|+++..+.+++ .++|+|+|++|+++|+. +.++.|++ +++.|.||||+.+|+.|++.++++++|+++|+|
T Consensus 159 s~~~p~~~~~l~~~~----~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElg 234 (456)
T cd07145 159 SSNTPLTAIELAKIL----EEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELG 234 (456)
T ss_pred CccchHHHHHHHHHH----HHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecC
Confidence 999999998777664 56899999999999964 66788887 899999999999999999999999999999999
Q ss_pred CcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHH
Q 009397 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (535)
Q Consensus 301 Gk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~ 380 (535)
||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++
T Consensus 235 G~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (456)
T cd07145 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAV 314 (456)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCC
Q 009397 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (535)
Q Consensus 381 ~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 460 (535)
++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++||
T Consensus 315 ~~~~~~i~~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 388 (456)
T cd07145 315 ERMENLVNDAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYG 388 (456)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCC
Confidence 99999999999999999999973 238999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|++||||+|.+.++++++++++|+|+||+...+. ...|+ .||+|+++|++|| ++|++.|.+
T Consensus 389 L~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l-~~f~~~k~v 454 (456)
T cd07145 389 LQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTM-LEMTEEKTI 454 (456)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHH-HHhhceeEE
Confidence 9999999999999999999999999999875432 23456 8999999999999 578988876
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-88 Score=723.59 Aligned_cols=452 Identities=23% Similarity=0.385 Sum_probs=410.5
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
-++|+|+|... ++.++++||+||+++++++.++.+|+++++++|++|+ +.++..+|.++|+++++.|++++++|+
T Consensus 5 ~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 36889998753 5789999999999999999999999999999998876 578999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCc--ccccccceeeeecc-eEEEEEcCCchhhhhhH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~Pl-GVv~~i~p~n~P~~~~~ 206 (535)
+++++|+||+..++. .|+..+++.++|+++...+...... +... .......+++++|+ |||++|+|||||+...+
T Consensus 80 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~ 157 (472)
T TIGR03250 80 DLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIF-SCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVA 157 (472)
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHH
Confidence 999999999999985 7999999999999988765432211 1100 00123457889998 99999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+|+|.+ +.++.|++ +++.|+||||+.+|+.
T Consensus 158 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~ 233 (472)
T TIGR03250 158 HKIAPAIATNNRMVVKPSEKTPLSALYLADI----LYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKY 233 (472)
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHH----HHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 9999999999999999999999999877665 566999999999999864 67888887 9999999999999999
Q ss_pred HHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCC
Q 009397 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 284 v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (535)
|++.++ ++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 234 i~~~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 311 (472)
T TIGR03250 234 IAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGD 311 (472)
T ss_pred HHHHhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence 999875 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
|.++++++|||+++.+++++++++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 312 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~ 384 (472)
T TIGR03250 312 PMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV-------RDGALYAPTVLDRVDPSMTLVREETFGPVSPVIR 384 (472)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC-------cCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEE
Confidence 999999999999999999999999999999999999997 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCC-CcCcHHHhhccCc
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFD-EFDSVHVILNDPT 517 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G-~~~g~~gl~~~~~ 517 (535)
|+|.+|||+++|+++|||++||||+|.+++.++++++++|+|+||+...... ..|+ .||+| +.+|.+|| ++|+
T Consensus 385 ~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l-~~ft 463 (472)
T TIGR03250 385 FCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAM-KSFT 463 (472)
T ss_pred eCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999998764332 2456 99999 66778999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|.+
T Consensus 464 ~~k~i 468 (472)
T TIGR03250 464 NLKTY 468 (472)
T ss_pred ceEEE
Confidence 99987
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-88 Score=723.06 Aligned_cols=444 Identities=35% Similarity=0.574 Sum_probs=413.4
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhH
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei 148 (535)
+||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+||+..++ ..|+
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ev 79 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADA-GLEV 79 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999977 5799
Q ss_pred HHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCch
Q 009397 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (535)
Q Consensus 149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~ 228 (535)
..+++.++++++...+++..+..+......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p 159 (453)
T cd07099 80 LLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTP 159 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 99999999999988887665433322212345678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEE
Q 009397 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307 (535)
Q Consensus 229 ~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV 307 (535)
+++.++.++ |.++|+|+|++|+++|+.+.+..|++ .+|+|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~~~l~~~----l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV 235 (453)
T cd07099 160 LVGELLAEA----WAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235 (453)
T ss_pred HHHHHHHHH----HHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEE
Confidence 999877666 55699999999999997777888888 7999999999999999999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009397 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387 (535)
Q Consensus 308 ~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i 387 (535)
++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++++++
T Consensus 236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i 315 (453)
T cd07099 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV 315 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEec
Q 009397 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (535)
Q Consensus 388 ~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs 467 (535)
++++++|+++++||.+.. ..|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||
T Consensus 316 ~~a~~~ga~~~~gg~~~~----~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 391 (453)
T cd07099 316 DDAVAKGAKALTGGARSN----GGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFS 391 (453)
T ss_pred HHHHhCCCEEEeCCCcCC----CCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEc
Confidence 999999999999998531 4689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 468 GSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 468 ~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|.+.++++++++++|+|+||+...+.. ..|+ .||+|+++|.+|| ++|++.|++
T Consensus 392 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~-~~~t~~k~v 451 (453)
T cd07099 392 RDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGL-REFCRPKAI 451 (453)
T ss_pred CCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHH-HHhcceEEE
Confidence 9999999999999999999999865442 3455 8999999999999 589999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-88 Score=746.43 Aligned_cols=458 Identities=21% Similarity=0.264 Sum_probs=406.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHH-hHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.++||+|+|+.+. ++.++++||+||+++++++.++ +|+++||++|++| |+.|+++|..+|.++|+++++.|++++++
T Consensus 1 ~~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 78 (663)
T TIGR02278 1 LQSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEA 78 (663)
T ss_pred CceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999998764 5689999999999999999999 6999999999996 99999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCc-------ccCCCcccccccceeeeecc-eEEEEEcCCc
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE-------YRSSGRSMIHKKAKVEFHPL-GVVGAIVSWN 199 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~n 199 (535)
|++ +++|+|||+.++. .|+..+++.++|+++.+++.+.+. ..+... ......+++++|+ |||++|+|||
T Consensus 79 la~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 79 LYA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSK-DGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCC-CCccceEEEEEeCCceEEEEcCCc
Confidence 999 5999999999995 799999999999999887644211 111100 0012457899998 9999999999
Q ss_pred hhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCc-cchhhhhccccEEEEeCC
Q 009397 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGS 277 (535)
Q Consensus 200 ~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS 277 (535)
||+...++++++||++||+||+|||+.+|+++.++.++ +.++| +|+|++|+|+|.. +....+ ..++.|+||||
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~----~~~aG~lP~gv~~~v~g~~~~~~~~~-~~~~~V~FTGS 230 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRT----MVESGLLPEGSLQLICGSAGDLLDHL-DHRDVVAFTGS 230 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH----HHHhCCCCCCcEEEEeCChHHHHhcC-CCCCEEEEECC
Confidence 99999999999999999999999999999999877776 45689 9999999999853 222211 27899999999
Q ss_pred hHHHHHHHHHH--hccCCceeeccCCcceEEEecCCC-----HHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHH
Q 009397 278 PGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350 (535)
Q Consensus 278 ~~~g~~v~~~a--a~~~~pv~~elgGk~p~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~ 350 (535)
+++|++|++.+ +++++|+++|||||||+||++||| ++.+++.+++|+|.|+||.|++++|||||+++||+|++
T Consensus 231 ~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~ 310 (663)
T TIGR02278 231 AATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLK 310 (663)
T ss_pred HHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHH
Confidence 99999999874 488999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCC-cc
Q 009397 351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM-KL 429 (535)
Q Consensus 351 ~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~-~i 429 (535)
+|.++++++++|+|.++++++|||+++.++++++++|++|+++|+++++||.+ ...|+|++|||+.+++++| .+
T Consensus 311 ~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-----~~~g~~~~PTvl~~~~~~~~~i 385 (663)
T TIGR02278 311 ALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG-----RLDGAFFPPTLLLAEDPWAGAV 385 (663)
T ss_pred HHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-----CCCCeeEccEEEeeCCcchhhH
Confidence 99999999999999999999999999999999999999999999999999973 2358999999999999886 79
Q ss_pred cccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--CcceEEE-CCCC------c-c-ccCCC
Q 009397 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAI-NDFA------S-N-YMCQV 498 (535)
Q Consensus 430 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l--~~G~v~I-N~~~------~-~-~~~~~ 498 (535)
++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+++++++| ++|+|+| |+.. . . ....|
T Consensus 386 ~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~p 465 (663)
T TIGR02278 386 HATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLL 465 (663)
T ss_pred HhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 8999999 6411 1 1 11123
Q ss_pred C----CCCCCCcC-cHHHhhccCceeeee
Q 009397 499 F----KCIFDEFD-SVHVILNDPTKLKML 522 (535)
Q Consensus 499 ~----~SG~G~~~-g~~gl~~~~~~~k~~ 522 (535)
+ .||+||++ |.+|+ ++|++.|++
T Consensus 466 fGG~k~SG~G~~~g~~~~l-~~f~~~k~v 493 (663)
T TIGR02278 466 HGGPGRAGGGEELGGLRSV-KHYMQRTAI 493 (663)
T ss_pred CCCCccCcCCCccchHHHH-HHhceeEEE
Confidence 4 99999994 68999 589999998
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-88 Score=720.68 Aligned_cols=438 Identities=31% Similarity=0.465 Sum_probs=406.9
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|.+|+++|++++++|+||+..++. .|
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 79 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FE 79 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999985 69
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++++++... ........ .....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~---~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~ 153 (446)
T cd07106 80 VGGAVAWLRYTASLDL---PDEVIEDD---DTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFT 153 (446)
T ss_pred HHHHHHHHHHHHhhhh---cCccccCC---CCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 9999999999887652 11111111 23456889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceE
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~ 305 (535)
|+++.++.+++++ ++|+|++|++++..+.++.|++ ++|.|.||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 154 p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~ 228 (446)
T cd07106 154 PLCTLKLGELAQE-----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAA 228 (446)
T ss_pred hHHHHHHHHHHHH-----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCee
Confidence 9999988887654 3999999999987677888887 79999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHH
Q 009397 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (535)
Q Consensus 306 iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~ 385 (535)
||++|||++.|++.+++|+|+++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus 229 iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~ 308 (446)
T cd07106 229 IVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKE 308 (446)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEE
Q 009397 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (535)
Q Consensus 386 ~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asv 465 (535)
++++++.+|+++++||.+.. ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||
T Consensus 309 ~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i 384 (446)
T cd07106 309 LVEDAKAKGAKVLAGGEPLD----GPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASV 384 (446)
T ss_pred HHHHHHHCCCEEEeCCCcCC----CCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999997421 36889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 466 fs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+|.+.++++++++++|+|+||++.......|+ .||+|+++|++|+ ++|++.|++
T Consensus 385 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~-~~~t~~k~v 444 (446)
T cd07106 385 WSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGL-KEYTQTQVI 444 (446)
T ss_pred ECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHH-HHhhceeEE
Confidence 9999999999999999999999998755555566 8999999999999 589999986
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-88 Score=724.94 Aligned_cols=455 Identities=23% Similarity=0.372 Sum_probs=412.7
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~ 130 (535)
+||+|+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4789999765 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHH
Q 009397 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (535)
Q Consensus 131 ~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~ 210 (535)
++++|+||+..++. .|+..+++.+++++.+..+........ ......+++++|+|||++|+|||||+...+++++
T Consensus 80 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~ 154 (484)
T TIGR03240 80 VIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENP----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIV 154 (484)
T ss_pred HHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccC----CCCceeEEEEecccEEEEECCCchHHHHHHHHHH
Confidence 99999999999985 899999999999887766543321111 1123457889999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHH
Q 009397 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (535)
Q Consensus 211 ~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~a 288 (535)
+||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|..+.++.|+. .+|.|+||||+++|+.|++.+
T Consensus 155 ~ALaaGN~VVlKPs~~tp~t~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~a 230 (484)
T TIGR03240 155 PALLAGNTVVFKPSELTPWVAEETVKL----WEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQF 230 (484)
T ss_pred HHHHcCCEEEEECCccccHHHHHHHHH----HHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999887776 45699999999999996677888887 899999999999999999987
Q ss_pred hcc-CCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccH-HHHHHHHHHHHhcccCCCC-C
Q 009397 289 SKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPP-L 365 (535)
Q Consensus 289 a~~-~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~-~ 365 (535)
+++ .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .
T Consensus 231 a~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~ 310 (484)
T TIGR03240 231 AGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDA 310 (484)
T ss_pred hhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCc
Confidence 765 688999999999999999999999999999999999999999999999999985 9999999999999999997 4
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++|||+++.+++++++++++++++|+++++||... ...|+|++|||+ +++++|+++++|+||||++|++|+
T Consensus 311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~ 385 (484)
T TIGR03240 311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYD 385 (484)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeC
Confidence 778899999999999999999999999999999988642 135789999999 799999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+..... ...|+ .||+|+++|.+++ +|++.|
T Consensus 386 ~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~--~~~~~~ 463 (484)
T TIGR03240 386 DFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAA--DYCAYP 463 (484)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHH--hheeee
Confidence 9999999999999999999999999999999999999999999875433 22345 9999999998887 388988
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
.+
T Consensus 464 ~~ 465 (484)
T TIGR03240 464 VA 465 (484)
T ss_pred EE
Confidence 87
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-88 Score=721.51 Aligned_cols=441 Identities=28% Similarity=0.405 Sum_probs=407.9
Q ss_pred EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+|||+.++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 79 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW- 79 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 3579999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCC
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~ 225 (535)
.|+..+++.+++++...++.... ..+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 80 ~ev~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~ 156 (451)
T cd07150 80 FETTFTPELLRAAAGECRRVRGE-TLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSE 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCc
Confidence 79999999999998877664322 11111 1234567899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCc
Q 009397 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (535)
Q Consensus 226 ~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk 302 (535)
.+|+++..+.++ |.++|+|+|++|++++.. +.++.|+. ++++|.||||+.+|+.|++.++++++|+++|+|||
T Consensus 157 ~~p~t~~~l~~~----~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~ 232 (451)
T cd07150 157 ETPVIGLKIAEI----MEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGK 232 (451)
T ss_pred cCcHHHHHHHHH----HHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCC
Confidence 999999877766 566999999999999864 67788876 99999999999999999999999999999999999
Q ss_pred ceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 303 ~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
||+||++|+|++.+++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 233 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 312 (451)
T cd07150 233 NPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVER 312 (451)
T ss_pred CeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcE
Q 009397 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (535)
Q Consensus 383 l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 462 (535)
+++++++++++|+++++||. ..|+|++|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+
T Consensus 313 v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 385 (451)
T cd07150 313 IKRQVEDAVAKGAKLLTGGK-------YDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLS 385 (451)
T ss_pred HHHHHHHHHhCCCEEEeCCc-------cCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCe
Confidence 99999999999999999996 25889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.++++++++++++|+|+||+...+.. ..|+ .||+|+++|.+|| ++|++.|++
T Consensus 386 a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l-~~~~~~k~v 449 (451)
T cd07150 386 AAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSM-EEFTELKWI 449 (451)
T ss_pred EEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHH-HHhheeeEE
Confidence 999999999999999999999999999865432 2345 8999999999999 578998876
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=719.50 Aligned_cols=444 Identities=30% Similarity=0.450 Sum_probs=411.3
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhH
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei 148 (535)
+||+||+++++++.++.+|++.++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+||+..++ ..|+
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev 79 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA-GGEI 79 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999998 4899
Q ss_pred HHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCch
Q 009397 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (535)
Q Consensus 149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~ 228 (535)
..+++.++++++..++++.....+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 156 (452)
T cd07102 80 RGMLERARYMISIAEEALADIRVPEK---DGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTP 156 (452)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCC---CCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 99999999999988877654333221 233467899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEE
Q 009397 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306 (535)
Q Consensus 229 ~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~i 306 (535)
+++..+.++ |.++|+|++++|+|+++.+.++.|+. .+++|+||||+++|++|++.++++++|+++|+|||||+|
T Consensus 157 ~~~~~l~~~----l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~i 232 (452)
T cd07102 157 LCGERFAAA----FAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAY 232 (452)
T ss_pred HHHHHHHHH----HHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceE
Confidence 998765555 56799999999999997778888888 899999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009397 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 307 V~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~ 386 (535)
|++|||++.|++.+++|+|+++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..++++++++
T Consensus 233 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~ 312 (452)
T cd07102 233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQ 312 (452)
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEe
Q 009397 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (535)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvf 466 (535)
+++++++|+++++||.+...+ ...|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++||
T Consensus 313 i~~a~~~ga~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (452)
T cd07102 313 IADAIAKGARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVW 391 (452)
T ss_pred HHHHHhCCCEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999999754322 2468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 467 s~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+|.+++.++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|.+
T Consensus 392 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~-~~~~~~k~~ 450 (452)
T cd07102 392 TKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGY-DQLTRPKSY 450 (452)
T ss_pred cCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHH-HHHhceeEE
Confidence 999999999999999999999997543333345 8999999999999 589999876
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-88 Score=719.77 Aligned_cols=442 Identities=29% Similarity=0.432 Sum_probs=407.9
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH--HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~ 146 (535)
.||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|+++++.|++|+++|++++++|+|||..+++ +
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 589999999999999999999999999999985 9999999999999999999999999999999999999999994 8
Q ss_pred hHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCC
Q 009397 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226 (535)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~ 226 (535)
|+..+++.++|++...++..... .+. .......+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~ 157 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDS-YNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEF 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcc-ccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 99999999999988665543211 110 011234578899999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcc
Q 009397 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (535)
Q Consensus 227 ~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~ 303 (535)
+|+++.++.++ |.++|+|+|++|+++++. +.++.|++ +++.|.||||+++|+.|++.++++++|+++|+||||
T Consensus 158 ~p~~~~~l~~~----~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n 233 (454)
T cd07118 158 TSGTTLMLAEL----LIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKN 233 (454)
T ss_pred CcHHHHHHHHH----HHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCC
Confidence 99999877766 566999999999999865 57888887 899999999999999999999999999999999999
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHH
Q 009397 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (535)
Q Consensus 304 p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l 383 (535)
|+||++|||++.|++.+++++|+++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 234 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~ 313 (454)
T cd07118 234 PQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKI 313 (454)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEE
Q 009397 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (535)
Q Consensus 384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a 463 (535)
+++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++
T Consensus 314 ~~~i~~a~~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~ 390 (454)
T cd07118 314 TDYVDAGRAEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSA 390 (454)
T ss_pred HHHHHHHHhCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceE
Confidence 9999999999999999998532 1368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 464 svfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|||+|.+.++++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|++
T Consensus 391 ~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l-~~~t~~k~~ 452 (454)
T cd07118 391 GVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGV-EEYTELKTV 452 (454)
T ss_pred EEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHH-HHHhceeEE
Confidence 999999999999999999999999998665545566 8999999999999 579998876
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=719.26 Aligned_cols=443 Identities=29% Similarity=0.470 Sum_probs=407.5
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHh-hcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~-~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~ 146 (535)
++||+||+++++++.++.+|+++++++|++|++.|. ++|.++|.++|+++++.|.+|+++|++++++|+||+..+++ .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 79 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-A 79 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-H
Confidence 479999999999999999999999999999999876 99999999999999999999999999999999999999995 7
Q ss_pred hHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCC
Q 009397 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226 (535)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~ 226 (535)
|+..+++.++|+++..+++.+.. .+.. .+....++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 80 ev~~~~~~l~~~~~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 155 (454)
T cd07109 80 DVEAAARYFEYYGGAADKLHGET-IPLG---PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAED 155 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999998876654321 1111 2345788999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcc
Q 009397 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (535)
Q Consensus 227 ~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~ 303 (535)
+|+++..+.++ |.++|+|+|++|+++|. .+.++.|++ +++.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 156 ~p~~~~~l~~~----~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~ 231 (454)
T cd07109 156 APLTALRLAEL----AEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKS 231 (454)
T ss_pred ChHHHHHHHHH----HHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCC
Confidence 99999877765 56799999999999985 477888888 799999999999999999999999999999999999
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHH
Q 009397 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (535)
Q Consensus 304 p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l 383 (535)
|+||++|+|++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||++++++++++
T Consensus 232 ~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~ 310 (454)
T cd07109 232 PQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRV 310 (454)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999975 6899999999999999
Q ss_pred HHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEE
Q 009397 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (535)
Q Consensus 384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a 463 (535)
+++|++++++|+++++||.....+ ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++
T Consensus 311 ~~~i~~a~~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~ 389 (454)
T cd07109 311 EGFVARARARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVA 389 (454)
T ss_pred HHHHHHHHhCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceE
Confidence 999999999999999999754332 3578999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 464 svfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|||+|.+.++++++++++|+|+||++..... ..|+ .||+|+++|++|+ ++|++.|.+
T Consensus 390 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~-~~f~~~k~i 452 (454)
T cd07109 390 GVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEAL-YNYTQTKTV 452 (454)
T ss_pred EEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHH-HHHhceeEE
Confidence 99999999999999999999999999763322 3355 9999999999999 589999876
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=720.11 Aligned_cols=448 Identities=30% Similarity=0.470 Sum_probs=413.7
Q ss_pred CeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 009397 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (535)
Q Consensus 64 ~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ 141 (535)
.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+||+..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4689999999999999999999999999999999997 59999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEE
Q 009397 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (535)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~ 221 (535)
++...|+..+++.++|++...+++.... .+.. .+....++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~ 157 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEV-APTG---PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVL 157 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCce-ecCC---CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeee
Confidence 9865699999999999999887765432 1211 23456789999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHh-ccCCceee
Q 009397 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTL 297 (535)
Q Consensus 222 kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa-~~~~pv~~ 297 (535)
|||+.+|+++..++++ |.++|+|+|++|+|+|+. +.++.|+. .++.|.||||+.+|+.|++.++ +++||+++
T Consensus 158 Kps~~~p~~~~~l~~~----~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l 233 (462)
T cd07112 158 KPAEQSPLTALRLAEL----ALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233 (462)
T ss_pred eCCCCCCHHHHHHHHH----HHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEe
Confidence 9999999999887766 567999999999999965 67888876 9999999999999999999988 58999999
Q ss_pred ccCCcceEEEecCC-CHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCC
Q 009397 298 ELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 376 (535)
Q Consensus 298 elgGk~p~iV~~da-Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~ 376 (535)
|+|||||+||++|+ |++.+++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++
T Consensus 234 elgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 313 (462)
T cd07112 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVS 313 (462)
T ss_pred cCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcC
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhc
Q 009397 377 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456 (535)
Q Consensus 377 ~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 456 (535)
++++++++++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+
T Consensus 314 ~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~ 391 (462)
T cd07112 314 EAHFDKVLGYIESGKAEGARLVAGGKRVLT--ETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALAND 391 (462)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhC
Confidence 999999999999999999999999974321 236889999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 457 ~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+++|||+|.+.+.++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|.+
T Consensus 392 ~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~-~~f~~~k~i 460 (462)
T cd07112 392 SVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHAL-DKYTELKTT 460 (462)
T ss_pred CCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHH-HHHhceeEE
Confidence 9999999999999999999999999999999997655544456 9999999999999 579999876
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-87 Score=717.29 Aligned_cols=441 Identities=30% Similarity=0.480 Sum_probs=409.4
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhH
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei 148 (535)
+||+||+++++++.++.+|++.++++|++||..|+++|.++|.++|+++++.|++++++|++++++|+||+..++...|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999965799
Q ss_pred HHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCch
Q 009397 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (535)
Q Consensus 149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~ 228 (535)
..+++.++++++..++.... ..+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p 157 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGE-VIPVR---GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTP 157 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCc-eecCC---CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCc
Confidence 99999999998876654322 11111 234567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceE
Q 009397 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (535)
Q Consensus 229 ~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~ 305 (535)
+++..+.+++ .++|+|++++|+|+|+. +.++.|+. ++|+|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 158 ~~~~~l~~~~----~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~ 233 (453)
T cd07115 158 LSALRIAELM----AEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSAN 233 (453)
T ss_pred HHHHHHHHHH----HhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCce
Confidence 9998877664 56999999999999965 56788887 79999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHH
Q 009397 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (535)
Q Consensus 306 iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~ 385 (535)
||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++
T Consensus 234 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 313 (453)
T cd07115 234 IVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLD 313 (453)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEE
Q 009397 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (535)
Q Consensus 386 ~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asv 465 (535)
+|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|
T Consensus 314 ~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i 389 (453)
T cd07115 314 YVDVGREEGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGV 389 (453)
T ss_pred HHHHHHHCCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999999742 136889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 466 fs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+|.+.++++++++++|+|+||+...+....|| .||+|+++|.+|+ .+|++.|.+
T Consensus 390 fs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~-~~f~~~k~~ 449 (453)
T cd07115 390 WTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREAL-DEYTEVKSV 449 (453)
T ss_pred ECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHH-HHhhceEEE
Confidence 9999999999999999999999997766655566 9999999999999 579999886
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-87 Score=722.72 Aligned_cols=464 Identities=17% Similarity=0.236 Sum_probs=405.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHh-HHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-KVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~-~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
+++||+|+|..+. +.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|+.+|.++|+++++.|++++++
T Consensus 5 ~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (521)
T PRK11903 5 LANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDA 82 (521)
T ss_pred hhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999998653 56899999999999999997 8899999999999995 9999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcc----c-ccccceeeeec-ceEEEEEcCCchh
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS----M-IHKKAKVEFHP-LGVVGAIVSWNYP 201 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~----~-~~~~~~~~~~P-lGVv~~i~p~n~P 201 (535)
|++++++|+|||+.+++ +|+..+++.++|++..++..........+.. . ......+.++| +|||++|+|||||
T Consensus 83 la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 161 (521)
T PRK11903 83 YYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP 161 (521)
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchH
Confidence 99999999999999995 7999999999999987765432111111100 0 11224567899 6999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCc-cchhhhhccccEEEEeCChH
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPG 279 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS~~ 279 (535)
++..++++++||++||+||+|||+.+|+++..+++++ .++| +|+|++|+|+|.. +..+.| ..+++|.||||+.
T Consensus 162 ~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~----~~ag~lP~gv~~~v~g~~~~~~~~l-~~v~~v~fTGS~~ 236 (521)
T PRK11903 162 AWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDV----VAAGILPAGALSVVCGSSAGLLDHL-QPFDVVSFTGSAE 236 (521)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHH----HHhCCCCcCceEEeeCCchHHHhcc-cCCCEEEEECCHH
Confidence 9999999999999999999999999999998877764 5688 9999999999865 444444 5899999999999
Q ss_pred HHHHHHHHH--hccCCceeeccCCcceEEEecCCC-----HHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHH
Q 009397 280 VGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352 (535)
Q Consensus 280 ~g~~v~~~a--a~~~~pv~~elgGk~p~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L 352 (535)
+|++|++.+ +++++|+++|||||||+||++|+| ++.+++.+++|+|.|+||.|++++|||||+++||+|+++|
T Consensus 237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L 316 (521)
T PRK11903 237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL 316 (521)
T ss_pred HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence 999999965 488999999999999999999999 5999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCC--CCCCceeccEEEEcCCC--CCc
Q 009397 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNH--TMK 428 (535)
Q Consensus 353 ~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~--~~~g~~~~Ptvl~~v~~--~~~ 428 (535)
+++++++++|+|.++++++|||+++.++++++++|+.+ .+|+++++||.+...+. ...|+|++|||+.++++ +|.
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~ 395 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA 395 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence 99999999999999999999999999999999999864 57999999997533211 24588999999987654 478
Q ss_pred ccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--CcceEEECCCCc---------cccCC
Q 009397 429 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFAS---------NYMCQ 497 (535)
Q Consensus 429 i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l--~~G~v~IN~~~~---------~~~~~ 497 (535)
+++||+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++ ++|+|+||+... .....
T Consensus 396 i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~ 475 (521)
T PRK11903 396 VHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQS 475 (521)
T ss_pred HHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999 999999997532 11123
Q ss_pred CC----CCCCCCcCc-HHHhhccCceeeee
Q 009397 498 VF----KCIFDEFDS-VHVILNDPTKLKML 522 (535)
Q Consensus 498 ~~----~SG~G~~~g-~~gl~~~~~~~k~~ 522 (535)
|+ .||+||++| .+++ ++|++.|.+
T Consensus 476 PfGG~k~SG~Gr~~g~~~~l-~~~t~~~~~ 504 (521)
T PRK11903 476 LHGGPGRAGGGEELGGLRAL-AFYHRRSAV 504 (521)
T ss_pred CCCCCCcCcCCcccccHHHH-HHHhcccee
Confidence 45 899999955 8998 578888877
|
|
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-87 Score=716.27 Aligned_cols=445 Identities=29% Similarity=0.464 Sum_probs=408.6
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh-hhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM-VDASLG 146 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~-~ea~~~ 146 (535)
++||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||++ .++ .+
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a-~~ 79 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQA-RP 79 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-HH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 577 48
Q ss_pred hHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCC
Q 009397 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226 (535)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~ 226 (535)
|+..+++.++++++..++... ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 80 ev~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~ 155 (457)
T cd07108 80 EAAVLADLFRYFGGLAGELKG-ETLPFG---PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAED 155 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-ceeccC---CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 999999999999887655332 222221 2234578899999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcc
Q 009397 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (535)
Q Consensus 227 ~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~ 303 (535)
+|+++..+.+++.+ ++|+|++|+++|.. +.++.|++ ++|+|.||||+.+|+.|++.++++++|+++|+||||
T Consensus 156 ~p~~~~~l~~~~~~-----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~ 230 (457)
T cd07108 156 APLAVLLLAEILAQ-----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKS 230 (457)
T ss_pred CcHHHHHHHHHHHH-----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCC
Confidence 99999988887654 38999999999864 67788887 799999999999999999999999999999999999
Q ss_pred eEEEecCCCHHHHHHHHHHH-HHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 304 AFIVCDDVDVPHVAQIAVRA-ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 304 p~iV~~daDl~~aa~~i~~~-~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
|+||++|+|++.|++.+++| .|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 231 ~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 310 (457)
T cd07108 231 PMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAK 310 (457)
T ss_pred eeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999 59999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 383 LQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 383 l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
++++|+++++ +|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 311 ~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 390 (457)
T cd07108 311 VCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGL 390 (457)
T ss_pred HHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCc
Confidence 9999999998 999999999864333345789999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.++++++++++++|+|+||+........|| .||+|+++|.+++.++|++.|.+
T Consensus 391 s~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i 455 (457)
T cd07108 391 AAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTV 455 (457)
T ss_pred eeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEE
Confidence 99999999999999999999999999998655444456 99999999998865789999976
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-87 Score=715.99 Aligned_cols=441 Identities=27% Similarity=0.420 Sum_probs=406.9
Q ss_pred EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
++++||+||+++++++.++.+|+++++++|++|+..|+++|..+|.++|+++++.|.+++++|++++++|+||+..+++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 79 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR- 79 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 3679999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCcc--cccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEec
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kp 223 (535)
.|+..+++.+++++++.+++.... .+.... ......+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 80 ~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp 158 (453)
T cd07094 80 VEVDRAIDTLRLAAEEAERIRGEE-IPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 799999999999998877764321 111110 01345678899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccC
Q 009397 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (535)
Q Consensus 224 s~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg 300 (535)
|+.+|+++.++++++ .++|+|+|++++++|+. +.++.|++ +++.|.||||+++|+.|++.+ +++|+++|+|
T Consensus 159 s~~~p~~~~~l~~~l----~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelG 232 (453)
T cd07094 159 ASKTPLSALELAKIL----VEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELG 232 (453)
T ss_pred CCcchHHHHHHHHHH----HHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecC
Confidence 999999999887775 45899999999999866 45888887 799999999999999999987 6899999999
Q ss_pred CcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHH
Q 009397 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (535)
Q Consensus 301 Gk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~ 380 (535)
||||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++
T Consensus 233 Gk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~ 312 (453)
T cd07094 233 GNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAA 312 (453)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCC
Q 009397 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (535)
Q Consensus 381 ~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 460 (535)
++++++|++|+++|+++++||. ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++||
T Consensus 313 ~~~~~~i~~a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~g 385 (453)
T cd07094 313 ERVERWVEEAVEAGARLLCGGE-------RDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYG 385 (453)
T ss_pred HHHHHHHHHHHHCCCEEEeCcc-------CCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999996 358899999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|++||||+|.++++++++++++|+|+||++..+. ...|+ .||+|+++|.+|+ ++|++.|++
T Consensus 386 L~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~-~~~~~~k~i 451 (453)
T cd07094 386 LQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAM-EEMTEEKTV 451 (453)
T ss_pred CeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHH-HHHhceeEE
Confidence 9999999999999999999999999999986542 33456 8999999999999 589999986
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-87 Score=743.67 Aligned_cols=462 Identities=21% Similarity=0.276 Sum_probs=407.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHH-hHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
++++||+|+|+.+ ++..++++||+||+++++++.++ +|+++||++|++| |+.|+++|+.+|+++|+++++.|+++++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3568999999876 46789999999999999999987 6999999999998 7999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCC-------cccCCCcccccccceeeeecc-eEEEEEcCC
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP-------EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSW 198 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~ 198 (535)
+|++ +++|+|||..++. .|+..+++.++|++.++++.+.. +..+... .......+.++|+ |||++|+||
T Consensus 82 ela~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~GVv~~I~Pw 158 (675)
T PRK11563 82 ELYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSK-GGTFAGRHILTPLEGVAVHINAF 158 (675)
T ss_pred HHHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccC-CCcccceEEEeecCceEEEECCC
Confidence 9999 5899999999995 79999999999999887665421 1111100 0011246788997 999999999
Q ss_pred chhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCccchhhhhc--cccEEEEe
Q 009397 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALVS--SVDKIIFV 275 (535)
Q Consensus 199 n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG-~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~ 275 (535)
|||+...++++++||++||+||+|||+.+|+++..+.+++ .++| +|+|++|+|+|+.. +.+.. .+++|+||
T Consensus 159 NfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~----~eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FT 232 (675)
T PRK11563 159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLI----VESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFT 232 (675)
T ss_pred chHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHH----HHcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEE
Confidence 9999999999999999999999999999999998777764 5688 99999999998632 22222 79999999
Q ss_pred CChHHHHHHHHH--HhccCCceeeccCCcceEEEecCCC-----HHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHH
Q 009397 276 GSPGVGRMIMRN--ASKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348 (535)
Q Consensus 276 GS~~~g~~v~~~--aa~~~~pv~~elgGk~p~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f 348 (535)
||+++|++|++. ++++++|+++|||||||+||++||| ++.|++.+++|+|.|+||.|++++|+|||+++||+|
T Consensus 233 GS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 312 (675)
T PRK11563 233 GSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAV 312 (675)
T ss_pred CcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHH
Confidence 999999999985 4589999999999999999999995 999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCC---CCCCCCCceeccEEEEcCCC
Q 009397 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNH 425 (535)
Q Consensus 349 ~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~---~~~~~~g~~~~Ptvl~~v~~ 425 (535)
+++|+++++++++|+|.++++++|||+++.++++++++|++|+++ |++++||.... .+....|+|++|||+.++++
T Consensus 313 ~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~ 391 (675)
T PRK11563 313 IEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDP 391 (675)
T ss_pred HHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCc
Confidence 999999999999999999999999999999999999999999999 99999996321 22234689999999999998
Q ss_pred --CCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC--cceEEECCCCcc------c-
Q 009397 426 --TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASN------Y- 494 (535)
Q Consensus 426 --~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~--~G~v~IN~~~~~------~- 494 (535)
+|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+++.+++++++ +|+|+||+.+.. .
T Consensus 392 ~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~ 471 (675)
T PRK11563 392 LEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGS 471 (675)
T ss_pred hhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCC
Confidence 57999999999999999999999999999999999999999999999999999997 999999985311 1
Q ss_pred --cCCCC----CCCCCCc-CcHHHhhccCceeeee
Q 009397 495 --MCQVF----KCIFDEF-DSVHVILNDPTKLKML 522 (535)
Q Consensus 495 --~~~~~----~SG~G~~-~g~~gl~~~~~~~k~~ 522 (535)
...|+ .||+||+ +|.+|+ ++|++.|++
T Consensus 472 ~~~~~pfGG~k~SG~G~~~~g~~~~-~~f~~~k~~ 505 (675)
T PRK11563 472 PLPQLVHGGPGRAGGGEELGGLRGV-KHYMQRTAV 505 (675)
T ss_pred CCcCCCcCCCCCCCCCccccchhHH-HHhheeeee
Confidence 12234 8999999 469999 589999997
|
|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-87 Score=713.54 Aligned_cols=442 Identities=25% Similarity=0.381 Sum_probs=405.3
Q ss_pred EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|.+++++|++++++|+||+..++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 79 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR- 79 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 3679999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCC-CcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecC
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps 224 (535)
.|+..+++.++++++...++........ .....+....++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 80 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps 159 (452)
T cd07147 80 GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPA 159 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999999999988765432211100 000023345678899999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCc
Q 009397 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (535)
Q Consensus 225 ~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk 302 (535)
+.+|+++.++.++ |.++|+|+|++|+++++.+.+..|+. +++.|+||||+.+|+.|++.++ .+|+++|+|||
T Consensus 160 ~~~p~~~~~l~~~----l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~ 233 (452)
T cd07147 160 SRTPLSALILGEV----LAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGN 233 (452)
T ss_pred CCCcHHHHHHHHH----HHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCC
Confidence 9999999877776 55689999999999997788888886 8999999999999999999876 37999999999
Q ss_pred ceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 303 ~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
||+||++|+|++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcE
Q 009397 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (535)
Q Consensus 383 l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 462 (535)
++++|++++++|+++++||. ..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~ 386 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGK-------RDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQ 386 (452)
T ss_pred HHHHHHHHHHCCCEEEecCC-------cCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999997 35889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.++++++++++++|+|+||+..... ...|+ .||+|+++|.+|+ +.|++.|.+
T Consensus 387 ~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~-~~~~~~k~i 450 (452)
T cd07147 387 AGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAI-EEMTEPRLL 450 (452)
T ss_pred EEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHH-HHhcceeEE
Confidence 99999999999999999999999999976443 23356 8999999999999 589999976
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-86 Score=719.21 Aligned_cols=456 Identities=21% Similarity=0.331 Sum_probs=417.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
+.-||+|+|. .++++++++||+| |+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++
T Consensus 33 ~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (518)
T cd07125 33 AIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGE 110 (518)
T ss_pred cCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3457899887 3578999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..+++ .|+..+++.+++++++.++++.....+.. .+....++++|+|||++|+|||||+...++
T Consensus 111 la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~ 186 (518)
T cd07125 111 LIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGP---TGELNGLELHGRGVFVCISPWNFPLAIFTG 186 (518)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceeEEEEecccEEEEECCcchHHHHHHH
Confidence 99999999999999995 79999999999999988887654322222 234568899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcc-chhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++++.+ .++.|+. .++.|+||||+.+++.|
T Consensus 187 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~l----l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i 262 (518)
T cd07125 187 QIAAALAAGNTVIAKPAEQTPLIAARAVEL----LHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLI 262 (518)
T ss_pred HHHHHHHcCCEEEEeCCCcCcHHHHHHHHH----HHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999877766 5569999999999999764 7788887 89999999999999999
Q ss_pred HHHHhcc---CCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 285 MRNASKT---LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 285 ~~~aa~~---~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
++.++++ ++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 263 ~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 342 (518)
T cd07125 263 NRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342 (518)
T ss_pred HHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCc
Confidence 9998855 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++||++++.++++++++++++++ ++++++||... ...|+|++|||+.++ +|++++||+||||++|
T Consensus 343 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~----~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v 415 (518)
T cd07125 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLD----DGNGYFVAPGIIEIV--GIFDLTTEVFGPILHV 415 (518)
T ss_pred cCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcC----CCCCeEEccEEEeec--CChHhhCcccCCeEEE
Confidence 9999999999999999999999999999987 46899998731 126899999999988 8999999999999999
Q ss_pred eecC--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCCC-cCcHHHh
Q 009397 442 MKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFDE-FDSVHVI 512 (535)
Q Consensus 442 ~~~~--~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G~-~~g~~gl 512 (535)
++|+ |.||||+++|+++|||++||||+|.+.++++++++++|+|+||+..... ...|+ .||+|+ .+|.+|+
T Consensus 416 ~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~ 495 (518)
T cd07125 416 IRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYL 495 (518)
T ss_pred EEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHH
Confidence 9999 9999999999999999999999999999999999999999999976533 23456 999995 7889999
Q ss_pred hccCceeeee
Q 009397 513 LNDPTKLKML 522 (535)
Q Consensus 513 ~~~~~~~k~~ 522 (535)
+.|++.|.+
T Consensus 496 -~~ft~~k~i 504 (518)
T cd07125 496 -LRFGNEKTV 504 (518)
T ss_pred -HHhcceEEE
Confidence 579999987
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=711.75 Aligned_cols=446 Identities=32% Similarity=0.499 Sum_probs=409.5
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
++||.||+++++++.++.+|++.++++|++|+. .|+++|.++|.++|+++++.|.+++++|++++++|+||+..+++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~- 79 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR- 79 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence 479999999999999999999999999999997 59999999999999999999999999999999999999999985
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCC
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~ 225 (535)
.|+..+++.+++++...++... ...+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 80 ~ev~~~~~~~~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~ 156 (457)
T cd07114 80 AQVRYLAEWYRYYAGLADKIEG-AVIPVD--KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSE 156 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-cccccC--CCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCc
Confidence 7999999999998876654322 211111 1234567899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCc
Q 009397 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (535)
Q Consensus 226 ~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk 302 (535)
.+|+++..+.++ |.++|+|+|+||+|+++. +.++.|+. +++.|.||||+++|+.|++.++++++|+++|+|||
T Consensus 157 ~~p~~~~~l~~~----l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~ 232 (457)
T cd07114 157 HTPASTLELAKL----AEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGK 232 (457)
T ss_pred cchHHHHHHHHH----HHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCC
Confidence 999999887766 456899999999999965 56788877 89999999999999999999999999999999999
Q ss_pred ceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 303 ~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
||+||++|+|++.|++.|++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 233 ~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 312 (457)
T cd07114 233 SPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEK 312 (457)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcE
Q 009397 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (535)
Q Consensus 383 l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 462 (535)
++++|++++++|+++++||.+...+....|.|++|||+.+++++|.++++|+||||++|++|+|.||||+++|+++|||+
T Consensus 313 ~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~ 392 (457)
T cd07114 313 VERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLA 392 (457)
T ss_pred HHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCce
Confidence 99999999999999999998654333356899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.+.++++++++++|+|+||+........|+ .||+|+++|.+|+ ++|++.|++
T Consensus 393 ~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~-~~f~~~k~~ 455 (457)
T cd07114 393 AGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAI-REYTQTKSV 455 (457)
T ss_pred eEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHH-HHHhceeEE
Confidence 9999999999999999999999999997655544456 8999999999999 579988876
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-86 Score=709.17 Aligned_cols=441 Identities=28% Similarity=0.446 Sum_probs=406.8
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|.+++++|++++++|+||+..++...|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998875679
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.+++++...+...... .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~ 157 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPA-AGEY--LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETT 157 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc-cCcc--CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 9999999999987765532221 1111 123356789999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcc-chhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcce
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p 304 (535)
|+++..+.+++. + |+|+|++|+++++.+ .++.|++ .++.|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus 158 ~~~~~~l~~~~~----~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p 232 (450)
T cd07092 158 PLTTLLLAELAA----E-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAP 232 (450)
T ss_pred hHHHHHHHHHHH----h-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCe
Confidence 999988777754 4 999999999998664 7788887 8999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHH
Q 009397 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (535)
Q Consensus 305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~ 384 (535)
+||++|||++.|++.+++|+|+++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++
T Consensus 233 ~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~ 312 (450)
T cd07092 233 VIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVA 312 (450)
T ss_pred eEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEE
Q 009397 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (535)
Q Consensus 385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~as 464 (535)
++|+++. +|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++
T Consensus 313 ~~i~~a~-~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ 387 (450)
T cd07092 313 GFVERAP-AHARVLTGGRRAE----GPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASS 387 (450)
T ss_pred HHHHHHH-cCCEEEeCCCCCC----CCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEE
Confidence 9999999 9999999997432 3689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 465 vfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|||+|.+.++++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|.+
T Consensus 388 vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~-~~~~~~k~~ 448 (450)
T cd07092 388 VWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYAL-EDYTRIKHV 448 (450)
T ss_pred EECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHH-HHHheeeEE
Confidence 99999999999999999999999997665544556 9999999999999 589998876
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-86 Score=712.43 Aligned_cols=446 Identities=20% Similarity=0.312 Sum_probs=406.5
Q ss_pred ccccCCcccCCCCCCeEEeecCCCC-cEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATM-KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg-~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
-+||+|+|+. ++..++++||+|| +++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus 39 ~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 116 (500)
T TIGR01238 39 APIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPEL 116 (500)
T ss_pred CceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHH
Confidence 3589999986 4678999999996 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++ ..|+..+++.++|+++..++.+. ...++|+|||++|+|||||+...+++
T Consensus 117 a~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~ 180 (500)
T TIGR01238 117 MALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQ 180 (500)
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC---------------ceeccCcceEEEECCCchHHHHHHHH
Confidence 999999999999999 47999999999999988754321 13578999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++|.. +.++.|+. ++++|+||||+.+|+.|+
T Consensus 181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~----~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~ 256 (500)
T TIGR01238 181 ISAALAAGNTVIAKPAEQTSLIAYRAVEL----MQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLIN 256 (500)
T ss_pred HHHHHHcCCEEEEeCCCCccHHHHHHHHH----HHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence 99999999999999999999998876665 566999999999999865 77888887 999999999999999999
Q ss_pred HHHhccC---CceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 286 RNASKTL---TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 286 ~~aa~~~---~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
+.+++++ +|+++|+|||||+||++|+|++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 257 ~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG 336 (500)
T TIGR01238 257 QTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVG 336 (500)
T ss_pred HHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCC
Confidence 9999876 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|+++.++|++++.++... ......|+|++|||+.+ ++|.++++|+||||++|+
T Consensus 337 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~-~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~ 413 (500)
T TIGR01238 337 VPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDD-SRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVV 413 (500)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCC-CCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEE
Confidence 999999999999999999999999999999999987543211 01124689999999973 689999999999999999
Q ss_pred ecC--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-CcCcHHHhh
Q 009397 443 KFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD-EFDSVHVIL 513 (535)
Q Consensus 443 ~~~--~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G-~~~g~~gl~ 513 (535)
+|+ ++||||+++|+++|||+++|||+|.+.++++++++++|+|+||+...... ..|| .||+| +.+|.+|++
T Consensus 414 ~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~ 493 (500)
T TIGR01238 414 RYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLY 493 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHH
Confidence 998 79999999999999999999999999999999999999999999764432 2356 99999 899999995
Q ss_pred ccCceeee
Q 009397 514 NDPTKLKM 521 (535)
Q Consensus 514 ~~~~~~k~ 521 (535)
+|++.|+
T Consensus 494 -~~~~~k~ 500 (500)
T TIGR01238 494 -RLTQVQY 500 (500)
T ss_pred -HHHhhcC
Confidence 6777763
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-86 Score=710.13 Aligned_cols=458 Identities=28% Similarity=0.413 Sum_probs=420.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhc-CHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~-~~~~R~~iL~~la~~l~~~~~~ 127 (535)
+++||+|+|+.+. +++++++||+||+++++++.++.+|+++++++|++|++.|+++ |..+|.++|+++++.|.+++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999998775 6889999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcc--cccccceeeeecceEEEEEcCCchhhhhh
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
|++++++|+||+..++. .|+..+++.++++++..+++.... .+.... ..+...+++++|+|||++|+|||||+...
T Consensus 81 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 158 (473)
T cd07082 81 VANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDS-LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLT 158 (473)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-ccccccccCCCceeEEEEecceEEEEECCcCcHHHHH
Confidence 99999999999999984 799999999999998877653321 111110 12345678999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|.++.++.++ |.++|+|+++++++++.. +.++.|+. +++.|+||||+++++
T Consensus 159 ~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~----l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 234 (473)
T cd07082 159 VSKLIPALIMGNTVVFKPATQGVLLGIPLAEA----FHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGN 234 (473)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 99999999999999999999999999877766 566899999999999865 45788876 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|
T Consensus 235 ~i~~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g 312 (473)
T cd07082 235 RLKKQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVG 312 (473)
T ss_pred HHHHHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCC
Confidence 9999876 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++++++++++++++++++|+++++||.. ..|+|++||++.+++++|+++++|+||||++|+
T Consensus 313 ~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~ 386 (473)
T cd07082 313 MPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPII 386 (473)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEE
Confidence 99999999999999999999999999999999999999973 238999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCc
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
+|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||++.... ...|| .||+|+++|.+|+ +.|+
T Consensus 387 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l-~~~~ 465 (473)
T cd07082 387 RVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDAL-RSMT 465 (473)
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999976443 23456 9999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 466 ~~k~i 470 (473)
T cd07082 466 RRKGI 470 (473)
T ss_pred ceeEE
Confidence 99986
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-86 Score=706.86 Aligned_cols=446 Identities=30% Similarity=0.460 Sum_probs=411.9
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
.+||+||+++++++.++.+|+++++++|++|+..|+++|.++|.++|+++++.|.+++++|++++++|+||+..+++..|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999887679
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++++++...+. .....+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~ 156 (455)
T cd07093 81 IPRAAANFRFFADYILQL-DGESYPQD---GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWT 156 (455)
T ss_pred HHHHHHHHHHHHHhHHHh-CCccccCC---CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcC
Confidence 999999999999876653 22222111 23456788999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcce
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p 304 (535)
|+++..+.++ |.++|+|+|+||+++|.. +.++.|+. +++.|.||||+.+|+.|.+.++++++|+++|+|||||
T Consensus 157 p~~~~~l~~~----l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~ 232 (455)
T cd07093 157 PLTAWLLAEL----ANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNP 232 (455)
T ss_pred cHHHHHHHHH----HHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCc
Confidence 9999876665 556999999999999854 67788887 7999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHH
Q 009397 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (535)
Q Consensus 305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~ 384 (535)
+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++
T Consensus 233 ~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~ 312 (455)
T cd07093 233 NIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVL 312 (455)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEE
Q 009397 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (535)
Q Consensus 385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~as 464 (535)
++|++++++|+++++||.....+....|.|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||+++
T Consensus 313 ~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~ 392 (455)
T cd07093 313 GYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAY 392 (455)
T ss_pred HHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEE
Confidence 99999999999999999865544445689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 465 vfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|||+|.+.++++++++++|+|+||+........|+ .||+|+++|++|+ ++|++.|.+
T Consensus 393 i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~-~~~~~~k~~ 453 (455)
T cd07093 393 VWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSL-EFYTELKNV 453 (455)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHH-HHHhceeEE
Confidence 99999999999999999999999998655444456 9999999999999 578888876
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-86 Score=703.61 Aligned_cols=432 Identities=30% Similarity=0.441 Sum_probs=398.4
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHH
Q 009397 74 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 153 (535)
Q Consensus 74 g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~ 153 (535)
|+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 79 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG 79 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998884 79999999
Q ss_pred HHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHH-H
Q 009397 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 232 (535)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~-~ 232 (535)
.++++++..++..... .+. ..+.....+++|+|||++|+|||||+...++++++||++||+||+|||+++|.++ .
T Consensus 80 ~l~~~~~~~~~~~~~~-~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 155 (443)
T cd07152 80 ELHEAAGLPTQPQGEI-LPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV 155 (443)
T ss_pred HHHHHHHhHHHhCCcc-ccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence 9999987655432211 111 1234567899999999999999999999999999999999999999999999996 4
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecC
Q 009397 233 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310 (535)
Q Consensus 233 ~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~d 310 (535)
.+ .++|.++|+|+|++|+++|+.+.++.|+. +++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 156 ~l----~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 231 (443)
T cd07152 156 VI----ARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDD 231 (443)
T ss_pred HH----HHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence 44 45577799999999999987678888887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009397 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390 (535)
Q Consensus 311 aDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a 390 (535)
+|++.|++.+++++|.++||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.++++++++|+++
T Consensus 232 Adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 311 (443)
T cd07152 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDS 311 (443)
T ss_pred CCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCH
Q 009397 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470 (535)
Q Consensus 391 ~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~ 470 (535)
+++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.
T Consensus 312 ~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 384 (443)
T cd07152 312 VAAGARLEAGGT-------YDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDV 384 (443)
T ss_pred HhCCCEEEeccC-------cCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCH
Confidence 999999999997 2478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC-CcCcHHHhhccCceeeee
Q 009397 471 HRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD-EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 471 ~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G-~~~g~~gl~~~~~~~k~~ 522 (535)
+++.++++++++|+|+||++.... ...|+ .||+| +++|++|| ++|++.|++
T Consensus 385 ~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l-~~~~~~k~~ 441 (443)
T cd07152 385 GRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANW-EEFTQWQWV 441 (443)
T ss_pred HHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHH-HHhhceeEE
Confidence 999999999999999999976543 23445 99999 99999999 579998876
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-86 Score=699.87 Aligned_cols=421 Identities=29% Similarity=0.510 Sum_probs=392.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcC
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~ 167 (535)
++.++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..+++ .|+..+++.++|++..+++++.
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999999999999999999999995 7999999999999999888766
Q ss_pred CcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 009397 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~ 247 (535)
+...+.+ ....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++ |.++|+
T Consensus 80 ~~~~~~~----~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~----l~~agl 151 (429)
T cd07100 80 DEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEEL----FREAGF 151 (429)
T ss_pred CeeccCC----CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH----HHHcCC
Confidence 5444332 23467899999999999999999999999999999999999999999999999876666 567999
Q ss_pred CCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHH
Q 009397 248 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325 (535)
Q Consensus 248 p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f 325 (535)
|+|++|+|+++.+.+..|+. ++++|.||||+++|+.|++.+++++||+++|+|||||+||++|+|++.|++.+++|+|
T Consensus 152 P~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~ 231 (429)
T cd07100 152 PEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL 231 (429)
T ss_pred CcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 99999999997777778887 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCC
Q 009397 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405 (535)
Q Consensus 326 ~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~ 405 (535)
.++||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.++++++++|++++++|+++++||.+..
T Consensus 232 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 311 (429)
T cd07100 232 QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD 311 (429)
T ss_pred hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997421
Q ss_pred CCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceE
Q 009397 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485 (535)
Q Consensus 406 ~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v 485 (535)
..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|
T Consensus 312 ----~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v 387 (429)
T cd07100 312 ----GPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMV 387 (429)
T ss_pred ----CCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeE
Confidence 2589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 486 AINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 486 ~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+||+........|+ .||+|+++|.+|| ++|++.|++
T Consensus 388 ~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~l-~~~~~~k~v 427 (429)
T cd07100 388 FINGMVKSDPRLPFGGVKRSGYGRELGRFGI-REFVNIKTV 427 (429)
T ss_pred EECCCCCCCCCCCcCCccccccCCcchHHHH-HHhcceeEE
Confidence 99998654444455 8999999999999 689999986
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-85 Score=702.78 Aligned_cols=442 Identities=32% Similarity=0.515 Sum_probs=409.5
Q ss_pred eecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh
Q 009397 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (535)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E 147 (535)
++||.||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|.+++++|++++++|+||+..+++ .|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 79 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GE 79 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999995 79
Q ss_pred HHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCc
Q 009397 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (535)
Q Consensus 148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~ 227 (535)
+..+++.++|++...++..... .+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~ 156 (451)
T cd07103 80 VDYAASFLEWFAEEARRIYGRT-IPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEET 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc-cccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccC
Confidence 9999999999988776654321 1111 124567889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcce
Q 009397 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (535)
Q Consensus 228 ~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p 304 (535)
|.++..+.++ |.++|+|+|++|+++++. +.++.|+. ++|.|+||||+.+|+.+.+.++++++|+++|+|||||
T Consensus 157 ~~~~~~l~~~----l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~ 232 (451)
T cd07103 157 PLSALALAEL----AEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAP 232 (451)
T ss_pred cHHHHHHHHH----HHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCe
Confidence 9999877766 456999999999999965 56777776 8999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHH
Q 009397 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (535)
Q Consensus 305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~ 384 (535)
+||++|+|++.|++.+++|+|.++||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++.++++++
T Consensus 233 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~ 312 (451)
T cd07103 233 FIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVE 312 (451)
T ss_pred EEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEE
Q 009397 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (535)
Q Consensus 385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~as 464 (535)
+++++++++|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|+++|||+++
T Consensus 313 ~~i~~a~~~ga~~l~gg~~~~----~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 388 (451)
T cd07103 313 ALVEDAVAKGAKVLTGGKRLG----LGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAY 388 (451)
T ss_pred HHHHHHHHCCCEEEeCCCcCC----CCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEE
Confidence 999999999999999997421 3688999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 465 vfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|||+|.+.+++++.++++|+|+||+........|+ .||+|+++|++|+ +.|++.|.+
T Consensus 389 i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~-~~~~~~k~v 449 (451)
T cd07103 389 VFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGL-EEYLETKYV 449 (451)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHH-HHHhceeEE
Confidence 99999999999999999999999998755444456 8999999999999 578988876
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-85 Score=698.44 Aligned_cols=437 Identities=25% Similarity=0.400 Sum_probs=398.9
Q ss_pred EeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 009397 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (535)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~ 146 (535)
+++||+||+++++++.++.+|+++++++|+++ |+++|..+|.++|+++++.|++++++|++++++|+|||..++. .
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ 77 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-Y 77 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-H
Confidence 57899999999999999999999999999864 8889999999999999999999999999999999999999995 7
Q ss_pred hHHHHHHHHHHHHHhchhhcCCcccCCCcc--cccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecC
Q 009397 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (535)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps 224 (535)
|+..+++.++++++...+..... .+.... ......+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 78 ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps 156 (451)
T cd07146 78 EVGRAADVLRFAAAEALRDDGES-FSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPS 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcc-cccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence 99999999999998776543221 111100 023446788999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 225 ~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
+.+|+++..+.++ |.++|+|+|++|+++|++ +.++.|++ +++.|.||||+.+|+.|++.++ .+|+++|+||
T Consensus 157 ~~~p~~~~~l~~~----l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG 230 (451)
T cd07146 157 EKTPLSAIYLADL----LYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGG 230 (451)
T ss_pred CCchHHHHHHHHH----HHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCC
Confidence 9999998766665 667999999999999875 66888887 8999999999999999998775 6899999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|+|++.+++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 231 ~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~ 310 (451)
T cd07146 231 NDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAI 310 (451)
T ss_pred CceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
++++++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 311 ~v~~~v~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 383 (451)
T cd07146 311 QIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGL 383 (451)
T ss_pred HHHHHHHHHHhCCCEEEeCCC-------cCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 999999999999999999997 2588999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCC-CCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIF-DEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~-G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.++++++++++++|+|+||+...+. ...|+ .||+ |+++|++|| ++|++.|++
T Consensus 384 ~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~-~~f~~~k~~ 449 (451)
T cd07146 384 SSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAM-KEMTNVKTY 449 (451)
T ss_pred eEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHH-HHHhceeEE
Confidence 999999999999999999999999999865443 22355 8995 899999999 579999976
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-85 Score=699.61 Aligned_cols=426 Identities=27% Similarity=0.417 Sum_probs=393.3
Q ss_pred CCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHh
Q 009397 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 82 ~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
..+.+|+++++++|++|+..|+++|.++|.++|+++++.|++|+++|++++++|+||+..|+...|+..+++.+++++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999878999999999999999
Q ss_pred chhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 009397 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (535)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~ 241 (535)
.+++.++.............++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~- 161 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK- 161 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-
Confidence 9998876644332222234578999999999999999999999999999999999999999999999999988887654
Q ss_pred HHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHH
Q 009397 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i 320 (535)
++|+|++++|+|+.+.+..|++ .+|+|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.+
T Consensus 162 ----~lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i 237 (493)
T PTZ00381 162 ----YLDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRI 237 (493)
T ss_pred ----hCCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence 4999999999997788888888 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 321 ~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
++|+|.|+||.|++++|++||++++|+|+++|++.+++++ |++.++++++|||+++.+++++++++++ +|+++++|
T Consensus 238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~g 313 (493)
T PTZ00381 238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYG 313 (493)
T ss_pred HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEEC
Confidence 9999999999999999999999999999999999999986 6666788999999999999999999964 69999999
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
|.. ...+.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 314 G~~-----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~ 388 (493)
T PTZ00381 314 GEV-----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENT 388 (493)
T ss_pred CCc-----CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 973 246789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 481 QCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 481 ~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|+|+||+..... ...|| .||+|+++|.+|+ ++|++.|++
T Consensus 389 ~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~-~~fs~~k~v 435 (493)
T PTZ00381 389 SSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGF-DTFSHPKPV 435 (493)
T ss_pred CcceEEECCccccccCCCCCCCCcCcccccccchHHHH-HhccceeEE
Confidence 99999999975433 23345 8999999999999 589999997
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-84 Score=695.11 Aligned_cols=428 Identities=28% Similarity=0.406 Sum_probs=391.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHh
Q 009397 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 82 ~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
.+..+|+++++++|++||..|+++|..+|.++|+++++.|++++++|++++++|+||+..++..+|+..+++.++|++++
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999667999999999999998
Q ss_pred chhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 009397 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (535)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~ 241 (535)
.+++..+..............++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~- 160 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK- 160 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH-
Confidence 8887654321111111234568899999999999999999999999999999999999999999999999988877653
Q ss_pred HHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec---CCCHHHHH
Q 009397 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD---DVDVPHVA 317 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~---daDl~~aa 317 (535)
++|+|++|+|+|+.+.++.|+. .+++|+||||+++|+.|++.++++++|+++|+|||||+||++ |+|++.++
T Consensus 161 ----~lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa 236 (484)
T PLN02203 161 ----YLDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAV 236 (484)
T ss_pred ----hCCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHH
Confidence 4999999999996688888888 899999999999999999999999999999999999999997 69999999
Q ss_pred HHHHHHHHH-hcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCc
Q 009397 318 QIAVRAALQ-SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 396 (535)
Q Consensus 318 ~~i~~~~f~-~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~ 396 (535)
+.+++++|. |+||.|++++|+|||+++||+|+++|.++++++++|+|.++ .++|||+++.++++++++|++++++ ++
T Consensus 237 ~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~ 314 (484)
T PLN02203 237 NRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-AS 314 (484)
T ss_pred HHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-Ce
Confidence 999999996 89999999999999999999999999999999999999875 6899999999999999999999987 78
Q ss_pred EeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHH
Q 009397 397 ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476 (535)
Q Consensus 397 ~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~ 476 (535)
+++||.. .+.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++
T Consensus 315 ~~~gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 315 IVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred EEeCCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 9999873 23689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 477 AAQIQCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 477 a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++++++|+|+||+..... ...|+ .||+|+++|.+|+ ++|++.|++
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l-~~ft~~k~v 440 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSF-DTFSHEKAV 440 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHH-HHhcceeEE
Confidence 999999999999975432 23345 9999999999999 589999998
|
|
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-84 Score=695.27 Aligned_cols=442 Identities=28% Similarity=0.443 Sum_probs=403.7
Q ss_pred EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 009397 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (535)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~ 145 (535)
|+++||+||+++++++.++.+|++.++++|++|+..|+++|.++|.++|+++++.|.+++++|++++++|+||+..++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 79 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR- 79 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred hhHHHHHHHHHHHHHhchhhcCCcccCCCcc-cccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecC
Q 009397 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (535)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps 224 (535)
.|+..+++.++++++...+............ ......+.+++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 80 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps 159 (453)
T cd07149 80 KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPA 159 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999999999887765433211110000 012235778999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcc-chhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 225 ~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
+.+|.++.++.+++ .++|+|+|++|+++++.+ .++.|+. ++++|.||||+++|+.|++.++ ++|+++|+||
T Consensus 160 ~~~p~~~~~l~~~l----~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGG 233 (453)
T cd07149 160 SQTPLSALKLAELL----LEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGS 233 (453)
T ss_pred CcchHHHHHHHHHH----HHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCC
Confidence 99999998777664 568999999999998664 4788887 7999999999999999999875 7999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|+|++.+++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 234 k~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 313 (453)
T cd07149 234 NAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAE 313 (453)
T ss_pred CceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
++++++++++.+|+++++||. ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||
T Consensus 314 ~~~~~i~~a~~~ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 386 (453)
T cd07149 314 RIEEWVEEAVEGGARLLTGGK-------RDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGL 386 (453)
T ss_pred HHHHHHHHHHHCCCEEEeCCC-------CCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCc
Confidence 999999999999999999997 3488999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.++++++++++++|+|+||+..... ...|+ .||+|+++|++|+ ++|++.|.+
T Consensus 387 t~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~-~~~~~~k~~ 451 (453)
T cd07149 387 QAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAI-EEMTEIKLV 451 (453)
T ss_pred eEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHH-HHhhceeEE
Confidence 999999999999999999999999999976443 23356 8999999999999 579998876
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=686.08 Aligned_cols=439 Identities=19% Similarity=0.237 Sum_probs=386.5
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHH--hhcCHHHH----HHHHHHHHHHHHHh
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVW--AKSSFKQR----RQFLRILLKYIIEH 124 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W--~~~~~~~R----~~iL~~la~~l~~~ 124 (535)
+||+|+|+.+ +++++++||+||+++++++.++.+|+++++++|++||+.| +.++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4789999765 4789999999999999999999999999999999999998 55779999 89999999999998
Q ss_pred --HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcc-cCCCcccccccceeeeecceEEEEEcCCchh
Q 009397 125 --QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (535)
Q Consensus 125 --~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P 201 (535)
.++|++++++|+|||+.++ .+||..+++.++|+++...+...... .+.. ..+...+++++|+|||++|+|||||
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~--~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCC--CCCceeEEEEecceEEEEECCCchH
Confidence 4999999999999999998 58999999999999988776543321 1111 1234568999999999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChH
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~ 279 (535)
+...++++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|.++.+..++. ++++|+||||+.
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~----~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~ 231 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRL----LHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSK 231 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHH----HHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHH
Confidence 999999999999999999999999999999877766 55699999999999996654555664 999999999999
Q ss_pred HHHHHHHHHhccCCceeeccCCcceEEEecCC-CHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-HHHHHHHHHHHHh
Q 009397 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVK 357 (535)
Q Consensus 280 ~g~~v~~~aa~~~~pv~~elgGk~p~iV~~da-Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v-~d~f~~~L~~~~~ 357 (535)
+|+.|...++ +++.+|+|||||+||++|+ |++.+++.+++|+|.|+||.|++++|+|||+++ +|+|+++|++.++
T Consensus 232 vGr~i~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~ 308 (489)
T cd07126 232 VAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAE 308 (489)
T ss_pred HHHHHHHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHH
Confidence 9999998876 6799999999999999999 999999999999999999999999999999995 6899999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCC-ceeccEEEEc------CCCCCcc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVD-QYFPPTVIVN------VNHTMKL 429 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g-~~~~Ptvl~~------v~~~~~i 429 (535)
++++|+ +++|||++.. .+++.++|+++++ +||++++||..........+ .|++|||+.. ++++|++
T Consensus 309 ~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i 382 (489)
T cd07126 309 QRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFEL 382 (489)
T ss_pred hcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHH
Confidence 999874 5899999998 9999999999998 99999999975321111133 3899999952 6789999
Q ss_pred cccccccceeeeeecCC--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcce--EEECCCCccccC----CCC--
Q 009397 430 MQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV--AAINDFASNYMC----QVF-- 499 (535)
Q Consensus 430 ~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~--v~IN~~~~~~~~----~~~-- 499 (535)
++||+||||++|++|+| .+|||+++|+++|||++||||+|.++++++++++++|+ |+||+....... .||
T Consensus 383 ~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg 462 (489)
T cd07126 383 VTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGD 462 (489)
T ss_pred HhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCC
Confidence 99999999999999999 89999999999999999999999999999999999999 669987655433 344
Q ss_pred --CCCCCCcC
Q 009397 500 --KCIFDEFD 507 (535)
Q Consensus 500 --~SG~G~~~ 507 (535)
.||+||.+
T Consensus 463 ~k~sg~g~~~ 472 (489)
T cd07126 463 PRGAGIGTPE 472 (489)
T ss_pred CcccCCCCHh
Confidence 89999864
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-84 Score=683.70 Aligned_cols=420 Identities=25% Similarity=0.374 Sum_probs=384.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhc
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 166 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l 166 (535)
|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++...++.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999999999999999999999999999994 799999999999998877765
Q ss_pred CCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 009397 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG 246 (535)
.+...+. .+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.++ |.++|
T Consensus 80 ~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~----~~~ag 151 (431)
T cd07095 80 GERATPM----AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVEL----WEEAG 151 (431)
T ss_pred CCcccCC----CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHH----HHHhC
Confidence 5433221 244678899999999999999999999999999999999999999999999999876665 56699
Q ss_pred CCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhcc-CCceeeccCCcceEEEecCCCHHHHHHHHHHH
Q 009397 247 APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 323 (535)
Q Consensus 247 ~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~-~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~ 323 (535)
+|+|++|+++++.+.++.|++ +++.|.||||+++|+.|++.++++ .+++++|+|||||+||++|+|++.|++.+++|
T Consensus 152 ~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~ 231 (431)
T cd07095 152 LPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQS 231 (431)
T ss_pred cChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 999999999997677888887 799999999999999999987754 69999999999999999999999999999999
Q ss_pred HHHhcCCCCCCccEEEEecc-cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCC
Q 009397 324 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402 (535)
Q Consensus 324 ~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~ 402 (535)
+|.|+||.|++++|||||++ +||+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.
T Consensus 232 ~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~ 311 (431)
T cd07095 232 AFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME 311 (431)
T ss_pred HHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCc
Q 009397 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 482 (535)
Q Consensus 403 ~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~ 482 (535)
... ..|+|++|||+ +++++|.+++||+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++
T Consensus 312 ~~~----~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~ 386 (431)
T cd07095 312 RLV----AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRA 386 (431)
T ss_pred cCC----CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 432 36899999999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEECCCCcccc-CCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 483 GVAAINDFASNYM-CQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 483 G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+|+||+...... ..|+ .||+|+++|.+|++ ++..|++
T Consensus 387 G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~--~~~~~~~ 429 (431)
T cd07095 387 GIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYYAAD--YCAYPVA 429 (431)
T ss_pred ceEEECCCCCCCCCCCCCCCcccccCCCCChHHHHH--HHhhhhc
Confidence 9999998654322 2345 99999999999995 4555543
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-84 Score=682.78 Aligned_cols=420 Identities=27% Similarity=0.415 Sum_probs=383.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCc
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~ 169 (535)
+++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||++.++...|+..+++.++|++++..++..+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 48999999999999999999999999999999999999999999999999998865699999999999999887765543
Q ss_pred ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 009397 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (535)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~ 249 (535)
.............++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.+ ++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~-----~~P~ 157 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE-----YLDT 157 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH-----hCCc
Confidence 22111111223567899999999999999999999999999999999999999999999999988887654 4999
Q ss_pred CcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHH-Hh
Q 009397 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL-QS 327 (535)
Q Consensus 250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f-~~ 327 (535)
|++|+++|+.+.++.|++ .++.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++|+| .|
T Consensus 158 gvv~~v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~ 237 (432)
T cd07137 158 KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCN 237 (432)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhcc
Confidence 999999997678888888 8999999999999999999999999999999999999999999999999999999999 59
Q ss_pred cCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCC
Q 009397 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407 (535)
Q Consensus 328 ~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~ 407 (535)
+||.|++++|+|||+++||+|+++|.+++++++.|+| ++++++|||+++.++++++++|++++. |+++++||.+
T Consensus 238 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~---- 311 (432)
T cd07137 238 NGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER---- 311 (432)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc----
Confidence 9999999999999999999999999999999999999 568899999999999999999999998 8999999973
Q ss_pred CCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEE
Q 009397 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487 (535)
Q Consensus 408 ~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~I 487 (535)
..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+|
T Consensus 312 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~i 390 (432)
T cd07137 312 -DEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTF 390 (432)
T ss_pred -CCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEE
Confidence 1368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 488 NDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 488 N~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+..... ...|+ .||+|+++|.+|+ ++|++.|.+
T Consensus 391 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~f~~~k~v 430 (432)
T cd07137 391 NDTVVQYAIDTLPFGGVGESGFGAYHGKFSF-DAFSHKKAV 430 (432)
T ss_pred CCccccccCCCCCCCCcCcCcCCccccHHHH-HHhccCcee
Confidence 9975433 23345 8999999999999 589998876
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-83 Score=682.91 Aligned_cols=425 Identities=25% Similarity=0.419 Sum_probs=389.1
Q ss_pred CCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhc
Q 009397 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (535)
Q Consensus 83 ~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (535)
.+.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.++|+++..
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999986579999999999999988
Q ss_pred hhhcCCcccCCC-cccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 009397 163 EKWLKPEYRSSG-RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (535)
Q Consensus 163 ~~~l~~~~~~~~-~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~ 241 (535)
+++...+..... ........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 776544332221 111234568899999999999999999999999999999999999999999999999877777653
Q ss_pred HHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHH
Q 009397 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i 320 (535)
|+|+|++|+++|..+....|+. .++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+
T Consensus 161 ----~lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i 236 (436)
T cd07135 161 ----YLDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRI 236 (436)
T ss_pred ----hCCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHH
Confidence 6999999999987655556777 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 321 ~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
++++|.++||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++ |+++++|
T Consensus 237 ~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g 312 (436)
T cd07135 237 LWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG 312 (436)
T ss_pred HHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999987 8899999
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
|.+. ..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 313 g~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l 387 (436)
T cd07135 313 GEMD-----EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRT 387 (436)
T ss_pred CCcC-----CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcC
Confidence 9742 36899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 481 QCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 481 ~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|+|+||+..... ...|+ .||+|+++|.+|| ++|++.|.+
T Consensus 388 ~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t~~k~i 434 (436)
T cd07135 388 RSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGF-DTFTHERTV 434 (436)
T ss_pred CcCeEEECCccccccCCCCCcCCcCcccCCccccHhHH-HHhcccccc
Confidence 99999999875443 23456 8999999999999 579998876
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=679.05 Aligned_cols=416 Identities=28% Similarity=0.437 Sum_probs=381.2
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCc
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~ 169 (535)
+.+++|++||+.|+++|..+|+++|+++++.|++|+++|++++++|+||++.+++..|+..+++.++|++++.+++...+
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56899999999999999999999999999999999999999999999999999976799999999999999887765543
Q ss_pred ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 009397 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (535)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~ 249 (535)
..+......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++++ + +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~----a-lP~ 156 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE----T-FDE 156 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH----h-CCC
Confidence 22221111234567899999999999999999999999999999999999999999999999988777654 5 999
Q ss_pred CcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhc
Q 009397 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (535)
Q Consensus 250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~ 328 (535)
|++|+|+|+.+.+..|+. .++.|+||||+++|+.|++.++++++|+++|+|||||+||++|+|+|.+++.+++++|.++
T Consensus 157 gv~~~v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~ 236 (449)
T cd07136 157 EYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNA 236 (449)
T ss_pred CEEEEEeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHccc
Confidence 999999997778888888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCC
Q 009397 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408 (535)
Q Consensus 329 GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~ 408 (535)
||.|++++|||||+++||+|+++|++++++++.|+|.+ ++++||++++.++++++++|++ +++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~----- 305 (449)
T cd07136 237 GQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNT----- 305 (449)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCc-----
Confidence 99999999999999999999999999999999999987 8899999999999999999976 389999973
Q ss_pred CCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEEC
Q 009397 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488 (535)
Q Consensus 409 ~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN 488 (535)
.+.|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN 385 (449)
T cd07136 306 DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN 385 (449)
T ss_pred CCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 13689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 489 DFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 489 ~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+..... ...|+ .||+|+++|.+|+ ++|++.|++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~t~~k~v 424 (449)
T cd07136 386 DTIMHLANPYLPFGGVGNSGMGSYHGKYSF-DTFSHKKSI 424 (449)
T ss_pred CccccccCCCCCccCcCcccCCcccCHHHH-HHhccceEE
Confidence 875433 23355 9999999999999 689999988
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-83 Score=676.36 Aligned_cols=423 Identities=30% Similarity=0.460 Sum_probs=384.6
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC-hhhhhhhhHHHHHHHHHHHHHhchhhcCC
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT-MVDASLGEIMTTCEKITWLLSEGEKWLKP 168 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~-~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~ 168 (535)
..+++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+||+ ..++..+|+..+++.++|++++.++++.+
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~ 81 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP 81 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35788999999999999999999999999999999999999999999985 56776689999999999999988877665
Q ss_pred cccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCC
Q 009397 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248 (535)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p 248 (535)
..............+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++.+++.+ + +|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~----a-lP 156 (434)
T cd07133 82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAE----Y-FD 156 (434)
T ss_pred cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----h-CC
Confidence 433222111234568899999999999999999999999999999999999999999999999888777654 3 89
Q ss_pred CCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHh
Q 009397 249 ENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327 (535)
Q Consensus 249 ~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~ 327 (535)
+|++|+++|+.+.++.|+. .++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.|
T Consensus 157 ~g~~~~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 157 EDEVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred cCeEEEEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 9999999997777888888 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCC
Q 009397 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407 (535)
Q Consensus 328 ~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~ 407 (535)
+||.|++++|||||+++||+|+++|+++++++++|+ ++++++||++++.++++++++|++++++|+++++||.+...
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~- 313 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED- 313 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC-
Confidence 999999999999999999999999999999999886 46789999999999999999999999999999999974321
Q ss_pred CCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEE
Q 009397 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487 (535)
Q Consensus 408 ~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~I 487 (535)
...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 314 -~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~i 392 (434)
T cd07133 314 -FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTI 392 (434)
T ss_pred -CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 1468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 488 NDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 488 N~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+..... ...|+ .||+|+++|.+|+ ++|++.|++
T Consensus 393 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~ft~~k~v 432 (434)
T cd07133 393 NDTLLHVAQDDLPFGGVGASGMGAYHGKEGF-LTFSHAKPV 432 (434)
T ss_pred CCcccccCCCCCCcCCCCcccCCCcCCHHHH-HHhccccee
Confidence 9875333 23345 8999999999999 579999886
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=674.07 Aligned_cols=422 Identities=29% Similarity=0.469 Sum_probs=387.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCc
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~ 169 (535)
+++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.+++++.+..+.....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999876899999999999998876655543
Q ss_pred ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 009397 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (535)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~ 249 (535)
..+....+.+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++.+++++ + +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~----a-~p~ 156 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE----A-FDE 156 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH----h-CCc
Confidence 22222112344678999999999999999999999999999999999999999999999999877777654 5 899
Q ss_pred CcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhc
Q 009397 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (535)
Q Consensus 250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~ 328 (535)
|++++++|+.+.++.|++ .++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.++
T Consensus 157 g~v~~v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~ 236 (433)
T cd07134 157 DEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNA 236 (433)
T ss_pred CEEEEEeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCc
Confidence 999999997788888888 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCC
Q 009397 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407 (535)
Q Consensus 329 GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~-~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~ 407 (535)
||.|++++|||||+++||+|+++|++++++++.|+| .+.++++||++++.++++++++|++++++|+++++||..
T Consensus 237 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~---- 312 (433)
T cd07134 237 GQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF---- 312 (433)
T ss_pred CCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc----
Confidence 999999999999999999999999999999988887 788899999999999999999999999999999999973
Q ss_pred CCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEE
Q 009397 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487 (535)
Q Consensus 408 ~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~I 487 (535)
...|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+|
T Consensus 313 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 391 (433)
T cd07134 313 -DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVV 391 (433)
T ss_pred -CCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 2358999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 488 NDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 488 N~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+....+ ...|+ .||+|+++|.+|| .+|++.|++
T Consensus 392 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~~~~k~i 431 (433)
T cd07134 392 NDVVLHFLNPNLPFGGVNNSGIGSYHGVYGF-KAFSHERAV 431 (433)
T ss_pred CCcccccCCCCCCCCCcCcccCCCcCcHHHH-HHhccccee
Confidence 9976543 23456 8999999999999 589999876
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-82 Score=720.49 Aligned_cols=447 Identities=21% Similarity=0.363 Sum_probs=409.6
Q ss_pred CCCeEEeecCCCCc-EEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 009397 62 SETKVQCYEPATMK-YLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (535)
Q Consensus 62 ~~~~~~~~~P~tg~-~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~ 140 (535)
+++.++++||+|++ ++++++.++.+|++.||++|++|++.|+++|+.+|.++|+++++.|++++++|+.++++|+||++
T Consensus 560 ~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~ 639 (1038)
T PRK11904 560 EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTL 639 (1038)
T ss_pred CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 46789999999988 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhchhhcC-CcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEE
Q 009397 141 VDASLGEIMTTCEKITWLLSEGEKWLK-PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 219 (535)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~V 219 (535)
.++ ..||..+++.++|++..+++... +...++. .+..+.++++|+|||++|+|||||+..+++++++||++||+|
T Consensus 640 ~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~---~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtV 715 (1038)
T PRK11904 640 QDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGP---TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTV 715 (1038)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCC---CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence 999 58999999999999999887653 2222322 345678999999999999999999999999999999999999
Q ss_pred EEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhcc---CC
Q 009397 220 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LT 293 (535)
Q Consensus 220 V~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~---~~ 293 (535)
|+|||+++|+++..++++ |.++|+|+|++|+|+|++ +.++.|+. +++.|.||||+++++.|.+.++++ ++
T Consensus 716 IlKPse~tpl~a~~l~~l----l~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~ 791 (1038)
T PRK11904 716 IAKPAEQTPLIAAEAVKL----LHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIV 791 (1038)
T ss_pred EeeCCCcCHHHHHHHHHH----HHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCc
Confidence 999999999999877776 556999999999999976 47888887 899999999999999999988865 68
Q ss_pred ceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccc
Q 009397 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (535)
Q Consensus 294 pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gp 373 (535)
|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.+.++++||
T Consensus 792 pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GP 871 (1038)
T PRK11904 792 PLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGP 871 (1038)
T ss_pred eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC--CHHHHH
Q 009397 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVV 451 (535)
Q Consensus 374 li~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~--~~~eai 451 (535)
+|++.++++++++|+++.+ |+++++||...+ ....|+|++|||+. .++|.+++||+||||++|++|+ +++|+|
T Consensus 872 vI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI 946 (1038)
T PRK11904 872 VIDAEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVI 946 (1038)
T ss_pred CCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHH
Confidence 9999999999999999876 899999997422 12369999999985 3678899999999999999997 689999
Q ss_pred HHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCC-CcCcHHHhhccCceeeee
Q 009397 452 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFD-EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 452 ~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G-~~~g~~gl~~~~~~~k~~ 522 (535)
+++|+++|||+++|||+|.+.++++++++++|+|+||+..+.. ..||| .||+| +.||+++| ..|++.|.+
T Consensus 947 ~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L-~~f~~~ktv 1023 (1038)
T PRK11904 947 DAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYL-LRFATEKTV 1023 (1038)
T ss_pred HHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHH-HHHhceEEE
Confidence 9999999999999999999999999999999999999975543 34577 89999 68889999 579999987
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-82 Score=671.79 Aligned_cols=419 Identities=31% Similarity=0.437 Sum_probs=382.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhc
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 166 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l 166 (535)
|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++.++++++..+++.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999988874 799999999999998776542
Q ss_pred CCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 009397 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG 246 (535)
. ...+.. ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++ |.++|
T Consensus 80 ~-~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~----~~~aG 152 (432)
T cd07105 80 G-GSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRV----FHEAG 152 (432)
T ss_pred C-eecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHH----HHHcC
Confidence 2 222211 1234567889999999999999999999999999999999999999999999999876665 56799
Q ss_pred CCCCcEEEEeCCc----cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHH
Q 009397 247 APENLVDVITGFA----ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (535)
Q Consensus 247 ~p~~~v~~v~~~~----~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i 320 (535)
+|+|++|+++++. +.++.|++ +++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.+++.+
T Consensus 153 lP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i 232 (432)
T cd07105 153 LPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAA 232 (432)
T ss_pred cCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHH
Confidence 9999999999864 35677887 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 321 ~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
++++|.|+||.|++++|||||+++||+|+++|.++++++++| .+++||++++.++++++++|++++++|+++++|
T Consensus 233 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~g 307 (432)
T cd07105 233 LFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVG 307 (432)
T ss_pred HHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 999999999999999999999999999999999999999998 579999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
|..... ..|+|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++
T Consensus 308 g~~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l 384 (432)
T cd07105 308 GLADES---PSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRI 384 (432)
T ss_pred CCcCCC---CCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 985321 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 481 QCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 481 ~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|+|+||+..... ...|+ .||+|+++|++|+ ++|++.|++
T Consensus 385 ~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l-~~~~~~k~v 430 (432)
T cd07105 385 ESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGI-DEFTETKWI 430 (432)
T ss_pred CcCeEEECCCCCCCCCCCCCCCcccccccccChHHHH-HHhhceEEE
Confidence 99999999976442 23455 9999999999999 589999876
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-82 Score=672.31 Aligned_cols=421 Identities=31% Similarity=0.477 Sum_probs=386.4
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhc
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 166 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l 166 (535)
|+++++++|++|++.|+++|..+|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++.+++++....+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999999999984 799999999999988765542
Q ss_pred CCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 009397 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG 246 (535)
.. ..+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.. ++.++|.++|
T Consensus 80 ~~-~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~---~l~~~l~~aG 153 (431)
T cd07104 80 GE-ILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGL---LIAEIFEEAG 153 (431)
T ss_pred Cc-cccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHH---HHHHHHHHcC
Confidence 21 11111 123456889999999999999999999999999999999999999999999987432 3455677899
Q ss_pred CCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHH
Q 009397 247 APENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 323 (535)
Q Consensus 247 ~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~ 323 (535)
+|+|++|+++++. +.++.|+. +++.|+||||+.+++.|++.++++++|+++|+|||||+||++|+|++.|++.+++|
T Consensus 154 lP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~ 233 (431)
T cd07104 154 LPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFG 233 (431)
T ss_pred CCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHH
Confidence 9999999999865 57788887 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCC
Q 009397 324 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (535)
Q Consensus 324 ~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~ 403 (535)
+|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.
T Consensus 234 ~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~- 312 (431)
T cd07104 234 AFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT- 312 (431)
T ss_pred HHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcc
Q 009397 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 483 (535)
Q Consensus 404 ~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G 483 (535)
..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|
T Consensus 313 ------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g 386 (431)
T cd07104 313 ------YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETG 386 (431)
T ss_pred ------CCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcC
Confidence 25889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 484 VAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 484 ~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|+||+..... ...|| .||+|+++|++|+ +.|++.|++
T Consensus 387 ~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l-~~~~~~k~~ 429 (431)
T cd07104 387 MVHINDQTVNDEPHVPFGGVKASGGGRFGGPASL-EEFTEWQWI 429 (431)
T ss_pred eEEECCCCCCCCCCCCCCCcccccCCccchHHHH-HHhhceeEE
Confidence 99999986543 23456 8999999999999 579998876
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-82 Score=661.47 Aligned_cols=396 Identities=29% Similarity=0.462 Sum_probs=363.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEE
Q 009397 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193 (535)
Q Consensus 114 L~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~ 193 (535)
|+++++.|++|+++|++++++|+||+..++. +|+..+++.++|+++.++........+. ......+++++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSD---RPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCC---CCCceeEEEEecccEEE
Confidence 5789999999999999999999999999995 7999999999999988776543211111 12235678899999999
Q ss_pred EEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--ccc
Q 009397 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVD 270 (535)
Q Consensus 194 ~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~ 270 (535)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.++ +.++|+|+|++|+|+|+. +.++.|+. .++
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~ 152 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI----VDEIGLPKGVFNLVLGRGETVGQELAGNPKVA 152 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH----HHHcCCCcccEEEEeCCChhHHHHHhcCCCcC
Confidence 99999999999999999999999999999999999999877766 456999999999999954 66888887 899
Q ss_pred EEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHH
Q 009397 271 KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350 (535)
Q Consensus 271 ~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~ 350 (535)
+|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|++
T Consensus 153 ~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~ 232 (409)
T PRK10090 153 MVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 232 (409)
T ss_pred EEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcc
Q 009397 351 QVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429 (535)
Q Consensus 351 ~L~~~~~~l~~G~~~~~-~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i 429 (535)
+|.++++++++|+|.++ ++++|||+++.++++++++|++++++|+++++||.+. ...|+|++|||+.+++++|++
T Consensus 233 ~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i 308 (409)
T PRK10090 233 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSI 308 (409)
T ss_pred HHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHH
Confidence 99999999999999987 8999999999999999999999999999999999752 235889999999999999999
Q ss_pred cccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCC
Q 009397 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDE 505 (535)
Q Consensus 430 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~ 505 (535)
++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+........|+ .||+|+
T Consensus 309 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~ 388 (409)
T PRK10090 309 MHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGG 388 (409)
T ss_pred HhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999997655444456 999999
Q ss_pred cCcHHHhhccCceeeee
Q 009397 506 FDSVHVILNDPTKLKML 522 (535)
Q Consensus 506 ~~g~~gl~~~~~~~k~~ 522 (535)
++|.+|| ++|++.|++
T Consensus 389 ~~g~~gl-~~f~~~k~v 404 (409)
T PRK10090 389 ADGKHGL-HEYLQTQVV 404 (409)
T ss_pred cchHHHH-HHhcceEEE
Confidence 9999999 578999986
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-81 Score=668.06 Aligned_cols=416 Identities=27% Similarity=0.422 Sum_probs=379.1
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCc
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~ 169 (535)
+++++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.++++++...++....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58899999999999999999999999999999999999999999999999999977899999999999999888775443
Q ss_pred ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 009397 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (535)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~ 249 (535)
.............++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ ++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~-----~lp~ 156 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK-----YLDK 156 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCc
Confidence 22211111234578899999999999999999999999999999999999999999999999888887653 4999
Q ss_pred CcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhc
Q 009397 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (535)
Q Consensus 250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~ 328 (535)
|++|+++++.+.+..|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.++
T Consensus 157 gv~~vv~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~ 236 (443)
T cd07132 157 ECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236 (443)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcC
Confidence 999999997766667777 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCC
Q 009397 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408 (535)
Q Consensus 329 GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~ 408 (535)
||.|++++|||||+++||+|+++|.+++++++.|++ ++.+++|||+++++++++++++++ +++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~----- 305 (443)
T cd07132 237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT----- 305 (443)
T ss_pred CCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-----
Confidence 999999999999999999999999999999998887 688899999999999999999863 589999973
Q ss_pred CCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEEC
Q 009397 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488 (535)
Q Consensus 409 ~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN 488 (535)
.+.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 23688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 489 DFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 489 ~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+..... ...|+ .||+|+++|.+|| ++|++.|++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~~~~k~v 424 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMGAYHGKYSF-DTFSHKRSC 424 (443)
T ss_pred CcccccCCCCCCCCCCCcccCCCcccHHHH-HHhccccEE
Confidence 875433 23355 9999999999999 589999987
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-80 Score=711.34 Aligned_cols=435 Identities=21% Similarity=0.356 Sum_probs=398.6
Q ss_pred CCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 009397 62 SETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (535)
Q Consensus 62 ~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~ 140 (535)
.+..++++||+| ++++++++.++.+|++.|+++|++|++.|+.+|..+|+++|+++++.|++++++|+.++++|+||++
T Consensus 657 ~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~ 736 (1318)
T PRK11809 657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTF 736 (1318)
T ss_pred CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCH
Confidence 466899999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEE
Q 009397 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (535)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV 220 (535)
.++ ..||..+++.++|++..+++.+ ....++|+|||++|+|||||+..+++++++||++||+||
T Consensus 737 ~~A-~~EV~eaidflryyA~~a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV 800 (1318)
T PRK11809 737 SNA-IAEVREAVDFLRYYAGQVRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVL 800 (1318)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEE
Confidence 999 5899999999999998765421 124688999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccC-----
Q 009397 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL----- 292 (535)
Q Consensus 221 ~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~----- 292 (535)
+|||+++|+++..++++ |.++|+|+|++|+|+|.+ +.++.|++ +|+.|+||||+++|+.|.+.+++++
T Consensus 801 ~KPseqTpl~a~~lv~l----l~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~ 876 (1318)
T PRK11809 801 AKPAEQTPLIAAQAVRI----LLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGR 876 (1318)
T ss_pred EeCCCCcHHHHHHHHHH----HHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccC
Confidence 99999999999887776 456999999999999976 56888987 9999999999999999999998876
Q ss_pred -CceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 009397 293 -TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371 (535)
Q Consensus 293 -~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~ 371 (535)
+|+++|+||||++||++|||+|.+++.+++|+|.++||.|++++++|||+++||+|+++|+++++++++|+|.+.++++
T Consensus 877 ~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdv 956 (1318)
T PRK11809 877 PIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDI 956 (1318)
T ss_pred ceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC--CHHH
Q 009397 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEE 449 (535)
Q Consensus 372 Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~--~~~e 449 (535)
||+|++.++++++++|++++++|++++.||..... ....|+|++|||+.. +++.++++|+||||++|++|+ +++|
T Consensus 957 GPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~-~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~lde 1033 (1318)
T PRK11809 957 GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSE-DWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDE 1033 (1318)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCC-CCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHH
Confidence 99999999999999999999999999988763221 124699999999973 678899999999999999996 7999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCC-CcCcHHHhhccCceee
Q 009397 450 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFD-EFDSVHVILNDPTKLK 520 (535)
Q Consensus 450 ai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G-~~~g~~gl~~~~~~~k 520 (535)
+|+++|+++|||+++|||+|.+.++++++++++|+|+||+..+.. ..||| .||+| +.||+++|.. |++-+
T Consensus 1034 aI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~-f~~~~ 1110 (1318)
T PRK11809 1034 LIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYR-LLATR 1110 (1318)
T ss_pred HHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHH-HhccC
Confidence 999999999999999999999999999999999999999865443 34567 89999 5799999964 44433
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=659.20 Aligned_cols=426 Identities=19% Similarity=0.225 Sum_probs=366.1
Q ss_pred ecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh-h-
Q 009397 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G- 146 (535)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~-~- 146 (535)
+||+||+++++++.++. ++++++|++||+.|+++|+.+|.++|+++++.|++|+++|++++++|+||++.++.. +
T Consensus 70 ~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gk 146 (551)
T TIGR02288 70 RSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGG 146 (551)
T ss_pred cCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccC
Confidence 79999999999999996 899999999999999999999999999999999999999999999999999988731 3
Q ss_pred --hHHHHHHHHHHHHHhchhhcCCcc--cCCCcc-cccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEE
Q 009397 147 --EIMTTCEKITWLLSEGEKWLKPEY--RSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (535)
Q Consensus 147 --Ei~~~~~~l~~~~~~~~~~l~~~~--~~~~~~-~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~ 221 (535)
++...++.++|++....+...... .+.+.. ......+++++|+|||++|+|||||+++.++++++||++||+||+
T Consensus 147 p~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVl 226 (551)
T TIGR02288 147 PHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLV 226 (551)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEE
Confidence 778889999998887665432211 011100 001122457899999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-c-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceee
Q 009397 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297 (535)
Q Consensus 222 kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~ 297 (535)
|||+.+|+++.++.+++.++|.++|+|+|+||+|++. + +.++.|+. .++.|.||||+.+|++|++.++ .+++++
T Consensus 227 KPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~l 304 (551)
T TIGR02288 227 KPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYT 304 (551)
T ss_pred ECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEe
Confidence 9999999999988888989999999999999999985 3 67888887 8999999999999999999876 489999
Q ss_pred ccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecc---------cHHHHHHHHHHHHhcccCCCCCCCC
Q 009397 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGK 368 (535)
Q Consensus 298 elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~---------v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (535)
|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|+|||++ +||+|+++|+++++++ +|+|.++.
T Consensus 305 ElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~ 383 (551)
T TIGR02288 305 EKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARAT 383 (551)
T ss_pred ecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccc
Confidence 9999999999999999999999999999999999999999999999 7999999999999999 99999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHH
Q 009397 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (535)
Q Consensus 369 ~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 448 (535)
+++|||+++++++++ ++++++| ++++||....++..+.++|++|||+....++|++++||+||||++|++|+|.|
T Consensus 384 ~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~d 458 (551)
T TIGR02288 384 AVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGA 458 (551)
T ss_pred ccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHH
Confidence 999999999999995 5677788 67777765444433344689999994333499999999999999999999999
Q ss_pred HHHHHhhcC--CCC-cEEEEecCCHHHHHHHHhhc----------CcceEEECCCCccccCCCCCCCCCCcC
Q 009397 449 EVVKLANDS--RYG-LGCAVFSGSQHRAREIAAQI----------QCGVAAINDFASNYMCQVFKCIFDEFD 507 (535)
Q Consensus 449 eai~~~n~~--~~g-L~asvfs~d~~~~~~~a~~l----------~~G~v~IN~~~~~~~~~~~~SG~G~~~ 507 (535)
|||+++|++ +|| |+++|||+|.++++++.+++ ++|.|+||....+.... .||....+
T Consensus 459 eAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~--~sg~n~~a 528 (551)
T TIGR02288 459 HAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFH--GTGGNPAA 528 (551)
T ss_pred HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCC--CCCCCCcc
Confidence 999999998 566 99999999999999999998 55666666543333322 45544433
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=650.76 Aligned_cols=416 Identities=30% Similarity=0.448 Sum_probs=376.6
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCc
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~ 169 (535)
+++++|++||..|+++|..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.++++++..+++..+.
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 48999999999999999999999999999999999999999999999999888766799999999999998877665433
Q ss_pred ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 009397 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (535)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~ 249 (535)
..............++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++. + |+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~----~-~~P~ 156 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIP----K-YFDP 156 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH----H-hCCC
Confidence 2211111123456889999999999999999999999999999999999999999999999988777654 3 6999
Q ss_pred CcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhc
Q 009397 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (535)
Q Consensus 250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~ 328 (535)
|++|+++|+.+.+..|++ .++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.++
T Consensus 157 gv~~vv~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~ 236 (426)
T cd07087 157 EAVAVVEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNA 236 (426)
T ss_pred CEEEEEeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhcc
Confidence 999999997777888888 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCC
Q 009397 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408 (535)
Q Consensus 329 GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~ 408 (535)
||.|++++|||||+++||+|+++|.+++++++.|+| ++.+++||++++.++++++++++++ ++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~----- 305 (426)
T cd07087 237 GQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV----- 305 (426)
T ss_pred CCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-----
Confidence 999999999999999999999999999999986666 4688999999999999999999764 89999973
Q ss_pred CCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEEC
Q 009397 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488 (535)
Q Consensus 409 ~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN 488 (535)
...|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 385 (426)
T cd07087 306 DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVN 385 (426)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEEC
Confidence 23588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 489 DFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 489 ~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+..... ...|+ .||+|+++|.+|| ++|++.|.+
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~~~~k~~ 424 (426)
T cd07087 386 DVLLHAAIPNLPFGGVGNSGMGAYHGKAGF-DTFSHLKSV 424 (426)
T ss_pred CcccccCCCCCCCCCCCcccCCCccCHHHH-HHhccceee
Confidence 875332 33455 9999999999999 589999876
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-79 Score=655.30 Aligned_cols=437 Identities=19% Similarity=0.217 Sum_probs=387.9
Q ss_pred CCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 009397 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 138 (535)
Q Consensus 59 ~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk 138 (535)
...++....++||.|++.+++++.+ |++.+|++|++|++.|+++|+.+|.++|++++++|.+++++|++++++|+||
T Consensus 60 ~~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk 136 (549)
T cd07127 60 PGASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQ 136 (549)
T ss_pred CCCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCC
Confidence 3445789999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred Chhhhhh--h--hHHHHHHHHHHHHHhchhhcCC------cccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 139 TMVDASL--G--EIMTTCEKITWLLSEGEKWLKP------EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 139 ~~~ea~~--~--Ei~~~~~~l~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++.++.. + |+..+++.++|+.+...+.... +.+..... . ....+++|+||+++|+|||||+++.+.+
T Consensus 137 ~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~-~--~k~~~~~P~GVv~vI~p~nfP~~~~~~~ 213 (549)
T cd07127 137 AFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLA-M--EKTFTVVPRGVALVIGCSTFPTWNGYPG 213 (549)
T ss_pred CHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCccccc-c--cceeEEecccEEEEEeCcCChHHHHHHH
Confidence 9988742 1 7999999999998877664321 11111111 1 1245789999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc--cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
+++||++||+||+|||+.+++++.++.++++++|.++|+|+|+||+|++.+ +.++.|+. .+++|.||||+.+|++|
T Consensus 214 i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i 293 (549)
T cd07127 214 LFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWL 293 (549)
T ss_pred HHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHH
Confidence 999999999999999999999999889999999999999999999999854 57888887 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecc---------cHHHHHHHHHHH
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKI 355 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~---------v~d~f~~~L~~~ 355 (535)
++.++ .+|+++|+|||||+||++|+|++.+++.+++|+|.++||.|++++|+|||++ +||+|+++|+++
T Consensus 294 ~~~a~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~ 371 (549)
T cd07127 294 EANAR--QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAA 371 (549)
T ss_pred HHHhc--cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHH
Confidence 99987 4799999999999999999999999999999999999999999999999999 899999999999
Q ss_pred HhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccc
Q 009397 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 435 (535)
Q Consensus 356 ~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~f 435 (535)
++++ +|+|.+..+++|||+++++++++++ +++.|+ +++||....+|..+.++|++|||+.+++++|++++||+|
T Consensus 372 ~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~F 445 (549)
T cd07127 372 IDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERF 445 (549)
T ss_pred HHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCc
Confidence 9999 9999999999999999999999865 555665 888887655554455567799999988899999999999
Q ss_pred cceeeeeecCCHHHHHHHhhcCC--C-CcEEEEecCCHHHHHHHHhhc-Ccc-eEEECCCCccccCCC--C----CCCCC
Q 009397 436 GPIMPIMKFNTDEEVVKLANDSR--Y-GLGCAVFSGSQHRAREIAAQI-QCG-VAAINDFASNYMCQV--F----KCIFD 504 (535)
Q Consensus 436 gPvl~v~~~~~~~eai~~~n~~~--~-gL~asvfs~d~~~~~~~a~~l-~~G-~v~IN~~~~~~~~~~--~----~SG~G 504 (535)
|||++|++|+|.+|||+++|++. + ||++||||+|.+.++++.+++ ++| +++||+++..|.+|+ | .||..
T Consensus 446 GPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n 525 (549)
T cd07127 446 GPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGAN 525 (549)
T ss_pred CceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCC
Confidence 99999999999999999999984 4 699999999999999999984 555 999999999999998 4 66666
Q ss_pred CcCcH
Q 009397 505 EFDSV 509 (535)
Q Consensus 505 ~~~g~ 509 (535)
..+|.
T Consensus 526 ~~a~~ 530 (549)
T cd07127 526 PAANA 530 (549)
T ss_pred ccccc
Confidence 55554
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-79 Score=703.22 Aligned_cols=435 Identities=21% Similarity=0.358 Sum_probs=401.4
Q ss_pred CCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 009397 63 ETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (535)
Q Consensus 63 ~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ 141 (535)
+..++++||+| ++++++++.++++|++++|++|++|++.|+.+|+++|.++|+++++.|++++++|++++++|+||++.
T Consensus 566 ~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ 645 (1208)
T PRK11905 566 GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLA 645 (1208)
T ss_pred CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 56789999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEE
Q 009397 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (535)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~ 221 (535)
++ ..||..+++.++|++..+++... ...++|+|||++|+|||||+..+++++++||++||+||+
T Consensus 646 ea-~~Ev~eaid~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~ 709 (1208)
T PRK11905 646 NA-IAEVREAVDFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLA 709 (1208)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEE
Confidence 99 58999999999999988765321 135679999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhcc---CCce
Q 009397 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPV 295 (535)
Q Consensus 222 kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~---~~pv 295 (535)
|||+++|+++..++++ |.++|+|+|++|+|+|++ +.++.|++ +++.|.||||+++|+.|.+.++++ .+|+
T Consensus 710 KPse~tpl~a~~l~~l----l~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pl 785 (1208)
T PRK11905 710 KPAEQTPLIAARAVRL----LHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL 785 (1208)
T ss_pred eCCcccHHHHHHHHHH----HHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeE
Confidence 9999999999887776 556999999999999976 47888987 999999999999999999999876 4899
Q ss_pred eeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccC
Q 009397 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 375 (535)
Q Consensus 296 ~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli 375 (535)
++|+|||||+||++|||+|.+++.+++|+|.++||.|++++++|||+++||+|+++|+++++++++|+|.+.++++||+|
T Consensus 786 i~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvI 865 (1208)
T PRK11905 786 IAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVI 865 (1208)
T ss_pred EEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC--CHHHHHHH
Q 009397 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKL 453 (535)
Q Consensus 376 ~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~ 453 (535)
++.++++++++|++++++|++++.|+... ....|+|+.|||+. + ++|.++++|+||||++|++|+ +++|+|++
T Consensus 866 d~~a~~~i~~~I~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~ 940 (1208)
T PRK11905 866 DAEAQANIEAHIEAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDD 940 (1208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEccCCC---CCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHH
Confidence 99999999999999999999888776421 12469999999996 3 678999999999999999997 69999999
Q ss_pred hhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-CcCcHHHhhccCceeeeec
Q 009397 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD-EFDSVHVILNDPTKLKMLP 523 (535)
Q Consensus 454 ~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G-~~~g~~gl~~~~~~~k~~~ 523 (535)
+|+++|||+++|||+|.+.++++++++++|+|+||+..+... .||| .||+| +.+|+++|. .|++.|.++
T Consensus 941 iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~-~f~~~k~v~ 1016 (1208)
T PRK11905 941 INATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLG-RLVREAPTP 1016 (1208)
T ss_pred HhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHH-HHhhcceee
Confidence 999999999999999999999999999999999999765443 4577 79999 599999994 788888773
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-76 Score=631.50 Aligned_cols=416 Identities=20% Similarity=0.243 Sum_probs=367.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhh--
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW-- 165 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~-- 165 (535)
+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+||+..++. +|+..+++.+++++...++.
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999999999999999999999998884 89999999999999876542
Q ss_pred cCCccc---CCCcccccccceeeeecceEEEEEcCCchhhhh--hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHH
Q 009397 166 LKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN--IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240 (535)
Q Consensus 166 l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~--~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~ 240 (535)
...... +..........+++++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++.++.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 111100 000001123357889999999999999999987 458999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhc--cCCceeeccCCcceEEEecCC---C
Q 009397 241 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIVCDDV---D 312 (535)
Q Consensus 241 ~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~--~~~pv~~elgGk~p~iV~~da---D 312 (535)
+|.++|+|+|++|+|+|+. +.++.|++ .++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+ |
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d 239 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER 239 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence 9999999999999999965 67888887 89999999999999999999998 699999999999999999999 8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009397 313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 391 (535)
Q Consensus 313 l~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~ 391 (535)
++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|.++++++++| |++++...++..+.|++++
T Consensus 240 l~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~ 309 (454)
T cd07129 240 GEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALA 309 (454)
T ss_pred HHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999998764 5667777788889999999
Q ss_pred Hc-CCcEeccCCCCCCCCCCCCceeccEEEEcCC---CCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEec
Q 009397 392 DK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (535)
Q Consensus 392 ~~-Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs 467 (535)
++ |+++++||.+. ..|+|++|||+...+ ++|+++++|+||||++|++|+|.||+|+++|+++|||++||||
T Consensus 310 ~~~ga~~l~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft 384 (454)
T cd07129 310 AAPGVRVLAGGAAA-----EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHG 384 (454)
T ss_pred hcCCcEEEeCCCcC-----CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEc
Confidence 98 99999999732 368999999998665 6899999999999999999999999999999999999999999
Q ss_pred CC--HHHHHHHHhhc--CcceEEECCCCcccc---CCCC-----CCCCCCc--CcHHHhhccCceee
Q 009397 468 GS--QHRAREIAAQI--QCGVAAINDFASNYM---CQVF-----KCIFDEF--DSVHVILNDPTKLK 520 (535)
Q Consensus 468 ~d--~~~~~~~a~~l--~~G~v~IN~~~~~~~---~~~~-----~SG~G~~--~g~~gl~~~~~~~k 520 (535)
+| .+.+++++++| ++|+|+||+...... ..|+ .||+||+ +|.+|++ +|++..
T Consensus 385 ~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~-~~~~~~ 450 (454)
T cd07129 385 EEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIE-RFLRPV 450 (454)
T ss_pred cCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHH-Hhcccc
Confidence 99 79999999999 699999998643221 2334 6999999 7999995 666653
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-76 Score=626.17 Aligned_cols=414 Identities=17% Similarity=0.187 Sum_probs=362.2
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhc-C
Q 009397 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL-K 167 (535)
Q Consensus 89 ~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l-~ 167 (535)
++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+. ++ ..|+..+++.++|++..+.... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhcccc
Confidence 6799999999999999999999999999999999999999999999999999 66 4799999999999988776431 1
Q ss_pred Cccc-CCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 009397 168 PEYR-SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (535)
Q Consensus 168 ~~~~-~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG 246 (535)
.... .... ......+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.+++ .++|
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l----~~ag 154 (442)
T cd07084 80 HEPGNHLGQ-GLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLL----HYAG 154 (442)
T ss_pred ccccccCCC-CccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHH----HHhC
Confidence 1100 0000 01235678999999999999999999999999999999999999999999999998877775 4588
Q ss_pred C-CCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCC-CHHHHHHHHHH
Q 009397 247 A-PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVR 322 (535)
Q Consensus 247 ~-p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~da-Dl~~aa~~i~~ 322 (535)
+ |++++++++|+.+.+..|++ +++.|+||||+++++.|++.+++ +|+++|+|||||+||++|+ |++.+++.+++
T Consensus 155 ~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~ 232 (442)
T cd07084 155 LLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQ 232 (442)
T ss_pred CCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHH
Confidence 8 99999999997777888887 89999999999999999998875 8999999999999999999 69999999999
Q ss_pred HHHHhcCCCCCCccEEEEecc-cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCcEecc
Q 009397 323 AALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILAR 400 (535)
Q Consensus 323 ~~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~-Ga~~l~g 400 (535)
++|.++||.|++++|||||++ ++|+|+++|.++++++++| ++++||++++ +++++|++++++ |+++++|
T Consensus 233 ~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 233 DMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred HHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeC
Confidence 999999999999999999999 9999999999999999998 5789999765 466667777778 5999999
Q ss_pred CCCCCCCC--CCCCceeccEEEEcCCCCC---cccccccccceeeeeecCC--HHHHHHHhhcCCCCcEEEEecCCHHHH
Q 009397 401 GSFGHLSE--GAVDQYFPPTVIVNVNHTM---KLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRA 473 (535)
Q Consensus 401 G~~~~~~~--~~~g~~~~Ptvl~~v~~~~---~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~asvfs~d~~~~ 473 (535)
|.+...+. ...|+|++|||+.+++++| ++++||+||||++|++|+| .+|+|+++|+++|||++||||+|.+.+
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 97543211 2258999999999999998 9999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhc-CcceEEECCCC-cccc-CCCC-----CCCCCCcC-cHHHhhccCceeee
Q 009397 474 REIAAQI-QCGVAAINDFA-SNYM-CQVF-----KCIFDEFD-SVHVILNDPTKLKM 521 (535)
Q Consensus 474 ~~~a~~l-~~G~v~IN~~~-~~~~-~~~~-----~SG~G~~~-g~~gl~~~~~~~k~ 521 (535)
+++++++ ++|+|+||+++ .... ..++ .||+|++. |.+++ +.|++...
T Consensus 384 ~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~-~~~~~~~~ 439 (442)
T cd07084 384 QELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAI-KLVWRCHA 439 (442)
T ss_pred HHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHh-hheeeeee
Confidence 9999999 99999999772 2222 2223 79999996 99999 56777654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-76 Score=581.58 Aligned_cols=419 Identities=26% Similarity=0.426 Sum_probs=389.9
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcC
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~ 167 (535)
+++.++++|.+|.+-++.|.+-|.+.|.++.+.+++|.++|.+++..|.+|+..++...|+...++.++++.++..+|.+
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 009397 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~ 247 (535)
+++.+.++.....+.+++.+|+|||++|+|||||+...+.++++||+|||+||+||||.+|.++.++++++.++ +
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-----l 158 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-----L 158 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-----c
Confidence 98887776656678899999999999999999999999999999999999999999999999999999998876 7
Q ss_pred CCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHH
Q 009397 248 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 248 p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~ 326 (535)
|.+++++|.|..+..-.|.+ +.|+|.||||+.+|+.|+.+++++++||++|||||+|++|++|+|++-+++.|++|++.
T Consensus 159 d~~~~~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~ 238 (477)
T KOG2456|consen 159 DQDLIRVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWM 238 (477)
T ss_pred CcceEEEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhc
Confidence 99999999998755555555 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC
Q 009397 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~ 406 (535)
|+||.|++++.|+++.+++.+|+++++..+++. .|....+..|++.||+..+|+|+..++++. .++++||+.
T Consensus 239 N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~--- 310 (477)
T KOG2456|consen 239 NSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES--- 310 (477)
T ss_pred cCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc---
Confidence 999999999999999999999999999999998 477777888999999999999999999753 689999983
Q ss_pred CCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEE
Q 009397 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486 (535)
Q Consensus 407 ~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~ 486 (535)
.....|++||||.||+++.++|+||+|||||+|+.++|++|+|+.+|+.+-.|++++||+|.+...++.+++.+|-|.
T Consensus 311 --d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt 388 (477)
T KOG2456|consen 311 --DESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVT 388 (477)
T ss_pred --chhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCee
Confidence 355679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCccccCCC--C----CCCCCCcCcHHHhhccCceeeee
Q 009397 487 INDFASNYMCQV--F----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 487 IN~~~~~~~~~~--~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+||...+..... | .||+||++|++|+ +.|+--|.+
T Consensus 389 ~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sF-dTFSH~k~~ 429 (477)
T KOG2456|consen 389 VNDVIMHVTLDSLPFGGVGESGMGRYHGKFSF-DTFSHEKSC 429 (477)
T ss_pred ecceEEEEEeeccCcCCcCccccccccccccc-cccccchhh
Confidence 999766554432 3 9999999999999 677777765
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-76 Score=620.48 Aligned_cols=406 Identities=17% Similarity=0.163 Sum_probs=344.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHH--HHHHHHhchhh
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK--ITWLLSEGEKW 165 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~--l~~~~~~~~~~ 165 (535)
+++++++|++||+.|+++|+.+|.++|+++++.|++|+++|++++++|+||++.+++ .|+...... .++++...
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~~~--- 76 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKDEK--- 76 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhccc---
Confidence 478999999999999999999999999999999999999999999999999999985 455544432 23322111
Q ss_pred cCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhc
Q 009397 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245 (535)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~a 245 (535)
..+..+.. .....+++++|+|||++|+|||||+...++++++||++||+||+|||+++|+++.++.+++.++|.++
T Consensus 77 -~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a 152 (439)
T cd07081 77 -TCGVLTGD---ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA 152 (439)
T ss_pred -cCceecCC---CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence 11111111 12235789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHH
Q 009397 246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322 (535)
Q Consensus 246 G~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~ 322 (535)
|+|+|++|+|++.. +.++.|++ +|++|+||||++ +++.+++++||+++|+|||||+||++|||++.|++.+++
T Consensus 153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~ 228 (439)
T cd07081 153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK 228 (439)
T ss_pred CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence 99999999999854 67888988 899999999988 566778899999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCC
Q 009397 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402 (535)
Q Consensus 323 ~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~ 402 (535)
|+|+++||.|++.+|+|||+++||+|+++|.+++ ||+++.++.++++++|+++.++|++++ ||.
T Consensus 229 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~ 292 (439)
T cd07081 229 SKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQD 292 (439)
T ss_pred HHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCC
Confidence 9999999999999999999999999999999963 789999999999999999999999875 443
Q ss_pred CCCCCCCCCCceeccE---EEEcCC--CCCcccccccccceeeeeecCCHHHHHHHhhcC----CCCcEEEEecCC---H
Q 009397 403 FGHLSEGAVDQYFPPT---VIVNVN--HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGS---Q 470 (535)
Q Consensus 403 ~~~~~~~~~g~~~~Pt---vl~~v~--~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gL~asvfs~d---~ 470 (535)
.... ....|+|++|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .
T Consensus 293 ~~~~-~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~ 371 (439)
T cd07081 293 AYKI-AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAI 371 (439)
T ss_pred HHHH-HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchH
Confidence 1110 11358899998 999988 999999999999999999999999999999975 799999999999 9
Q ss_pred HHHHHHHhhcCcceEEECCCCccccC---CC------CCCCCCCcCcHHHhhc----cCceeeee
Q 009397 471 HRAREIAAQIQCGVAAINDFASNYMC---QV------FKCIFDEFDSVHVILN----DPTKLKML 522 (535)
Q Consensus 471 ~~~~~~a~~l~~G~v~IN~~~~~~~~---~~------~~SG~G~~~g~~gl~~----~~~~~k~~ 522 (535)
++++++++++++|+|+||+...+... +. +.-|.|.++|...-.| +++++|.+
T Consensus 372 ~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
T cd07081 372 ENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTV 436 (439)
T ss_pred HHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeee
Confidence 99999999999999999976422211 11 1345666666554422 55666654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-76 Score=621.93 Aligned_cols=407 Identities=19% Similarity=0.261 Sum_probs=352.1
Q ss_pred HHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchh
Q 009397 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK 164 (535)
Q Consensus 85 ~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~ 164 (535)
-+|++.++++|++||+.|+++|..+|.++|+++++.|++|.++|++++++|+||+..++. +++++++++....
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~ 75 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPG 75 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCc
Confidence 478999999999999999999999999999999999999999999999999999987763 4556665543211
Q ss_pred h--cCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 009397 165 W--LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (535)
Q Consensus 165 ~--l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l 242 (535)
. +.+..... .....+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.+++++++++|
T Consensus 76 ~~~~~~~~~~~----~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~ 151 (429)
T cd07121 76 TEDLTTTAWSG----DNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAI 151 (429)
T ss_pred ccccccccccC----CCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHH
Confidence 0 11100000 11235788999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHH
Q 009397 243 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319 (535)
Q Consensus 243 ~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~ 319 (535)
.++|+|+|++|+|++.. +.++.|++ +|++|+||||+.+|+.|++. .+|+++|+|||||+||++|||++.|++.
T Consensus 152 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~ 227 (429)
T cd07121 152 AEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARD 227 (429)
T ss_pred HHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHH
Confidence 99999999999999854 67888888 79999999999999999875 4999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc--CCcE
Q 009397 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK--GAEI 397 (535)
Q Consensus 320 i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~--Ga~~ 397 (535)
+++|+|.|+||.|++++|||||+++||+|+++|+++ + .+++++++.++++++|+++++. |+++
T Consensus 228 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~ 292 (429)
T cd07121 228 IVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKK 292 (429)
T ss_pred HHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccccc
Confidence 999999999999999999999999999999999886 1 1378999999999999999865 7999
Q ss_pred eccCCCCCCCCCCCCceec---cEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc--EEEEecCCHHH
Q 009397 398 LARGSFGHLSEGAVDQYFP---PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHR 472 (535)
Q Consensus 398 l~gG~~~~~~~~~~g~~~~---Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL--~asvfs~d~~~ 472 (535)
++||.+... ....|.|++ |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++
T Consensus 293 ~~gg~~~~~-~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~ 371 (429)
T cd07121 293 WVGKDASKI-LKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371 (429)
T ss_pred ccCcCHHHH-HHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHH
Confidence 999863110 012467766 599999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHhhcCcceEEECCCCccccCCCC-CCCCCCc--CcHHHhhccCceeeeecCCC
Q 009397 473 AREIAAQIQCGVAAINDFASNYMCQVF-KCIFDEF--DSVHVILNDPTKLKMLPHFS 526 (535)
Q Consensus 473 ~~~~a~~l~~G~v~IN~~~~~~~~~~~-~SG~G~~--~g~~gl~~~~~~~k~~~~~~ 526 (535)
++++++++++|+|+||+... ...|+ .+|.++| +|++|. ..+..|.+..++
T Consensus 372 a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~~--~~~~~~~~~~~~ 424 (429)
T cd07121 372 LTKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTGE--GLTSARTFTRRR 424 (429)
T ss_pred HHHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcCc--CccChhhhheee
Confidence 99999999999999998643 33345 7777788 888882 456666665544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-74 Score=615.35 Aligned_cols=422 Identities=34% Similarity=0.540 Sum_probs=389.4
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCC
Q 009397 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168 (535)
Q Consensus 89 ~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~ 168 (535)
++++++|++|++.|+++|..+|.++|+++++.|.+++++|+++++.|+||+..++ ..|+..+++.+++++...+++..+
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~-~~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEA-LGEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3689999999999999999999999999999999999999999999999988776 589999999999999888776654
Q ss_pred cccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCC
Q 009397 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248 (535)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p 248 (535)
..... ..+...+.+++|+|||++|.|||||+.+.++++++||++||+||+|||+.+|+++..+.++ |.++|+|
T Consensus 80 ~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~----l~~ag~p 152 (432)
T cd07078 80 VIPSP---DPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAEL----LAEAGLP 152 (432)
T ss_pred ccccc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHHcCCC
Confidence 43211 1345678899999999999999999999999999999999999999999999999987776 4568999
Q ss_pred CCcEEEEeCCcc-chhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHH
Q 009397 249 ENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325 (535)
Q Consensus 249 ~~~v~~v~~~~~-~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f 325 (535)
++++++++++.+ .+..|+. .++.|.||||..+++.|.+.++++++|+++|+|||+++||++|+|++.+++.+++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~ 232 (432)
T cd07078 153 PGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232 (432)
T ss_pred cCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 999999998764 6777877 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCC
Q 009397 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405 (535)
Q Consensus 326 ~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~ 405 (535)
.++||.|+++++||||++++|+|+++|.++++++++|+|+++++++||+++++++++++++|+++.++|+++++||....
T Consensus 233 ~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~ 312 (432)
T cd07078 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLE 312 (432)
T ss_pred hccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceE
Q 009397 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485 (535)
Q Consensus 406 ~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v 485 (535)
. +.|.|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+.++||+++|||+|.+.+++++.++++|+|
T Consensus 313 ~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v 389 (432)
T cd07078 313 G---GKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTV 389 (432)
T ss_pred C---CCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceE
Confidence 2 1589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCcc-ccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 486 AINDFASN-YMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 486 ~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+||+.... ...+|+ .||+|+++|++|+ +.|++.|++
T Consensus 390 ~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~-~~~~~~k~v 430 (432)
T cd07078 390 WINDYSVGAEPSAPFGGVKQSGIGREGGPYGL-EEYTEPKTV 430 (432)
T ss_pred EECCCCCCCCCCCCcCCcCcCcCCccchHHHH-HHhhceEEE
Confidence 99998776 334455 9999999999999 578888876
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=608.16 Aligned_cols=406 Identities=20% Similarity=0.256 Sum_probs=347.1
Q ss_pred CCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhc
Q 009397 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (535)
Q Consensus 83 ~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (535)
...+|+++++++|++|+..|+.+|..+|.++|+++++.|++|+++|++++++|+||+..+++. +.+++++++.
T Consensus 33 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~ 105 (465)
T PRK15398 33 GVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKT 105 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHh
Confidence 567899999999999999999999999999999999999999999999999999999988752 3445555443
Q ss_pred h--hhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHH
Q 009397 163 E--KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240 (535)
Q Consensus 163 ~--~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~ 240 (535)
. ..+....... ......++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++++
T Consensus 106 ~~~~~~~~~~~~~----~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 106 PGVEDLTTEALTG----DNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred ccccccccCcccC----CCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 2 1111111111 123457888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHH
Q 009397 241 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 317 (535)
Q Consensus 241 ~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa 317 (535)
+|.++|+|+|++|++++. .+.++.|++ ++|+|+||||+.+|+.|++ +.+|+++|+|||||+||++|||++.|+
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa 257 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAA 257 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHH
Confidence 999999999999999985 467888888 7999999999999999998 359999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcE
Q 009397 318 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397 (535)
Q Consensus 318 ~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~ 397 (535)
+.+++|+|.|+||.|++++|||||+++||+|+++|+++. ++++++.++++++++++++.++++++
T Consensus 258 ~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~ 322 (465)
T PRK15398 258 RDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKK 322 (465)
T ss_pred HHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchh
Confidence 999999999999999999999999999999999999861 26899999999999999755456678
Q ss_pred eccCCCCCCCCCCCCcee---ccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc--EEEEecCCHHH
Q 009397 398 LARGSFGHLSEGAVDQYF---PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHR 472 (535)
Q Consensus 398 l~gG~~~~~~~~~~g~~~---~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL--~asvfs~d~~~ 472 (535)
+.||..... ....|.++ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++
T Consensus 323 ~~g~~~~~i-~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~ 401 (465)
T PRK15398 323 WVGKDAAKI-LEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN 401 (465)
T ss_pred hhCCCHHHH-HHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence 777642100 00135555 4899999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHhhcCcceEEECCCCccccCCCC-CCCCCCc--CcHHHhhccCceeeeec
Q 009397 473 AREIAAQIQCGVAAINDFASNYMCQVF-KCIFDEF--DSVHVILNDPTKLKMLP 523 (535)
Q Consensus 473 ~~~~a~~l~~G~v~IN~~~~~~~~~~~-~SG~G~~--~g~~gl~~~~~~~k~~~ 523 (535)
++++++++++|+|+||++. + ...|+ ..|...+ +|++| +..|..|++.
T Consensus 402 a~~~a~~l~~G~V~iN~~~-~-~~~p~gg~~~s~~~~~~~~g--~~~~~~~~~~ 451 (465)
T PRK15398 402 LNKMARAIQTSIFVKNGPS-Y-AGLGLGGEGFTTFTIATPTG--EGVTSARTFT 451 (465)
T ss_pred HHHHHHhCCceEEEECCCC-c-cccCcCCCCCceeeecccCC--CCccchhhhh
Confidence 9999999999999999864 2 22334 3344445 68888 3567777764
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-73 Score=599.42 Aligned_cols=377 Identities=19% Similarity=0.215 Sum_probs=336.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHH-HHHHHHHhchhhc
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE-KITWLLSEGEKWL 166 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~-~l~~~~~~~~~~l 166 (535)
+++++++|++||..|+++|..+|.++|+++++.|++++++|++++++|+||++.+++..|+..+++ .+++++.. +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 478999999999999999999999999999999999999999999999999999997558888887 67777742 211
Q ss_pred CCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 009397 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG 246 (535)
.. ..+. .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.++++++|.++|
T Consensus 79 g~-~~~~----~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 GV-IEED----EEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred ee-eccC----CCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 11 1111 123467889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHH
Q 009397 247 APENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 323 (535)
Q Consensus 247 ~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~ 323 (535)
+|+|++|++++.. +.++.|++ +++.|.||||+.++ +.++++++|+++|+|||||+||++|||++.|++.+++|
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 9999999999854 67888887 89999999999965 44567889999999999999999999999999999999
Q ss_pred HHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc-------cCCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009397 324 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV-------SAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (535)
Q Consensus 324 ~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l-------~~G~~~-~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga 395 (535)
+|.|+||.|++++|||||+++||+|+++|+++...+ ++|++. +.++++||+++..+.+++.+++..++.+|+
T Consensus 230 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga 309 (436)
T cd07122 230 KTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDT 309 (436)
T ss_pred hhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCC
Confidence 999999999999999999999999999999999887 888884 667789999999888888888877777777
Q ss_pred cEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcC----CCCcEEEEecCCHH
Q 009397 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGSQH 471 (535)
Q Consensus 396 ~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gL~asvfs~d~~ 471 (535)
+++.|+ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+
T Consensus 310 ~vl~~~------------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~ 370 (436)
T cd07122 310 KVLVAE------------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEE 370 (436)
T ss_pred eEEEEe------------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHH
Confidence 777666 34788899987 56799999999999999999999997 89999999999999
Q ss_pred HHHHHHhhcCcceEEECCCCccc
Q 009397 472 RAREIAAQIQCGVAAINDFASNY 494 (535)
Q Consensus 472 ~~~~~a~~l~~G~v~IN~~~~~~ 494 (535)
+++++++++++|+|+||+...+.
T Consensus 371 ~a~~~~~~l~aG~V~IN~~~~~~ 393 (436)
T cd07122 371 VIEEFALRMPVSRILVNTPSSLG 393 (436)
T ss_pred HHHHHHhhCCceEEEEeCCcccc
Confidence 99999999999999999876543
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-72 Score=600.64 Aligned_cols=411 Identities=16% Similarity=0.145 Sum_probs=358.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHh
Q 009397 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 82 ~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
..+.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..+++..+...+.+.+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 46789999999999999999999999999999999999999999999999999999999887544444566667665543
Q ss_pred chhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 009397 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (535)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~ 241 (535)
.+. .. . .... .+...+..++|+|||++|.|||||+....+++++||++||+||+|||+.+|+++..++++++++
T Consensus 84 ~~~-~G-~-~~~~---~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~ 157 (488)
T TIGR02518 84 MKT-IG-I-LSED---KEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKA 157 (488)
T ss_pred Ccc-cc-e-ecCC---CCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHH
Confidence 222 11 1 1111 1334677899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHH
Q 009397 242 LAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~ 318 (535)
|.++|+|+|++|+|++.. +.++.|++ +|++|+||||+.++ +.++++++|+++|+|||+|+||++|||++.|++
T Consensus 158 l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~ 233 (488)
T TIGR02518 158 AEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVR 233 (488)
T ss_pred HHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHH
Confidence 999999999999999854 77888887 89999999999965 444557899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHH-------HhcccCCCC-CCCCCcccccCCHHHHHHHHHHHHHH
Q 009397 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI-------VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDA 390 (535)
Q Consensus 319 ~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~-------~~~l~~G~~-~~~~~~~Gpli~~~~~~~l~~~i~~a 390 (535)
.+++|+|+++||.|++.+|||||+++||+|+++|+++ .+++++|+| .++++++||+++.++++++.++++++
T Consensus 234 ~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~a 313 (488)
T TIGR02518 234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLT 313 (488)
T ss_pred HHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccc
Confidence 9999999999999999999999999999999999999 899999996 57889999999999999999999999
Q ss_pred HHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhc----CCCCcEEEEe
Q 009397 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCAVF 466 (535)
Q Consensus 391 ~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gL~asvf 466 (535)
+.+|+++++||.+ +++++|++ ++|.||||++|++|+|+||||+++|+ .+|||+++||
T Consensus 314 v~~gakll~gg~~------------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~ 374 (488)
T TIGR02518 314 VPEDAKVLIGEQN------------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIH 374 (488)
T ss_pred cCCCCEEEEeCCC------------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEE
Confidence 9999999999962 35778886 79999999999999999999999988 6899999999
Q ss_pred cCCHHHHHHHHhhcCcceEEECCCC------ccccCCC-CCCCCCCcCcH-----HHhhccCceeeee
Q 009397 467 SGSQHRAREIAAQIQCGVAAINDFA------SNYMCQV-FKCIFDEFDSV-----HVILNDPTKLKML 522 (535)
Q Consensus 467 s~d~~~~~~~a~~l~~G~v~IN~~~------~~~~~~~-~~SG~G~~~g~-----~gl~~~~~~~k~~ 522 (535)
|+|.++++++++++++|+|+||++. ..+..++ +.-|+|.++|. -|+ +++++.|++
T Consensus 375 T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~~~v~~-~~l~~~k~v 441 (488)
T TIGR02518 375 SENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTSDNITP-ENLINIRRV 441 (488)
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCCCCCCH-HHhheeeEE
Confidence 9999999999999999999999764 2222222 24455555543 455 578999997
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-71 Score=584.23 Aligned_cols=378 Identities=21% Similarity=0.216 Sum_probs=325.4
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhh-------hhhHHHHHHHHHHH
Q 009397 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV----DAS-------LGEIMTTCEKITWL 158 (535)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~----ea~-------~~Ei~~~~~~l~~~ 158 (535)
..+++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+||+.. ++. +.|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999777766643 332 25899999999998
Q ss_pred HHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
+...+.. .. ..+......+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++
T Consensus 82 a~~~~~~-g~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPDPV-GE-VLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCCCC-cc-cccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 8765422 11 11110000122457889999999999996 56 678899999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCc--cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHH
Q 009397 239 QAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 314 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~ 314 (535)
+++|.++|+|+|++|+|++.+ +.++.|++ ++|+|+||||+.+|+.|++.+ ++|+++|||||||+||++|||++
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence 999999999999999999853 35677776 699999999999999999877 69999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC
Q 009397 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG 394 (535)
Q Consensus 315 ~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~G 394 (535)
.|++.+++|+|.|+| .|++++|||||+++||+|+++|++++++ .|
T Consensus 235 ~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~g 279 (406)
T cd07079 235 MAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AG 279 (406)
T ss_pred HHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CC
Confidence 999999999999999 9999999999999999999999998765 25
Q ss_pred CcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHH
Q 009397 395 AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474 (535)
Q Consensus 395 a~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~ 474 (535)
++++.|+.. ..|++|| +++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 280 a~~~~g~~~--------~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~ 347 (406)
T cd07079 280 VELRGDEET--------LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAE 347 (406)
T ss_pred CEEecCHHH--------HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHH
Confidence 675533321 1377888 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcceEEECCCCccccCCCC----CCCC----CCcCcHHHhhccCceeeee
Q 009397 475 EIAAQIQCGVAAINDFASNYMCQVF----KCIF----DEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 475 ~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~----G~~~g~~gl~~~~~~~k~~ 522 (535)
++++++++|+|+||++.......|+ .||+ ||++|.+|+ ++|++.|.+
T Consensus 348 ~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l-~~~~~~k~i 402 (406)
T cd07079 348 RFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGL-EELTTYKYI 402 (406)
T ss_pred HHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcCh-HHhcEEEEE
Confidence 9999999999999997654444455 6877 999999999 589999986
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-71 Score=583.00 Aligned_cols=383 Identities=19% Similarity=0.199 Sum_probs=329.4
Q ss_pred HHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hhHHHHHHH
Q 009397 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCEK 154 (535)
Q Consensus 86 ~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~~-------~Ei~~~~~~ 154 (535)
+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999998887764 24422 588889999
Q ss_pred HHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHH
Q 009397 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 234 (535)
Q Consensus 155 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~ 234 (535)
+++++.+.+.. +.. .+......+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++.++
T Consensus 84 ~~~~a~~~~~~-g~~-~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 84 LRQVAALPDPV-GEV-LDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHhhcCCCc-ccc-ccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 99888765532 211 11100001224678999999999999986 4 67888999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCC-cc-chhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecC
Q 009397 235 FRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310 (535)
Q Consensus 235 ~~~i~~~l~~aG~p~~~v~~v~~~-~~-~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~d 310 (535)
++++.++|.++|+|+|++|+|++. .+ .++.|.. .+++|+||||+.+|+.+++.+ +||+++|||||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 999999999999999999999964 34 5677775 899999999999999999865 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009397 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390 (535)
Q Consensus 311 aDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a 390 (535)
||++.|++.+++|+|+|+| .|++++|+|||+++||+|+++|++++++++.+
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999887532
Q ss_pred HHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCH
Q 009397 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470 (535)
Q Consensus 391 ~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~ 470 (535)
++ ||.. ..+ | .|||+ +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 288 ------~~-~~~~------~~~-~-~PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~ 349 (417)
T PRK00197 288 ------LR-GDEA------ALA-L-LPDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDY 349 (417)
T ss_pred ------Ee-cCHH------HHH-h-hcccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCH
Confidence 11 1110 012 2 29998 57899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC----CcCcHHHhhccCceeeeec
Q 009397 471 HRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD----EFDSVHVILNDPTKLKMLP 523 (535)
Q Consensus 471 ~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G----~~~g~~gl~~~~~~~k~~~ 523 (535)
++++++++++++|+|+||+...+....++ .||+| |++|.+|| ++|++.|++.
T Consensus 350 ~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l-~~~~~~k~v~ 409 (417)
T PRK00197 350 AAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGL-EELTTYKYIV 409 (417)
T ss_pred HHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccch-HhhcEEEEEE
Confidence 99999999999999999997554443344 89999 99999999 5799999873
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-70 Score=619.72 Aligned_cols=427 Identities=17% Similarity=0.186 Sum_probs=364.5
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHH
Q 009397 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 158 (535)
Q Consensus 79 ~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~ 158 (535)
.+...+.+|++++|++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..+++..++..+.+.++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 35668999999999999999999999999999999999999999999999999999999999888533444444444433
Q ss_pred HHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
+. .++.... ... ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 85 ~~-~~~~~g~--~~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~ 158 (862)
T PRK13805 85 YK-DEKTVGV--IEE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIV 158 (862)
T ss_pred hc-CCCcccc--cCc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHH
Confidence 32 1111111 000 11344678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHH
Q 009397 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~ 315 (535)
+++|.++|+|+|+||+|++. .+.++.|++ ++|+|+||||+.++ +.++++++|+++|+|||||+||++|||++.
T Consensus 159 ~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 99999999999999999984 467888888 69999999999964 556778999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009397 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (535)
Q Consensus 316 aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga 395 (535)
|++.+++|+|+|+||.|++++|||||+++||+|+++|+++ | +++++++++++++++|+++++.|+
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~ 299 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGAL 299 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCc
Confidence 9999999999999999999999999999999999999886 2 579999999999999999877666
Q ss_pred cE-eccCCCCCCCCCCCCceeccEE------EEcCCCCCcccccccccceeeeeecCCHHHHHHHhhc----CCCCcEEE
Q 009397 396 EI-LARGSFGHLSEGAVDQYFPPTV------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCA 464 (535)
Q Consensus 396 ~~-l~gG~~~~~~~~~~g~~~~Ptv------l~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gL~as 464 (535)
+. +.||..... ....|.+++||+ +.+++++|++++ |.||||++|++|+|+||||+++|+ ++|||+++
T Consensus 300 ~~~~~g~~~~~~-~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~ 377 (862)
T PRK13805 300 NADIVGQSAYKI-AEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAV 377 (862)
T ss_pred CccccCCCHHHH-HHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEE
Confidence 43 456642110 012478889987 678999999887 789999999999999999999998 48999999
Q ss_pred EecCCHHHHHHHHhhcCcceEEECCCCc----------cccCCCC---CCCCCCcCcHHHhhccCceeeeecCCCCCCCc
Q 009397 465 VFSGSQHRAREIAAQIQCGVAAINDFAS----------NYMCQVF---KCIFDEFDSVHVILNDPTKLKMLPHFSVPAIW 531 (535)
Q Consensus 465 vfs~d~~~~~~~a~~l~~G~v~IN~~~~----------~~~~~~~---~SG~G~~~g~~gl~~~~~~~k~~~~~~~~~~~ 531 (535)
|||+|.++++++++++++|+|+||.... +....+| .||.|+++|..|+ +.|++.|++-.-+.++-|
T Consensus 378 i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~~g~~~~~g~~g~-~~~~~~k~v~~~~~~~~~ 456 (862)
T PRK13805 378 IYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGCGSWGGNSVSENVGA-KHLLNIKTVAKRRENMQW 456 (862)
T ss_pred EECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccccCCCCCcCCCCCCH-HHhheeeeeeecccccee
Confidence 9999999999999999999999998742 1112223 8999999999999 589999999766667777
Q ss_pred cc
Q 009397 532 WC 533 (535)
Q Consensus 532 ~~ 533 (535)
|+
T Consensus 457 ~~ 458 (862)
T PRK13805 457 FK 458 (862)
T ss_pred ee
Confidence 65
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-69 Score=536.84 Aligned_cols=445 Identities=24% Similarity=0.396 Sum_probs=395.9
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHH--HhhcCHHHHHHHHHHHHHHHHHh
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
.+-++||+|+|+++.++.++..+||+||.+|++++.++..|+|+|+.+|+.||+. |.++|..+|.+.|.++++++++|
T Consensus 420 ~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h 499 (881)
T KOG2452|consen 420 MPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQH 499 (881)
T ss_pred CcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhc
Confidence 3557899999999999999999999999999999999999999999999999975 99999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccc-cccceeeeecceEEEEEcCCchhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-HKKAKVEFHPLGVVGAIVSWNYPFH 203 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~PlGVv~~i~p~n~P~~ 203 (535)
+++++.+.++|.|.-..-|.-.-+--+++..||++..+++.-.. ..|-+...+ ..-+.++++|+|||++|.|||||+.
T Consensus 500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~-tipi~~arpn~nl~lt~~epigv~g~i~pwnyplm 578 (881)
T KOG2452|consen 500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGS-TIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLM 578 (881)
T ss_pred cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCc-eeccccCCCCCcceeeecCcceeEEEeccCCchHH
Confidence 99999999999997665553345556788899999988876432 222221111 2335678899999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcc-chhhhhc--cccEEEEeCChHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGV 280 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~GS~~~ 280 (535)
.+.|+.+++|++- ..+++ --.|++|+++|.++ .++.|.. +++.|-||||+++
T Consensus 579 mlswk~aaclaa~-----------------~~k~~--------e~sgvini~~gsgslvg~rls~hpdvrkigftgstei 633 (881)
T KOG2452|consen 579 MLSWKTAACLAAQ-----------------VLKFA--------ELTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEV 633 (881)
T ss_pred HHHHHHHHHHHHH-----------------Hhhhh--------hhcceEEEecCCcchhccccccCCccceeccccchHH
Confidence 9999999988741 11221 13688999999875 5788888 9999999999999
Q ss_pred HHHHHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 281 GRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 281 g~~v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
|+.|++.|++ +.|+|.+||||++|+||+.|||+++|++..+-+.|++-|.+|++..|+||..+++|+|+.++.+.++++
T Consensus 634 g~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~ 713 (881)
T KOG2452|consen 634 GKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKM 713 (881)
T ss_pred HHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhh
Confidence 9999999885 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
++|+|+|++++-||--.-++..++-++++.+++.||++.+||++.. ..|.||+||++.++.++|.++.||-||||+
T Consensus 714 ~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~----r~g~~f~pti~s~i~d~~f~a~eesfgpim 789 (881)
T KOG2452|consen 714 KVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVP----RPGFFFEPTVFTDVEDHMFIAKEESFGPVM 789 (881)
T ss_pred ccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCC----CCCcccCCeeecccchhhhhhhccccCceE
Confidence 9999999999999988888899999999999999999999999764 579999999999999999999999999999
Q ss_pred eeeecC--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhh
Q 009397 440 PIMKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 440 ~v~~~~--~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~ 513 (535)
.|.+|+ |+|+.++.+|+++|||+++|||+|...+.++++.|++|+|+||.+.-.....|| .||+|.--|++.|
T Consensus 790 ~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~al- 868 (881)
T KOG2452|consen 790 IISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAAL- 868 (881)
T ss_pred EEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHH-
Confidence 999996 488999999999999999999999999999999999999999987655554455 9999999999999
Q ss_pred ccCceeeee
Q 009397 514 NDPTKLKML 522 (535)
Q Consensus 514 ~~~~~~k~~ 522 (535)
++|...|.+
T Consensus 869 neyl~~kti 877 (881)
T KOG2452|consen 869 NEYLRVKTV 877 (881)
T ss_pred hhheeeEEE
Confidence 678888876
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-67 Score=586.54 Aligned_cols=374 Identities=17% Similarity=0.189 Sum_probs=324.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcC--CChhhhh---hhhHHHHHHHH
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEIS------SRDTG--KTMVDAS---LGEIMTTCEKI 155 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~------~~etG--k~~~ea~---~~Ei~~~~~~l 155 (535)
++++++++|++||..|+++|..+|.++|+++++.|+++.++|++++ ++|+| |++.++. .+|+..+++.+
T Consensus 295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~ 374 (718)
T PLN02418 295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI 374 (718)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999996 77999 8887764 46999999999
Q ss_pred HHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHH
Q 009397 156 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235 (535)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~ 235 (535)
+|+++.. +........... ..+...++.++|+|||++|+||| |+... +++++||++||+||+|||+.+|+++.+++
T Consensus 375 ~~~a~~~-~~~g~~~~~~~~-~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 375 RQLADME-DPIGRVLKRTEV-ADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHhcCc-cccCcccccccc-CCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 9999873 332211110000 01223578899999999999999 99998 89999999999999999999999999888
Q ss_pred HHHHHHHHhcCCCCC----cEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 236 RIIQAALAAVGAPEN----LVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 236 ~~i~~~l~~aG~p~~----~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
+++.+ + +|+| ++|+|++.++.++.|+. .+++|+||||+. .+++.+++++||+++|||||||+||++
T Consensus 451 ~l~~e----A-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 451 KVITD----A-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHH----H-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeC
Confidence 87655 5 7777 49999985567888887 999999999996 455556677899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~ 389 (535)
|||++.|++.+++|+|.| ||.|++.+|+|||+++||+ | .++++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999996 2 35899999
Q ss_pred HHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCC
Q 009397 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (535)
Q Consensus 390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d 469 (535)
|+++||++ +||.+. .| ++ .+ ++|++++||.||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 569 a~~~Ga~l-~Gg~~~------~g------~l-~~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d 633 (718)
T PLN02418 569 LRSAGVTL-YGGPRA------SK------LL-NI-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTED 633 (718)
T ss_pred HHHCCCEE-ECCccc------cC------ee-CC-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCC
Confidence 99999999 688632 13 23 24 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcceEEECCCCccccCCCC----CCCC--CCcC--cHHHhhccCceeeee
Q 009397 470 QHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIF--DEFD--SVHVILNDPTKLKML 522 (535)
Q Consensus 470 ~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~--G~~~--g~~gl~~~~~~~k~~ 522 (535)
.+++.++++++++|+|+||++..+....|| .||+ ||++ |++|| ++|++.|++
T Consensus 634 ~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl-~~~t~~K~v 693 (718)
T PLN02418 634 SEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGV-EGLLTTRWI 693 (718)
T ss_pred HHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHH-HHHhcEEEE
Confidence 999999999999999999997655444456 9999 9885 99999 689999998
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-66 Score=527.61 Aligned_cols=426 Identities=21% Similarity=0.362 Sum_probs=381.3
Q ss_pred CCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 009397 62 SETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (535)
Q Consensus 62 ~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~ 140 (535)
.++..++.||++ ..++|+|..++.+|+++|++.|.+|+..|..+|..+|+.+|++++++++.+..+|..++.+|.||++
T Consensus 125 ~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl 204 (769)
T COG4230 125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTL 204 (769)
T ss_pred CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 467899999998 5588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEE
Q 009397 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (535)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV 220 (535)
.++ ..||..++++++||+...+.-+. ...++|+|.|.||+|||||+..+.+++++||++||+|+
T Consensus 205 ~na-IAEVREAVDFlrYYA~~ar~~~g---------------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~Vl 268 (769)
T COG4230 205 SNA-IAEVREAVDFLRYYAGQARDTFG---------------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVL 268 (769)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHhcccC---------------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccc
Confidence 999 79999999999999988765221 13457999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcc-chhhhhc--cccEEEEeCChHHHHHHHHHHhc---cCCc
Q 009397 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASK---TLTP 294 (535)
Q Consensus 221 ~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~---~~~p 294 (535)
-||.|++|+.+..-+++ |.++|+|++++|+++|+++ .+..|++ +++.|+||||+++++.|.+..++ ...|
T Consensus 269 AKPAEqTpLIAa~aV~l----l~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~p 344 (769)
T COG4230 269 AKPAEQTPLIAAQAVRL----LHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIP 344 (769)
T ss_pred cCccccccHHHHHHHHH----HHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCc
Confidence 99999999999877776 5669999999999999985 8999999 99999999999999999998886 3578
Q ss_pred eeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCccccc
Q 009397 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 374 (535)
Q Consensus 295 v~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpl 374 (535)
++.|.||-|.+||+.+|=-+.++..++.|+|.++||+|++...+++++++.|..++.|+-.+.++++|+|..-.+|+||+
T Consensus 345 LIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPV 424 (769)
T COG4230 345 LIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPV 424 (769)
T ss_pred eEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC--CHHHHHH
Q 009397 375 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVK 452 (535)
Q Consensus 375 i~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~--~~~eai~ 452 (535)
|+.+..+.++++|+....+|-++ +.-.... ...+|+|+.||++. +.. ..-++.|+|||||.|++|+ ++++.|+
T Consensus 425 IdaEAk~~i~~Hi~~mr~~gr~v-~q~~~~~--~~q~GtFv~Ptl~E-l~~-~~eL~rEVFGPVLHVvRy~~~~l~~vi~ 499 (769)
T COG4230 425 IDAEAKANIEKHIQTMRSKGRLV-HQAAAPN--SLQKGTFVAPTLIE-LEN-LDELQREVFGPVLHVVRYKRDELDEVID 499 (769)
T ss_pred ccHHHHHHHHHHHHHHHhcccch-hhccCCC--ccCCceeeCceeEE-cCC-HHHHHHHhccceeEEEEecHHHHHHHHH
Confidence 99999999999999988887444 2222111 11579999999985 332 2335899999999999995 6899999
Q ss_pred HhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCC--ccccCCCC----CCCCCCcCc-HHHh
Q 009397 453 LANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA--SNYMCQVF----KCIFDEFDS-VHVI 512 (535)
Q Consensus 453 ~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~--~~~~~~~~----~SG~G~~~g-~~gl 512 (535)
-+|.++|||+.+|||+-.+.+.++.+++++|+++||.-. .-...||| -||.|...| +.=|
T Consensus 500 ~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL 566 (769)
T COG4230 500 QINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYL 566 (769)
T ss_pred HHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999853 34457888 799996654 4444
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-66 Score=540.68 Aligned_cols=374 Identities=17% Similarity=0.153 Sum_probs=314.1
Q ss_pred HHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHhcCCCh--h----hhhhhhHHHHHHHHHHHHHhc
Q 009397 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI------SSRDTGKTM--V----DASLGEIMTTCEKITWLLSEG 162 (535)
Q Consensus 95 A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~------~~~etGk~~--~----ea~~~Ei~~~~~~l~~~~~~~ 162 (535)
|++||+.|+++|..+|.++|+++++.|++|+++|+++ +++|+||+. . ++ .+|+..+++.++|+++.+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a-~~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLT-EGRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCC-HHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999999999 999999993 2 33 479999999999999887
Q ss_pred hhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 009397 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (535)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l 242 (535)
+.. .. ..+......+...+++++|+|||++|.||| | ...++++++||++||+||+|||+.+|+++..++++++++|
T Consensus 80 ~~~-g~-~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-GK-VIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-cc-cccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 653 21 111100012335678999999999999997 6 6688899999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCC-c-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHH
Q 009397 243 AAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318 (535)
Q Consensus 243 ~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~ 318 (535)
.++|+|+|++|+|++. . +.++.|.. ++++|+||||+.+++.+++. ..+|+++|+|||||+||++|||++.|++
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 9999999999999974 3 36777876 89999999999999998875 3589999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEe
Q 009397 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398 (535)
Q Consensus 319 ~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l 398 (535)
.+++|+|.+ ||.|++++|+|||+++||+|+++|.++++++++ .+++ .+.+++++.
T Consensus 233 ~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~---------- 287 (398)
T TIGR00407 233 VIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLE---------- 287 (398)
T ss_pred HHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHh----------
Confidence 999999964 999999999999999999999999999998643 1221 133333332
Q ss_pred ccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHh
Q 009397 399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478 (535)
Q Consensus 399 ~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~ 478 (535)
+|. ||++ ++ +|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++
T Consensus 288 -~g~--------------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~ 349 (398)
T TIGR00407 288 -LGP--------------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQN 349 (398)
T ss_pred -ccC--------------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHH
Confidence 121 3543 33 37899999999999999999999999999999999999999999999999999
Q ss_pred hcCcceEEECCCCccccCCCC--------CCCCCCcCcHHHhhccCceee
Q 009397 479 QIQCGVAAINDFASNYMCQVF--------KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 479 ~l~~G~v~IN~~~~~~~~~~~--------~SG~G~~~g~~gl~~~~~~~k 520 (535)
++++|+|+||++..+....|+ .++...-.|+-|+ +.+|+.|
T Consensus 350 ~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~-~~~~~~~ 398 (398)
T TIGR00407 350 GVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGL-EALTSYK 398 (398)
T ss_pred hCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCH-HHhcCCC
Confidence 999999999998654443334 4556677788888 5666654
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-65 Score=536.29 Aligned_cols=369 Identities=14% Similarity=0.121 Sum_probs=322.9
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh----------hhhHHHHHHHHHHHHHhc
Q 009397 93 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS----------LGEIMTTCEKITWLLSEG 162 (535)
Q Consensus 93 ~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~----------~~Ei~~~~~~l~~~~~~~ 162 (535)
++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||++.+.. ..|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 138888999999888765
Q ss_pred hhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 009397 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (535)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l 242 (535)
.+..... .+. ....+++++|+|||++|.|||||+. .++++++||++||+||+|||+.+|+++.++.+++++++
T Consensus 81 ~~~~~~~-~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDVL-LPD-----NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred CcccceE-ecC-----CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 5433221 111 1356789999999999999999999 99999999999999999999999999999999888764
Q ss_pred HhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHH
Q 009397 243 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319 (535)
Q Consensus 243 ~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~ 319 (535)
++|+|+++++++++.. +.++.|+. ++|+|+||||+++++.+.+.+. .+|++.|+||++|+||++|+|++.|++.
T Consensus 154 -~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~ 230 (397)
T cd07077 154 -AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGS 230 (397)
T ss_pred -hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHH
Confidence 4689999999998754 67788887 7999999999999999988774 6999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEec
Q 009397 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399 (535)
Q Consensus 320 i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~ 399 (535)
+++++|+| ||.|++++|||||+++||+|+++|+++++. +|++++.
T Consensus 231 ~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~ 275 (397)
T cd07077 231 VHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQ 275 (397)
T ss_pred HHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCC
Confidence 99999999 999999999999999999999999998754 5778877
Q ss_pred cCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHH----HHHHHhhcCCCCcEEEEecCCHHHHHH
Q 009397 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE----EVVKLANDSRYGLGCAVFSGSQHRARE 475 (535)
Q Consensus 400 gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gL~asvfs~d~~~~~~ 475 (535)
||+ +.|+.|| ++|+++++|.||||++|++|+|++ +|++++|+++|||+++|||+|.+++++
T Consensus 276 g~~---------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~ 340 (397)
T cd07077 276 ETK---------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDD 340 (397)
T ss_pred Cce---------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 764 3577776 789999999999999999999996 666788999999999999999999999
Q ss_pred HHhhcCcceEEECCCCccc--cCCCC------CCCCCCcCc-HHHhhccCceeeee
Q 009397 476 IAAQIQCGVAAINDFASNY--MCQVF------KCIFDEFDS-VHVILNDPTKLKML 522 (535)
Q Consensus 476 ~a~~l~~G~v~IN~~~~~~--~~~~~------~SG~G~~~g-~~gl~~~~~~~k~~ 522 (535)
+++++++|+|+||+..... ...++ .||+|+++| .+|+ ++|++.|++
T Consensus 341 ~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~-~~~~~~k~v 395 (397)
T cd07077 341 FVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGH-DALRPLKRL 395 (397)
T ss_pred HHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCCh-HHhcceeEe
Confidence 9999999999999976543 21223 599999999 9999 579999876
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-62 Score=511.11 Aligned_cols=356 Identities=35% Similarity=0.549 Sum_probs=326.2
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCC
Q 009397 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173 (535)
Q Consensus 94 ~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~ 173 (535)
+|++|+..|+++|..+|.++|+++++.|.++.++|++++++|+||++.++ ..|+..+++.++++++..++.........
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEA-LGEVARAIDTFRYAAGLADKLGGPELPSP 80 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 68899999999999999999999999999999999999999999999888 58999999999999988776654221111
Q ss_pred CcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 009397 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253 (535)
Q Consensus 174 ~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~ 253 (535)
..+...+++++|+|||++|.|||+|+.+.++++++||++||+||+|||+.+|.++..+.++ |.++|+|+++++
T Consensus 81 ---~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~----l~~ag~p~~~v~ 153 (367)
T cd06534 81 ---DPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAEL----LQEAGLPPGVVN 153 (367)
T ss_pred ---CCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH----HHhcCCCcCeEE
Confidence 1345678899999999999999999999999999999999999999999999999877665 566899999999
Q ss_pred EEeCCcc-chhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCC
Q 009397 254 VITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 330 (535)
Q Consensus 254 ~v~~~~~-~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ 330 (535)
+++++.+ .++.|+. ++|.|.|+||.++++.|.+.++++++|+++|+||+|++||++|+|++.+++.+++++|.++||
T Consensus 154 ~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq 233 (367)
T cd06534 154 VVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQ 233 (367)
T ss_pred EEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999764 6777877 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCC
Q 009397 331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 410 (535)
Q Consensus 331 ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~ 410 (535)
.|+++++||||++++|+|+++|+
T Consensus 234 ~C~s~~~v~v~~~~~~~f~~~l~--------------------------------------------------------- 256 (367)
T cd06534 234 ICTAASRLLVHESIYDEFVEKLV--------------------------------------------------------- 256 (367)
T ss_pred CCCCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------
Confidence 99999999999999999999887
Q ss_pred CCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCC
Q 009397 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490 (535)
Q Consensus 411 ~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~ 490 (535)
||+.+++++++++++|+||||++|++|+|.+||++++|++++||+++|||+|...+++++.++++|+|+||+.
T Consensus 257 -------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 329 (367)
T cd06534 257 -------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDS 329 (367)
T ss_pred -------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 7777888999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Ccc-ccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 491 ASN-YMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 491 ~~~-~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
... ....|+ .||+|+++|++|+ ..|++.|++
T Consensus 330 ~~~~~~~~pfgg~~~sG~g~~~g~~~~-~~~~~~k~i 365 (367)
T cd06534 330 SIGVGPEAPFGGVKNSGIGREGGPYGL-EEYTRTKTV 365 (367)
T ss_pred CCCCCCCCCCCCcccCccCCCChHHHH-HHhceEEEE
Confidence 766 444455 9999999999999 589999886
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-62 Score=547.70 Aligned_cols=376 Identities=16% Similarity=0.147 Sum_probs=308.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh---------------hHHHH
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG---------------EIMTT 151 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~---------------Ei~~~ 151 (535)
+++..+++|++||.+|+.+|.++|.++|+++++.|++|+++|+ .++||++.+++.. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999997 4788888766421 36667
Q ss_pred HHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHH
Q 009397 152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231 (535)
Q Consensus 152 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~ 231 (535)
++.++++++. .+... +..+..........+.+++|+|||++|+||| |+.. .+++++||++||+||+|||+.+|+++
T Consensus 363 ~~~l~~~a~~-~~~~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~ 438 (715)
T TIGR01092 363 AISLRQLAAM-EDPIG-RVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSN 438 (715)
T ss_pred HHHHHHHhcC-CCccc-ccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHH
Confidence 7777777652 22111 0000000001122467899999999999999 9998 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 232 ~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
.++.+++.++| ..|.+++++++|++..+.++.|.. .+|+|+||||+.+|+.|++.++ ||+++|+|||||+||++
T Consensus 439 ~~l~~l~~~al-p~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~ 514 (715)
T TIGR01092 439 AILHKVITEAI-PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK 514 (715)
T ss_pred HHHHHHHHHHc-CCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC
Confidence 99999887652 333344589999864456677776 8999999999999999998874 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~ 389 (535)
|||++.|++.+..+.|.+ ||.|++++|||||+++||+ | .+++++++
T Consensus 515 dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~ 560 (715)
T TIGR01092 515 SASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDM 560 (715)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHH
Confidence 999999998887777665 9999999999999999984 0 26678888
Q ss_pred HHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCC
Q 009397 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (535)
Q Consensus 390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d 469 (535)
+.++|++++ ||.+. .+ |+. ..+++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 561 ~~~~Ga~l~-Gg~~~------~~-~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d 627 (715)
T TIGR01092 561 LRTEGVTIH-GGPRF------AA-YLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTED 627 (715)
T ss_pred HHHCCCEEE-CCcch------hh-eec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCC
Confidence 888999985 87631 12 332 136799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCC----cCcHHHhhccCceeeee
Q 009397 470 QHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDE----FDSVHVILNDPTKLKML 522 (535)
Q Consensus 470 ~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~----~~g~~gl~~~~~~~k~~ 522 (535)
.+.++++++++++|+|+||+...+....|+ .||+|+ ++|.+|+ ++|++.|++
T Consensus 628 ~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l-~~~~~~k~v 687 (715)
T TIGR01092 628 ENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGV-EGLLTTRWL 687 (715)
T ss_pred HHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHH-HHhceEEEE
Confidence 999999999999999999987544333355 899995 4899999 589999987
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-63 Score=475.97 Aligned_cols=453 Identities=22% Similarity=0.341 Sum_probs=412.7
Q ss_pred CcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 009397 55 PRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134 (535)
Q Consensus 55 ~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~ 134 (535)
|+|.. ++..++.|+|+++++|+.|..++.+|.+.+++.|++|.+-|...|...|.++.|++.+.|+...+.|.+++++
T Consensus 26 gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvsl 103 (507)
T KOG2453|consen 26 GKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSL 103 (507)
T ss_pred eeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhh
Confidence 37854 5789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhhhhhhhHHHHHHHHHHHHHhchhhcC---CcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHH
Q 009397 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (535)
Q Consensus 135 etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~ 211 (535)
|+||-+.|. .||+..-++..+|.....+..-. |..||+.. ..-.+.|+|+|++|+.+|||-...-|+-..
T Consensus 104 emgkilaeg-vgevqeyvdicdyavglsr~l~g~i~pserpgha------lleqwnplg~vgvitafnfpcavygwnnai 176 (507)
T KOG2453|consen 104 EMGKILAEG-VGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHA------LLEQWNPLGVVGVITAFNFPCAVYGWNNAI 176 (507)
T ss_pred hhhhHhhhc-chhHHHHHHHHHHhhhhhhhhCCcccCCCCCchh------HHHhcCCcceEEEEEeccCCceeeccCchh
Confidence 999999998 69999999998887665444322 34444432 223567999999999999999988888888
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHh
Q 009397 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289 (535)
Q Consensus 212 AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa 289 (535)
|+.+||+|++||.+.+|+++....+++.+.|.+--+|++.....+|+.+.++++.. ++..+.||||+++++.+.+...
T Consensus 177 aMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq 256 (507)
T KOG2453|consen 177 AMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ 256 (507)
T ss_pred hhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 9999999999999999998888
Q ss_pred ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCC
Q 009397 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369 (535)
Q Consensus 290 ~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 369 (535)
.+..+..+||||+|+.||.+|||+..++...++.+...+||+|+..+|+++|+++||+.+++|++..+++++|+|+|+++
T Consensus 257 arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~nt 336 (507)
T KOG2453|consen 257 ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNT 336 (507)
T ss_pred HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCc
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHH
Q 009397 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 449 (535)
Q Consensus 370 ~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~e 449 (535)
-+||+.++++..+++.-+++++++|.++++||+..+ ..|+|++||++. ...|.+++.+|.|+||++|.+|++++|
T Consensus 337 l~gplht~qav~~f~~~veeak~~ggki~yggkv~e----r~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~ee 411 (507)
T KOG2453|consen 337 LIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLE----RDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEE 411 (507)
T ss_pred eeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeec----cCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhh
Confidence 999999999999999999999999999999999653 679999999997 899999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHh--hcCcceEEECCCCccccCCC-C----CCCCCCcCcHHHhhccCceeee
Q 009397 450 VVKLANDSRYGLGCAVFSGSQHRAREIAA--QIQCGVAAINDFASNYMCQV-F----KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 450 ai~~~n~~~~gL~asvfs~d~~~~~~~a~--~l~~G~v~IN~~~~~~~~~~-~----~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
|+++-|+.+.||++|+||+|...+-++.- ..+||.|.||=+....-... | ..|-||+.|.+.-..+|.+-..
T Consensus 412 a~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstc 490 (507)
T KOG2453|consen 412 AIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTC 490 (507)
T ss_pred hheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhcee
Confidence 99999999999999999999999999885 56899999998754332221 2 8899999999998776665444
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-61 Score=476.09 Aligned_cols=460 Identities=20% Similarity=0.275 Sum_probs=389.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHH-HhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~-~~~~ 126 (535)
.-+-|+|+-+.. .......||.+ ...++++..++.++|+.||++|.+|++.|...|+.+|.+|+++.++++. +++-
T Consensus 60 vP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~ 137 (561)
T KOG2455|consen 60 VPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRY 137 (561)
T ss_pred ccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHH
Confidence 345566643322 22355568887 6689999999999999999999999999999999999999999999998 7888
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecc-eEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~n~P~~~~ 205 (535)
+|-...+.-.||+..+|...-+...++.+|+.+..+.+...-+... + .....+..+++|+ |.|++|+||||-....
T Consensus 138 ~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~-~--~~~t~ns~~yRpleGFVaAisPFnftAI~g 214 (561)
T KOG2455|consen 138 DLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPIS-Q--TKGTWNSMEYRPLEGFVAAISPFNFTAIGG 214 (561)
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCcc-c--cCCCCcceeeccccceeEEecccceeeecc
Confidence 8888899999999999966667778888888887777654322221 1 2345677899999 9999999999977655
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
-...+||| +||+|++|||..+.+++.++.++ |+|+|+|+|++|+|++++ ..++.++. +...+.||||..+-+
T Consensus 215 nLa~aPaL-MGN~VLwkPS~ta~lssYii~~i----l~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk 289 (561)
T KOG2455|consen 215 NLAGAPAL-MGNVVLWKPSDTAALSSYIIYRI----LREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFK 289 (561)
T ss_pred ccccChhh-hcceeeecccchhHHHHHHHHHH----HHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHH
Confidence 55556665 59999999999999999876666 566999999999999987 67887777 999999999999999
Q ss_pred HHHHHHhccC------CceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH
Q 009397 283 MIMRNASKTL------TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (535)
Q Consensus 283 ~v~~~aa~~~------~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~ 356 (535)
.+.+..++++ .+++.|+||||.-+|+++||++.++...+|++|.++||.|.+.+|+||+++.++.+.+.|.+.-
T Consensus 290 ~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~ 369 (561)
T KOG2455|consen 290 HLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEH 369 (561)
T ss_pred HHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHH
Confidence 9998887654 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHc-CCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccc
Q 009397 357 KSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434 (535)
Q Consensus 357 ~~l~~G~~-~~~~~~~Gpli~~~~~~~l~~~i~~a~~~-Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~ 434 (535)
.++++|+| .|..+++||+|..+.|+|++++|+.|++. -.++|+||+- +...|+|++|||+..-+|..+++.||+
T Consensus 370 ~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~ee~ 445 (561)
T KOG2455|consen 370 SQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMTEEI 445 (561)
T ss_pred hhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhhhhc
Confidence 99999998 68899999999999999999999999864 4678999983 246799999999999999999999999
Q ss_pred ccceeeeeecCC--HHHHHHHhhc-CCCCcEEEEecCCHHHHHHHHhhcC--cceEEECCCC--ccccCCCC----CCCC
Q 009397 435 FGPIMPIMKFNT--DEEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFA--SNYMCQVF----KCIF 503 (535)
Q Consensus 435 fgPvl~v~~~~~--~~eai~~~n~-~~~gL~asvfs~d~~~~~~~a~~l~--~G~v~IN~~~--~~~~~~~~----~SG~ 503 (535)
|||||+|+.|+| .+|+++++.+ ++|||+.+||+.|.+.+.+.-++|+ +|+.+|||.. ..+..||| .||.
T Consensus 446 fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGT 525 (561)
T KOG2455|consen 446 FGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGT 525 (561)
T ss_pred cCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCC
Confidence 999999999975 7899998855 7999999999999999999998775 9999999974 45667778 7888
Q ss_pred CCcCcHHHhhccCceeeee
Q 009397 504 DEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 504 G~~~g~~gl~~~~~~~k~~ 522 (535)
....|..-++-.++....+
T Consensus 526 NDKaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 526 NDKAGGPHYLLRWTSPLSI 544 (561)
T ss_pred CCCCCCceEEEeecCcchh
Confidence 7655544443344444333
|
|
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=279.39 Aligned_cols=380 Identities=20% Similarity=0.220 Sum_probs=298.0
Q ss_pred HHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC----ChhhhhhhhHHHHHHHHHHHHHh
Q 009397 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK----TMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 86 ~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk----~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
.++.+..++|++|....+.++..+|.+.|..+++.|+++.++|.++...|.-. .+.++.+.-...+-++++..++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999998877766321 12222222222333344433333
Q ss_pred chhh----------cCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHH
Q 009397 162 GEKW----------LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231 (535)
Q Consensus 162 ~~~~----------l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~ 231 (535)
.++. +....++. +-..+..+.|+||+++| +..-...++....-+|.+||+||+|.+..+..|+
T Consensus 83 l~~Va~L~DPvGev~~~~~~~n-----GL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn 155 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPN-----GLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSN 155 (417)
T ss_pred HHHHhcCCCchHhhhccccCCC-----CCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhH
Confidence 2222 12222222 34556788999999999 7777778888889999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc---cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEE
Q 009397 232 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307 (535)
Q Consensus 232 ~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~---~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV 307 (535)
..+++++++.|.++|+|++.||+++... +....|+. .+|.|+..||...-+.|.+.+. .||+-.+-|++.++|
T Consensus 156 ~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyv 232 (417)
T COG0014 156 AAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYV 232 (417)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEe
Confidence 9999999999999999999999998743 44455544 8999999999999999888776 899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009397 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387 (535)
Q Consensus 308 ~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i 387 (535)
+.+||+|.|.+.++.++.+..+- |.+.+.++||+.+.++|+..|.+.+... |.-+.. ++ ...+++
T Consensus 233 d~~ADld~A~~ii~nAKtqrPs~-CNA~EtLLVh~~ia~~fLp~l~~~l~~~--gvelr~--------d~----~~~~~~ 297 (417)
T COG0014 233 DESADLDKALKIIVNAKTQRPSV-CNAAETLLVHRAIAKSFLPKLANALQEA--GVELRG--------DA----EALALL 297 (417)
T ss_pred cccCCHHHHHHHHHcccCCCCcc-cchHHHHHcCHHHHHHhHHHHHHHHHhc--CeEEEc--------CH----HHHHhc
Confidence 99999999999999999999986 9999999999999999999999987642 111000 00 111111
Q ss_pred HHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEec
Q 009397 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (535)
Q Consensus 388 ~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs 467 (535)
.+ .+ .+....=+.+|...+++.|-.+++++|||+.+|....+++-+|.|
T Consensus 298 ~~---------------------~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiT 346 (417)
T COG0014 298 PD---------------------AV----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIIT 346 (417)
T ss_pred cc---------------------cC----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceee
Confidence 00 00 111112256899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCcceEEECCCCccccCCCC--------CCCCCCcCcHHHhhccCceeeee
Q 009397 468 GSQHRAREIAAQIQCGVAAINDFASNYMCQVF--------KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 468 ~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~--------~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+|...+++|.+++++..|+||-.+.|.....| ...-.+-.|+-|| +.+|..|++
T Consensus 347 e~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGL-e~LTs~Kyi 408 (417)
T COG0014 347 EDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGL-EALTSYKYI 408 (417)
T ss_pred CCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCCh-hhhcceeEE
Confidence 99999999999999999999998877665433 3444566799999 689999987
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=290.79 Aligned_cols=367 Identities=17% Similarity=0.191 Sum_probs=248.0
Q ss_pred CHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHH
Q 009397 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII----EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (535)
Q Consensus 84 ~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~----~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~ 159 (535)
+.+++++.++..+........++.++..+++.++.+.+. ..+.+..+.+..-+|.+... +..++..+....
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~-----~~~a~~~l~~~~ 77 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEM-----LREGLKRLMALF 77 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHH-----HHHHHHHHHHHc
Confidence 344555555555555555666777777777777766663 34445555555556655322 122211111111
Q ss_pred H--hchhh----cCCcccCCCccc-ccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHH
Q 009397 160 S--EGEKW----LKPEYRSSGRSM-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 232 (535)
Q Consensus 160 ~--~~~~~----l~~~~~~~~~~~-~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~ 232 (535)
. +.+.. +. ....-..++ .+...+++++|+|||++|+|||||+ ..++.++.||++||++|+|||+.+|.++.
T Consensus 78 ~r~~l~~~l~~el~-~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~ 155 (422)
T cd07080 78 RRENLERILERELG-SPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTAT 155 (422)
T ss_pred CHHHHHHHHHHhcC-CcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHH
Confidence 0 11111 11 000001111 1456688999999999999999999 79999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCC----CcEEEEe--CCc-cchhhhhccccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceE
Q 009397 233 FYFRIIQAALAAVGAPE----NLVDVIT--GFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (535)
Q Consensus 233 ~~~~~i~~~l~~aG~p~----~~v~~v~--~~~-~~~~~L~~~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~ 305 (535)
++.+++.+ + .|+ +.++++. |.. +.++.|+..-|+|+||||.++++.|++.++++ +.++|+|||++.
T Consensus 156 ~l~~~l~~----~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~ 228 (422)
T cd07080 156 ALLRSLAD----V-DPNHPLTDSISVVYWPGGDAELEERILASADAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSF 228 (422)
T ss_pred HHHHHHHh----c-CCCCcccceEEEEEecCCchHHHHHHHHhCCEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeE
Confidence 88887654 4 576 7888884 544 46788888339999999999999999998855 579999999665
Q ss_pred EEec-CC----CHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc---HHHHHHHHHHHHhcccCCCCCCCCCcccccCCH
Q 009397 306 IVCD-DV----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI---YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 377 (535)
Q Consensus 306 iV~~-da----Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v---~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~ 377 (535)
+|.+ ++ |++.+++.+++++|.++||.|+++++||||+++ +++|.++|.++++++....|.. +. +.
T Consensus 229 ~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~ 301 (422)
T cd07080 229 AVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SA 301 (422)
T ss_pred EEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CH
Confidence 5554 58 999999999999999999999999999999999 9999999999998875443321 11 33
Q ss_pred HHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcC
Q 009397 378 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457 (535)
Q Consensus 378 ~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 457 (535)
+...++...-.++...+.+... . ...+ -||+.+-.+ .+ ...+.+=.+.|+++++++|++..++.
T Consensus 302 ~~~~~~~~~r~~~~~~~~~~~~-~-------~~~~----~~v~~~~~~--~~-~~~~~~r~v~v~~v~~l~~~l~~~~~- 365 (422)
T cd07080 302 AESAKIARARLEAEFYELKGGV-S-------RDLG----WTVIISDEI--GL-EASPLNRTVNVKPVASLDDVLRPVTP- 365 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-C-------CCCC----eEEEEeCCC--Cc-cCCCCcCEEEEEEcchHHHHHHhhhh-
Confidence 3333333333222222221111 0 0111 344443222 22 12466678889999999999999986
Q ss_pred CCCcEEEEecCCHHHHHHHHhhcC-cceEEECC
Q 009397 458 RYGLGCAVFSGSQHRAREIAAQIQ-CGVAAIND 489 (535)
Q Consensus 458 ~~gL~asvfs~d~~~~~~~a~~l~-~G~v~IN~ 489 (535)
+=-|+++|+.+.+. .++++++. +|.-.|=.
T Consensus 366 -~lQTvg~~~~~~~~-~~~~~~l~~~Gv~Ri~~ 396 (422)
T cd07080 366 -YLQTVGLAPSPAEL-AELADALAAAGVDRIVA 396 (422)
T ss_pred -hcceeEeecChhhH-HHHHHHHHHcCccccCC
Confidence 66699999998877 67777664 55555433
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=213.69 Aligned_cols=378 Identities=18% Similarity=0.202 Sum_probs=277.2
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHH------HhcCCChhhhhhhhHHHHHHHHHHHHHh
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS------RDTGKTMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~------~etGk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
+++..+.|+++....+.++.++|.++|..+++.|..+..+|..+.. .++|.. +..+.....+-.++...+..
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~--~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLA--ESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCcc--HHHHHHhcCChHHHHHHHHH
Confidence 4566788999999999999999999999999999988877766443 345532 11111112222233322221
Q ss_pred chhhcCCcccCCCcc------cccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHH
Q 009397 162 GEKWLKPEYRSSGRS------MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235 (535)
Q Consensus 162 ~~~~l~~~~~~~~~~------~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~ 235 (535)
....-. ...+.++. ..+-.-+..-.|+||.++| |....-.+..-..-|+++||++++|....+..+...+.
T Consensus 80 ~~~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 80 LRQIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 111110 11111110 0122234455799999999 66666677777788999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCH
Q 009397 236 RIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313 (535)
Q Consensus 236 ~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl 313 (535)
.+++++|-+.|.|.+.||+|....+..+.|-- .||.|+..||+...+.|....- +||.-+-.|.+.++|+.|||+
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~ 233 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADL 233 (433)
T ss_pred HHHHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCH
Confidence 99999999999999999999987777665544 8999999999999999877554 999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccEEEEeccc-HHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009397 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392 (535)
Q Consensus 314 ~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v-~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~ 392 (535)
++|.+.+..+++.+..- |.+.+.+++|++. ...|. +.+..++. .
T Consensus 234 ~kA~riv~DaK~dYPAa-CNAmETLLIh~dl~~~~~~-------------------------------~~l~~~l~---~ 278 (433)
T KOG4165|consen 234 DKAKRIVRDAKCDYPAA-CNAMETLLIHKDLEQSPFF-------------------------------DDLINMLK---E 278 (433)
T ss_pred HHHHHHHhcccCCCchh-hhhHHHHhccHhhhhcchH-------------------------------HHHHHHHH---h
Confidence 99999999999988764 9999999999973 22233 33333332 2
Q ss_pred cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHH
Q 009397 393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472 (535)
Q Consensus 393 ~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~ 472 (535)
+|.++.+|-+ .. .-..+ . +++..-++.|.-.-.+++-.++|.++||+.+|..+.+++-+|.|+|...
T Consensus 279 ~gVtl~agpk-l~----~~l~~-~-------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~ 345 (433)
T KOG4165|consen 279 EGVTLHAGPK-LA----ALLKF-S-------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEAT 345 (433)
T ss_pred cCeEEecChh-HH----hhcCc-C-------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHH
Confidence 5666544433 11 01111 1 3344556788888889999999999999999999999999999999999
Q ss_pred HHHHHhhcCcceEEECCCCccccCCCC--------CCCCCCcCcHHHhhccCceeeee
Q 009397 473 AREIAAQIQCGVAAINDFASNYMCQVF--------KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 473 ~~~~a~~l~~G~v~IN~~~~~~~~~~~--------~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|...+++..|+.|....|....+| ..+.=.-.|+-|+ +-.+..||+
T Consensus 346 Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGv-eGLlttkw~ 402 (433)
T KOG4165|consen 346 AEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGV-EGLLTTKWL 402 (433)
T ss_pred HHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccc-cceeeeeeE
Confidence 999999999999999998777654433 1122233466676 456777776
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.4e-14 Score=147.31 Aligned_cols=301 Identities=18% Similarity=0.187 Sum_probs=199.8
Q ss_pred ceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe--C-C
Q 009397 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--G-F 258 (535)
Q Consensus 182 ~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~--~-~ 258 (535)
...++.|+|+++.|.|.|-|..-+ ..++.+|.+||..|+|+|+..+..+..+++.+.++..+.-+ .+.+.++. + +
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~-~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGF-YSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchHH-HHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCc
Confidence 567889999999999999999644 45778999999999999999999999888887664211111 23456663 3 2
Q ss_pred ccchhhhhccccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEE
Q 009397 259 AETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338 (535)
Q Consensus 259 ~~~~~~L~~~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv 338 (535)
.+..+.+.+..|.++.+||.++.+.+.+ ..+..++.+....-.+-.+|..+++++.+++.+..-.+...+|.|.+++.|
T Consensus 159 ~~~~~~~~~~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 159 EELEEALSQQADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred hHHHHHHHHHCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 2445556669999999999999999998 333445555555566667777778999999999999999999999999999
Q ss_pred EEe---cccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHH-----HHHHHcCCcEeccCCCCCCCCCC
Q 009397 339 YVH---RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV-----NDALDKGAEILARGSFGHLSEGA 410 (535)
Q Consensus 339 ~V~---~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i-----~~a~~~Ga~~l~gG~~~~~~~~~ 410 (535)
||. +.-.++|.++|.+.+.+..---|.. ..+......+.... ..+...+.++. ++.
T Consensus 238 fv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~-------- 301 (399)
T PF05893_consen 238 FVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVW-SSD-------- 301 (399)
T ss_pred EEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC--------
Confidence 999 3456778888877776432111110 11222222222222 23444443444 222
Q ss_pred CCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc-EEEEecCCHHHHHHHHh-hcCcceEEEC
Q 009397 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL-GCAVFSGSQHRAREIAA-QIQCGVAAIN 488 (535)
Q Consensus 411 ~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL-~asvfs~d~~~~~~~a~-~l~~G~v~IN 488 (535)
.+ .-||+..-.+ ......++=.+.|+++++.+|++..+|.... + |++++... +....++. -..+|.-.|=
T Consensus 302 ~~---~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~-lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv 373 (399)
T PF05893_consen 302 DN---SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRG-LQTVGIYPWS-ERLEELARALAAAGVDRIV 373 (399)
T ss_pred CC---CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCC-CeeEEEecCh-hhHHHHHHHHHhcCCeeeC
Confidence 11 2355543221 2234555678899999999999999998854 4 77886555 44555555 4456765554
Q ss_pred CCCccccCCCCCCCCCCcCcHHHhh
Q 009397 489 DFASNYMCQVFKCIFDEFDSVHVIL 513 (535)
Q Consensus 489 ~~~~~~~~~~~~SG~G~~~g~~gl~ 513 (535)
..+.. ..+..| +.+-|.+-|+
T Consensus 374 ~~G~m---~~~~~g-~~hDG~~~L~ 394 (399)
T PF05893_consen 374 PLGQM---LDFDPG-WPHDGMYPLR 394 (399)
T ss_pred CCCcC---CCCCCC-CCcCCHhHHH
Confidence 33321 111344 3666777764
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-14 Score=124.35 Aligned_cols=134 Identities=21% Similarity=0.314 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCC
Q 009397 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424 (535)
Q Consensus 345 ~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~ 424 (535)
.....+.|+++.+.+++-+...+.+|. .+...++.++|+. .+...|...-.+.+..|+|..||+|. |+
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS------~~~~~~r~~yl~~ya~~~f~~~tiLs-vt 75 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS------EDPLDGRFIYLPGYAEGNFVGPTILS-VT 75 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC------cCccCCceEEeeccccCCcccceEEE-ec
Confidence 456678888999999988877777776 5667888888875 24455554445678999999999998 99
Q ss_pred CCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCC
Q 009397 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490 (535)
Q Consensus 425 ~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~ 490 (535)
|+|.+..||+||||+..+..++++|+|.++|+++||.+..+||.|.+.++++....++|.+.+|-.
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ 141 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVP 141 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999975
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-10 Score=107.93 Aligned_cols=165 Identities=15% Similarity=0.226 Sum_probs=128.5
Q ss_pred ceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHH
Q 009397 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (535)
Q Consensus 303 ~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (535)
.-+||++|.|++.|+..++++.-.--| ..+.-.|+|||++.|+|+++++.+++.+. +. +-+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHH
Confidence 448999999999999999998765555 46788999999999999999999987663 11 112233444
Q ss_pred HHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcC--CCC
Q 009397 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS--RYG 460 (535)
Q Consensus 383 l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~g 460 (535)
-.+.++ .-+++.+.++.... -.--.|.++.|++.+.. . +-..+|+++..|++..||+++++.- +|+
T Consensus 73 sl~~i~---~l~~~~I~~~~~~~------~~~aSPilV~d~~h~~f--g-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~ 140 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFENV------PPPASPILVCDFTHSYF--G-DGPTGVITLHTFRTPKEAIELCAKETLPFD 140 (215)
T ss_pred HHHHHH---hcCCeEEEecccCC------CCCCCCEEEcCCCHHHc--C-CCCCeEEEEEccCCHHHHHHHHhcCCCCcc
Confidence 444444 47899988854322 12335999998887532 2 2456899999999999999999975 555
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCcc
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 493 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~ 493 (535)
+.|||++....+-.++.+|++..++||++.+.
T Consensus 141 -SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V~ 172 (215)
T PF07368_consen 141 -SVSIWNEKLASAYELAARLPCDTFYINCFNVD 172 (215)
T ss_pred -eEEEeCcHHHHHHHHHHhCCCCEEEEEeccCC
Confidence 89999999999999999999999999998654
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.5e-06 Score=97.25 Aligned_cols=95 Identities=14% Similarity=0.189 Sum_probs=77.0
Q ss_pred ccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeC
Q 009397 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257 (535)
Q Consensus 178 ~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~ 257 (535)
++..+.....|+|+++|++||| ..++.++..||++||.||+||++.++- .+ +.+|..+.+.+.
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~------~~Lp~~~~~~~~- 1130 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL------ADLPGLVAARID- 1130 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH------HhCccccccccc-
Confidence 6789999999999999999999 558889999999999999999998651 11 235666665552
Q ss_pred Cccchhhhhc--cccEEEEeCChHHHHHHHHHHhccC
Q 009397 258 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292 (535)
Q Consensus 258 ~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~ 292 (535)
.+..+.. .++.|.|+||.++.+.+.+..+++.
T Consensus 1131 ---~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905 1131 ---WTQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred ---cccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence 2334555 6999999999999999999988765
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.48 Score=49.72 Aligned_cols=257 Identities=18% Similarity=0.186 Sum_probs=120.7
Q ss_pred cccceeeeecceEEEEEcC-Cchhhh-hhHHHHHHHHhcCCEEEEecCCCch----hHHHHHHHHHHHHHHhcCCCCCcE
Q 009397 179 HKKAKVEFHPLGVVGAIVS-WNYPFH-NIFNPMLAAVFSGNGIVIKVSENAS----WSGCFYFRIIQAALAAVGAPENLV 252 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p-~n~P~~-~~~~~i~~AL~aGN~VV~kps~~~~----~s~~~~~~~i~~~l~~aG~p~~~v 252 (535)
+.....++.|+--|++.+| ..+|+. +++..++||-.+|..=|+-++|-.. .... --+.+.+|..+ ++
T Consensus 97 G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~v------L~Aa~~~Gv~e-vy 169 (412)
T PF00815_consen 97 GVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAV------LAAAHLAGVDE-VY 169 (412)
T ss_dssp TEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHH------HHHHHHTT-SE-EE
T ss_pred CcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHH------HHHHHHcCCCE-EE
Confidence 3445678899999999999 445554 4456688999999877665554222 2221 12234577743 22
Q ss_pred EEEeCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEE--ecCCCHHHHHHHHHHHH
Q 009397 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV--CDDVDVPHVAQIAVRAA 324 (535)
Q Consensus 253 ~~v~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV--~~daDl~~aa~~i~~~~ 324 (535)
. .|..+...+|.- .||.|+=.|..=|...=..-...-.+- -+.|.+=++| ++++|.+.++..++..+
T Consensus 170 ~--vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEv~ViAD~~A~p~~vAaDLLaQA 244 (412)
T PF00815_consen 170 K--VGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAGPSEVLVIADETANPEFVAADLLAQA 244 (412)
T ss_dssp E----HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES---------EEEEEE-TTS-HHHHHHHHHHHH
T ss_pred e--cccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCCCCceEEEECCCCCHHHHHHHHHHHh
Confidence 2 133333333322 899999888776543322222211111 1234444333 34589999888877554
Q ss_pred HHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCC
Q 009397 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (535)
Q Consensus 325 f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~ 404 (535)
=+... ...++|..+ +++.+++.+.+++.--. +. +. +.++++.+.
T Consensus 245 EHd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~---r~----~i~~~sl~~----------- 288 (412)
T PF00815_consen 245 EHDPD-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LP---RR----EIAEKSLEN----------- 288 (412)
T ss_dssp TT-TT------EEEEEES---HHHHHHHHHHHHHHHTT------------T---TH----HHHHHHHTT-----------
T ss_pred ccCCC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CC---ch----HHHHHHHHC-----------
Confidence 33321 234555554 44444444444321000 00 01 122222211
Q ss_pred CCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc-Ccc
Q 009397 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCG 483 (535)
Q Consensus 405 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l-~~G 483 (535)
| .++.++|.+||++++|..-- =-..|.++|. +.+..++ .+|
T Consensus 289 -------------------------------g---~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~---~~~~~~i~~AG 330 (412)
T PF00815_consen 289 -------------------------------G---AIIVVDSLEEAIELANEYAP-EHLELQVEDP---EELLEKIRNAG 330 (412)
T ss_dssp -----------------------------------EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-S
T ss_pred -------------------------------C---eEEEECCHHHHHHHHHHhhH-HHHHHHHcCH---HHHHHHhhccC
Confidence 1 24667899999999999422 1367888886 5667777 499
Q ss_pred eEEECCCCc----cccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 484 VAAINDFAS----NYMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 484 ~v~IN~~~~----~~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
.|++..+.. -|...+ | .+|..||.|.-+.. +|.+..++
T Consensus 331 aiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~-~FlK~~s~ 376 (412)
T PF00815_consen 331 AIFLGEYTPEALGDYAAGPNHVLPTGGTARFSSGLSVD-DFLKRISV 376 (412)
T ss_dssp EEEESTT--HHHHHHTSSS------TTGGGT---S-GG-GGEEEEEE
T ss_pred hhhcCCCCCHHHhhhccCCCccCCCCccccccCCCcHH-HccceeeE
Confidence 999998642 122222 1 89999999998884 56555443
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=1 Score=47.23 Aligned_cols=254 Identities=15% Similarity=0.172 Sum_probs=141.5
Q ss_pred ccceeeeecceEEEEEcCC-chhhh-hhHHHHHHHHhcCCEEEEecCCCch--hHHHHHHHHHHHHHHhcCCCCCcEEEE
Q 009397 180 KKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVIKVSENAS--WSGCFYFRIIQAALAAVGAPENLVDVI 255 (535)
Q Consensus 180 ~~~~~~~~PlGVv~~i~p~-n~P~~-~~~~~i~~AL~aGN~VV~kps~~~~--~s~~~~~~~i~~~l~~aG~p~~~v~~v 255 (535)
.....++.|+--|++.+|. .+|+. +++...+||-.+|+.=|+-++|-.. .....++ +.+.+|..+ ++.
T Consensus 102 v~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e-Iy~-- 173 (416)
T PRK13770 102 VECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-----ACYITQVNQ-VFQ-- 173 (416)
T ss_pred cEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-----HHHHcCCCe-eec--
Confidence 3445688999999999995 55554 4456688999999987776554311 1222121 123467652 122
Q ss_pred eCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeec-cCCcceEEE--ecCCCHHHHHHHHHHHHHH
Q 009397 256 TGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIV--CDDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 256 ~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~e-lgGk~p~iV--~~daDl~~aa~~i~~~~f~ 326 (535)
.|..+.-.+|.- .||+|+=.|..=|...=..-.. .|-+. +.|.+=+.| ++++|.+.++..++..+=+
T Consensus 174 iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 174 VGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG----QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 133343344432 7898887787654332211111 11111 134444333 3348999988888755433
Q ss_pred hcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCC
Q 009397 327 SSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~ 404 (535)
.. . .+.++|..+ +.++..+.+...+..+. + .+.+++++++
T Consensus 250 d~----~-a~~iLvT~s~~la~~V~~ev~~ql~~lp------------------r----~~i~~~al~~----------- 291 (416)
T PRK13770 250 DE----L-ARTYVISEDAQVLKDLESRIAKALPNVD------------------R----YDIVSKSIAN----------- 291 (416)
T ss_pred CC----C-CcEEEEeCCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHh-----------
Confidence 32 2 334555443 33444444444443331 0 1223333221
Q ss_pred CCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-cc
Q 009397 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 483 (535)
Q Consensus 405 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~G 483 (535)
+| .++-++|.|||++++|..--= -..|.++|. ..+..+++ +|
T Consensus 292 ------------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAG 334 (416)
T PRK13770 292 ------------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVG 334 (416)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEec
Confidence 11 235668999999999985221 245778876 56667775 99
Q ss_pred eEEECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeee
Q 009397 484 VAAINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 484 ~v~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
.|++..+..- |...+ | .+|+.||.|.-+.. +|.+.-+
T Consensus 335 aiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~-~FlK~~s 379 (416)
T PRK13770 335 ALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVN-DFLTRNT 379 (416)
T ss_pred eeccCCCCchhhhccccCCCCcCCCCcceeccCCCcHH-Heeccee
Confidence 9999765321 22221 1 89999999988874 4554443
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.62 Score=48.62 Aligned_cols=258 Identities=19% Similarity=0.220 Sum_probs=141.8
Q ss_pred ccccceeeeecceEEEEEcC---CchhhhhhHHHHHHHHhcCCEEEEecCCCch--hHHHHHHHHHHHHHHhcCCCCCcE
Q 009397 178 IHKKAKVEFHPLGVVGAIVS---WNYPFHNIFNPMLAAVFSGNGIVIKVSENAS--WSGCFYFRIIQAALAAVGAPENLV 252 (535)
Q Consensus 178 ~~~~~~~~~~PlGVv~~i~p---~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~--~s~~~~~~~i~~~l~~aG~p~~~v 252 (535)
.+-....++.|+--|++.+| .-||-. ++...+||-.+|+.=|+-++|-.. .....++ +.+.+|+.+ ++
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypSt-vLM~avPAkvAGv~~Iv~~tPp~~~gv~p~iL~-----AA~~~Gv~e-Iy 178 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPST-VLMNAVPAKVAGVEEIVVVTPPPKDGVNPEILA-----AARLAGVDE-VY 178 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHH-HHHhhccHhhcCCceEEEECCCCCCCCCHHHHH-----HHHHhCcHH-HH
Confidence 34556778899999999999 455443 445577999999986665444332 1222221 123366642 22
Q ss_pred EEEeCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcce-EEEec-CCCHHHHHHHHHHHH
Q 009397 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA-FIVCD-DVDVPHVAQIAVRAA 324 (535)
Q Consensus 253 ~~v~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p-~iV~~-daDl~~aa~~i~~~~ 324 (535)
++ |..+.-.+|.- .||+|+=.|+.-|...=..-.. ..-+=+. .|.+= +||-| ++|.+.++..++..+
T Consensus 179 ~v--GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g--~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 179 KV--GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG--VVGIDMI-AGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred Hc--cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC--CcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 21 33343344433 7999988887664322111111 1111111 23333 33333 499999988777554
Q ss_pred HHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCC
Q 009397 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (535)
Q Consensus 325 f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~ 404 (535)
=+. -. .+.++|..+ ++|.+++.+.+.+.-- . ..+ .+.+.++..
T Consensus 254 EHd----~~-a~aiLvT~s--~~la~~v~~~v~~~l~--------------~---l~~-~ei~~~~l~------------ 296 (425)
T COG0141 254 EHD----PD-AQAILVTDS--EELAEAVEAAVERQLE--------------T---LPR-AEIARKALE------------ 296 (425)
T ss_pred hcC----CC-ceEEEEeCc--HHHHHHHHHHHHHHHH--------------h---ccH-HHHHHHHHH------------
Confidence 333 22 344555554 4555555554432100 0 000 122222221
Q ss_pred CCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-cc
Q 009397 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 483 (535)
Q Consensus 405 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~G 483 (535)
-|| .|+.++|++||++++|..-- --..|.++|. +.+..+++ +|
T Consensus 297 -----------------------------~~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~~p---~~~l~~I~nAG 340 (425)
T COG0141 297 -----------------------------NYG---AIILVDDLDEAVEISNEYAP-EHLELQTENP---RELLGKIRNAG 340 (425)
T ss_pred -----------------------------hCC---eEEEECCHHHHHHHHHhhCh-HhhhhhhcCH---HHHHHHhcccc
Confidence 111 24667899999999998521 1356778886 45666664 99
Q ss_pred eEEECCCCc----cccCCC---C-CCCCCCcCcHHHhhccCceeee
Q 009397 484 VAAINDFAS----NYMCQV---F-KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 484 ~v~IN~~~~----~~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
.|+++.+.. -|...+ | .+|+-||.|.-+.. +|.+..+
T Consensus 341 sIFlG~~sPe~~GDY~aG~NHVLPT~g~AR~~s~L~v~-dF~K~~t 385 (425)
T COG0141 341 SIFLGHYSPESLGDYAAGPNHVLPTSGTARFSSGLSVY-DFLKRST 385 (425)
T ss_pred eeeecCCCCccccccccCCCccCCCCccchhcCCccHH-HhhhHHH
Confidence 999999632 122221 1 89999999888874 5554433
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.91 E-value=1.3 Score=46.20 Aligned_cols=255 Identities=18% Similarity=0.197 Sum_probs=142.3
Q ss_pred cccceeeeecceEEEEEcCC-chhhh-hhHHHHHHHHhcCCEEEEecCCCc---hhHHHHHHHHHHHHHHhcCCCCCcEE
Q 009397 179 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVIKVSENA---SWSGCFYFRIIQAALAAVGAPENLVD 253 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~-n~P~~-~~~~~i~~AL~aGN~VV~kps~~~---~~s~~~~~~~i~~~l~~aG~p~~~v~ 253 (535)
+.....++.|+--|++.+|. .+|+. +.+...+||-.+|..=|+-++|-. ......++ +.+.+|..+= +.
T Consensus 79 Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~eI-y~ 152 (393)
T TIGR00069 79 GVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-----AAKLAGVDEV-YK 152 (393)
T ss_pred CeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-----HHHHcCCCee-hh
Confidence 34556788999999999996 44443 445667899999988776555431 12222222 2244777531 11
Q ss_pred EEeCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeec-cCCcceEEEe--cCCCHHHHHHHHHHHH
Q 009397 254 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIVC--DDVDVPHVAQIAVRAA 324 (535)
Q Consensus 254 ~v~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~e-lgGk~p~iV~--~daDl~~aa~~i~~~~ 324 (535)
.|..+...+|.- .||.|+=.|..-|...=..-.. .|-+. +.|.+=++|. ++||.+.++..++..+
T Consensus 153 --vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQA 226 (393)
T TIGR00069 153 --VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG----DVGIDMPAGPSEVLVIADETANPEFVAADLLSQA 226 (393)
T ss_pred --cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 233343344432 7898888887654332211111 12222 1344444443 3489999888877554
Q ss_pred HHhcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCC
Q 009397 325 LQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402 (535)
Q Consensus 325 f~~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~ 402 (535)
=+.. . .+.++|..+ ..++..+.+.+.+..+. + .+.+++++++
T Consensus 227 EHd~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~al~~--------- 270 (393)
T TIGR00069 227 EHDP----D-AQAILVTTSEELAEAVQEEIERQLATLP------------------R----REIARKSLED--------- 270 (393)
T ss_pred ccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHh---------
Confidence 3322 2 334555443 34444444444444331 1 1233333321
Q ss_pred CCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-
Q 009397 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ- 481 (535)
Q Consensus 403 ~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~- 481 (535)
+| .++.++|.+||++++|..--= -..+.++|. ..+..+++
T Consensus 271 --------------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p---~~~l~~I~n 311 (393)
T TIGR00069 271 --------------------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNP---EELLPKIRN 311 (393)
T ss_pred --------------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhcCc
Confidence 11 135668999999999985221 245777776 55666664
Q ss_pred cceEEECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeee
Q 009397 482 CGVAAINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 482 ~G~v~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
+|.|++..+..- |...+ | .+|+.||.|.-+.. +|.+..+
T Consensus 312 AGaiFlG~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~-~F~K~~s 358 (393)
T TIGR00069 312 AGSIFLGPYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVL-DFLKRIT 358 (393)
T ss_pred cceeccCCCCchhhhhccCCCCcccCCCcceeecCCccHH-Hhcccee
Confidence 999999876321 22221 1 89999999988884 4544443
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.05 Score=65.24 Aligned_cols=101 Identities=12% Similarity=0.167 Sum_probs=74.4
Q ss_pred ccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeC
Q 009397 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257 (535)
Q Consensus 178 ~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~ 257 (535)
++.+|.....|+|+|+|+.+-. ...+.++.++|++||.+|+..++.. .. ++ .++|+.+.+.+..
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~------~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---RA----LV------AALPAAVQARIQL 1240 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---HH----HH------HhccHHHHhHhhh
Confidence 5788999999999999998733 3688999999999999888644432 11 11 4578888776532
Q ss_pred Cccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCcee
Q 009397 258 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296 (535)
Q Consensus 258 ~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~ 296 (535)
. ....+.. .++.|.|.|..+..+.+.++.+++.-|++
T Consensus 1241 ~--~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1241 A--KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred c--cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1 1112222 79999999999999999999887765544
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.71 E-value=3.4 Score=43.63 Aligned_cols=255 Identities=16% Similarity=0.147 Sum_probs=140.3
Q ss_pred cccceeeeecceEEEEEcCC-chhhh-hhHHHHHHHHhcCCEEEEecCCCc---hhHHHHHHHHHHHHHHhcCCCCCcEE
Q 009397 179 HKKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVIKVSENA---SWSGCFYFRIIQAALAAVGAPENLVD 253 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~-n~P~~-~~~~~i~~AL~aGN~VV~kps~~~---~~s~~~~~~~i~~~l~~aG~p~~~v~ 253 (535)
+.....++.|+.-|++.+|. .+|+. +++..++||-.+|..=|+-++|-. ......++ +.+.+|..+ ++.
T Consensus 111 Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~e-Iy~ 184 (431)
T PLN02926 111 GVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-----CAKKAGVTH-ILK 184 (431)
T ss_pred CeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-----HHHHcCCCe-eec
Confidence 34456788999999999996 44443 455667899999987666544331 12222222 234477753 122
Q ss_pred EEeCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCc--eeec-cCCcceEEEec--CCCHHHHHHHHHH
Q 009397 254 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTP--VTLE-LGGKDAFIVCD--DVDVPHVAQIAVR 322 (535)
Q Consensus 254 ~v~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~p--v~~e-lgGk~p~iV~~--daDl~~aa~~i~~ 322 (535)
.|..+...+|.- .+|+|+=.|..-|...=..-.. .+ |-.. ..|.+=++|.. ++|.+.++..++.
T Consensus 185 --vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G---~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 185 --AGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQN---SEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred --cCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhC---CCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 133343344432 7899888887654332211111 10 2221 13444444433 4899998888875
Q ss_pred HHHHhcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 323 AALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 323 ~~f~~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
.+=+.. . .+.++|..+ +.++..+.+.+.++.+. + .+.++++.+.
T Consensus 260 QAEHdp----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~sl~~------- 305 (431)
T PLN02926 260 QAEHGP----D-SQVVLVAVGDVDLDAIEEEVEKQCQSLP------------------R----GEIASKALGH------- 305 (431)
T ss_pred HhccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHC-------
Confidence 543332 2 334455544 22333333333333221 0 1222222211
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
-.|+.++|.+||++++|..--= -..|.++|. ..+..++
T Consensus 306 --------------------------------------g~iivv~~l~ea~~~~N~~APE-HLei~~~~~---~~~l~~i 343 (431)
T PLN02926 306 --------------------------------------SFIVVARDMAEAISFSNLYAPE-HLIVNVEDA---ESWLDKI 343 (431)
T ss_pred --------------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhcCH---HHHHhhc
Confidence 1246678999999999985211 245778876 5566666
Q ss_pred C-cceEEECCCCc----cccCCC---C-CCCCCCcCcHHHhhccCceeee
Q 009397 481 Q-CGVAAINDFAS----NYMCQV---F-KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 481 ~-~G~v~IN~~~~----~~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
+ +|.|++..+.. -|...+ | .+|.+||.|.-+.. +|.+..+
T Consensus 344 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~-~FlK~~s 392 (431)
T PLN02926 344 DNAGSVFLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLD-SFLKYMT 392 (431)
T ss_pred CccceeccCCCCchhhhccccCcCcccCCCcceeecCCCcHH-Hhcceee
Confidence 4 99999977532 122221 1 89999999988874 4554444
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.61 E-value=3.7 Score=43.36 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=140.9
Q ss_pred ccceeeeecceEEEEEcCC-chhhh-hhHHHHHHHHhcCCEEEEecCCC--chhHHHHHHHHHHHHHHhcCCCCCcEEEE
Q 009397 180 KKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVIKVSEN--ASWSGCFYFRIIQAALAAVGAPENLVDVI 255 (535)
Q Consensus 180 ~~~~~~~~PlGVv~~i~p~-n~P~~-~~~~~i~~AL~aGN~VV~kps~~--~~~s~~~~~~~i~~~l~~aG~p~~~v~~v 255 (535)
.....++.|+--|++.+|. .+|+. +.+...+||-.+|..=|+-++|- .......++ +.+.+|..+ ++.
T Consensus 112 v~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~-----AA~~~Gv~e-Iy~-- 183 (425)
T PRK00877 112 VRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILA-----AAALAGVDE-VYK-- 183 (425)
T ss_pred eEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe-eec--
Confidence 3445688999999999996 44443 44566789999998877655543 111222121 234477753 122
Q ss_pred eCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeec-cCCcceEEEe--cCCCHHHHHHHHHHHHHH
Q 009397 256 TGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIVC--DDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 256 ~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~e-lgGk~p~iV~--~daDl~~aa~~i~~~~f~ 326 (535)
.|..+.-.+|.- .||.|+=.|..-|...=..-.. .|-.. +.|.+=++|. ++||.+.++..++..+=+
T Consensus 184 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 259 (425)
T PRK00877 184 VGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG----VVGIDMIAGPSEILVIADETADPDFVAADLLSQAEH 259 (425)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC----CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 143344444432 7898888887654322111111 11111 1344444333 348999988888755433
Q ss_pred hcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCC
Q 009397 327 SSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~ 404 (535)
.. . .+.++|..+ ..++..+.+.+.+..+. + .+.+++++++
T Consensus 260 d~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~ia~~sl~~----------- 301 (425)
T PRK00877 260 DP----D-AQSILVTTSEELAEAVAAEVERQLATLP------------------R----AEIARASLEG----------- 301 (425)
T ss_pred CC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHh-----------
Confidence 32 2 334555443 33333333333333221 0 1222333221
Q ss_pred CCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc-Ccc
Q 009397 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCG 483 (535)
Q Consensus 405 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l-~~G 483 (535)
+|= |+.++|.|||++++|..--= -..+.++|. ..+..++ .+|
T Consensus 302 ------------------------------~g~---iivv~~leeai~~~N~~APE-HLel~~~~p---~~~l~~I~nAG 344 (425)
T PRK00877 302 ------------------------------QGA---IILVDDLEEAIELSNAYAPE-HLEIQTEDP---RALLDRIRNAG 344 (425)
T ss_pred ------------------------------CCE---EEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccc
Confidence 221 35668999999999985211 246788886 4555666 499
Q ss_pred eEEECCCCc----cccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 484 VAAINDFAS----NYMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 484 ~v~IN~~~~----~~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
.|++..+.. -|...+ | .+|+.||.|.-+.. +|.+..++
T Consensus 345 aiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~-~F~K~~s~ 390 (425)
T PRK00877 345 AIFLGPYTPESLGDYAAGPNHVLPTSGTARFSSGLSVY-DFLKRSSV 390 (425)
T ss_pred eeccCCCCchhhhhcccCCCcccCCCcceeecCCccHH-HhccceeE
Confidence 999987532 122222 1 89999999988884 55554443
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.47 E-value=4.2 Score=42.96 Aligned_cols=254 Identities=15% Similarity=0.150 Sum_probs=141.5
Q ss_pred ccceeeeecceEEEEEcCC-chhhh-hhHHHHHHHHhcCCEEEEecCCCch--hHHHHHHHHHHHHHHhcCCCCCcEEEE
Q 009397 180 KKAKVEFHPLGVVGAIVSW-NYPFH-NIFNPMLAAVFSGNGIVIKVSENAS--WSGCFYFRIIQAALAAVGAPENLVDVI 255 (535)
Q Consensus 180 ~~~~~~~~PlGVv~~i~p~-n~P~~-~~~~~i~~AL~aGN~VV~kps~~~~--~s~~~~~~~i~~~l~~aG~p~~~v~~v 255 (535)
.....++.|+--|++.+|. .+|+. +.+...+||-.+|..=|+-++|-.. .....++ +.+.+|..+ ++.
T Consensus 107 v~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e-Iy~-- 178 (426)
T PRK12447 107 VILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-----AMHLAGADE-IYV-- 178 (426)
T ss_pred eEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe-ehh--
Confidence 3455688999999999994 55554 4456788999999887765554311 2222222 223467642 122
Q ss_pred eCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeec-cCCcceEEEe--cCCCHHHHHHHHHHHHHH
Q 009397 256 TGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIVC--DDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 256 ~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~e-lgGk~p~iV~--~daDl~~aa~~i~~~~f~ 326 (535)
.|..+...+|.- .||+|+=.|..-|...=..-.. .|-+. +.|.+=+.|. +++|.+.++..++..+=+
T Consensus 179 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 254 (426)
T PRK12447 179 LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADDTADPELVATDLLGQAEH 254 (426)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 133343344432 7899888887654332221111 12221 1344443333 348999988888755433
Q ss_pred hcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCC
Q 009397 327 SSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~ 404 (535)
.. . .+.++|..+ +.++..+.+.+.++.+. + .+.+++++++
T Consensus 255 d~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~sl~~----------- 296 (426)
T PRK12447 255 GP----N-SPAVLITTSRKLAEEVLAEIERLLAILP------------------T----ADVASAAWRD----------- 296 (426)
T ss_pred CC----C-CceEEEECCHHHHHHHHHHHHHHHHhCC------------------H----HHHHHHHHHh-----------
Confidence 32 2 334555443 33344444444333321 0 1223333222
Q ss_pred CCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-cc
Q 009397 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 483 (535)
Q Consensus 405 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~G 483 (535)
+| .|+-++|.+||++++|..--= -..|.++|. ..+..+++ +|
T Consensus 297 ------------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAG 339 (426)
T PRK12447 297 ------------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYG 339 (426)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccc
Confidence 11 135668999999999985221 246778876 55667764 99
Q ss_pred eEEECCCCc----cccCCC---C-CCCCCCcCcHHHhhccCceeee
Q 009397 484 VAAINDFAS----NYMCQV---F-KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 484 ~v~IN~~~~----~~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
.|++..+.. -|...+ | .+|+.||.|.-+.. +|.+.-+
T Consensus 340 aiFlG~~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~-~FlK~~s 384 (426)
T PRK12447 340 ALFLGERTNVAYGDKVIGTNHVLPTSGAARYTGGLWVG-KFLKTVT 384 (426)
T ss_pred eeccCCCCchhhhhcccCCCcccCCCcceeecCCCcHH-Hhcccee
Confidence 999976532 122221 1 89999999988874 5554443
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=94.44 E-value=7.5 Score=40.71 Aligned_cols=254 Identities=18% Similarity=0.192 Sum_probs=138.2
Q ss_pred cccceeeeecceEEEEEcCCc-hhhh-hhHHHHHHHHhcCCEEEEecCCCc----hhHHHHHHHHHHHHHHhcCCCCCcE
Q 009397 179 HKKAKVEFHPLGVVGAIVSWN-YPFH-NIFNPMLAAVFSGNGIVIKVSENA----SWSGCFYFRIIQAALAAVGAPENLV 252 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~n-~P~~-~~~~~i~~AL~aGN~VV~kps~~~----~~s~~~~~~~i~~~l~~aG~p~~~v 252 (535)
+.....++.|+--|++.+|.- +|+. +.+...+||-.+|..=|+-++|-. ..... ++ +.+.+|..+ ++
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~i-L~-----aa~~~Gv~e-iy 155 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAI-LA-----AAKLAGVDE-IY 155 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHH-HH-----HHHHcCCcE-Ee
Confidence 455677889999999999954 5554 445667899999988776555432 22221 11 123366642 12
Q ss_pred EEEeCCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeec-cCCcceEEE-e-cCCCHHHHHHHHHHH
Q 009397 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIV-C-DDVDVPHVAQIAVRA 323 (535)
Q Consensus 253 ~~v~~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~e-lgGk~p~iV-~-~daDl~~aa~~i~~~ 323 (535)
. .|..+...+|.- .+|.|+=.|..-|...=..-.. .|-+. +.|.+=++| - +++|.+.++..++..
T Consensus 156 ~--vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQ 229 (390)
T cd06572 156 K--VGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSG----DVGIDMPAGPSEVLVIADETANPEFVAADLLSQ 229 (390)
T ss_pred c--cCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcC----CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhh
Confidence 2 233344444432 6888887776554322111111 11111 124443333 3 348999988877754
Q ss_pred HHHhcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccC
Q 009397 324 ALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401 (535)
Q Consensus 324 ~f~~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG 401 (535)
+=+. - ..+.++|..+ ..++..+.+.+.++.+. +.+ .++.+..+
T Consensus 230 AEH~----~-~a~aiLvT~s~~la~~V~~~v~~ql~~l~------------------r~~----~~~~~~~~-------- 274 (390)
T cd06572 230 AEHD----P-DSQAILVTTSEELAEAVEEEVERQLAELP------------------RRE----IAAKSLLD-------- 274 (390)
T ss_pred hccC----C-CCeEEEEECCHHHHHHHHHHHHHHHHhCC------------------cHH----HHHHHHHh--------
Confidence 4222 1 2334455443 23333333333333321 001 12222111
Q ss_pred CCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc-
Q 009397 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI- 480 (535)
Q Consensus 402 ~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l- 480 (535)
+| .++.++|.+||++++|..-- =-..|.++|.. .+..++
T Consensus 275 ---------------------------------~g---~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~---~~l~~i~ 314 (390)
T cd06572 275 ---------------------------------YG---AIILVDDLEEAIELANEYAP-EHLELQTEDPE---ELLEKIR 314 (390)
T ss_pred ---------------------------------CC---EEEEECCHHHHHHHHHhhch-hhheeHhcCHH---HHHhhCc
Confidence 11 24567899999999998522 13567788864 466666
Q ss_pred CcceEEECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeee
Q 009397 481 QCGVAAINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 481 ~~G~v~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
.+|.|++..+..- |...+ | .+|+.||.|.-+.. +|.+..+
T Consensus 315 nAGsiFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~-~F~K~~s 362 (390)
T cd06572 315 NAGSIFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVD-DFLKRIT 362 (390)
T ss_pred cceEEeecCCCchhhhccccCCCCccCCCcceeecCCCCHH-Hheecce
Confidence 4999999886321 22221 1 89999999888874 4554444
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=10 Score=39.36 Aligned_cols=240 Identities=16% Similarity=0.157 Sum_probs=130.6
Q ss_pred cccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe-C
Q 009397 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT-G 257 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~-~ 257 (535)
+-....++.|+--|++.+|.-|| .+.+...+||-.+|..=|+-++|-.......++ +.+.+|... +.. |
T Consensus 84 Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-----aa~~~Gv~e----Iy~vG 153 (368)
T PRK13769 84 GVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-----VAKELGVKG----VLAIG 153 (368)
T ss_pred CeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-----HHHHcCCCe----eeccc
Confidence 34456688999999999995444 345566889999999877766553212222222 234467642 222 3
Q ss_pred Cccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeec--cCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCC
Q 009397 258 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE--LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCA 333 (535)
Q Consensus 258 ~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~e--lgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~ 333 (535)
..+.-.++.. .+|+|+=.|..-|...=..-.. .|-.. -|-.--+||-|++|.+.++..++..+=+..
T Consensus 154 GAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----- 224 (368)
T PRK13769 154 GPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ----YVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----- 224 (368)
T ss_pred CHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhC----CcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC-----
Confidence 3333345544 8888887777654332221111 11111 122333555555887777766664432221
Q ss_pred CccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCc
Q 009397 334 GAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413 (535)
Q Consensus 334 ~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~ 413 (535)
..+.++|..+ +++.+++.+.+++ .... + . |
T Consensus 225 ~a~~iLvT~s--~~la~~V~~~v~~-------------------------------~~~~-~------~---------~- 254 (368)
T PRK13769 225 TSFAYLLSTD--AELLKAAEEIYRR-------------------------------ERTS-S------M---------G- 254 (368)
T ss_pred CCcEEEEECC--HHHHHHHHHHHHH-------------------------------HHHh-c------C---------C-
Confidence 1234444444 3444444433321 0000 0 0 0
Q ss_pred eeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcC-CCCcEEEEecCCHHHHHHHHhhc-CcceEEECCCC
Q 009397 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS-RYGLGCAVFSGSQHRAREIAAQI-QCGVAAINDFA 491 (535)
Q Consensus 414 ~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gL~asvfs~d~~~~~~~a~~l-~~G~v~IN~~~ 491 (535)
- -.|+.++|.+||++++|.. +--|. +.+. +.+..++ .+|.|+++.+.
T Consensus 255 -----------------------~-~~iivv~~leeai~~~N~~APEHLe--l~~~-----~~~~~~i~nAGsiFl~~p~ 303 (368)
T PRK13769 255 -----------------------P-LEVRKVAGVEEAVRFIDEIAPEHLE--VWGR-----REVAYRVRNVGAVSVNMPS 303 (368)
T ss_pred -----------------------C-CeEEEECCHHHHHHHHHhhChHheE--eeCc-----HHHHhhCCccCChhcCCch
Confidence 0 2467789999999999995 22333 3342 2255566 49999996542
Q ss_pred cc--ccCCC---C-CCCCCCcCcHHHhhccCcee
Q 009397 492 SN--YMCQV---F-KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 492 ~~--~~~~~---~-~SG~G~~~g~~gl~~~~~~~ 519 (535)
.. |...+ | .+|+.|+.|.-+.. +|.+.
T Consensus 304 a~GDY~aGpNHvLPT~G~AR~~sgLsv~-~FlK~ 336 (368)
T PRK13769 304 PYLDYVAGISHVLPTGGTARWRGIITPL-TFMKP 336 (368)
T ss_pred hhhccccCCCCcCCCCcceeccCCCcHH-Hcccc
Confidence 21 22221 1 89999999887774 44443
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.067 Score=56.62 Aligned_cols=116 Identities=13% Similarity=0.167 Sum_probs=84.7
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccccee---eeeecCC
Q 009397 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM---PIMKFNT 446 (535)
Q Consensus 370 ~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl---~v~~~~~ 446 (535)
+++.+ +..+..++...+.+++++++..+...+. .+.|-.+.++...|++...+.++- |++.. ......+
T Consensus 75 ~W~~~-~~~~R~~~L~~~Adlie~~~~~lA~~E~-----~d~GKp~~~a~~~Dl~~~~~~~ry--~ag~ad~~~~~~~~~ 146 (501)
T KOG2450|consen 75 DWAKR-DAAERGRLLRKLADLIEQDADVLAALEV-----LDNGKPYPEALVSDLPPAIDCFRY--YAGWADKIHGSTIPT 146 (501)
T ss_pred ccccC-CHHHHHHHHHHHHHHHHhhhHHHhhhcc-----cccCCcchhhhhcCchhhhhHHHh--hccchhhcccccCCC
Confidence 34433 5677889999999999999998888874 357778888887888877666554 44443 2344556
Q ss_pred HHHHHHHhhcCCCCcEEEEecCC---HHHHHHHHhhcCcceEEECCCCcc
Q 009397 447 DEEVVKLANDSRYGLGCAVFSGS---QHRAREIAAQIQCGVAAINDFASN 493 (535)
Q Consensus 447 ~~eai~~~n~~~~gL~asvfs~d---~~~~~~~a~~l~~G~v~IN~~~~~ 493 (535)
..+.+.+.+..+.|-...|--=| .-.+-+++-.|.+|+++||-+...
T Consensus 147 ~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~ 196 (501)
T KOG2450|consen 147 DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQ 196 (501)
T ss_pred CCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCC
Confidence 77888899999999555554445 345667888999999999987543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 535 | ||||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-54 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 4e-52 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 8e-52 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-51 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-51 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 6e-51 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 5e-49 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 8e-49 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-48 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 3e-48 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-48 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 4e-48 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 8e-48 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-47 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-47 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-47 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 4e-47 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-47 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-46 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-46 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-46 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-45 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-45 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 4e-45 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 9e-45 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 4e-44 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 5e-44 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 2e-43 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 3e-43 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 3e-43 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 3e-43 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 3e-43 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-43 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-43 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 4e-43 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 6e-43 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 2e-42 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 4e-42 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 4e-42 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-42 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 6e-42 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 6e-42 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 6e-41 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-40 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 2e-40 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 6e-40 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-39 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-39 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 6e-39 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-38 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-38 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-38 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 8e-38 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 2e-37 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 4e-37 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-36 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-35 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 5e-35 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 9e-35 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-34 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-34 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 3e-34 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 4e-34 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-34 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-33 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 4e-30 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 8e-30 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-29 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-29 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-28 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-28 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-26 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-25 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-25 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 7e-23 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-22 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 8e-22 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-21 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-20 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 4e-19 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-17 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-11 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-09 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 4e-09 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-09 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-04 |
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 333 bits (855), Expect = e-109
Identities = 114/447 (25%), Positives = 178/447 (39%), Gaps = 39/447 (8%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
S+ P + S A+VD A+KAQ WA + +R +
Sbjct: 22 VEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRA 81
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSG 174
+ + EH+E I E +++G T A EI S + + P
Sbjct: 82 AELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHGRISPSNTPGK 140
Query: 175 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSG 231
+ +++ GVVG I WN+P + P LA GN +VIK + + +G
Sbjct: 141 ENRVYRV------AKGVVGVISPWNFPLNLSIRSVAPALAV---GNAVVIKPASDTPVTG 191
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA 288
I G P ++ + G G+ V+ I F GS VGR + A
Sbjct: 192 ---GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248
Query: 289 --SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHR 342
+ V LELGG F+V D D+ A +AA GQ C R V
Sbjct: 249 INGGPMKTVALELGGNAPFVVLADADI----DAAAQAAAVGAFLHQGQICMSINRVIVDA 304
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
++ F+ + + VK++ G P A +G + L+ + A +GA + G
Sbjct: 305 AVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP 364
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
+ P V +V M++ +EE FGP++ ++K + + +LAN S +GL
Sbjct: 365 IE-------GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLS 417
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIND 489
AV+S RA + A QI G+ IND
Sbjct: 418 AAVWSKDIDRAAQFALQIDSGMVHIND 444
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 327 bits (842), Expect = e-107
Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 21/437 (4%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
T + T+ PAT + L P + E++ ++ A K W +S QR Q LR +
Sbjct: 2 TMMTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIG 61
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ + H E + + +R+ GK + A E+ + W G L PE
Sbjct: 62 QALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVE---- 116
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+++A +E+ PLGV+ AI+ WN+P + P+L A GN ++K + N +
Sbjct: 117 NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLA---GNSYLLKHAPNVTGCA---- 169
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
++I LA G P + + E +++ + + GS G I A L
Sbjct: 170 QMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALK 229
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
LELGG D FIV +D D+ + AV Q++GQ CA A+RF V I F +
Sbjct: 230 KCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFV 289
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
++ G PL + D+G + + ++L V ++ +GA +L G EG
Sbjct: 290 AAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGE-KIAGEGN--- 345
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
Y+ TV+ +V M ++E FGP+ I + LANDS +GL +F+ A
Sbjct: 346 YYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLA 405
Query: 474 REIAAQIQCGVAAINDF 490
E+AA+++CG IN +
Sbjct: 406 AEMAARLECGGVFINGY 422
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 327 bits (840), Expect = e-107
Identities = 108/425 (25%), Positives = 189/425 (44%), Gaps = 21/425 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P T + + + ++DE + A K W R + L + + EH++ + +
Sbjct: 11 PYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAK 70
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + + GK + ++ E+ + G + LKP +S A G
Sbjct: 71 MMTLEMGKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTG 125
Query: 191 VVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
V+ A WN+P + + P GN I++K + N S +II+ A GA
Sbjct: 126 VIMACEPWNFPLYQVIRVFAPNFIV---GNPILLKHAHNVPGSAALTAKIIKRA----GA 178
Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
PE + + + +++ + + GS G + A K L T+ELGG DAF
Sbjct: 179 PEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV DD D + + A + GQ C ++R V + Y + ++ + ++ AG PL
Sbjct: 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPL 298
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
+ + + EKL+ V +A+D GA++ + S+GA +F PT++ ++
Sbjct: 299 EADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYP-EIDSKGA---FFRPTILTDIAK 354
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
+ +E FGPI + D ++LANDS YGLG +V RA++++AQI+ G+
Sbjct: 355 DNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMT 414
Query: 486 AINDF 490
IN
Sbjct: 415 VINGR 419
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 321 bits (825), Expect = e-104
Identities = 121/434 (27%), Positives = 191/434 (44%), Gaps = 40/434 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + + ++++ A+KAQK WAKS+ + R+ L+ Y+ E+++ I
Sbjct: 29 PYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIM 88
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-----HKKAKVE 185
+ +R+TG T++ + E+ T + ++ G + K K+
Sbjct: 89 MIARETGGTIIKS-TIELEQTIAILDEAMTYT-------GELGGVKEVPSDIEGKTNKIY 140
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
PLGV+ +I +N+P + P +A GN +V K + SG II A
Sbjct: 141 RLPLGVISSISPFNFPMNLSMRSIAPAIAL---GNSVVHKPDIQTAISG---GTIIAKAF 194
Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P +++V+ E G+ ++++ I F GS VGR I A + + LEL
Sbjct: 195 EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALEL 254
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKI 355
GG + F V D DV AV AA+ GQ C R VH+D+Y FV +
Sbjct: 255 GGNNPFAVLSDADV----DRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTAR 310
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
VK + G K +G L EK ++ A G E+ G V
Sbjct: 311 VKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVL 363
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
P V V ++ K+ Q E F PI I+K +D+E + +AND+ YGL AVF+ + +
Sbjct: 364 TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423
Query: 476 IAAQIQCGVAAIND 489
A QI G+ +ND
Sbjct: 424 FALQIDSGMTHVND 437
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 321 bits (825), Expect = e-104
Identities = 130/434 (29%), Positives = 203/434 (46%), Gaps = 40/434 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA+ LG PALS+ EV++ + A+ AQK+W +R L + E +E+I E
Sbjct: 34 PASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGE 93
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW--------LKPEYRSSGRSMIHKKA 182
+ + K A +GE+ T + I E + S +++ ++
Sbjct: 94 LIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVERE- 151
Query: 183 KVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
PLGVV AI +NYP I P L GN +V K + S SG +++
Sbjct: 152 -----PLGVVLAISPFNYPVNLAAAKIA-PALVT---GNTVVFKPATQGSLSG---IKMV 199
Query: 239 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
+A A GAPE ++ V+TG G+ LV +D I F G G I A + PV
Sbjct: 200 EALADA-GAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--KMIPV 256
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGGKD IV DD D+ A V A SGQ C +R +V + V+ + ++
Sbjct: 257 VLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKEL 316
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
V+ ++ G P D+ + + + +Q L++DAL+ GA +L+ +G
Sbjct: 317 VEQLTVGSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNK----RQGN---LL 368
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PT++ +V M++ EE FGP++PI++ E + L+N S YGL ++F+ RA
Sbjct: 369 SPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428
Query: 476 IAAQIQCGVAAIND 489
I ++ G IN
Sbjct: 429 IGKHLEVGTVHINA 442
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 319 bits (820), Expect = e-103
Identities = 131/448 (29%), Positives = 220/448 (49%), Gaps = 28/448 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLR 115
P + ++ PAT +Y+G P + A+VD VA AR A W + +R +
Sbjct: 18 TKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIA 77
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSS 173
+K + E ++L ++ + +TG+ M + + + +K W + S
Sbjct: 78 AAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSY 137
Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWS 230
G+S++ ++ P+GVVGAIV+WN P N P L A G IV+K + +
Sbjct: 138 GQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLA---GCTIVLKPAAETPLT 188
Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
+ G PE ++ V+ G ETG+AL S+ +D F GS VGR + R A
Sbjct: 189 ANALAEVFAEV----GLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R R Y
Sbjct: 245 AEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLS 407
V+ V V ++ GPP +G L + +++ + +++GA ++ G L
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 408 EGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466
G +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +ANDS YGL +V+
Sbjct: 365 NG----FFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVW 420
Query: 467 SGSQHRAREIAAQIQCGVAAINDFASNY 494
+ + +I+ QI+ G IN +A +
Sbjct: 421 TTDVPKGIKISQQIRTGTYGINWYAFDP 448
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-103
Identities = 141/440 (32%), Positives = 215/440 (48%), Gaps = 34/440 (7%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L + +
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRS 176
+ +E I I S++ K A + E++ T E I + E GE + ++ +
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASK- 133
Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGC 232
K A V P+G+V AI +NYP I P L A GN I K S SG
Sbjct: 134 --KKIAVVRREPVGLVLAISPFNYPVNLAGSKIA-PALIA---GNVIAFKPPTQGSISG- 186
Query: 233 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+ +A A G P + + ITG E G+ +V V+ I F GS G+G I + A
Sbjct: 187 --LLLAEAFAEA-GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
+ P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V
Sbjct: 244 --MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
++ + V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK----REG 356
Query: 410 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+
Sbjct: 357 N---LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 413
Query: 470 QHRAREIAAQIQCGVAAIND 489
RA IA Q++ G IN+
Sbjct: 414 FPRAFGIAEQLEVGTVHINN 433
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 316 bits (812), Expect = e-102
Identities = 116/428 (27%), Positives = 192/428 (44%), Gaps = 32/428 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P +++ + PALSR E E + A K ++V +R L + K I E +E + +
Sbjct: 19 PYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHP 188
I + D GK + A E+ + + + P
Sbjct: 79 ILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVK-------EHRDEVIPSDDRLIFTRREP 130
Query: 189 LGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
+G+VGAI +N+P H I P +A GN IV S A +II+ AL
Sbjct: 131 VGIVGAITPFNFPLNLSAHKI-APAIAT---GNVIVHHPSSKAPLVCIELAKIIENALKK 186
Query: 245 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
P + +++TG E G+ +V + V+ I F GS VG +I + A + LELGG
Sbjct: 187 YNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGG 244
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
+ IV D D+ ++ + +GQ C V I F+ K ++
Sbjct: 245 VNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G PL K D+G L +EH+E ++ +V A+D+G ++L G F PT++
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL- 356
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481
V+ L + E F P++PI++ +EE++ +AN + YGL A+F+ +++ + A ++
Sbjct: 357 EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLE 415
Query: 482 CGVAAIND 489
G IND
Sbjct: 416 FGGVVIND 423
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 93/428 (21%), Positives = 178/428 (41%), Gaps = 29/428 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + +VD V AR+A WA+ +QR + L + + +
Sbjct: 27 PVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELAR 86
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL--KPEYRSSGRSMIHKKAKVEFHP 188
+ +TGK + ++ E+ + K+ + + K + +++ K P
Sbjct: 87 VIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHK------P 139
Query: 189 LGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
GVV +N+P H P L A GN +V K SE + A
Sbjct: 140 HGVVAVFGPYNFPGHLPNGHIVPALLA---GNCVVFKPSELTPKVAELTLKAWIQA---- 192
Query: 246 GAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 302
G P +++++ G ETG AL + +D + F GS G ++ + + LE+GG
Sbjct: 193 GLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGN 252
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSA 361
+ +V + D+ +++A S+GQ C A R V + + ++++ + ++
Sbjct: 253 NPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRV 312
Query: 362 GPPLA-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
G MGA+ L +E L + KGA+ L + +GA P ++
Sbjct: 313 GRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT--QPIDGA--ALLTPGIL 368
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V+ + EE FGP++ +++++ ++ AN ++YGL + S S+ R + +
Sbjct: 369 -DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES 427
Query: 481 QCGVAAIN 488
+ G+ N
Sbjct: 428 RAGIVNWN 435
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 313 bits (805), Expect = e-101
Identities = 113/446 (25%), Positives = 198/446 (44%), Gaps = 28/446 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
S ++ PAT + +G ++A+VD+ V A + +S K+R+ L +
Sbjct: 17 VESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKI 76
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM 177
+K ++ I + + + G + + + + E R G +
Sbjct: 77 VKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR--GDDL 134
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFY 234
+ K+ +GV G I WN+P + AA G+ +V+K SE ++
Sbjct: 135 VVKE------AIGVSGLITPWNFPTNQTSLKLAAAFAA---GSPVVLKPSEETPFAAVIL 185
Query: 235 FRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT 291
I G P+ + +++ G A G L V + F GS G IM A+K
Sbjct: 186 AEIFDKV----GVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241
Query: 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351
V+LELGGK +IV DDVD+ A+ + ++GQ C R V I F+++
Sbjct: 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAE 301
Query: 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEG 409
+ + V G P +G + + +++QN +N +++GAE+ G L +G
Sbjct: 302 LKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG 361
Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
YF PT+ +NV++ M + QEE FGP+M ++ +N +E +++AND++YGL V
Sbjct: 362 ----YFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGK 417
Query: 469 SQHRAREIAAQIQCGVAAINDFASNY 494
+ ++A I+ G IN+
Sbjct: 418 DKETLHKVARSIEAGTVEINEAGRKP 443
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 312 bits (803), Expect = e-101
Identities = 125/445 (28%), Positives = 197/445 (44%), Gaps = 39/445 (8%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
+ T + PAT + + A + A V+ +A A++AQK WA S R + L+
Sbjct: 26 DNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAAD 85
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH 179
+ E + + + + DTGK + + + + + + + + S ++
Sbjct: 86 IMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEF------------FGGIAPSALN 133
Query: 180 KK---AKVEFH-----PLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENA 227
+F PLGV I +WNYP I P L A GN +V K SEN
Sbjct: 134 GDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQ-QIACWKAAPALVA---GNAMVFKPSENT 189
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285
I+ A G P+ L +VI G +TG LV+ V K+ GS GR +
Sbjct: 190 PLGALKIAEILIEA----GLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
A+ L VT+ELGGK IV DD D+ A+ SSGQ C+ R +V +
Sbjct: 246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAK 305
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-- 403
A F+ + + +++ G PL +G L EK+ + + +GA ++ G
Sbjct: 306 ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPN 365
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
EGA Y PTV +V M + +EE FGP+M ++ F+ ++EV+ AN + +GL
Sbjct: 366 NVAGEGA---YVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAG 422
Query: 464 AVFSGSQHRAREIAAQIQCGVAAIN 488
VF+ RA + ++ G IN
Sbjct: 423 GVFTADLARAHRVVDGLEAGTLWIN 447
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 308 bits (791), Expect = 3e-99
Identities = 101/435 (23%), Positives = 173/435 (39%), Gaps = 38/435 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELIC 129
P + + + SR EV+ + K + +R LR I + ++
Sbjct: 39 PIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFA 98
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW------LKPEYRSSGRSMIHKKAK 183
E+ + GK A +GE+ +++ + +K Y + + ++
Sbjct: 99 EVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRR-- 155
Query: 184 VEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
PLGVV AI +NYP + I GN +V+K S + + +
Sbjct: 156 ---EPLGVVAAITPFNYPLFDAVNKIT-YSFIY---GNAVVVKPSISDPLPAAMAVKALL 208
Query: 240 AALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
A G P + + ++ + E +V+ V + F GS VG +++ + +
Sbjct: 209 DA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG--GVKQYVM 262
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGG D IV +D D+ A R +GQ C + R +Y V +VAK +
Sbjct: 263 ELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 417
S+ G P D+G L +++ + DA++KG +LA G G Y P
Sbjct: 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR----RLGP--TYVQP 376
Query: 418 TVI---VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
T + + M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 377 TFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIR 436
Query: 475 EIAAQIQCGVAAIND 489
++ G IND
Sbjct: 437 RAVRLLEVGAIYIND 451
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 307 bits (789), Expect = 4e-99
Identities = 113/450 (25%), Positives = 187/450 (41%), Gaps = 46/450 (10%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
+E + P T + S A++D V A +A W++++ +R LLK
Sbjct: 36 AGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS---NALLK 92
Query: 120 Y---IIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWL 166
I + + + + + GK + E+ +
Sbjct: 93 IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNL-----HAP--A 145
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKV 223
EY SMI + P+G+VG+I WNYP + P + GN +V K
Sbjct: 146 AGEYLPGHTSMIRRD------PIGIVGSIAPWNYPLMMMAWKLAPAIGG---GNTVVFKP 196
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGV 280
SE + R+I L PE +V+VITG ET G AL++ V + G
Sbjct: 197 SEQTPLTALKLARLIADIL-----PEGVVNVITGRGETVGNALINHPKVGMVSITGDIAT 251
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G+ ++ A+KT+ LELGGK IV D D+ V ++GQ+C A R Y
Sbjct: 252 GKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYA 311
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
IY V+ + V ++ + ++G L +++ + V A D+ +
Sbjct: 312 EAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITT 371
Query: 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460
G EG +F PTV+ ++++ E FGP++ + +F ++ V ANDS YG
Sbjct: 372 GGRTGSDEGF---FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYG 428
Query: 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
L +V++ +A A+++Q G IN
Sbjct: 429 LASSVWTKDISKAMRAASRLQYGCTWINTH 458
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 307 bits (789), Expect = 5e-99
Identities = 137/454 (30%), Positives = 216/454 (47%), Gaps = 45/454 (9%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFL 114
P ++ PAT +G PA ++ +VD VA A+ A WA +S R ++L
Sbjct: 19 PVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYL 78
Query: 115 RILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEK 164
R + + E + + ++ S D GK + +A +I EK+ +
Sbjct: 79 RAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKL-----DAR- 131
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVI 221
+ M K+ V P+GVVG I WNYP P LAA G ++
Sbjct: 132 ----QKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAA---GCAAIL 184
Query: 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSP 278
K SE AS + I + G P +++++TG E G L + VDK+ F GS
Sbjct: 185 KPSELASLTCLELGEICKEV----GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS 240
Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
G IM A++ + PV+LELGGK +V +DVD+ A+ A+ ++GQ C+ R
Sbjct: 241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
+H I F++++ K +K++ PL +G + EK+ V++A +GA IL
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 399 ARGS-FGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
GS HL +G +F PT+I +V M++ +EE FGP++ + F+T+EE + LAND
Sbjct: 361 TGGSRPEHLKKG----FFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLAND 416
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
+ YGLG AV S R + + G+ +N
Sbjct: 417 TVYGLGAAVISNDLERCERVTKAFKAGIVWVNCS 450
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 307 bits (788), Expect = 6e-99
Identities = 125/463 (26%), Positives = 195/463 (42%), Gaps = 55/463 (11%)
Query: 50 FI---YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
I + G Y PAT L S +VD V A A W +++
Sbjct: 27 LINGELVSGEGEK------QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTT 80
Query: 107 FKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTT----------CE 153
K R LLK I E+ ++ E+ SR+ GK + A EI
Sbjct: 81 PKVRA---ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAAR 137
Query: 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPML 210
+ G EY SMI + PLGVV +I WNYP P L
Sbjct: 138 CL-----NGL--AAGEYLEGHTSMIRRD------PLGVVASIAPWNYPLMMAAWKLAPAL 184
Query: 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS-- 267
AA GN +V+K SE + + + P +V+++ G +T G+ L
Sbjct: 185 AA---GNCVVLKPSEITPLTALKLAELAKDIF-----PAGVVNILFGRGKTVGDPLTGHP 236
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
V + GS G I+ + + ++ +ELGGK IV DD D+ V + +
Sbjct: 237 KVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYN 296
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
+GQ+C A R Y + IY V ++ V ++ +G P ++G L L H E++ V
Sbjct: 297 AGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAV 356
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
+A G + G G Y+ PT++ ++Q+E FGP++ + F+ +
Sbjct: 357 EEAKATGHIKVITGGEKRKGNGY---YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
E+VV ANDS+YGL +V++ RA ++A++Q G +N
Sbjct: 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTH 456
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 306 bits (787), Expect = 1e-98
Identities = 133/440 (30%), Positives = 207/440 (47%), Gaps = 41/440 (9%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+EPAT + L EVD+ V A+ A W+K + +R + + + I E ++ I
Sbjct: 41 FEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNI 100
Query: 129 CEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMI 178
++ + GKT+ +A +I + G+ + G +
Sbjct: 101 AKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTL-----SGQ-----HIQLPGGAF- 148
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFY 234
A PLGV I++WNYPF I P LA GN +V K S +G
Sbjct: 149 ---AYTRREPLGVCAGILAWNYPF-MIAAWKCAPALAC---GNAVVFKPSPMTPVTGVIL 201
Query: 235 FRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292
I A G P LV+V+ G AETG L +V K+ F GS G+ +M ++KT+
Sbjct: 202 AEIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
VTLELGGK ++ D ++ + + A+ A + GQ C R +V R+I F+ +V
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
K K++ G PL + MG L +K+ V A +GA +L G S+ +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 413 Q-YF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470
YF P V+ N M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 471 HRAREIAAQIQCGVAAINDF 490
RA +AA ++ G IN +
Sbjct: 438 SRAHRVAANLEAGTCYINTY 457
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 306 bits (785), Expect = 2e-98
Identities = 121/448 (27%), Positives = 207/448 (46%), Gaps = 29/448 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
P + + +P+T + S + D+ + A+KA + W +S +R F+ +
Sbjct: 35 DDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKI 94
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSSGR 175
L+ + + + S + G + A + T I + ++ + + + +
Sbjct: 95 LEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQ 154
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGC 232
+++H +GVVG I WN+P + + P L A G +V+K SE A S
Sbjct: 155 AILHYD------AIGVVGLITPWNWPMNQVTLKVIPALLA---GCTMVLKPSEIAPLSAM 205
Query: 233 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+ I+ A P + ++I G A G L + ++ I F GS G+ I +NAS
Sbjct: 206 LFAEILDEA----ALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
TL V LELGGK A I+ D D+ + + VR +SGQ+C R V + IY +
Sbjct: 262 NTLKRVCLELGGKGANIIFADADIDALQR-GVRHCFYNSGQSCNAPTRMLVEQAIYDKAI 320
Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA--RGSFGHLS 407
I + GP +G + E +K+Q+L+ +D+GA ++ G +
Sbjct: 321 KTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGME 380
Query: 408 EGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466
G Y+ PTV +V M++ +EE FGP++ ++ FNT++E V LAND+ YGL +
Sbjct: 381 RG----YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQ 436
Query: 467 SGSQHRAREIAAQIQCGVAAINDFASNY 494
S + + R IAAQ++ G+ +N
Sbjct: 437 SQDRSKCRRIAAQVRSGMVEVNGHELPG 464
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 301 bits (774), Expect = 2e-96
Identities = 120/472 (25%), Positives = 210/472 (44%), Gaps = 46/472 (9%)
Query: 44 QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
Q+ + + ++ P + + ++ + + + AR
Sbjct: 21 QSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAAR 80
Query: 97 KAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT--- 151
+A + W++ + + R + +R + I EH+E + + + DTGKT+ ++ ++
Sbjct: 81 RAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNV 139
Query: 152 -------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204
+K G + ++K+ P+GVV I WNYP
Sbjct: 140 FMYFAGLADKD-----GG--------EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQ 186
Query: 205 IF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AE 260
P LA G +V+K SE + F +++ G P+ +++I G +E
Sbjct: 187 ASWKIAPALAT---GCSLVMKPSEITPLTTIRVFELMEEV----GFPKGTINLILGAGSE 239
Query: 261 TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318
G+ + VD + F G G+ IM+NA+ +T + LELGGK+ I+ DD D
Sbjct: 240 VGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVD 299
Query: 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 378
A+ +GQ C+ R V I F + VK + G +MG + E
Sbjct: 300 QALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTE 359
Query: 379 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438
H K+++ ++ A +GA I G + +F PTVI N + +M+++QEE FGP+
Sbjct: 360 HRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPV 419
Query: 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
+ + F T++E ++LANDS YGL AVFS +A+ +A +++ G INDF
Sbjct: 420 VTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDF 471
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 6e-94
Identities = 101/445 (22%), Positives = 183/445 (41%), Gaps = 30/445 (6%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116
G + Y PA + + S A+ +E V +AR+A K+WA +R + +R
Sbjct: 30 GSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQ 89
Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS 176
+ + E +++ + S + GK +V+ +GE+ + + + G
Sbjct: 90 IGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSR-------MIGGPI 141
Query: 177 M----IHKKAKVEFHPLGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSG 231
+ +++P+G+VG I ++N+P N +A + GN + K + S
Sbjct: 142 LPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI-CGNVCLWKGAPTTSLIS 200
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+II L P + + G A+ G A+ V+ + F GS VG+ +
Sbjct: 201 VAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ 260
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIY 345
+ LELGG +A I +D D+ + V +AL + +GQ C A R ++H I+
Sbjct: 261 ERFGRSLLELGGNNAIIAFEDADL----SLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405
V+++ K + G P G L + V +A +G ++ G
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG--KV 374
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465
+ Y PT++ + H + E F PI+ + KF +EEV N+ + GL ++
Sbjct: 375 MDRPG--NYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSI 432
Query: 466 FSGSQHRARE--IAAQIQCGVAAIN 488
F+ R CG+ +N
Sbjct: 433 FTKDLGRIFRWLGPKGSDCGIVNVN 457
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 292 bits (749), Expect = 2e-93
Identities = 128/436 (29%), Positives = 202/436 (46%), Gaps = 42/436 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + P + + + A +AQ W +R +LR + I E I
Sbjct: 29 PATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISA 88
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
+ + GK A E+ T + I ++ GE + R ++ K+
Sbjct: 89 LIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGE--IIQSDRPGENILLFKR---- 141
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
LGV I+ WN+PF I P L GN IVIK SE + I A +
Sbjct: 142 --ALGVTTGILPWNFPFFLIARKMAPALLT---GNTIVIKPSEFTPNNA-----IAFAKI 191
Query: 243 AA-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
+G P + +++ G G+ L + V + GS G IM A+K +T V LE
Sbjct: 192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLE 251
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAK 354
LGGK IV DD D+ AV+A + S SGQ C AER YV + IY FV+++ +
Sbjct: 252 LGGKAPAIVMDDADLEL----AVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE 307
Query: 355 IVKSVSAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
+++V G P MG L E+++ V A+++GA + G +G
Sbjct: 308 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK-AVEGKG---Y 363
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
Y+PPT++++V M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A
Sbjct: 364 YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVA 423
Query: 474 REIAAQIQCGVAAIND 489
+ ++ G IN
Sbjct: 424 MKAIKGLKFGETYINR 439
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 292 bits (750), Expect = 3e-93
Identities = 122/463 (26%), Positives = 202/463 (43%), Gaps = 32/463 (6%)
Query: 45 TPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARK 97
+ + + S K + PAT + L + +VD+ V AR+
Sbjct: 10 PAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQ 69
Query: 98 A---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
A W +R + L L I + L+ + + + GK +A L ++ +
Sbjct: 70 AFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKT 129
Query: 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLA 211
+ + +K G P+GV G I+ WN+P P L+
Sbjct: 130 LRYCAGWADKIQGRTIPMDGNFF----TYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALS 185
Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS-- 268
GN +V+K +E + +I+ A G P +V+++ G+ T G A+ S
Sbjct: 186 C---GNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMD 238
Query: 269 VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
VDK+ F GS VG++I A K+ L V+LELGGK IV D D+ + + A +
Sbjct: 239 VDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYH 298
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
GQ C A R +V IY FV + + K G PL G E EK+ +L+
Sbjct: 299 QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLI 358
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
+GA++ G ++G + PTV +V M++ +EE FGP+ IMKF +
Sbjct: 359 ESGKKEGAKLECGGG-PWGNKGY---FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
++V+K AN++ YGL +F+ +A +++ +Q G +N +
Sbjct: 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY 457
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 293 bits (752), Expect = 3e-93
Identities = 122/442 (27%), Positives = 193/442 (43%), Gaps = 43/442 (9%)
Query: 68 CYEPA-TMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEH 124
P + +G +P S +V + VA ARKA W + S +R + + + I+
Sbjct: 42 RVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101
Query: 125 QELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSG 174
QE + I S + GK + A GEI + EG+
Sbjct: 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARAL-----EGQ--THNNIGDDR 153
Query: 175 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSG 231
++ ++ P+GVVG I WN+PF + + G +V+K SE S +
Sbjct: 154 LGLVLRE------PVGVVGIITPWNFPFIIASERVPWAIGS---GCTVVLKPSEFTSGTS 204
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
+ + A G P+ + +V+TG+ G+ L VD + F GS VG + A
Sbjct: 205 IRLAELAREA----GIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
++T+ V LELGGK IV D D+ A ++GQ C R V I
Sbjct: 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL 320
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ ++ I + V+ G PL + +GA+ H+EK+ + V + GAE+L G
Sbjct: 321 MERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREA 380
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
G Y+ PTV V M + +EE FGP++ + F T +E V LAN + +GL +V+S
Sbjct: 381 G---LYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWST 437
Query: 469 SQHRAREIAAQIQCGVAAINDF 490
+ A + +I+ G IN
Sbjct: 438 NLETALQTIRRIRAGRCWINSV 459
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 292 bits (750), Expect = 9e-93
Identities = 98/447 (21%), Positives = 194/447 (43%), Gaps = 31/447 (6%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G +E K+Q + PA + +G ++ ++ + A +A + W + ++R
Sbjct: 44 GERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERA---N 100
Query: 116 ILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172
IL+K I + + GK +A + + + + + + + +
Sbjct: 101 ILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEIL 159
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 232
S ++ + + P+GV I WN+ + +A + +GN +V+K +
Sbjct: 160 SRPG---EQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216
Query: 233 FYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+ +++ A G P+ +++ + G G+ LV I F GS VG + A+
Sbjct: 217 KFVEVLEDA----GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272
Query: 290 K------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
L V +E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D
Sbjct: 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD 332
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+Y + + + K+++ G P MG + + EK+ + + +G ++ G
Sbjct: 333 VYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE- 390
Query: 404 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
G S G +F PT+I +++ +MQEE FGP++ K N + +++AN++ YGL
Sbjct: 391 GDSSTG----FFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLT 446
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIND 489
AV + ++ + + G N
Sbjct: 447 GAVITRNRAHIEQAKREFHVGNLYFNR 473
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 290 bits (746), Expect = 1e-92
Identities = 127/439 (28%), Positives = 193/439 (43%), Gaps = 25/439 (5%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRI 116
S P+T + + + +VD+ V AR A W + R + L
Sbjct: 31 AVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNR 90
Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS 176
L I + + + + D GK V + L ++ + + + +K+ G
Sbjct: 91 LADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDF 150
Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCF 233
+ P+GV G I+ WN+P P LA GN +V+KV+E + +
Sbjct: 151 F----SYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT---GNVVVMKVAEQTPLTALY 203
Query: 234 YFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
+I+ A G P +V+++ GF T G A+ S VDK+ F GS +GR+I A
Sbjct: 204 VANLIKEA----GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 291 T-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
+ L VTLELGGK I+ D D+ + A A + GQ R +V DIY FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
+ KS G P K + G +K+ +N +GA++L G G
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG-IAADRG 378
Query: 410 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469
+ PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+
Sbjct: 379 Y---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
Query: 470 QHRAREIAAQIQCGVAAIN 488
+A ++ +Q G +N
Sbjct: 436 LDKANYLSQALQAGTVWVN 454
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 1e-91
Identities = 113/434 (26%), Positives = 193/434 (44%), Gaps = 22/434 (5%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
P + ++VD+ VA A++A +W K + + R + L L + +HQ
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
E + I + D G A + + + + +K + +
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV G ++ WNYP + LAA GN +VIK ++ + + + A
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA---GNTVVIKPAQVTPLTALKFAELTLKA- 231
Query: 243 AAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLE 298
G P+ +V+++ G G+ L V KI F GS VG+ IM++ + + V+LE
Sbjct: 232 ---GIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLE 288
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+
Sbjct: 289 LGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEK 348
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G PL + G H KL + +GA ++ G+ G +F PT
Sbjct: 349 MKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN-QVPRPGF---FFQPT 404
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREI 476
V +V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A +
Sbjct: 405 VFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYV 464
Query: 477 AAQIQCGVAAINDF 490
+ ++Q G IN +
Sbjct: 465 SDKLQAGTVFINTY 478
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 1e-91
Identities = 69/477 (14%), Positives = 149/477 (31%), Gaps = 53/477 (11%)
Query: 49 SFI---YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS 105
+ + +I G + +P T L +
Sbjct: 10 NHVAGQWIAGTGAG------ITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRAL 63
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK- 164
++ QR L ++K + + I++ ++G T D+ +I +++ G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASL 122
Query: 165 -----WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSG 216
S + V GV I ++N+P + P L + G
Sbjct: 123 GEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS---G 179
Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIF 274
+++K + +W R++ + A P + +I G + L S D + F
Sbjct: 180 VPVIVKPATATAWLT---QRMVADVVDAGILPPGALSIICGSS--AGLLDQIRSFDVVSF 234
Query: 275 VGSPGVGRMIMRNASKT--LTPVTLELGGKDAFIVCDDVDVPHV-----AQIAVRAALQS 327
GS + + + + ++ ++ I+C D + VR
Sbjct: 235 TGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVK 294
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
SGQ C R +V + + + ++ G P MG+L E E + +
Sbjct: 295 SGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGI 354
Query: 388 NDALDKGAEILARGSF----GHLSEGAVDQYFPPTV--IVNVNHTMKLMQEEAFGPIMPI 441
++ + + A P + + + ++ L E FGP+ +
Sbjct: 355 AALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASV 411
Query: 442 MKFNT--------DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
+ + V LA + L +++S +A ++ ++
Sbjct: 412 APYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAI 468
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 288 bits (739), Expect = 2e-91
Identities = 119/441 (26%), Positives = 199/441 (45%), Gaps = 42/441 (9%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEH 124
+PAT + LG EVD A +A + W+++ K+R+ R LL+ I +H
Sbjct: 46 SLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK---RYLLRIAELIEKH 102
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
+ + + D G+ + ++ E + E + R+ + +
Sbjct: 103 ADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAM------EDRTFPVDRDWL 155
Query: 185 EFH---PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ P G VG I WN P P LA GN +V+K +E + ++ I+
Sbjct: 156 YYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAF---GNTVVLKPAEWSPFTATKLAEIL 212
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
+ A P + +++ GF E G ALV+ V + G G+++MRNA+ L +
Sbjct: 213 KEA----DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRL 268
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
+ ELGGK +V D D+ V +G+ C + R V I+ FV +V +
Sbjct: 269 SPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVER 328
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-------SFGHLSE 408
+++ G PL + ++G L EH +++ V +GA +L G LS
Sbjct: 329 ARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSR 388
Query: 409 GAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467
G + PTV V NH MK+ QEE FGP++ + F +EE ++ AND++YGL VF+
Sbjct: 389 G----NYLLPTVFVGENH-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFT 443
Query: 468 GSQHRAREIAAQIQCGVAAIN 488
RA +A +++ G+ +N
Sbjct: 444 RDLERAHRLALELEAGMVYLN 464
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 283 bits (727), Expect = 7e-90
Identities = 121/431 (28%), Positives = 202/431 (46%), Gaps = 29/431 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P+T K +G PA +A+ + + A+ AQK WAK + + R+ LR I E++ ++
Sbjct: 35 PSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAP 94
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
+ + GK + A E+ T I + G+ + P + IHK
Sbjct: 95 MLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIEGD--ILPSDNQDEKIYIHKV---- 147
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P GVV I +WN+P P L GN +V+K ++ + +
Sbjct: 148 --PRGVVVGITAWNFPLALAGRKIGPALIT---GNTMVLKPTQETPLAT-----TELGRI 197
Query: 243 AA-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A G P+ +++VI G G+ L S I GS G+ I + +++ +TPV LE
Sbjct: 198 AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLE 257
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK +V DD D+ A+ A+ + GQ C ER YVH +Y F+++ +VK
Sbjct: 258 LGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKG 317
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G P+ MG C + + ++V++A+ +GA + G + ++ PT
Sbjct: 318 LKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPT 377
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V+V+V ++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S + +
Sbjct: 378 VLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAIS 437
Query: 479 QIQCGVAAIND 489
++ G IN
Sbjct: 438 DLEVGEVYINR 448
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 275 bits (707), Expect = 1e-86
Identities = 106/446 (23%), Positives = 177/446 (39%), Gaps = 31/446 (6%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G ++ ++ P+ + +G +AE + + A KA K W + R + L
Sbjct: 44 GEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLL 103
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRS 172
+ + + + GK V+A ++ E I ++ ++ P
Sbjct: 104 KAAALMRRRKRELEATLVYEVGKNWVEA-SADV---AEAIDFIEYYARAALRYRYPAVEV 159
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML-AAVFSGNGIVIKVSENASWSG 231
+ + PLG I WN+P IF M+ V GN ++ K +E+A G
Sbjct: 160 VPYPGED--NESFYVPLGAGVVIAPWNFPV-AIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA 288
F I A G P +V+ + G E G LV + I F GS VG I A
Sbjct: 217 AKVFEIFHEA----GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272
Query: 289 SKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+ +E GGK+A IV + D A+ V +A GQ C+ A R + +
Sbjct: 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ 332
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
Y + +V K + +S GP D+G + E K+ + + ++G +L
Sbjct: 333 GAYEPVLERVLKRAERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKR 391
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
EG + PTV V ++ QEE FGP++ +++ E +++AND+ YGL
Sbjct: 392 LE--GEGY---FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLT 446
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIN 488
V+S + + G N
Sbjct: 447 GGVYSRKREHLEWARREFHVGNLYFN 472
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 272 bits (698), Expect = 1e-85
Identities = 125/430 (29%), Positives = 199/430 (46%), Gaps = 31/430 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA LG P + E + A +A W + K+R LR ++EHQ+ +
Sbjct: 32 PANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLAR 91
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
+ + + GK + +A GEI I W EG+ R G K+ V
Sbjct: 92 LMTLEQGKPLAEA-KGEISYAASFIEWFAEEGK-------RIYGDTIPGHQADKRLIVIK 143
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV AI WN+P I P LAA G +V+K + +S + A LA
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAA---GCTMVLKPASQTPFSA-----LALAELA 195
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LEL
Sbjct: 196 IRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G L +G L + K++ + DAL+KGA ++ G +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGG----NFFQPTI 371
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+V+V K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R +
Sbjct: 372 LVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEA 431
Query: 480 IQCGVAAIND 489
++ G+ IN
Sbjct: 432 LEYGIVGINT 441
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 272 bits (697), Expect = 2e-85
Identities = 119/430 (27%), Positives = 195/430 (45%), Gaps = 30/430 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + P++ +V V + A ++ + RR++L + + E++E I
Sbjct: 34 PATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGR 93
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + GK +A GE+ + V +
Sbjct: 94 ILCMEHGKPWKEA-QGEVDYAAGFFDYCAKHIS-------ALDSHTIPEKPKDCTWTVHY 145
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV G IV WN+P I + LAA G VIK + + I ++
Sbjct: 146 RPVGVTGLIVPWNFPIGMIAKKLSAALAA---GCPSVIKPASETPLTM-----IAFFSVM 197
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
+ P+ +V+++ G A G+ L V + F GS VGR ++ + ++ + + LEL
Sbjct: 198 DKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ A + + GQ C A R +VH + F ++A+ V +
Sbjct: 258 GGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKM 317
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
+ G + D+G L + +K++ + DALDKGA ++A L +G +FPPTV
Sbjct: 318 TVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG---LFFPPTV 374
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ V+ M QEE FGP++P+ F T+EEV+ ND+ +GL VF+ RA+ +AA
Sbjct: 375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAG 434
Query: 480 IQCGVAAIND 489
++ G N
Sbjct: 435 LRFGHVGWNT 444
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 270 bits (694), Expect = 4e-85
Identities = 133/430 (30%), Positives = 210/430 (48%), Gaps = 31/430 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + LG P + AE + A+ A W + K+R LR +I + + +
Sbjct: 35 PATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLAL 94
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + + GK + +A GEI I W EG+ R +G +K+ V
Sbjct: 95 ILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGK-------RVAGDTLPTPDANKRIVVVK 146
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV AI WN+P I P LAA G IV+K +E+ +S + A LA
Sbjct: 147 EPIGVCAAITPWNFPAAMIARKVGPALAA---GCPIVVKPAESTPFSA-----LAMAFLA 198
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P+ ++ V+ G G + S+ V K+ F GS VGR++M ++ T+ +TLEL
Sbjct: 199 ERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLEL 258
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ + A+ + +++GQ C RF+VH +Y F ++A V +
Sbjct: 259 GGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL 318
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G +G L +K+++ + DAL KGA ++ G L +F PTV
Sbjct: 319 KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGH----GFFEPTV 374
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ V M + +EE FGP+ P+ +F ++EE+V+LAND+ +GL ++S R +A
Sbjct: 375 LTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEA 434
Query: 480 IQCGVAAIND 489
++ G+ IN
Sbjct: 435 LEYGMVGINT 444
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 8e-84
Identities = 124/434 (28%), Positives = 205/434 (47%), Gaps = 35/434 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA+ LG E V A +A W + S K+R LR +I++++ +
Sbjct: 33 PASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLAR 92
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + ++GK + +A GEI+ + + W E R G ++A V
Sbjct: 93 IITAESGKPLKEA-HGEILYSAFFLEWFSEEAR-------RVYGDIIHTPAKDRRALVLK 144
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV I WN+P I LAA G +V+K +E+ +S + A LA
Sbjct: 145 QPIGVAAVITPWNFPSAMITRKVGAALAA---GCTVVVKPAEDTPFSA-----LALAELA 196
Query: 244 A-VGAPENLVDVITGF----AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
+ G P + +VI E GEA+ + V KI F GS G++++ +A+ ++ V+
Sbjct: 197 SQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVS 256
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ-VAKI 355
+ELGG FIV D +V A+ + +++GQ C + +F V R I+ FV +
Sbjct: 257 MELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAM 316
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
K++ G G L + EK++ VNDA+ KGA ++ G L + +F
Sbjct: 317 KKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK----NFF 372
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL +S +
Sbjct: 373 EPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWR 432
Query: 476 IAAQIQCGVAAIND 489
+A Q++ G+ +N+
Sbjct: 433 VAEQLEVGMVGVNE 446
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 267 bits (686), Expect = 1e-83
Identities = 125/430 (29%), Positives = 205/430 (47%), Gaps = 33/430 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA +G P+LS A + E + + KA WA + K+R LR II + + I
Sbjct: 55 PADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIAL 114
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + + GK + +A GE++ I W E + R G ++ V
Sbjct: 115 IMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAK-------RVYGDTIPAPQNGQRLTVIR 166
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV AI WN+P I P LAA G ++++ ++ + + LA
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAA---GCTMIVRPADLTPLTA-----LALGVLA 218
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P ++ ++TG A E G L S+ V K+ F GS VGR++M + T+ ++LEL
Sbjct: 219 EKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLEL 278
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ A+ + +++GQ C A R YV R +Y F ++A VK +
Sbjct: 279 GGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKEL 338
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G +G + + K++ + DA+ KGA+++ G G +F P +
Sbjct: 339 KVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK----ELGG--LFFEPGI 392
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ V M + +EE FGP+ P+ F+T+EEV+ AND+ +GL ++ + RA ++
Sbjct: 393 LTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEA 452
Query: 480 IQCGVAAIND 489
++ G+ N
Sbjct: 453 LEYGMVGHNT 462
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 1e-79
Identities = 110/405 (27%), Positives = 183/405 (45%), Gaps = 17/405 (4%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
+++ E V +AR A + R Q L L + I E ++ + + D K +A
Sbjct: 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
E++ E+I +++ + +W E + + PLGVV I +WNYPF+
Sbjct: 78 EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
PM+ A+ +GN +V+K SE + II L ++L VI G L
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL-----DKDLYPVINGGVPETTEL 192
Query: 266 VSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 324
+ D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384
+SGQ C + I V ++ K +K + D G + H +++
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSR-DYGRIISARHFQRVM 311
Query: 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444
L+ +G ++ G+ A +Y PT++ +V+ +MQEE FGP++PI+
Sbjct: 312 GLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
+ EE ++ N L +FS + +++ A+ G A ND
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAND 406
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 2e-77
Identities = 109/408 (26%), Positives = 171/408 (41%), Gaps = 20/408 (4%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
S A++D + + A + R+Q L L + +I ++E + + D GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
L EI +I + L+ ++W+ P S + + V P GV I +NYP +
Sbjct: 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVN 145
Query: 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 263
P++ A+ GN +IK SE + +II A V VI G +
Sbjct: 146 LTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-----APEYVAVIQGGRDENS 200
Query: 264 ALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
L+S D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+ +
Sbjct: 201 HLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMF 260
Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382
+SGQ + YVH + + ++ + VK+ G L ++
Sbjct: 261 GKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN-----STGKLVTERQVQR 315
Query: 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442
L +L+ ++L + TV+ V LM EE FGPI+P++
Sbjct: 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVL 367
Query: 443 KFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
+F++ + N L VF A+ I QIQ G A +N
Sbjct: 368 EFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNG 415
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 252 bits (645), Expect = 7e-74
Identities = 98/446 (21%), Positives = 177/446 (39%), Gaps = 31/446 (6%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G+ ++ + P + LG EV + +A A+ A W + + R ++L
Sbjct: 538 GKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLL 597
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRS 172
+ + + + GK A ++ E I +L E + +P+
Sbjct: 598 KAAQAARKRLFELSAWQVLEIGKQWDQA-YADV---TEAIDFLEYYAREMIRLGQPQRVG 653
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN-PMLAAVFSGNGIVIKVSENASWSG 231
+ + P GV I WN+P I AA+ +GN +V K S S G
Sbjct: 654 HAPG---ELNHYFYEPKGVAAVIAPWNFPL-AISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
+ + A G PE + + G + G+ LV + I F GS G I+ A
Sbjct: 710 WHLVELFREA----GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765
Query: 289 SKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+K + + E+GGK+A I+ DD D+ + +A GQ C+ R V
Sbjct: 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD 825
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
+Y F+ ++ + K+ GP MGA+ + + ++ +G +
Sbjct: 826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPV 885
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
EG + P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L
Sbjct: 886 --PAGEG---YFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALT 940
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIN 488
+FS S + + + G IN
Sbjct: 941 GGIFSRSPEHLAKARREFRVGNLYIN 966
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 9e-74
Identities = 73/459 (15%), Positives = 150/459 (32%), Gaps = 51/459 (11%)
Query: 60 PQSETKVQCYEPATMKYLGY-FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
PQ++ T + L FP + EV++ A K + + + + +R LR +
Sbjct: 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIA 62
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKP 168
+ + I + +T V + GEI T ++ + + P
Sbjct: 63 SELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPN-P 120
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKV 223
+ I + LG V + N+P LAA G +++K
Sbjct: 121 TRAPLPKPDIR----RQQIALGPVAVFGASNFPLAFSAAGGDTASALAA---GCPVIVKG 173
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGV 280
+ I+ AL P+ + ++ G G+ALVS + + F GS G
Sbjct: 174 HTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGG 233
Query: 281 GRMIMRNASKTLTPVT--LELGGKDAFIVCDDVDV--PHVAQIAVRAALQSSGQNCAGAE 336
GR + A + P+ ELG + + +A V + GQ C
Sbjct: 234 GRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPG 293
Query: 337 RFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395
+ F+ +++ S + + ++ + D G
Sbjct: 294 VVFALNTPETQAFIETAQSLIRQQSPST------LLTPGIRDSYQSQVVSR---GSDDGI 344
Query: 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 455
++ + A+ + + + +EE FGP I+ +++ L+
Sbjct: 345 DVTFSQAESPCVASAL--FVTSSENWRKHP---AWEEEIFGPQSLIVVCENVADMLSLSE 399
Query: 456 DSRYGLGCAVFSGSQ--HRAREIAAQIQ--CGVAAINDF 490
L + + + + ++ +++ G N +
Sbjct: 400 MLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGW 438
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 227 bits (581), Expect = 1e-68
Identities = 71/413 (17%), Positives = 140/413 (33%), Gaps = 28/413 (6%)
Query: 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142
S EV + A KAQK A S +Q ++ + +E + +++ +TG +
Sbjct: 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202
+ + + + + + + + + + + M PLGVV ++ P
Sbjct: 69 DKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAV------PLGVVAGLIPSTNPT 122
Query: 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 261
+ L ++ +GN IV NA + RII A G P+ + +T +
Sbjct: 123 STVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQG 182
Query: 262 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
+ L+ I+ G + + + TP G + ++P +
Sbjct: 183 TDQLMKHKDTAVILATGGSAMVKAAYSSG----TPAIGVGPGNGPAFIERSANIPRAVKH 238
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
+ + +G CA + V R +A+ K + A +G L +
Sbjct: 239 ILDSKTFDNGTICASEQSVVVERVNKEAV---IAEFRKQGAHFLSDAEAVQLGKFILRPN 295
Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439
+V ++ A + + A T V + +E+ PI+
Sbjct: 296 GSMNPAIVGKSVQHIANLAGLT----VPADARVLIAEET---KVGAKIPYSREK-LAPIL 347
Query: 440 PIMKFNTDEEVVKLANDSRY----GLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
T +E +L+ D Y G + S + RE A + +N
Sbjct: 348 AFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN 400
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 234 bits (598), Expect = 2e-67
Identities = 96/428 (22%), Positives = 163/428 (38%), Gaps = 29/428 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
A L + + VA AR W+++ R L +
Sbjct: 535 KAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIA 594
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ R+ GKT+ DA L E+ E + ++G K E G + +
Sbjct: 595 LLQREGGKTLDDA-LSEL---REAADFCRYYAAQGRKLFGSETAMPGPTGESNA--LTMR 648
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
GV AI WN+P + AA+ +GN +V K +E ++ A G
Sbjct: 649 GRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA----GI 704
Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGK 302
P++ + ++TG G AL + + ++F GS V R I R + + P+ E GG
Sbjct: 705 PKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGI 764
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
+A I VA V +A +S+GQ C+ +V D+ + VA + + G
Sbjct: 765 NAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
P +G + +E ++L + + A G EG + P +
Sbjct: 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFA----GPAPEG---CFVAPHIFEL 877
Query: 423 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+ EE FGPI+ ++++ + E V++ + YGL V S I ++
Sbjct: 878 TEAGQ--LTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRV 935
Query: 481 QCGVAAIN 488
Q G +N
Sbjct: 936 QVGNIYVN 943
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 2e-66
Identities = 83/438 (18%), Positives = 141/438 (32%), Gaps = 48/438 (10%)
Query: 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 139
F + V+ A +A + SS K+R FLR + I E I EI S++TG
Sbjct: 57 FAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLP 116
Query: 140 MVDASLGEIMTTCEKITWLLSEGEK--WLK-------PEYRSSGRSMIHKKAKVEFHPLG 190
+ GE T ++ EK +L PE + + R I ++ P+G
Sbjct: 117 EARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEI----RLVQRPVG 171
Query: 191 VVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
V + N+P LAA G +V+K +G + AA+
Sbjct: 172 PVAVFGASNFPLAFSTAGGDTAAALAA---GCPVVVKGHSAHPGTGEIVAEAVDAAIRKT 228
Query: 246 GAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV--TLELG 300
G + +I G + + G ALV + + F GS GR + + P+ ELG
Sbjct: 229 GVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELG 288
Query: 301 GKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIV 356
+ + + + + +GQ C V F + + +
Sbjct: 289 SVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEAL 348
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
V+ L A + L S G
Sbjct: 349 AKVAPQTMLTDGIAKA---------YRDGQARFATRNAVKPLLATE----SSGRDASPNL 395
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS----QHR 472
+ EE FGP+ +++ + E+ +LA + L + + R
Sbjct: 396 FETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETAR 455
Query: 473 AREIAAQIQCGVAAINDF 490
+ + G +N F
Sbjct: 456 RLRPVLERKAGRVLVNGF 473
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 6e-66
Identities = 67/424 (15%), Positives = 150/424 (35%), Gaps = 43/424 (10%)
Query: 81 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
P + AE+D +A+ +KAQ+ +A S +Q + R + + + + + ++G +
Sbjct: 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGI 61
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
V+ + + E I ++ A+ P+G++ IV
Sbjct: 62 VEDKVIKNHFASEFI--YNKYKDEQTCGILEEDDNLGTMTIAE----PVGIICGIVPTTN 115
Query: 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 259
P L ++ + NGI+ A S +++ A A GAP++++ I +
Sbjct: 116 PTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSV 175
Query: 260 ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 317
E AL+ + I+ G PG+ + + P G ++ + D+
Sbjct: 176 ELSNALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 318 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 377
+ + +G CA + V ++Y + A + +
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS-----------HKAH----VLSK 276
Query: 378 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGA---VDQ---YFPPTVIVNVNHTMKLMQ 431
++K++ ++ A+I+ + ++E A V + V++
Sbjct: 277 TDADKVRKVLLIDGALNAKIVGQ-PATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH 335
Query: 432 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQ---HRAREIAAQIQCGV 484
E+ P + + + + E+ V A G +++ R R +++
Sbjct: 336 EK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTAR 394
Query: 485 AAIN 488
IN
Sbjct: 395 ILIN 398
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 5e-55
Identities = 103/447 (23%), Positives = 197/447 (44%), Gaps = 29/447 (6%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
YI +++ PAT + L P ++ ++D A +A K W+K + +R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRR- 67
Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
RIL + + +H+E + + + + GK +A LGE+ E + + +
Sbjct: 68 --ARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPS-LMMG 123
Query: 169 EYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVS 224
+ +S + +A +P+GVVG I +N+P + PM A+ GN ++K S
Sbjct: 124 DSLASIATDV---EAANYRYPIGVVGGIAPFNFPMM-VPCWMFPM--AIALGNTFILKPS 177
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282
E + + A G P+ + +V+ G + ++ + I FVGS VG
Sbjct: 178 ERTPLLTEKLVELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGE 233
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+ + S+ L V G K+ IV +D ++ V AA S+G+ C V
Sbjct: 234 YVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEE 293
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
I F++++ + V + G L +G + ++ ++ + + L++GA ++ G
Sbjct: 294 GIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR 353
Query: 403 FGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461
+ D YF PT+ NV M + ++E F P++ +++ +E +++AN S +
Sbjct: 354 ----ENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFAN 409
Query: 462 GCAVFSGSQHRAREIAAQIQCGVAAIN 488
G +F+ + + R I G+ IN
Sbjct: 410 GACLFTSNSNAIRYFRENIDAGMLGIN 436
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 2e-53
Identities = 101/452 (22%), Positives = 200/452 (44%), Gaps = 35/452 (7%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I + S + PAT + G S A++ V A+ AQ WA ++ ++R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRR- 88
Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
R+ +K+ + ++ + E+ SR+ GKT+ DA G+I+ E +++ K
Sbjct: 89 --ARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPH-LQKS 144
Query: 169 EYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYP-------FHNIFNPMLAAVFSGNGIV 220
E+ G + P+G+ I +N+P F A+ GN +
Sbjct: 145 EFTEGAGPGI---DMYSIRQPVGIGAGITPFNFPGMIPMWMF-----AP--AIACGNAFI 194
Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSP 278
+K SE ++ A G P +++V+ G +A+++ + + FVGS
Sbjct: 195 LKPSERDPSVPIRLAELMIEA----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250
Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAER 337
+ R + A+ G K+ I+ D D+ A + A S+G+ C A +
Sbjct: 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVA 310
Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397
V + + ++ +V+S+ GP K DMG + E +++++L++ +++GA++
Sbjct: 311 VPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKL 370
Query: 398 LARGSFGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
+ G +G + +F + +V M + + E FGP++ +++ EE + L
Sbjct: 371 VVDGR-DFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMK 429
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
YG G A+++ AR+ A++I G+ +N
Sbjct: 430 HEYGNGVAIYTRDGDAARDFASRINIGMVGVN 461
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 4e-49
Identities = 92/452 (20%), Positives = 171/452 (37%), Gaps = 44/452 (9%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
+ P + F +A ++ + A A+K W R +
Sbjct: 70 DEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR---AQ 126
Query: 116 ILLKY--IIE--HQELICEISSRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKP 168
+ LK ++ + + + GKT++ A + E I + +
Sbjct: 127 VFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAA---AELIDFFRFNAKFAVELEGE 183
Query: 169 EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSEN 226
+ S S + L G V AI +N F I N A GN ++ K S+
Sbjct: 184 QPISVPPS----TNHTVYRGLEGFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDT 237
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
A + +RI++ A G P N++ + T G+ + SS + I F GS +
Sbjct: 238 AMLASYAVYRILREA----GLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKH 293
Query: 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 337
+ R + +T + E GGK+ V DV V +R+A + GQ C+ R
Sbjct: 294 LWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSR 353
Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAE 396
YV + ++ ++ + + G P A+ + +++ + A +
Sbjct: 354 LYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413
Query: 397 ILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKL 453
+ G + S G Y+ P +I + + +M+EE FGP++ + + D E +KL
Sbjct: 414 SILAGGQCNESVG----YYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKL 469
Query: 454 AND-SRYGLGCAVFSGSQHRAREIAAQIQCGV 484
+ + YGL AVF+ + +E ++
Sbjct: 470 VDSTTSYGLTGAVFAQDKAIVQEATRMLRNAA 501
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} Length = 463 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 9e-06
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 57/290 (19%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD-------TGK 138
V+++ AR ++ A +QR + + L + + ++ I + +D
Sbjct: 29 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88
Query: 139 TMVD------ASLGEIMTTCEKITWLLSE--GEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
++ + L + +I + G L+ + + ++ V P+G
Sbjct: 89 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKN--LELEQVTV---PIG 142
Query: 191 VVGAI------VSWNYPFHNIFNPMLAAVF---SGNGIVIKVSENASWSGCFYFRIIQAA 241
V+ I A SGNG+++K + A+ S + Q A
Sbjct: 143 VLLVIFESRPDCLPQ-----------VAALAIASGNGLLLKGGKEAAHSNRILHLLTQEA 191
Query: 242 LAAVGAPENLVDVITGFAETGE--ALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
L+ G E V ++ E + L +D II GS + R I + A PV
Sbjct: 192 LSIHGVKE-AVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAA--KGIPVMGHS 248
Query: 300 GGKDAFIVC-----DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
G +C + V V ++ + + C E +HRD+
Sbjct: 249 EG-----ICHMYVDSEASVDKVTRLVRDSKCEYPAA-CNALETLLIHRDL 292
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 56/436 (12%), Positives = 123/436 (28%), Gaps = 106/436 (24%)
Query: 81 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
LS+ E+D + R F +L K + M
Sbjct: 44 SILSKEEIDHIIMSKDAVSGT--------LRLFWTLLSK-----------------QEEM 78
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN- 199
V + E++ +L+S +K E R SM+ + + L +N
Sbjct: 79 VQKFVEEVLRI--NYKFLMSP----IKTEQR--QPSMMTRMYIEQRDRL--------YND 122
Query: 200 ---YPFHNIFNP--------MLAAVFSGNGIVI-------K------VSENASWSGCFYF 235
+ +N+ L + ++I K V + F
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMR--NASKTLT 293
+I L +PE +++++ + L+ +D S + +R + L
Sbjct: 183 KIFWLNLKNCNSPETVLEML-------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 294 PVTLELGGKDAFIVCDDV-DVPHVA------QIAV--R-AALQSSGQNCAGAERFYVH-- 341
+ ++ +V +V + +I + R + H
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 342 --------RDIYALFVSQ-VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
+ + ++ + + V P + A + + N + D
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR--LSIIAESIRDGLATWDNWKHVNCD 353
Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVI--VNVNHTMKLMQ----EEAFGPIMPIM-KFN 445
K I+ S L + F + + + L+ + +M ++ K +
Sbjct: 354 KLTTIIES-SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 446 TDEEVVKLANDSRYGL 461
V K +S +
Sbjct: 413 KYSLVEKQPKESTISI 428
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 Length = 427 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 9e-04
Identities = 59/304 (19%), Positives = 115/304 (37%), Gaps = 65/304 (21%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD--------TGK 138
E+ E+ + R+A V ++ +++ + ++ + + + E ++ I E + D +
Sbjct: 15 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 74
Query: 139 TMVD------ASLGEIMTTCEKITWLL----SEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
++VD + E++ CE + L + W++ G + + +V P
Sbjct: 75 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVRE----DG--LRIARVRV---P 125
Query: 189 LGVVGAI------VSWNYPFHNIFNPMLAAVF---SGNGIVIKVSENASWSGCFYFRIIQ 239
+G +G I V+ + SGN I+++ +A S I+
Sbjct: 126 IGPIGIIYESRPNVTVE-----------TTILALKSGNTILLRGGSDALNSNKAIVSAIR 174
Query: 240 AALAAVGAPENLVDVI--TGFAETGE--ALVSSVDKIIFVGSPGVGRMIMRNASKTLTPV 295
AL PE+ V+ I T + E L + +I G G+ + NA+ PV
Sbjct: 175 EALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNAT---VPV 231
Query: 296 TLELGGKDAFIVC-----DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350
G C + D+ + + A Q G C AE+ VH I F+
Sbjct: 232 LETGVG-----NCHIFVDESADLKKAVPVIINAKTQRPGT-CNAAEKLLVHEKIAKEFLP 285
Query: 351 QVAK 354
+ +
Sbjct: 286 VIVE 289
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 535 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 96.83 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 96.6 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-103 Score=838.85 Aligned_cols=468 Identities=26% Similarity=0.423 Sum_probs=437.2
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
.+..++||+|+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+.|+++|..+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+|||+.+++..|+..+++.++|+++.+++..... .+.. .....+++++|+|||++|+|||||+...
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ-IPLR---ETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEE-EEEE---TTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcc-cccc---CCcceeEEecceeEEEEeccccCcchhh
Confidence 99999999999999999965679999999999999887654322 2211 2355788999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|++ +.++.|++ +|++|+||||+.+|+
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~----~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIY----TEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHH----HHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 999999999999999999999999999887775 55899999999999975 78899988 899999999999998
Q ss_pred HHHH-HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 283 MIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 283 ~v~~-~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
.+++ .+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 236 ~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcC
Confidence 8876 557789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++||++++||++........|+|++|||+.+++++|++++||+||||++|
T Consensus 316 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 395 (490)
T 2wme_A 316 GDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSI 395 (490)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEE
Confidence 99999999999999999999999999999999999999999876655678999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++|+
T Consensus 396 ~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl-~~ft 474 (490)
T 2wme_A 396 LVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTL-AHYT 474 (490)
T ss_dssp EEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHH-HTTE
T ss_pred EEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999998766655666 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 475 ~~K~v 479 (490)
T 2wme_A 475 RIKSV 479 (490)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 99998
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-98 Score=809.28 Aligned_cols=479 Identities=25% Similarity=0.406 Sum_probs=440.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHh--HHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~--~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
++++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| ..|+++|..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 4568999999998888999999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++. +|+..+++.++|+++..+++.... .+... .....+++++|+|||++|+|||||+...
T Consensus 112 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEM-IDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEE-ECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCee-cccCC--CCCcccccccCccEEEEECCCccHHHHH
Confidence 9999999999999999995 799999999999999887754322 22111 2346788999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ ++++|+||||+.+|+
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~----~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~ 263 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELM----EEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHH----HHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHH----HHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 999999999999999999999999998877765 56899999999999964 78889988 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 264 ~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG 343 (520)
T 3ed6_A 264 HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLG 343 (520)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||++|+
T Consensus 344 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 423 (520)
T 3ed6_A 344 NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423 (520)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEE
Confidence 99999999999999999999999999999999999999986432223579999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++
T Consensus 424 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl-~~~t~ 502 (520)
T 3ed6_A 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGL-EEYLV 502 (520)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHH-HTTEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999999998766555556 8999999999999 58999
Q ss_pred eeeec-CCCCCCCccccC
Q 009397 519 LKMLP-HFSVPAIWWCQG 535 (535)
Q Consensus 519 ~k~~~-~~~~~~~~~~~~ 535 (535)
.|++- .+..++.-||++
T Consensus 503 ~k~v~~~~~~~~~~~~~~ 520 (520)
T 3ed6_A 503 SKHILTNTNPQLVNWFSK 520 (520)
T ss_dssp EEEEEEESSCCCCCCSCC
T ss_pred eEEEEEcCCCCccCccCC
Confidence 99982 222334456764
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-98 Score=803.42 Aligned_cols=478 Identities=28% Similarity=0.454 Sum_probs=438.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH-----HHhhcCHHHHHHHHHHHHHHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYI 121 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-----~W~~~~~~~R~~iL~~la~~l 121 (535)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 445789999999988889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchh
Q 009397 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (535)
Q Consensus 122 ~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P 201 (535)
++|+++|++++++|+||+..++ ..|+..+++.++++++..+++......+..........+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999999 479999999999999988876544322211111235678999999999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCCh
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSP 278 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~ 278 (535)
+...++++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.+ +.++.|+. ++++|+||||+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 240 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEI----CKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS 240 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHH----HHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHH----HHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcH
Confidence 999999999999999999999999999999887776 556899999999999965 77888987 89999999999
Q ss_pred HHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc
Q 009397 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (535)
Q Consensus 279 ~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~ 358 (535)
.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 241 ~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 320 (503)
T 3iwj_A 241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKN 320 (503)
T ss_dssp HHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccce
Q 009397 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (535)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPv 438 (535)
+++|+|.++++++|||+++.++++++++|++++++|+++++||.+... ...|+|++|||+.+++++|++++||+||||
T Consensus 321 ~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 398 (503)
T 3iwj_A 321 IKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEH--LKKGFFIEPTIITDVTTNMQIWREEVFGPV 398 (503)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CCSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCcc--CCCCceeCCeeeecCCCCchhhCceeeCce
Confidence 999999999999999999999999999999999999999999985321 257999999999999999999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhc
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+|+++|.+|+ +
T Consensus 399 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~-~ 477 (503)
T 3iwj_A 399 LCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGL-D 477 (503)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHH-H
T ss_pred EEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHH-H
Confidence 9999999999999999999999999999999999999999999999999997655444455 8999999999999 5
Q ss_pred cCceeeee--cCCCCCCCcc
Q 009397 515 DPTKLKML--PHFSVPAIWW 532 (535)
Q Consensus 515 ~~~~~k~~--~~~~~~~~~~ 532 (535)
+|++.|++ .....+..||
T Consensus 478 ~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 478 NYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp TTEEEEEEEEECCSSCCCCS
T ss_pred HhhCeEEEEEeCCCCccccc
Confidence 89999998 3333344454
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-97 Score=798.72 Aligned_cols=462 Identities=29% Similarity=0.485 Sum_probs=430.6
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44689999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..+++ +|+..+++.++|++...++..... .+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 92 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDT-LPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCcc-cccc--CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 99999999999999994 899999999999998877643321 1111 1245678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|.+ +.++.|++ ++++|.||||+.+|+.|
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i 243 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFL----AERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHH----HHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999887776 456899999999999865 77889988 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.+.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 399 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA----LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRF 399 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEe
Confidence 99999999999999999999999999999999999998532 37999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++.|
T Consensus 400 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl-~~~~~~k 478 (484)
T 3ifg_A 400 ASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGI-DDYVVIK 478 (484)
T ss_dssp CCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTT-GGGEEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHH-HHhhceE
Confidence 9999999999999999999999999999999999999999999997554445556 9999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 479 ~v 480 (484)
T 3ifg_A 479 YL 480 (484)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-97 Score=801.21 Aligned_cols=463 Identities=26% Similarity=0.415 Sum_probs=434.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++|++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeee-ecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||+..++. +|+..+++.++|++++.+++.... .+.. .+...++++ +|+|||++|+|||||+...
T Consensus 90 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 164 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMI 164 (506)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHH
Confidence 999999999999999996 899999999999999998875532 2221 245677888 9999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.+++++ +.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 165 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~ 240 (506)
T 3rh9_A 165 AKKLSAALAAGCPSVIKPASETPLTMIAFFSV----MDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR 240 (506)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHH----HTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCccHHHHHHHHHH----HHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999887776 556899999999999965 77888888 799999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 241 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 320 (506)
T 3rh9_A 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVG 320 (506)
T ss_dssp HHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++|||+++.++++++++|++++++|+++++||.+.+ ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 321 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 397 (506)
T 3rh9_A 321 DGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMA 397 (506)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEE
Confidence 9999999999999999999999999999999999999998532 1279999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+....|| .||+||++|++|| ++|++
T Consensus 398 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~~ft~ 476 (506)
T 3rh9_A 398 LFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGL-FEFVE 476 (506)
T ss_dssp EECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHH-TTTEE
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHH-HHhcc
Confidence 999999999999999999999999999999999999999999999998766655566 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 477 ~K~v 480 (506)
T 3rh9_A 477 AQTV 480 (506)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9997
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-97 Score=797.56 Aligned_cols=460 Identities=27% Similarity=0.449 Sum_probs=429.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..+++ +|+..+++.++|++...++..... .+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 112 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHH
Confidence 99999999999999985 799999999999998877643321 1111 1235678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|.+ +.++.|++ +|++|+||||+.+|+.|
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l----~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 263 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVL----AEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL 263 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHH----HHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHH----HHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999877776 556899999999999865 77888988 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 264 ~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++||++++.++++++++|++++++|+++++||.+ ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAF 417 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEe
Confidence 999999999999999999999999999999999999984 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++.|
T Consensus 418 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~~t~~K 496 (504)
T 3ek1_A 418 DTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGI-EEYLETK 496 (504)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSG-GGGEEEE
T ss_pred CCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHH-HHhhceE
Confidence 9999999999999999999999999999999999999999999997654444555 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 497 ~v 498 (504)
T 3ek1_A 497 YI 498 (504)
T ss_dssp EE
T ss_pred EE
Confidence 87
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-97 Score=797.88 Aligned_cols=469 Identities=26% Similarity=0.419 Sum_probs=433.6
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
....+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 34566789999999988889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++. .|+..+++.++|++++.+++..+.. +.. ..+...+++++|+|||++|+|||||+..
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHH
Confidence 99999999999999999995 8999999999999999888754422 111 1345678899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l----l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G 240 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRI----AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAG 240 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHH----HHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHH
Confidence 999999999999999999999999999887776 456999999999999955 78888888 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 241 ~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 320 (497)
T 3k2w_A 241 KQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKV 320 (497)
T ss_dssp HHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++|+++++||++......+.|+|++|||+.+++++|++++||+||||++|
T Consensus 321 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 400 (497)
T 3k2w_A 321 GDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPI 400 (497)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEE
Confidence 99999999999999999999999999999999999999998422212237899999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+....|| .||+||++|.+|| ++|+
T Consensus 401 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~~ft 479 (497)
T 3k2w_A 401 VKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGL-EQYL 479 (497)
T ss_dssp EEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHH-HTTE
T ss_pred EEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHH-HHhc
Confidence 9999999999999999999999999999999999999999999999998766655556 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 480 ~~k~v 484 (497)
T 3k2w_A 480 EKKTV 484 (497)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-97 Score=799.99 Aligned_cols=463 Identities=27% Similarity=0.399 Sum_probs=430.8
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchh---hcCCcccCCCcccccccceeeeecceEEEEEcCCchhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~ 203 (535)
+|++++++|+||+..++ |+..+++.++|+++..++ ++.....+.. .+. .+++++|+|||++|+|||||+.
T Consensus 93 ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp HHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999888 999999999999988776 2332222211 234 7899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
..++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|..+.++.|++ .||+|+||||+.+|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll----~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G 241 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEIL----IEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTG 241 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHH----HHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHH----HHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHH
Confidence 99999999999999999999999999998877765 5689999999999996688899988 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 242 ~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 242 RKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++|+++++|| +........|+|++|||+.+++++|++++||+||||++|
T Consensus 322 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 400 (517)
T 3r31_A 322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCV 400 (517)
T ss_dssp CCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEE
T ss_pred CCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEE
Confidence 9999999999999999999999999999999999999999 421112357999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|++|| ++|+
T Consensus 401 ~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft 479 (517)
T 3r31_A 401 LDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAAL-EHYS 479 (517)
T ss_dssp EEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGG-GGSE
T ss_pred EEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999997655555556 9999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 480 ~~K~v 484 (517)
T 3r31_A 480 ELKTV 484 (517)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-97 Score=799.67 Aligned_cols=476 Identities=20% Similarity=0.306 Sum_probs=433.3
Q ss_pred CCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHH
Q 009397 38 VLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117 (535)
Q Consensus 38 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~l 117 (535)
++-|-.+....+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++
T Consensus 16 ~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 95 (521)
T 4e4g_A 16 ENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKF 95 (521)
T ss_dssp --------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 36787777777889999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcC
Q 009397 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197 (535)
Q Consensus 118 a~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p 197 (535)
++.|++|+++|++++++|+||+..++. +|+..+++.++|+++..+... ....+. ...+...+++++|+|||++|+|
T Consensus 96 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~-~~~~~~--~~~~~~~~~~~~P~GVV~~I~P 171 (521)
T 4e4g_A 96 VQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQK-SEFTEG--AGPGIDMYSIRQPVGIGAGITP 171 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTC-EEEEEE--EETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-Cccccc--CCCCcceeEEEcCCcEEEEECC
Confidence 999999999999999999999999994 899999999999987655432 221110 0123457889999999999999
Q ss_pred CchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEe
Q 009397 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFV 275 (535)
Q Consensus 198 ~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~ 275 (535)
||||+...++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ +||+|+||
T Consensus 172 wN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FT 247 (521)
T 4e4g_A 172 FNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELM----IEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFV 247 (521)
T ss_dssp SSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEE
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEE
Confidence 99999999999999999999999999999999998877764 5689999999999998777888888 79999999
Q ss_pred CChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHHHHHHHH
Q 009397 276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAK 354 (535)
Q Consensus 276 GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~ 354 (535)
||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|++
T Consensus 248 GS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~ 327 (521)
T 4e4g_A 248 GSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVP 327 (521)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccc
Q 009397 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434 (535)
Q Consensus 355 ~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~ 434 (535)
+++++++|+|.++++++||++++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+
T Consensus 328 ~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 407 (521)
T 4e4g_A 328 MVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEI 407 (521)
T ss_dssp HHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCC
T ss_pred HHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcc
Confidence 99999999999999999999999999999999999999999999999865433346799999999999999999999999
Q ss_pred ccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC--CcC
Q 009397 435 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD--EFD 507 (535)
Q Consensus 435 fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G--~~~ 507 (535)
||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+. ...|| .||+| +++
T Consensus 408 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~ 487 (521)
T 4e4g_A 408 FGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQH 487 (521)
T ss_dssp CSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBS
T ss_pred cCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999975433 33455 99999 799
Q ss_pred cHHHhhccCceeeee
Q 009397 508 SVHVILNDPTKLKML 522 (535)
Q Consensus 508 g~~gl~~~~~~~k~~ 522 (535)
|++|| ++|++.|++
T Consensus 488 G~~gl-~~ft~~K~v 501 (521)
T 4e4g_A 488 GTDSI-KFWTRTKTI 501 (521)
T ss_dssp HHHHH-HHTEEEEEE
T ss_pred hHHHH-HHhheEEEE
Confidence 99999 589999987
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-97 Score=796.11 Aligned_cols=464 Identities=25% Similarity=0.411 Sum_probs=429.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999877778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcc-cccccceeeeecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||++.++..+|+..+++.++|+++.++++.... .+.... ......+++++|+|||++|+|||||+...
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 195 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence 9999999999999999965899999999999999888765432 221100 11225688999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ +|++|+||||+.+|+
T Consensus 196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~----~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELT----LKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH----HHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH----HHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 999999999999999999999999999887775 56899999999999965 67888888 899999999999999
Q ss_pred HHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 283 ~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++|+++++||++.. ..|+|++|||+.+++++|++++||+||||++|
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 427 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP----RPGFFFQPTVFTDVEDHMYIAKEESFGPIMII 427 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCC----CCCCeECCEEEeCCCCCChhhhccccccEEEE
Confidence 99999999999999999999999999999999999999998431 36899999999999999999999999999999
Q ss_pred eecCC--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 442 MKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 442 ~~~~~--~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
++|+| +||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++
T Consensus 428 ~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l-~~ 506 (517)
T 2o2p_A 428 SRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAAL-NE 506 (517)
T ss_dssp EEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHH-HT
T ss_pred EEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHH-HH
Confidence 99999 99999999999999999999999999999999999999999997654444556 8999999999999 58
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 507 ~~~~k~v 513 (517)
T 2o2p_A 507 YLRIKTV 513 (517)
T ss_dssp TEEEEEE
T ss_pred hCCceEE
Confidence 9999987
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-96 Score=789.40 Aligned_cols=464 Identities=27% Similarity=0.411 Sum_probs=428.7
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|+++++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceee-eecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||+..+++.+|+..+++.++++++.......+...+ .+...+++ ++|+|||++|+|||||+...
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 178 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQV 178 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHH
Confidence 9999999999999999966899999999999998877654432221 12346778 99999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~ 254 (497)
T 3i44_A 179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEI----LDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254 (497)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHH----HHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcccHHHHHHHHHH----HHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 99999999999999999999999999887776 556899999999999965 78889987 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 255 ~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG 333 (497)
T 3i44_A 255 DISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG 333 (497)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|+
T Consensus 334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 412 (497)
T 3i44_A 334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLL 412 (497)
T ss_dssp CTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEE
Confidence 9999999999999999999999999999999999999994211 112479999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+. ......|| .||+||++|.+|| ++|++
T Consensus 413 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~-~~~~~~PfGG~k~SG~Gr~~G~~gl-~~~t~ 490 (497)
T 3i44_A 413 PFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGI-KEFLD 490 (497)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC-CCCTTCCBCCSGGGCCCCBSHHHHH-HTTEE
T ss_pred ecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC-CCCCCCCcCCcCcCcCCccchHHHH-HHhcc
Confidence 999999999999999999999999999999999999999999999963 33333445 8999999999999 58999
Q ss_pred eeeec
Q 009397 519 LKMLP 523 (535)
Q Consensus 519 ~k~~~ 523 (535)
.|++-
T Consensus 491 ~K~v~ 495 (497)
T 3i44_A 491 TKAIS 495 (497)
T ss_dssp EEEES
T ss_pred eeEEE
Confidence 99873
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-96 Score=791.93 Aligned_cols=470 Identities=28% Similarity=0.421 Sum_probs=433.4
Q ss_pred CCCCCCcccccCCcccCCCCCCe-EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHH
Q 009397 43 NQTPDNSFIYIPPRGRTPQSETK-VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121 (535)
Q Consensus 43 ~~~~~~~~~~i~~~~~~~~~~~~-~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l 121 (535)
......+.+||+|+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|
T Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 93 (503)
T 1a4s_A 14 SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93 (503)
T ss_dssp TCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 34445677899999998877778 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchh
Q 009397 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (535)
Q Consensus 122 ~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P 201 (535)
++|+++|++++++|+||+..++ .+|+..+++.++|++++.+++... ..+.. .+...+++++|+|||++|+|||||
T Consensus 94 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P 168 (503)
T 1a4s_A 94 RERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQ-HIQLP---GGAFAYTRREPLGVCAGILAWNYP 168 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEE-EEECG---GGCEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-cccCC---CCceeEEEEecCceEEEECCCcch
Confidence 9999999999999999999999 589999999999999998876542 22221 233568899999999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChH
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~ 279 (535)
+...++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.++.++.|++ ++++|+||||+.
T Consensus 169 ~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~----~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~ 244 (503)
T 1a4s_A 169 FMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIF----HEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVP 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHH
Confidence 9999999999999999999999999999999887775 5689999999999985577888888 799999999999
Q ss_pred HHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 280 ~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 245 ~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 324 (503)
T 1a4s_A 245 TGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAI 324 (503)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCC--CCCCceeccEEEEcCCCCCcccccccccc
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++|+|.++++++|||+++.++++++++|++++++|+++++||+....+. ...|+|++|||+.+++++|++++||+|||
T Consensus 325 ~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 404 (503)
T 1a4s_A 325 VVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGP 404 (503)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred CCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCc
Confidence 9999999999999999999999999999999999999999997531111 13689999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhh
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~ 513 (535)
|++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+||
T Consensus 405 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l- 483 (503)
T 1a4s_A 405 VMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATV- 483 (503)
T ss_dssp EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGG-
T ss_pred eEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHH-
Confidence 99999999999999999999999999999999999999999999999999997655444556 8999999999999
Q ss_pred ccCceeeee
Q 009397 514 NDPTKLKML 522 (535)
Q Consensus 514 ~~~~~~k~~ 522 (535)
++|++.|++
T Consensus 484 ~~f~~~k~v 492 (503)
T 1a4s_A 484 DYYSQLKTV 492 (503)
T ss_dssp GGSEEEEEE
T ss_pred HHhcCceEE
Confidence 589999998
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-96 Score=790.00 Aligned_cols=462 Identities=26% Similarity=0.415 Sum_probs=431.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
...+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 44689999999887788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++..+|+..+++.++|++++.+++..+.. +.. .+...+++++|+|||++|+|||||+..
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTI-PMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM 175 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEE-CCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCee-ecc---CCcceeEEecCCceEEEECCCcchHHH
Confidence 9999999999999999988678999999999999999888765421 211 234568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 251 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSL----IKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 251 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHH----HHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHH----HHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999887776 456899999999999954 67888988 79999999999999
Q ss_pred HHHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 252 ~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcC
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++||++++.++++++++|++++++|+++++||++. ...|+|++|||+.+++++|++++||+||||++
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 407 (501)
T 1bxs_A 332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQ 407 (501)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEE
Confidence 99999999999999999999999999999999999999999742 13689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|+ ++|
T Consensus 408 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l-~~f 486 (501)
T 1bxs_A 408 IMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGF-HEY 486 (501)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHH-HTT
T ss_pred EEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999997655444555 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 487 ~~~K~v 492 (501)
T 1bxs_A 487 TEVKTV 492 (501)
T ss_dssp EEEEEE
T ss_pred hCeeEE
Confidence 999997
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-97 Score=793.76 Aligned_cols=462 Identities=24% Similarity=0.377 Sum_probs=431.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++ +++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45679999999988776 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++..+|+..+++.++|+++.++++.... .+.. ..+...+++++|+|||++|+|||||+...+
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPA-AGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC-BEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC--cccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999955899999999999999887753321 1111 124567889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|++ +.++.|++ ++++|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~ 254 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999998887754 46 9999999999965 68899988 8999999999999999
Q ss_pred HHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCC
Q 009397 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 284 v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (535)
|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 255 i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 255 VLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-cEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga-~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
|.++++++|||+++.++++++++|++++++|+ ++++||.+. ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 410 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVT 410 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEE
Confidence 99999999999999999999999999999999 999999853 2479999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|+ .||+||++|.+|| ++|++
T Consensus 411 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l-~~~t~ 489 (498)
T 4f3x_A 411 RFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYAL-EDYTA 489 (498)
T ss_dssp EECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHH-HHTEE
T ss_pred EeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999999998766555556 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 490 ~k~v 493 (498)
T 4f3x_A 490 VRHI 493 (498)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9987
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-96 Score=790.04 Aligned_cols=462 Identities=27% Similarity=0.403 Sum_probs=430.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
+..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++|
T Consensus 19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (500)
T 1o04_A 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 98 (500)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence 34589999999887788999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++|++++++++..+. .+.. .+...+++++|+|||++|+|||||+..
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~ 174 (500)
T 1o04_A 99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLM 174 (500)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHH
Confidence 999999999999999998867899999999999999988876542 1211 234568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|. .+.++.|++ ++|+|+||||+.+|
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G 250 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANL----IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHH----HHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHH----HHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999887776 45689999999999995 477888988 79999999999999
Q ss_pred HHHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 251 ~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 330 (500)
T 1o04_A 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRV 330 (500)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCc
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++|||+++.++++++++|++++++|+++++||++. ...|+|++|||+.+++++|++++||+||||++
T Consensus 331 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 406 (500)
T 1o04_A 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQ 406 (500)
T ss_dssp BCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEE
Confidence 99999999999999999999999999999999999999999742 13689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|+ ++|
T Consensus 407 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~~f 485 (500)
T 1o04_A 407 ILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGL-QAY 485 (500)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGG-GGG
T ss_pred EEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999997654444455 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 486 ~~~K~v 491 (500)
T 1o04_A 486 TEVKTV 491 (500)
T ss_dssp EEEEEE
T ss_pred cceEEE
Confidence 999998
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-96 Score=793.76 Aligned_cols=463 Identities=27% Similarity=0.397 Sum_probs=432.8
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHh--HHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~--~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
.+++||+|+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| ..|+++|..+|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++ .+|+..+++.++|+++.++++.. +..+... .+...+++++|+|||++|+|||||+..
T Consensus 102 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~ 177 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEG-QTHNNIG--DDRLGLVLREPVGVVGIITPWNFPFII 177 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCE-EEECCSC--TTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-eeeccCC--CCceeEEEeccceEEEEECCCccHHHH
Confidence 9999999999999999999 69999999999999999887643 2222211 235678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ +||+|+||||+.+|
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 253 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELA----REAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVG 253 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHH----HHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence 9999999999999999999999999999887775 45899999999999954 78889988 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 254 ~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 333 (528)
T 3u4j_A 254 TKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAF 333 (528)
T ss_dssp HHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++||++++.++++++++|++++++|+++++||.+... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 334 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 410 (528)
T 3u4j_A 334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR---EAGLYYAPTVFAGVTPDMSIAREEIFGPVLST 410 (528)
T ss_dssp ECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT---TTSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC---CCCcEecceEEecCCCCCccccceeeccEEEE
Confidence 999999999999999999999999999999999999999985321 27999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|++|| ++|+
T Consensus 411 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft 489 (528)
T 3u4j_A 411 LTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGF-DEYS 489 (528)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHH-HHTE
T ss_pred EEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999998765555556 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 490 ~~K~v 494 (528)
T 3u4j_A 490 QFKGV 494 (528)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-95 Score=783.18 Aligned_cols=462 Identities=27% Similarity=0.466 Sum_probs=430.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34589999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++. .|+..+++.++|++....+..... .+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 89 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT-IPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccc--CCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 99999999999999994 899999999999998876643221 1111 1245678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.+ +.++.|++ ++++|.||||+.+|+.|
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l----~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i 240 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAEL----AIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 240 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHH----HHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999887776 556899999999999964 77888988 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 241 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T 3jz4_A 241 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDG 320 (481)
T ss_dssp HHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCT
T ss_pred HHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.+. ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 321 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 396 (481)
T 3jz4_A 321 LDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRF 396 (481)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred ccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEE
Confidence 9999999999999999999999999999999999999853 246899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++.|
T Consensus 397 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~-~~~t~~k 475 (481)
T 3jz4_A 397 KDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGI-EDYLEIK 475 (481)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHH-HTTEEEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHH-HHhhcee
Confidence 9999999999999999999999999999999999999999999997665555556 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 476 ~v 477 (481)
T 3jz4_A 476 YM 477 (481)
T ss_dssp EE
T ss_pred EE
Confidence 87
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-96 Score=784.73 Aligned_cols=451 Identities=26% Similarity=0.416 Sum_probs=418.6
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~ 130 (535)
+||+|+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999875 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHH
Q 009397 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (535)
Q Consensus 131 ~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~ 210 (535)
++++|+||+..+++ +|+..+++.++|++++++++.... .+.. +...+++++|+|||++|+|||||+...+++++
T Consensus 79 ~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 152 (486)
T 3pqa_A 79 ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIA 152 (486)
T ss_dssp HHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHH
Confidence 99999999999995 799999999999999988864432 2221 34678999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 211 ~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
+||++||+||+|||+.+|+++.++++++.++|+++|+|+|++|+|+|+. +.++.|++ ++|+|+||||+.+|+.|++.
T Consensus 153 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~ 232 (486)
T 3pqa_A 153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKK 232 (486)
T ss_dssp HHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976 55888887 89999999999999999998
Q ss_pred HhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCC
Q 009397 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (535)
Q Consensus 288 aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (535)
++ +||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 233 aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 310 (486)
T 3pqa_A 233 AG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE 310 (486)
T ss_dssp CC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcC
Confidence 87 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCH
Q 009397 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (535)
Q Consensus 368 ~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 447 (535)
++++|||+++.++++++++|++++++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 311 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~- 381 (486)
T 3pqa_A 311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE- 381 (486)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-
Confidence 99999999999999999999999999999999997 26899999999 9999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 448 ~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+. ...|| .||+||++|.+|| ++|++.|++
T Consensus 382 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl-~~f~~~k~v 460 (486)
T 3pqa_A 382 EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAM-EEMSNIKTI 460 (486)
T ss_dssp HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHH-HHTEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHH-HHhhceEEE
Confidence 99999999999999999999999999999999999999999986532 23345 8999999999999 589999997
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-96 Score=787.60 Aligned_cols=461 Identities=28% Similarity=0.470 Sum_probs=429.3
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++++++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999887778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++..+|+..+++.++|+++.++++.... .+.. .....+++++|+|||++|+|||||+...++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVN 165 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence 999999999999999965899999999999999988865532 1111 123568899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 166 KIAPALLAGCTIVLKPAAETPLTANALAEVF----AEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHTTCEEEEECBTTSCHHHHHHHHHH----HHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCEEEEecCCccHHHHHHHHHHH----HHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999887775 4589999999999995578888988 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++|||+++.++++++++|++++++|+++++||++... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 99999999999999999999999999999999999985321 1368999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeee
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++. .....|| .||+||++|.+|| ++|++.|+
T Consensus 400 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl-~~~~~~k~ 477 (495)
T 3b4w_A 400 TEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGV-EHFTQQKS 477 (495)
T ss_dssp SHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHH-HTTEEEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHH-HHhcceeE
Confidence 9999999999999999999999999999999999999999999976 4444555 8999999999999 58999999
Q ss_pred e
Q 009397 522 L 522 (535)
Q Consensus 522 ~ 522 (535)
+
T Consensus 478 v 478 (495)
T 3b4w_A 478 V 478 (495)
T ss_dssp E
T ss_pred E
Confidence 8
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-95 Score=787.89 Aligned_cols=464 Identities=25% Similarity=0.403 Sum_probs=429.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++. .|+..+++.++|++++.+++... ..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 107 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 9999999999999996 89999999999999988876542 12211 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+.|+
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEIL----KEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHH----HHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999887775 56899999999999964 67888887 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 338 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCC----CCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH----LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~----~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
++++++|||+++.++++++++|++++++|+++++||++.. .+....|+|++|||+.+ +++|++++||+||||++|
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v 417 (515)
T 2d4e_A 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVA 417 (515)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEE
T ss_pred cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEE
Confidence 9999999999999999999999999999999999998532 01113689999999999 999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++|+
T Consensus 418 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~~~ 496 (515)
T 2d4e_A 418 IPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYAL-DFYT 496 (515)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHH-HHHE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHH-HHhC
Confidence 9999999999999999999999999999999999999999999999997655444556 8999999999999 5799
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 497 ~~K~v 501 (515)
T 2d4e_A 497 DLKTI 501 (515)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 99998
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-96 Score=787.04 Aligned_cols=457 Identities=29% Similarity=0.450 Sum_probs=424.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++|+++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccc---ccccceeeeecceEEEEEcCCchhhhhh
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++++++|+||+..++. +|+..+++.++|++++.+++.... .+..... .....+++++|+|||++|+|||||+...
T Consensus 92 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 92 GELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 9999999999999995 799999999999999888765422 1111000 0345688999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~l----l~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEA----LADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHH----HHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999877765 567999999999999964 78888988 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.++ +||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|. +++++||++++.++++++++|++++++|+++++||+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 395 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPII 395 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEE
Confidence 999 999999999999999999999999999999999997 368999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.... ....|| .||+||++|.+|| ++|+
T Consensus 396 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~-~~f~ 474 (505)
T 3prl_A 396 RVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSL-LSMT 474 (505)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHH-HHTE
T ss_pred EeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHH-HHhh
Confidence 999999999999999999999999999999999999999999999998653 233456 9999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 475 ~~k~v 479 (505)
T 3prl_A 475 RERVT 479 (505)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-95 Score=784.12 Aligned_cols=463 Identities=25% Similarity=0.387 Sum_probs=427.4
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
.+....+||+|+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++
T Consensus 20 ~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 20 GLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp --CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 334456899999998766 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+..
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL-AAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEeeecCCeEEEECCCcchHHH
Confidence 99999999999999999995449999999999999988876432 11211 1233568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|. .+.++.|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999998887754 46 999999999995 477888988 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 251 ~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CcEeccCC-CCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~G-a~~l~gG~-~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
|+|.++++++|||+++.++++++++|++++++| +++++||+ +. +.|+|++|||+.+++++|++++||+||||+
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 405 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVV 405 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceE
Confidence 999999999999999999999999999999999 99999997 31 268999999999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++
T Consensus 406 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ 484 (495)
T 1wnd_A 406 SVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGL-ED 484 (495)
T ss_dssp EEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHH-HT
T ss_pred EEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHH-HH
Confidence 999999999999999999999999999999999999999999999999997655445556 8999999999999 58
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 485 f~~~k~v 491 (495)
T 1wnd_A 485 YTVVRHV 491 (495)
T ss_dssp TEEEEEE
T ss_pred hhCeEEE
Confidence 9999987
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-95 Score=782.03 Aligned_cols=461 Identities=28% Similarity=0.434 Sum_probs=430.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||++.++. +|+..+++.++|++++.+++.++.. +.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 87 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 87 SALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999995 8999999999999998887665432 111 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+. +.++.|++ ++++|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIV----DEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHH----HHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999887775 45899999999999965 57888887 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 366 A-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 366 ~-~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
+ +++++|||+++.++++++++|++++++|+++++||++.+ ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~ 394 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC----SSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEE
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCceECCEEEeCCCCCCHHHhCccCCceEEEEee
Confidence 9 999999999999999999999999999999999998521 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+....|| .||+||++|.+|| ++|++.|
T Consensus 395 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~~~~k 473 (479)
T 2imp_A 395 DTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGL-HEYLQTQ 473 (479)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHH-HTTEEEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHH-HHhcCee
Confidence 9999999999999999999999999999999999999999999997665445556 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 474 ~v 475 (479)
T 2imp_A 474 VV 475 (479)
T ss_dssp EE
T ss_pred EE
Confidence 87
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-95 Score=783.30 Aligned_cols=464 Identities=22% Similarity=0.323 Sum_probs=429.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+.+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999984 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++ .+|+..+++.++|++++.+++.... .+.. .......++++|+|||++|+|||||+...++
T Consensus 101 la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPI-LPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBE-ECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcc-cccc--CCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 9999999999999999 6899999999999998877653321 1111 0122356789999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996578888887 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 257 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (500)
T 2j6l_A 257 LMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336 (500)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++|||+++.++++++++|++++++|+++++||++.+ ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 337 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (500)
T 2j6l_A 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD----RPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQ 412 (500)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEEC
T ss_pred cCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeC
Confidence 9999999999999999999999999999999999998531 368999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHH--hhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCce
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIA--AQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a--~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+..... ...|| .||+||++|.+|+ ++|++
T Consensus 413 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~f~~ 491 (500)
T 2j6l_A 413 NEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAW-KQYMR 491 (500)
T ss_dssp CHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGG-GGGEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHH-HHhhc
Confidence 99999999999999999999999999999999 77999999999865322 22334 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 492 ~k~v 495 (500)
T 2j6l_A 492 RSTC 495 (500)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9987
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-95 Score=782.85 Aligned_cols=461 Identities=27% Similarity=0.373 Sum_probs=419.7
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
++.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++. .|+..+++.+++++++.++... ..+.. ...+...+++++|+|||++|+|||||+...
T Consensus 90 ~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999995 6999999999999988765433 11111 012356789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~-~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
++++++||++||+||+|||+.+|+++ .++.++ |.++|+|+|++|+|+|+ .+.++.|++ ++|+|.||||+.+|
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~l----l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g 241 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARI----FEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHH----HHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHH----HHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHH
Confidence 99999999999999999999999999 776665 67799999999999997 578899988 89999999999999
Q ss_pred HHHHHHHhc--cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 282 RMIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 282 ~~v~~~aa~--~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
+.|++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 242 ~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 321 (508)
T 3r64_A 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNI 321 (508)
T ss_dssp HHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhc
Confidence 999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
++|+|.++++++|||+++.++++++++|++++++|+++++||.+ .|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl 394 (508)
T 3r64_A 322 PTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLI 394 (508)
T ss_dssp CBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEE
T ss_pred cCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceE
Confidence 99999999999999999999999999999999999999999972 68999999999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCCCcCcHHHhhc
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+ ....|| .||+||++|.+|| +
T Consensus 395 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l-~ 473 (508)
T 3r64_A 395 SVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAI-E 473 (508)
T ss_dssp EEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHH-H
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHH-H
Confidence 999999999999999999999999999999999999999999999999998644 233345 8999999999999 5
Q ss_pred cCceeeee
Q 009397 515 DPTKLKML 522 (535)
Q Consensus 515 ~~~~~k~~ 522 (535)
+|++.|++
T Consensus 474 ~ft~~k~v 481 (508)
T 3r64_A 474 EFTTDRWI 481 (508)
T ss_dssp HTEEEEEE
T ss_pred HhhceEEE
Confidence 89999997
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-95 Score=778.95 Aligned_cols=443 Identities=24% Similarity=0.384 Sum_probs=418.0
Q ss_pred eEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 009397 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS 144 (535)
Q Consensus 65 ~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~ 144 (535)
+++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|++++++|+||+..++.
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecC
Q 009397 145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (535)
Q Consensus 145 ~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps 224 (535)
+|+..+++.++|++++++++..+..... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 8999999999999999988877644332 23567899999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 225 ~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
+.+|+++.++.+++ .++|+|+|++|+|+|++ +.++ |++ ++|+|+||||+.+|+.|++.+++++||+++||||
T Consensus 160 ~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGG 234 (484)
T 3ros_A 160 HNVPGSAALTAKII----KRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG 234 (484)
T ss_dssp TTCHHHHHHHHHHH----HHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCChHHHHHHHHHH----HHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCC
Confidence 99999998877765 55899999999999976 4566 877 8999999999999999999999999999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 235 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 314 (484)
T 3ros_A 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKE 314 (484)
T ss_dssp CCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
+++++|++++++|+++++||.+.+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 315 rv~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 390 (484)
T 3ros_A 315 KLEAQVKEAIDAGAKVFYQYPEID----SKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGL 390 (484)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCC----CSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCS
T ss_pred HHHHHHHHHHHcCCeEEecCCcCC----CCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCc
Confidence 999999999999999999998532 5799999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.++++++++++++|+|+||++.......|| .||+||++|++|| ++|++.|++
T Consensus 391 ~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft~~K~v 454 (484)
T 3ros_A 391 GSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGL-MAFVNEHLV 454 (484)
T ss_dssp CEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHH-TTTCEEEEE
T ss_pred EEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHH-HHhheeEEE
Confidence 99999999999999999999999999997655555556 8999999999999 689999997
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-94 Score=782.47 Aligned_cols=459 Identities=21% Similarity=0.360 Sum_probs=426.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+++||+|+|+. ++++++++||+| |+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 456899999987 678999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++. .|+..+++.++|++++..+.+.++..+.. .+...+++++|+|||++|+|||||+...+
T Consensus 115 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp HHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 999999999999999995 69999999999999985554554443322 24567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|++ +.++.|++ ++++|+||||+.+|+.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l----~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~ 266 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEV----LEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVR 266 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHH----HHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHH----HHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 9999999999999999999999999877776 556899999999999955 68889987 8999999999999999
Q ss_pred HHHHHhcc------CCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa~~------~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.++++ +||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 267 i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 346 (538)
T 3qan_A 267 LYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAK 346 (538)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHT
T ss_pred HHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHH
Confidence 99999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+|.++++++||++++.++++++++|++++++| ++++||.+.. ..|+|++|||+.+++++|++++||+|||
T Consensus 347 ~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGP 421 (538)
T 3qan_A 347 NLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDS----STGFFIQPTIIADLDPEAVIMQEEIFGP 421 (538)
T ss_dssp TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEEC----SSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred hccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCC----CCCceeCCeeeecCCCCChhhCCCcCCc
Confidence 9999999999999999999999999999999999999 9999998521 2699999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECC-CCcc-ccCCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASN-YMCQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~-~~~~-~~~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ .... ....|| .||+| |++|.+
T Consensus 422 Vl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~ 501 (538)
T 3qan_A 422 VVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPD 501 (538)
T ss_dssp EEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTT
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHH
Confidence 9999999999999999999999999999999999999999999999999995 4332 334455 99999 999999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
|| ++|++.|++
T Consensus 502 gl-~~ft~~k~v 512 (538)
T 3qan_A 502 YL-ALHMQAKTV 512 (538)
T ss_dssp TG-GGGEEEEEE
T ss_pred HH-HHhhCeEEE
Confidence 99 589999997
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-94 Score=776.44 Aligned_cols=458 Identities=27% Similarity=0.445 Sum_probs=425.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
.++||+|+|+.+. ++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999998764 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++. .|+..+++.++|++++.++... +..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 91 a~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (487)
T 2w8n_A 91 ARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYG-DIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRK 166 (487)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCC-EEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-cccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 9999999999999995 7999999999999998877432 222221 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe---CC-ccchhhhhc--cccEEEEeCChHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GF-AETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~---~~-~~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
+++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+ |. .+.++.|++ ++|+|+||||+.+|+
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 167 VGAALAAGCTVVVKPAEDTPFSALALAELA----SQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 999999999999999999999998877764 56899999999999 74 367888888 799999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc-ccC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (535)
.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCc-eeccEEEEcCCCCCcccccccccceee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~-~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
|+|.++++++|||+++.++++++++|++++++|+++++||+.. +.|+ |++|||+.+++++|++++||+||||++
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 397 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAP 397 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEE
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceEE
Confidence 9999999999999999999999999999999999999999742 2588 999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+....|| .||+|+++|.+|| ++|
T Consensus 398 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l-~~f 476 (487)
T 2w8n_A 398 VIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGI-DEY 476 (487)
T ss_dssp EEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGG-GGG
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999998765555556 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 477 ~~~k~v 482 (487)
T 2w8n_A 477 LELKYV 482 (487)
T ss_dssp EEEEEE
T ss_pred cCccEE
Confidence 999987
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-94 Score=773.65 Aligned_cols=462 Identities=27% Similarity=0.396 Sum_probs=424.8
Q ss_pred CCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 009397 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (535)
Q Consensus 61 ~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~ 140 (535)
.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEE
Q 009397 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (535)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV 220 (535)
.+ ..|+...++.+++++....+++......... .+.....+++|+|||++|+|||||+...++++++||++||+||
T Consensus 83 ~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 83 IT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred HH--HHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 44 3799999999999998888877655443321 2345567889999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhccccEEEEeCChHHHHHHHHHHhccCCceeeccC
Q 009397 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (535)
Q Consensus 221 ~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg 300 (535)
+|||+.+|+++..+.++ +.++|+|+|++++++|..+.+..|+.++++|.||||+.+|+.|++.+++++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~----~~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMA----LNTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHH----HTTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ecccccCchHHHHHHhh----hhhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCC
Confidence 99999999998876655 56799999999999998888999988999999999999999999999999999999999
Q ss_pred CcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHH
Q 009397 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (535)
Q Consensus 301 Gk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~ 380 (535)
||||+||++|||++.+++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCC
Q 009397 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (535)
Q Consensus 381 ~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 460 (535)
+++++++++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~---~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 391 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEE---LGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYG 391 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEE---ETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHhhCceeccCCcccc---cCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCC
Confidence 9999999999999999999998532 3578999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCccccC--CCC----CCCCC-CcCcHHHhhccCceeeee--cCCCCCCCc
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC--QVF----KCIFD-EFDSVHVILNDPTKLKML--PHFSVPAIW 531 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~--~~~----~SG~G-~~~g~~gl~~~~~~~k~~--~~~~~~~~~ 531 (535)
|+++|||+|.++++++++++++|+|+||++...... .|+ .||+| +++|.+|+ ++|++.|++ ..-..+.+|
T Consensus 392 L~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~-~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 392 LSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGL-KRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp SEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHH-HTTEEEEEEEEECSSSCCTT
T ss_pred CeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHH-HHhCeEEEEEECCCCCCCCC
Confidence 999999999999999999999999999998655432 234 79998 88999999 589999997 333335678
Q ss_pred ccc
Q 009397 532 WCQ 534 (535)
Q Consensus 532 ~~~ 534 (535)
||.
T Consensus 471 w~d 473 (474)
T 4h7n_A 471 WFD 473 (474)
T ss_dssp SCC
T ss_pred CcC
Confidence 884
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-94 Score=773.50 Aligned_cols=462 Identities=24% Similarity=0.388 Sum_probs=414.9
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++...|+..+++.++++++..+++.... .....+++++|+|||++|+|||||+...++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHH
Confidence 999999999999999966899999999999999887765432 123567899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++.++.+++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.|
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i 234 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIF----DKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKI 234 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHH----HHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC-
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHH----HHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 9999999999999999999999998877775 55899999999999955 78888887 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 235 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp -CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 393 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITY 393 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEec
Confidence 99999999999999999999999999999999999995321 12357999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ .......|| .||+|+++|.+|| ++|++.|
T Consensus 394 ~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l-~~~t~~k 471 (478)
T 3ty7_A 394 NDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGI-EEFLEVK 471 (478)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CC-GGGEEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHH-HHhcCeE
Confidence 999999999999999999999999999999999999999999999 333333345 8999999999999 5899999
Q ss_pred eecC
Q 009397 521 MLPH 524 (535)
Q Consensus 521 ~~~~ 524 (535)
++-.
T Consensus 472 ~v~~ 475 (478)
T 3ty7_A 472 SIAG 475 (478)
T ss_dssp EEET
T ss_pred EEEE
Confidence 9853
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-94 Score=773.88 Aligned_cols=457 Identities=23% Similarity=0.343 Sum_probs=423.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH-HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+.+||+|+|+.+. ++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++|++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45689999999764 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccc--cccceeeeecceEEEEEcCCchhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+|++++++|+||+..++. .|+..+++.++|++++.+++.. +..+...... ....+++++|+|||++|+|||||+..
T Consensus 96 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 999999999999999996 8999999999999998887643 2222211011 23568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|..+.++.|++ ++|+|+||||+.+|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~ 249 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKAL----LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGE 249 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHH----HHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 9999999999999999999999999999887775 5589999999999997677888888 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 250 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 327 (501)
T 1uxt_A 250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 327 (501)
T ss_dssp HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence 9999888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCC-ceeccEEEEcCC---CCCcccccccccce
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPI 438 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g-~~~~Ptvl~~v~---~~~~i~~~E~fgPv 438 (535)
+|.++++++|||+++.++++++++|++++++|+++++||+. .| +|++|||+.+++ ++|++++||+||||
T Consensus 328 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPV 400 (501)
T 1uxt_A 328 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPV 400 (501)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred CccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCce
Confidence 99999999999999999999999999999999999999973 57 899999999999 99999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCC-CccccCCCC----CCCCCCcCcHHHhh
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF-ASNYMCQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~-~~~~~~~~~----~SG~G~~~g~~gl~ 513 (535)
++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++ .......|| .||+||++|.+||
T Consensus 401 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l- 479 (501)
T 1uxt_A 401 ALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAV- 479 (501)
T ss_dssp EEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTH-
T ss_pred EEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHH-
Confidence 9999999999999999999999999999999999999999999999999997 444444556 9999999999999
Q ss_pred ccCceeeee
Q 009397 514 NDPTKLKML 522 (535)
Q Consensus 514 ~~~~~~k~~ 522 (535)
++|++.|++
T Consensus 480 ~~f~~~k~v 488 (501)
T 1uxt_A 480 EAVTAYKTI 488 (501)
T ss_dssp HHHEEEEEE
T ss_pred HHhCceeEE
Confidence 579999998
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-94 Score=772.87 Aligned_cols=460 Identities=26% Similarity=0.390 Sum_probs=412.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++. .|+..+++.++++++..++.. ....+.. ...+...+++++|+|||++|+|||||+...++
T Consensus 86 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 86 IIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELG-GVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCS-CEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhC-Ceecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999996 699999999999999887543 2222211 01235678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~-~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
++++||++||+||+|||+.+|+++ .++.++ |.++|+|+|++|+|+|++ +.++.|++ ++++|.||||+.+|+.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~ 238 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKA----FEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH 238 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHH----HHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHH----HHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHH
Confidence 999999999999999999999999 766555 667999999999999976 58889988 8999999999999999
Q ss_pred HHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCC
Q 009397 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 284 v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (535)
|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 239 i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 318 (485)
T 4dng_A 239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318 (485)
T ss_dssp HHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
|.++++++||++++.++++++++|++++++|+++++||.+ .|+|++|||+.+++++|++++||+||||++|++
T Consensus 319 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~ 391 (485)
T 4dng_A 319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIK 391 (485)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEE
T ss_pred CCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEE
Confidence 9999999999999999999999999999999999999972 689999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ ....|+ .||+||++|.+|+ ++|++
T Consensus 392 ~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l-~~~t~ 470 (485)
T 4dng_A 392 AGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVV-EEFTV 470 (485)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHH-HHHEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHH-HHhhc
Confidence 99999999999999999999999999999999999999999999998644 233345 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 471 ~k~v 474 (485)
T 4dng_A 471 TKWI 474 (485)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9987
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-93 Score=766.22 Aligned_cols=453 Identities=31% Similarity=0.448 Sum_probs=420.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+.+||+|+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++|+++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999997654 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccccc----ccc-eeeeecceEEEEEcCCchhhh
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFH 203 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~----~~~-~~~~~PlGVv~~i~p~n~P~~ 203 (535)
++++++|+||+..++ ..|+..+++.++|++++.+++.... .+.. ..+ ... +++++|+|||++|+|||||+.
T Consensus 83 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 83 GAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 999999999999998 4899999999999999887765432 1111 112 345 889999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~ 280 (535)
..++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.. +.++.|++ ++|+|+||||+.+
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 234 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAF----AEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI 234 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHH----HHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHH----HHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence 99999999999999999999999999999888775 46899999999999975 57888888 7999999999999
Q ss_pred HHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 281 g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 235 g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 235 GERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 999999887 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.+ ++++|||+++.++++++++|++++++|+++++||+. .|+|++|||+.+++++|++++||+||||++
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~ 384 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLP 384 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEE
Confidence 999999 999999999999999999999999999999999973 589999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECC-CCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~-~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +.......|| .||+||++|.+|| ++
T Consensus 385 v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~-~~ 463 (475)
T 1euh_A 385 IIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSI-EA 463 (475)
T ss_dssp EEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHH-HH
T ss_pred EEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHH-HH
Confidence 9999999999999999999999999999999999999999999999999 6544344455 8999999999999 57
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 464 ~~~~k~v 470 (475)
T 1euh_A 464 MTTVKSV 470 (475)
T ss_dssp TEEEEEE
T ss_pred hCCeeEE
Confidence 9999987
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-93 Score=768.52 Aligned_cols=461 Identities=21% Similarity=0.326 Sum_probs=424.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++. +|+..+++.++|++...+.. ..+..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 86 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 86 AHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLM-MGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHH-CEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999984 89999999999987654443 22221110 12345678999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
+++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ ++++|+||||+.+|+.|++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELF----EKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHH----HHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999887775 5699999999999997778888888 7999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccE-EEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~r-v~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++||++++.++++++++|++++++|+++++||.+. ....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 999999999999999999999999999999999999753 12468999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCC--CcCcHHHhhccCce
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFD--EFDSVHVILNDPTK 518 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G--~~~g~~gl~~~~~~ 518 (535)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.... ....|| .||+| |++|.+|+ ++|++
T Consensus 394 ~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~-~~~~~ 472 (486)
T 1t90_A 394 NLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSV-DFYTR 472 (486)
T ss_dssp SHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHH-HHTEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999986432 233456 99999 99999999 57999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 473 ~k~v 476 (486)
T 1t90_A 473 KKVV 476 (486)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9998
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-93 Score=767.79 Aligned_cols=459 Identities=23% Similarity=0.346 Sum_probs=422.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+.+||+|+|+.+ +++++++||+ ||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999864 5789999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++. +|+..+++.++|++++.+++..+...... ..+...+++++|+|||++|+|||||+...+
T Consensus 115 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999995 89999999999999998887664321111 123456889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+ +.++.|++ ++++|+||||+.+|+.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~----~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~ 267 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIF----HEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH----HHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHH----HHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHH
Confidence 99999999999999999999999998877765 56899999999999954 67888988 7999999999999999
Q ss_pred HHHHHh------ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa------~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 268 i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 347 (516)
T 1uzb_A 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAE 347 (516)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHH
Confidence 999998 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+| ++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 348 ~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGP 421 (516)
T 1uzb_A 348 RLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGP 421 (516)
T ss_dssp TCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred hccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCc
Confidence 9999999 99999999999999999999999999999 899999742 13689999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+..... ...|| .||+| +++|.+
T Consensus 422 Vl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~ 501 (516)
T 1uzb_A 422 VLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501 (516)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHH
T ss_pred eEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHH
Confidence 999999999999999999999999999999999999999999999999999865432 23345 89999 579999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
|+ ++|++.|++
T Consensus 502 ~l-~~f~~~k~v 512 (516)
T 1uzb_A 502 YL-RLFLEMKAV 512 (516)
T ss_dssp HH-HTTEEEEEE
T ss_pred HH-HHcCCeeEE
Confidence 99 589999987
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-93 Score=758.64 Aligned_cols=447 Identities=27% Similarity=0.463 Sum_probs=419.5
Q ss_pred CCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 009397 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (535)
Q Consensus 62 ~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ 141 (535)
+...++++||+||+++++++.++.+|+++++++|++|+..|+++|..+|.++|+++++.|++++++|++++++|+||+..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEE
Q 009397 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (535)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~ 221 (535)
+++ .|+..+++.++|+++..+++..+.... ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 85 ~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QAR-AEVTKSAALCDWYAEHGPAMLNPEPTL----VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEECS----SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHhHHHhcCCcccC----CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 995 799999999999999888776554211 134567889999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeecc
Q 009397 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299 (535)
Q Consensus 222 kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~el 299 (535)
|||+.+|+++.++.++ |.++|+|+|++|+|+|+.+.++.|++ ++++|+||||+.+|+.|++.++++++|+++|+
T Consensus 160 Kps~~tp~~~~~l~~~----l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 235 (462)
T 3etf_A 160 KHAPNVTGCAQMIARI----LAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLEL 235 (462)
T ss_dssp ECCTTCHHHHHHHHHH----HHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCCCcHHHHHHHHH----HHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEc
Confidence 9999999999877665 56699999999999997788888887 89999999999999999999999999999999
Q ss_pred CCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHH
Q 009397 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379 (535)
Q Consensus 300 gGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~ 379 (535)
|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++..+
T Consensus 236 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 315 (462)
T 3etf_A 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDL 315 (462)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCC
Q 009397 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459 (535)
Q Consensus 380 ~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 459 (535)
+++++++|++++++|+++++||.+.+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 316 ~~~v~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~ 391 (462)
T 3etf_A 316 RDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEF 391 (462)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcccC----CCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCC
Confidence 99999999999999999999998532 46899999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 460 gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+++|||+|.++++++++++++|+|+||++.......|| .||+|+++|.+|+ ++|++.|++
T Consensus 392 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~-~~~~~~k~v 457 (462)
T 3etf_A 392 GLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGL-HEFCNVQTV 457 (462)
T ss_dssp CSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHH-HTTEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHH-HHHhceeEE
Confidence 9999999999999999999999999999998655555556 8999999999999 589999987
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-91 Score=755.42 Aligned_cols=473 Identities=20% Similarity=0.247 Sum_probs=427.9
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh-
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH- 124 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~- 124 (535)
..+.+||+|+|+.+. +.+.++||+| |+++++++.++.+|+++||++|++||+.|+++|..+|.++|+++++.|+++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 139 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR 139 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 456799999998764 4678899998 899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++|+++.++++......... .......+++|+|||++|+|||||+..
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHH
Confidence 99999999999999999996444999999999999998887654332221 123455667788999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
..+++++|| +||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|++ +.++.|++ ++++|.||||+.+|
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~l----l~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG 291 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRI----LREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTF 291 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHH----HHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHH----HHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999 59999999999999999887776 556899999999999976 57888987 89999999999999
Q ss_pred HHHHHHHhccCCc------eeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHH
Q 009397 282 RMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355 (535)
Q Consensus 282 ~~v~~~aa~~~~p------v~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~ 355 (535)
+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.++||.|++++|+|||+++||+|+++|+++
T Consensus 292 ~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~ 371 (563)
T 4e3x_A 292 KHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEE 371 (563)
T ss_dssp HHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHH
Confidence 9999999999985 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccc
Q 009397 356 VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433 (535)
Q Consensus 356 ~~~l~~G~~-~~~~~~~Gpli~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E 433 (535)
++++++|+| .++++++||++++.++++++++|+++++ +|+++++||... ...|+|++|||+.+++++|++++||
T Consensus 372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eE 447 (563)
T 4e3x_A 372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEE 447 (563)
T ss_dssp HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSC
T ss_pred HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCC
Confidence 999999999 9999999999999999999999999996 899999999742 2479999999999999999999999
Q ss_pred cccceeeeeecCC--HHHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcC--cceEEECCCCccc--cCCCC----CCC
Q 009397 434 AFGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNY--MCQVF----KCI 502 (535)
Q Consensus 434 ~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~asvfs~d~~~~~~~a~~l~--~G~v~IN~~~~~~--~~~~~----~SG 502 (535)
+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+..+.. ..+|| .||
T Consensus 448 iFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG 527 (563)
T 4e3x_A 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527 (563)
T ss_dssp CCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTB
T ss_pred CcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccC
Confidence 9999999999997 79999999 789999999999999999999999975 9999999976443 34566 899
Q ss_pred CC-CcCcHHHhhccCceeeeec-CCCCCCCcccc
Q 009397 503 FD-EFDSVHVILNDPTKLKMLP-HFSVPAIWWCQ 534 (535)
Q Consensus 503 ~G-~~~g~~gl~~~~~~~k~~~-~~~~~~~~~~~ 534 (535)
+| +.+|.++| ..|++.|++- .+..+.-|||-
T Consensus 528 ~g~~~~G~~~l-~~~~~~k~v~~~~~~~~~~~yp 560 (563)
T 4e3x_A 528 TNDKPGGPHYI-LRWTSPQVIKETHKPLGDWRYS 560 (563)
T ss_dssp CCCCTTSTTGG-GGGBCCEEEEEECSCCCCSSCT
T ss_pred CCCccCCHHHH-HHhCceEEEEEeCcCCCcccCC
Confidence 98 89999999 5899999993 35556777773
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-90 Score=740.57 Aligned_cols=451 Identities=20% Similarity=0.314 Sum_probs=413.2
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
++||+|+|+.+. +..++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999864 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||+..++. .|+..+++.++|+++..+++........ ......++++|+|||++|+|||||+...++++
T Consensus 86 ~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (490)
T 3ju8_A 86 RVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPL----ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI 160 (490)
T ss_dssp HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEE----TTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC----CCCeeeEEECCCCEEEEECCCcchHHHHHHHH
Confidence 999999999999995 8999999999999988776544322111 12345677999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|+.+.++.|+. ++|+|.||||+.+|+.|++.
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 236 (490)
T 3ju8_A 161 VPALLAGNCVVFKPSELTPKVAELTLKA----WIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ 236 (490)
T ss_dssp HHHHHHTCEEEEECCTTCHHHHHHHHHH----HHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCcHHHHHHHHH----HHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999877766 55689999999999997788899988 79999999999999999999
Q ss_pred HhccCCce-eeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-HHHHHHHHHHHHhcccCCC-C
Q 009397 288 ASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-P 364 (535)
Q Consensus 288 aa~~~~pv-~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v-~d~f~~~L~~~~~~l~~G~-~ 364 (535)
++++++|+ ++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |
T Consensus 237 aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~ 316 (490)
T 3ju8_A 237 FGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD 316 (490)
T ss_dssp TTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred hhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCC
Confidence 99999998 8999999999999999999999999999999999999999999999996 9999999999999999999 9
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.+.+ ..|+|++|||+. ++++|++++||+||||++|++|
T Consensus 317 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~ 391 (490)
T 3ju8_A 317 EQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI----DGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRY 391 (490)
T ss_dssp CSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCS----TTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEE
T ss_pred CCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCCEEccEEEE-eCCCCccccccccccEEEEEEe
Confidence 99999999999999999999999999999999999998532 479999999999 9999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCcee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~ 519 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+. ...|| .||+ +|+ ++|++.
T Consensus 392 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~------~~~-~~~~~~ 464 (490)
T 3ju8_A 392 SDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGN------HRP-SAYYAA 464 (490)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBS------SCC-EETTHH
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccch------hHH-Hhhhee
Confidence 99999999999999999999999999999999999999999999976432 22223 4554 456 578888
Q ss_pred eee
Q 009397 520 KML 522 (535)
Q Consensus 520 k~~ 522 (535)
|++
T Consensus 465 k~v 467 (490)
T 3ju8_A 465 DYC 467 (490)
T ss_dssp HHH
T ss_pred EEE
Confidence 876
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-90 Score=734.48 Aligned_cols=441 Identities=26% Similarity=0.355 Sum_probs=391.6
Q ss_pred CCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhh
Q 009397 63 ETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142 (535)
Q Consensus 63 ~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~e 142 (535)
-+..+++||.||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||+..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEe
Q 009397 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222 (535)
Q Consensus 143 a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~k 222 (535)
++.+|+..+++.+++++++.+++..+...+..........+++++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 96679999999999999999888765443332222345678899999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 223 ps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
||+.+|+++.++++++.+ + +|+|++|+|+|+.+.++.|++ .+|+|+||||+.+|+.|++.+++++||+++||||
T Consensus 165 ps~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGG 239 (457)
T 3lns_A 165 PSETTPETSAVIEKIIAE----A-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGG 239 (457)
T ss_dssp CCTTCHHHHHHHHHHHHH----H-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCCCChHHHHHHHHHHHH----h-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCC
Confidence 999999999998888765 4 999999999997788889998 9999999999999999999999999999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++|||+++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 5555 999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhc-CCCC
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYG 460 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~g 460 (535)
+++++|+++ ++++++||.. .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++||
T Consensus 315 rv~~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~g 386 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSC
T ss_pred HHHHHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCC
Confidence 999999985 3599999973 236899999999999999999999999999999999999999999999 9999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCcc--ccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASN--YMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~--~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+++|||+|.++++++++++++|+|+||+.... ....|| .||+||++|.+|+ ++|++.|++
T Consensus 387 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~f~~~k~v 453 (457)
T 3lns_A 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSY-LTFTHKKSV 453 (457)
T ss_dssp SEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHH-HHTEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHH-HHhhCeeEE
Confidence 999999999999999999999999999997543 223345 8999999999999 589999987
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-89 Score=742.23 Aligned_cols=463 Identities=16% Similarity=0.209 Sum_probs=409.6
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHH-hHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
+.+||+|+|+.+.+ .+++++||+||+++++++.++ +|+++++++|++| |+.|+++|..+|.++|+++++.|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997654 589999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCC------cccCCCcccccccceeeeecc-eEEEEEcCCch
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP------EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY 200 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~n~ 200 (535)
|++++++|+||+..++. .|+..+++.++|++..+++.... +..+... .......+.++|+ |||++|+||||
T Consensus 86 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~ 163 (534)
T 2y53_A 86 YYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNF 163 (534)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTC
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCch
Confidence 99999999999999995 69999999999999877554321 1111100 0011346788997 99999999999
Q ss_pred hhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCc-cchhhhhccccEEEEeCCh
Q 009397 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSP 278 (535)
Q Consensus 201 P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS~ 278 (535)
|+...++++++||++||+||+|||+.+|+++..+++++ .++| +|+|++|+|+|+. +.++.| ..+|+|+||||+
T Consensus 164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~----~~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~ 238 (534)
T 2y53_A 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV----VDAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSA 238 (534)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH----HHHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCH
Confidence 99999999999999999999999999999999877775 5689 7999999999965 333333 279999999999
Q ss_pred HHHHHHHHHHh--ccCCceeeccCCcceEEEecCC-----CHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHH
Q 009397 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351 (535)
Q Consensus 279 ~~g~~v~~~aa--~~~~pv~~elgGk~p~iV~~da-----Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~ 351 (535)
.+|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++|+|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998875 8999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC--CCCCCCceeccEEEEcCCCC--C
Q 009397 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--M 427 (535)
Q Consensus 352 L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~--~~~~~g~~~~Ptvl~~v~~~--~ 427 (535)
|+++++++++|+|.++++++|||+++.++++++++|+++ .+|+++++||++... +....|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 689999999974321 11236899999999999987 6
Q ss_pred cccccccccceeeeeecC---CH-----HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--CcceEEECCCCcc----
Q 009397 428 KLMQEEAFGPIMPIMKFN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN---- 493 (535)
Q Consensus 428 ~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l--~~G~v~IN~~~~~---- 493 (535)
++++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++..+
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 999999999999999999 99 999999999999999999999999999999999 8999999986421
Q ss_pred -----ccCCCC----CCCCCCc-CcHHHhhccCceeeee
Q 009397 494 -----YMCQVF----KCIFDEF-DSVHVILNDPTKLKML 522 (535)
Q Consensus 494 -----~~~~~~----~SG~G~~-~g~~gl~~~~~~~k~~ 522 (535)
....|+ .||+||+ +|.+|+ ++|++.|++
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l-~~~~~~k~v 515 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRAL-AFYHRRSAI 515 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGG-GGGEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHH-HHHhhhhee
Confidence 122233 8999999 799999 589999997
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-89 Score=727.84 Aligned_cols=424 Identities=26% Similarity=0.404 Sum_probs=388.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHh
Q 009397 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 82 ~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
..+.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.+++++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999999999999999999999999999999999999778999999999999988
Q ss_pred chhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 009397 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (535)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~ 241 (535)
..++..+..............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~- 172 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ- 172 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH-
Confidence 8777665443322222345678999999999999999999999999999999999999999999999999988888654
Q ss_pred HHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHH
Q 009397 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i 320 (535)
+ +|+|++|+|+|+.+.+..|+. .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+
T Consensus 173 ---a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 ---Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp ---H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred ---h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 4 899999999997776777777 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 321 ~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
++|+|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++|||+++.++++++++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 599999999999999999999999998 69999999
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
|.+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++
T Consensus 323 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l 397 (469)
T 3sza_A 323 GTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAET 397 (469)
T ss_dssp CCE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHC
T ss_pred Ccc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhC
Confidence 984 246899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 481 QCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 481 ~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|+|+||+..... ...|| .||+||++|.+|+ ++|++.|++
T Consensus 398 ~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~-~~ft~~K~v 444 (469)
T 3sza_A 398 SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSF-ETFSHRRSC 444 (469)
T ss_dssp CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHH-HHTEEEEEE
T ss_pred CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHH-HHhhCeeEE
Confidence 99999999975432 23345 8999999999999 589999997
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-88 Score=770.22 Aligned_cols=459 Identities=20% Similarity=0.329 Sum_probs=425.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+.++|+|+|+.+ +++++++||+| |+++++++.++.+|+++|+++|++|+..|+.+|+.+|+++|+++++.|+++++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999864 67999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++ ..|+..+++.++|++..++++..+...... .+..+.++++|+|||++|+|||||+...+
T Consensus 609 eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~---~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHA---PGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCC---TTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCccceeEeecCceEEEeCCCccHHHHHH
Confidence 99999999999999999 489999999999999998887654332211 24567889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++..++++ |.++|+|+|++|+|+|++ +.++.|++ +|++|+||||+.+|+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~el----l~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~ 760 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVEL----FREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR 760 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHH----HHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHH----HHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence 9999999999999999999999999887776 556899999999999976 67889988 8999999999999999
Q ss_pred HHHHHh------ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa------~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++
T Consensus 761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~ 840 (1026)
T 4f9i_A 761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840 (1026)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence 999988 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+|.++++++||+|++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCc
Confidence 9999999999999999999999999999999999999 999999732 12499999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+..+.. ..+|| .||+| +.+|++
T Consensus 916 Vl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~ 995 (1026)
T 4f9i_A 916 VLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPD 995 (1026)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTT
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHH
Confidence 999999999999999999999999999999999999999999999999999976543 34566 89999 468999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
+| ..|++.|++
T Consensus 996 ~l-~~f~~~k~v 1006 (1026)
T 4f9i_A 996 YL-LHFMDPRVV 1006 (1026)
T ss_dssp TG-GGGEEEEEE
T ss_pred HH-HHhceEEEE
Confidence 99 589999998
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-87 Score=726.05 Aligned_cols=454 Identities=18% Similarity=0.194 Sum_probs=407.9
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEE-EEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~-~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
...+++||+|+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999987643 89999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchh--hcCCccc---CCCcccccccceeeeecceEEEEEcCCc
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWN 199 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~n 199 (535)
+++|++++++|+||+..++. +|+..+++.++|+++..++ +..+... +......+...+++++|+|||++|+|||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 99999999999999999985 8999999999999998876 3332211 1100012234678999999999999999
Q ss_pred hhhhhhH--HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEE
Q 009397 200 YPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIF 274 (535)
Q Consensus 200 ~P~~~~~--~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f 274 (535)
||+...+ +++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|.+ +.++.|++ +|++|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999855 89999999999999999999999999999999999999999999999999965 78888888 8999999
Q ss_pred eCChHHHHHHHHHHhccC--CceeeccCCcceEEEecCC---CHHHHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHH
Q 009397 275 VGSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALF 348 (535)
Q Consensus 275 ~GS~~~g~~v~~~aa~~~--~pv~~elgGk~p~iV~~da---Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f 348 (535)
|||+.+|+.|++.+++++ ||+++|||||||+||++|| |++.|++.+++++|+|+||.|++++|||||++ +||+|
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f 340 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRF 340 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHH
Confidence 999999999999999999 9999999999999999999 88999999999999999999999999999997 99999
Q ss_pred HHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCC--
Q 009397 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT-- 426 (535)
Q Consensus 349 ~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~-- 426 (535)
+++|++++++++.| +++||++++...++++++++ ++|+++++||. ..|+|++|||+.+++++
T Consensus 341 ~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~-------~~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 341 TTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATE-------SSGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCC-------CCTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCC-------cCCceeccEEEEecCcccc
Confidence 99999999998754 57899988877777777663 37999999997 27999999999988887
Q ss_pred -CcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecC--CHHHHHHHHhhcC--cceEEECCCCccc---cCCC
Q 009397 427 -MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY---MCQV 498 (535)
Q Consensus 427 -~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~--d~~~~~~~a~~l~--~G~v~IN~~~~~~---~~~~ 498 (535)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||++.+.. ...|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 999999999999999999999999999999999999999999 8999999999998 9999999975421 2222
Q ss_pred C-----CCCCCCcC--cHHHhhccCceeeee
Q 009397 499 F-----KCIFDEFD--SVHVILNDPTKLKML 522 (535)
Q Consensus 499 ~-----~SG~G~~~--g~~gl~~~~~~~k~~ 522 (535)
+ .||+||++ |++|| +.|++.|++
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl-~~~~~~k~~ 514 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSI-RRFLRPVAY 514 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGG-GGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCCcHHHH-HHhchhHHh
Confidence 3 79999986 99999 589999997
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=710.08 Aligned_cols=443 Identities=16% Similarity=0.209 Sum_probs=398.0
Q ss_pred CCCCCeEEeecCCCCcEE-EEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 009397 60 PQSETKVQCYEPATMKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 138 (535)
Q Consensus 60 ~~~~~~~~~~~P~tg~~l-~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk 138 (535)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 446778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhhHHHHHHHHHHHHHhchh--hcCCccc---CCCcccccccceeeeecceEEEEEcCCchhhhhh--HHHHHH
Q 009397 139 TMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLA 211 (535)
Q Consensus 139 ~~~ea~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~--~~~i~~ 211 (535)
+..++ .+|+..+++.++|++++.++ ++.+... +..........+++++|+|||++|+|||||+... .+++++
T Consensus 83 ~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 83 PEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99888 58999999999999998875 4432210 1000001113578999999999999999999984 499999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHH
Q 009397 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (535)
Q Consensus 212 AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~a 288 (535)
||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|. .+.++.|++ .||+|+||||+.+|+.|++.+
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999995 467888888 799999999999999999999
Q ss_pred hccC--CceeeccCCcceEEEecCCCHH--HHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHHHHHHHHHHhcccCCC
Q 009397 289 SKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 289 a~~~--~pv~~elgGk~p~iV~~daDl~--~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~ 363 (535)
++++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP-- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC--
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC--
Confidence 9986 9999999999999999999999 99999999999999999999999999999 999999999999999874
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCC---Cccccccccccee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIM 439 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~---~~i~~~E~fgPvl 439 (535)
||++++...++++++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||+
T Consensus 320 --------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl 383 (510)
T 1ez0_A 320 --------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQS 383 (510)
T ss_dssp --------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred --------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeE
Confidence 578888899999999999994 7999999996 2899999999988887 9999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCH--HHHHHHHhhc--CcceEEECCCCcc---ccCCCC-----CCCCCCc-
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASN---YMCQVF-----KCIFDEF- 506 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~--~~~~~~a~~l--~~G~v~IN~~~~~---~~~~~~-----~SG~G~~- 506 (535)
+|++|+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+|+||++... ....++ .||+|+.
T Consensus 384 ~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~ 463 (510)
T 1ez0_A 384 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST 463 (510)
T ss_dssp EEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC
T ss_pred EEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCC
Confidence 9999999999999999999999999999987 7899999999 8999999997542 222334 5888864
Q ss_pred -CcHHHhhccCceeeee
Q 009397 507 -DSVHVILNDPTKLKML 522 (535)
Q Consensus 507 -~g~~gl~~~~~~~k~~ 522 (535)
+|.+|| ++|++.|.+
T Consensus 464 ~~G~~gl-~~~~~~k~~ 479 (510)
T 1ez0_A 464 SVGAEAI-HRWLRPVAY 479 (510)
T ss_dssp SSSGGGG-GGGEEEEEE
T ss_pred CccHHHH-HHhheEEEE
Confidence 799999 578999987
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-81 Score=711.26 Aligned_cols=425 Identities=21% Similarity=0.333 Sum_probs=392.4
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHH
Q 009397 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (535)
Q Consensus 80 v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~ 159 (535)
++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||++.++ .+||..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999 589999999999999
Q ss_pred HhchhhcCCc-ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 160 SEGEKWLKPE-YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 160 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
+..++..... ..+.. .+....++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 9888765432 12221 2456788999999999999999999999999999999999999999999999998887765
Q ss_pred HHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhcc---CCceeeccCCcceEEEecCCCH
Q 009397 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDV 313 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~---~~pv~~elgGk~p~iV~~daDl 313 (535)
.++|+|+|++|+|+|+++.++.|++ +|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||+
T Consensus 700 ----~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 ----HEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp ----HHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred ----HHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 5589999999999997755888988 799999999999999999998864 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc
Q 009397 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393 (535)
Q Consensus 314 ~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~ 393 (535)
+.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.++++++++|++++++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCC--HHHHHHHhhcCCCCcEEEEecCCHH
Q 009397 394 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQH 471 (535)
Q Consensus 394 Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~asvfs~d~~ 471 (535)
| ++ +||... +.|+|++|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+
T Consensus 856 g-~v-~gg~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~ 926 (1001)
T 3haz_A 856 A-RL-HFAGPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926 (1001)
T ss_dssp S-EE-EEECCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHH
T ss_pred C-eE-eccccC-----CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHH
Confidence 8 88 888732 3599999999974 7899999999999999999996 7999999999999999999999999
Q ss_pred HHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-CcCcHHHhhccCceeeee
Q 009397 472 RAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD-EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 472 ~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G-~~~g~~gl~~~~~~~k~~ 522 (535)
+++++++++++|+|+||+..++.. .+|| .||+| +.+|++|| ..|++.|++
T Consensus 927 ~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl-~~ft~~K~v 983 (1001)
T 3haz_A 927 SIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYL-ARFATEQTV 983 (1001)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSG-GGGEEEEEE
T ss_pred HHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHH-HHhceeeEE
Confidence 999999999999999999765442 3456 89999 67899999 589999987
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-77 Score=637.05 Aligned_cols=401 Identities=15% Similarity=0.140 Sum_probs=328.0
Q ss_pred EeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CCC
Q 009397 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GKT 139 (535)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~et-------Gk~ 139 (535)
-|+||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+ ||+
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hh----hhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhc
Q 009397 140 MV----DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFS 215 (535)
Q Consensus 140 ~~----ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~a 215 (535)
+. ++ ..||..+++.++|++++++++.++.. +......+...+++++|+|||++|+||| |+... +++++||++
T Consensus 90 ~~~rl~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaa 165 (463)
T 2h5g_A 90 LLKRLSLS-TSKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIAS 165 (463)
T ss_dssp HHHTTCCC-HHHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHH
T ss_pred hhhhhhhh-HHHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHc
Confidence 87 35 48999999999999988877665431 1110012335678999999999999777 76655 799999999
Q ss_pred CCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCC
Q 009397 216 GNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293 (535)
Q Consensus 216 GN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~ 293 (535)
||+||+|||+.+|+++.++++++.++|.++| |+|++|+|+|..+.++.|+. ++|+|+||||+.+|+.|++.++ +|
T Consensus 166 GN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 166 GNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp TCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999998889 99999999995577888888 7999999999999999999888 89
Q ss_pred ceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccc
Q 009397 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (535)
Q Consensus 294 pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gp 373 (535)
|+++|||||||+||++|||++.|++.+++|+|.| ||.|++++|||||+++|| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hH
Confidence 9999999999999999999999999999999999 999999999999999998 23
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHH
Q 009397 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (535)
Q Consensus 374 li~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 453 (535)
+ +++++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||++
T Consensus 297 ~--------~~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 297 L--------FDQIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp H--------HHHHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred H--------HHHHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 3 334688888999999855431 1234332 578999999999999999999999999999
Q ss_pred hhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC--Cc--CcHHHhhccCceeeee
Q 009397 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD--EF--DSVHVILNDPTKLKML 522 (535)
Q Consensus 454 ~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G--~~--~g~~gl~~~~~~~k~~ 522 (535)
+|+++|||+++|||+|.++++++++++++|+|+||+...+....|| .||+| ++ +|.+|| ++|++.|++
T Consensus 356 aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl-~~ft~~K~v 431 (463)
T 2h5g_A 356 IHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGL-EGLLTTKWL 431 (463)
T ss_dssp HHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCG-GGGEEEEEE
T ss_pred HHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHH-HHhceeEEE
Confidence 9999999999999999999999999999999999997655555556 89999 76 999999 589999998
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-76 Score=628.13 Aligned_cols=413 Identities=17% Similarity=0.179 Sum_probs=366.6
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHH
Q 009397 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 158 (535)
Q Consensus 79 ~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~ 158 (535)
.++.++.+|+++++++|++||..|+++|.++|.++|+++++.|++++++|++++++|+||+..+++..++..+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 45567889999999999999999999999999999999999999999999999999999999988666666666666555
Q ss_pred HHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
++..+. .. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 85 ~~~~~~-~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll 158 (464)
T 3k9d_A 85 IKDMKT-IG--MLKE---DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRII 158 (464)
T ss_dssp HTTCCC-SE--EEEE---ETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hhcccc-cc--eecc---CCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHH
Confidence 443211 00 0000 12346788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccC-CcceEEEecCCCHH
Q 009397 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDVP 314 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg-Gk~p~iV~~daDl~ 314 (535)
.+++.++|+|+|++|+|++. .+.++.|++ ++|+|+||||+. +++.+++++||+ +|+| ||+|+||++|||++
T Consensus 159 ~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 159 SEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHH
Confidence 99999999999999999995 478888988 799999999998 466777899999 7888 99999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH-------hcccCCCCC-CCCCcccccCCHHHHHHHHHH
Q 009397 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 315 ~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~-------~~l~~G~~~-~~~~~~Gpli~~~~~~~l~~~ 386 (535)
.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++. +++++|++. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 466788887 678899999999999999999
Q ss_pred HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHH----HHhhcCCCCcE
Q 009397 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGLG 462 (535)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gL~ 462 (535)
+++++.+|+++++||.. +++++|++. +|+||||++|++|+|+|||| +++|+++|||+
T Consensus 314 ~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~ 374 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHT 374 (464)
T ss_dssp TTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCe
Confidence 99999999999999972 567888875 89999999999999999997 79999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCcc---------ccCCCC---CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASN---------YMCQVF---KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~---------~~~~~~---~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.++++++++++++|+|+||++..+ ....+| .+|.|.++|..|+ .+|++.|++
T Consensus 375 a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~G~~G~g~~~~~~~~-~~~~~~k~v 445 (464)
T 3k9d_A 375 LIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGP-ENLFNIRRI 445 (464)
T ss_dssp EEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBCTGGGTCSCCSBCCG-GGSEEEEEE
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccCcCCCCCcCCCCCCH-HHheEEEEE
Confidence 9999999999999999999999999998653 122223 6899999999999 589999998
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-75 Score=621.02 Aligned_cols=392 Identities=14% Similarity=0.104 Sum_probs=323.3
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhhhHHH-HHHHHHHHHHh
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 161 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~~~Ei~~-~~~~l~~~~~~ 161 (535)
.+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+. .++..+|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999998 7875589988 89999999988
Q ss_pred chhhcCCcccCCCc-c---c-ccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHH
Q 009397 162 GEKWLKPEYRSSGR-S---M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236 (535)
Q Consensus 162 ~~~~l~~~~~~~~~-~---~-~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~ 236 (535)
.+++..+....+.. . . .+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.++++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 88776432211110 0 0 1234678999999999999999 9 8999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 237 IIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 237 ~i~~~l~~----aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
++.++|.+ +|+|+|++|+|+ +. +.++.|+. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 99999999 999999999999 65 67888887 799999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~l~~~ 386 (535)
|||++.|++.+++++|+|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 76531 445
Q ss_pred -HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEE
Q 009397 387 -VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (535)
Q Consensus 387 -i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asv 465 (535)
|++++ ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 310 ~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 372 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 372 (468)
T ss_dssp HHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred cccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 66665 4777875 4 789987 7899999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcCcceEEECCCCccccCCCC---------CCCCCCcCcHHHhhccCceeeee
Q 009397 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF---------KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 466 fs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~---------~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+|.++++++++++++|+|+||++..+....|| .||+|++ |.+|+ ++|++.|++
T Consensus 373 ~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl-~~f~~~K~v 436 (468)
T 1vlu_A 373 VTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGL-DGLVSYQYQ 436 (468)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCS-GGGEEEEEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHH-HHhcceEEE
Confidence 9999999999999999999999997544322222 7999999 99999 589999998
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-74 Score=610.63 Aligned_cols=420 Identities=16% Similarity=0.174 Sum_probs=345.3
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHH-HHH
Q 009397 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 158 (535)
Q Consensus 80 v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l-~~~ 158 (535)
++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++...|+..+.+.+ +|+
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999999755777777766 333
Q ss_pred HHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
.. .+... ..+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++
T Consensus 81 ~~--~~~~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KD--EQTCG--ILEE---DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TT--CCCSE--EC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hh--ccccc--cccC---CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 22 11111 0111 12345678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHH
Q 009397 239 QAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~ 315 (535)
.+++.++|+|+|++|+|++.+ +.++.|++ ++++|+||||+.+ .+.+++++||+++|+|||+|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 999999999999999999954 78899988 8999999999985 4456778999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009397 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (535)
Q Consensus 316 aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga 395 (535)
|++.+++|+|+++||.|++++|||||+++||+|+++|+++ +||+++++++++++++++++.+.|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999885 3899999999999999987767788
Q ss_pred cEeccCCCCCCCCCCCCceeccEE-------EEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCC----CCcEEE
Q 009397 396 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCA 464 (535)
Q Consensus 396 ~~l~gG~~~~~~~~~~g~~~~Ptv-------l~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gL~as 464 (535)
++ +||..... ....|+|++||+ +.+++++|++.+ |+||||++|++|+|+||||+++|++. |||+++
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 87 47653110 013589999997 568899999876 89999999999999999999999985 999999
Q ss_pred EecCCHHHHHH---HHhhcCcceEEECCCCcccc---------CCCCCCCCCCcCcHHHhhc----cCceeeeecCCCCC
Q 009397 465 VFSGSQHRARE---IAAQIQCGVAAINDFASNYM---------CQVFKCIFDEFDSVHVILN----DPTKLKMLPHFSVP 528 (535)
Q Consensus 465 vfs~d~~~~~~---~a~~l~~G~v~IN~~~~~~~---------~~~~~SG~G~~~g~~gl~~----~~~~~k~~~~~~~~ 528 (535)
|||+|.+++++ +++++++|+|+||++..+-. .+.+.-|.|.+||-..-.+ ++.+.|++-..+++
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~ 451 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN 451 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------CCCCCGGGGEEEEEEECCC--
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeecCC
Confidence 99999877777 99999999999999866521 2222678888887766533 78899998776654
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-72 Score=595.37 Aligned_cols=385 Identities=17% Similarity=0.183 Sum_probs=322.1
Q ss_pred HHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hhHHHHHH
Q 009397 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (535)
Q Consensus 85 ~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~~-------~Ei~~~~~ 153 (535)
.+|+++++++|++||..|+.+|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999985 35532 47888999
Q ss_pred HHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 009397 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (535)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~ 233 (535)
.++++++..+.. .. ..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-GE-MSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-TC-EEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-Cc-cCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 999988765431 11 111100012345788999999999999998 8 5888999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCCc--cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 234 YFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 234 ~~~~i~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
+.+++.++|.++|+|+|++|+|+|.+ +.++.|.. ++|+|+||||+.+|+.+++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99999999999999999999999843 36777775 799999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~l~~~ 386 (535)
|||++.|++.+++|+|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. .+++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999987 6532 2455
Q ss_pred HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEe
Q 009397 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (535)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvf 466 (535)
|+++. + | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 i~~a~-~------------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 372 (444)
T 4ghk_A 320 LEAAG-V------------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIV 372 (444)
T ss_dssp HHHTT-C------------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEE
T ss_pred HHhcc-c------------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 55431 1 1 11 35689999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC----CcCcHHHhhccCceeeee
Q 009397 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD----EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 467 s~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G----~~~g~~gl~~~~~~~k~~ 522 (535)
|+|.++++++++++++|+|+||++..+....|+ +||+| |++|++|| ++|++.|++
T Consensus 373 t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl-~~~t~~K~v 435 (444)
T 4ghk_A 373 TEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGL-EGLTSLKYV 435 (444)
T ss_dssp CSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECG-GGGEEEEEE
T ss_pred eCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHH-HhhceEEEE
Confidence 999999999999999999999998665544455 78887 78899999 589999987
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-72 Score=592.46 Aligned_cols=383 Identities=17% Similarity=0.171 Sum_probs=331.8
Q ss_pred HHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhh-------hhhHHHHHH
Q 009397 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDAS-------LGEIMTTCE 153 (535)
Q Consensus 85 ~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~-------~~Ei~~~~~ 153 (535)
-+++++++++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++. ..|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999986 5553 268999999
Q ss_pred HHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 009397 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (535)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~ 233 (535)
.++++++..+. .... .+......+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++.+
T Consensus 93 ~l~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VGEV-IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TTCE-EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cCcc-ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 99999887654 2211 11000001234578899999999999886 46889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCC-c-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 234 YFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 234 ~~~~i~~~l~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
+++++.++|.++|+|+|++|+|+|. . +.++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 9999999999999999999999984 4 45777776 799999999999999999887 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~ 389 (535)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 99999999999999999999999999988652
Q ss_pred HHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCC
Q 009397 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (535)
Q Consensus 390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d 469 (535)
+.||.+. .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 298 --------~~gg~~~------~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 --------VRGCEKT------RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp --------EEECHHH------HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred --------eecChhh------hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 1233210 12 33 885 34678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC----CcCcHHHhhccCceeeee
Q 009397 470 QHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD----EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 470 ~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G----~~~g~~gl~~~~~~~k~~ 522 (535)
.++++++++++++|+|+||+........|+ .||+| +++|++|+ ++|++.|++
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl-~~~~~~k~v 418 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGL-RELTTYKFV 418 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCT-GGGEEEEEE
T ss_pred HHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHH-HHHhceEEE
Confidence 999999999999999999997654444455 89987 57899999 589999997
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.35 Score=49.34 Aligned_cols=256 Identities=20% Similarity=0.212 Sum_probs=140.3
Q ss_pred cccceeeeecceEEEEEcCCc---hhhhhhHHHHHHHHhcCCEEEEecCC--CchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 009397 179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIVIKVSE--NASWSGCFYFRIIQAALAAVGAPENLVD 253 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~n---~P~~~~~~~i~~AL~aGN~VV~kps~--~~~~s~~~~~~~i~~~l~~aG~p~~~v~ 253 (535)
+.....++.|+--|++.+|.- ||- +.+...+||-.||..=|+-++| ........++ +.+.+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 344566889999999999943 543 4455678999999974443333 2211121111 233477753
Q ss_pred EEe-CCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeecc-CCcceEEEe-c-CCCHHHHHHHHHHH
Q 009397 254 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIVC-D-DVDVPHVAQIAVRA 323 (535)
Q Consensus 254 ~v~-~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~el-gGk~p~iV~-~-daDl~~aa~~i~~~ 323 (535)
+.. |..+.-.+|.- .||.|+=.|..=|...=..-.. .|-..+ .|.+=++|. + ++|.+.++..++..
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 233 32333344422 7999999998776543322222 122222 344444443 3 38999988877755
Q ss_pred HHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCC
Q 009397 324 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (535)
Q Consensus 324 ~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~ 403 (535)
+=+. -. .+.++|..+ ++|.+++.+.+.+.-.. +.. .+ .++.+..+
T Consensus 266 AEHd----~~-a~~iLvT~s--~~la~~V~~~i~~~l~~-----------l~r---~~----i~~~sl~~---------- 310 (423)
T 4gic_A 266 AEHD----ED-AQAILISPD--AAHLEAVQASIERLLPG-----------MER---AE----VIRTSLER---------- 310 (423)
T ss_dssp HTTC----TT-CEEEEEESC--HHHHHHHHHHHHHHGGG-----------CTT---HH----HHHHHHHH----------
T ss_pred hccC----CC-CeEEEEeCc--HHHHHHHHHHHHHHHhh-----------Ccc---HH----HHHHHHhc----------
Confidence 4322 22 345566554 44444444444321000 001 11 12222211
Q ss_pred CCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-c
Q 009397 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (535)
Q Consensus 404 ~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~ 482 (535)
+| .++.++|.+||++++|..--= -.-|.++|. +.+..+++ +
T Consensus 311 -------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nA 352 (423)
T 4gic_A 311 -------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESP---EVLVESIRNA 352 (423)
T ss_dssp -------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCH---HHHGGGCCCC
T ss_pred -------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCH---HHHHhhCcEe
Confidence 11 245678999999999994222 357788886 45777775 9
Q ss_pred ceEEECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 483 GVAAINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 483 G~v~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|.|++..+..- |...+ | .+|+.||.+.-+.. +|.+..++
T Consensus 353 GaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~-~F~K~~s~ 399 (423)
T 4gic_A 353 GAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVY-DFQKRSSL 399 (423)
T ss_dssp SEEEEC----------------CCCCTTGGGTCCCCCGG-GGEEEEEE
T ss_pred ceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHH-HeeeeeeE
Confidence 99999875321 22111 2 89999999998884 56655554
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.78 Score=46.89 Aligned_cols=258 Identities=17% Similarity=0.170 Sum_probs=145.1
Q ss_pred cccceeeeecceEEEEEcCC-chhh-hhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe
Q 009397 179 HKKAKVEFHPLGVVGAIVSW-NYPF-HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~-n~P~-~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~ 256 (535)
+-....++.|+--|++.+|. .+|+ .+.+...+||-.+|+.=|+-++|-...... ++ +.+.+|..+ +..
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~-----AA~l~Gv~e----Iy~ 183 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI-LY-----AAQLCGVQD----VFN 183 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECSSCCHHH-HH-----HHHHTTCCE----EEE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCCCCCHHH-HH-----HHHHcCCCE----Eee
Confidence 33455678899999999995 3333 345566789999999877665553222221 11 223477753 222
Q ss_pred -CCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeecc-CCcceEEEe--cCCCHHHHHHHHHHHHHH
Q 009397 257 -GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIVC--DDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 257 -~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~el-gGk~p~iV~--~daDl~~aa~~i~~~~f~ 326 (535)
|..+.-.+|.- .||+|+=.|..=|...=..-....+ .|-+.+ .|.+=++|. +++|.+.++..++-.+=+
T Consensus 184 vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 184 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 33333334422 7999998888765432222211111 122222 344444443 348999988877654422
Q ss_pred hcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC
Q 009397 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~ 406 (535)
. -. .+.++|..+ ++|.+++.+.+.+.-.. +.. .+.++.++
T Consensus 263 d----~~-a~aiLvT~s--~~la~~V~~ev~~ql~~-----------lpr-------~~ia~~sl--------------- 302 (434)
T 1kae_A 263 G----PD-SQVILLTPA--ADMARRVAEAVERQLAE-----------LPR-------AETARQAL--------------- 302 (434)
T ss_dssp C----TT-CEEEEEESC--HHHHHHHHHHHHHHHTT-----------CTT-------HHHHHHHH---------------
T ss_pred C----CC-CcEEEEECC--HHHHHHHHHHHHHHHHh-----------CCh-------HHHHHHHH---------------
Confidence 2 22 345555554 34444444443321000 000 11222221
Q ss_pred CCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-cceE
Q 009397 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVA 485 (535)
Q Consensus 407 ~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~G~v 485 (535)
..- .|+.++|.+||++++|..--= -.-|.++|. ..+..+++ +|.|
T Consensus 303 -----------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~nAGaI 348 (434)
T 1kae_A 303 -----------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITSAGSV 348 (434)
T ss_dssp -----------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCSCSEE
T ss_pred -----------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCcccch
Confidence 111 356779999999999985222 467888887 46677775 9999
Q ss_pred EECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 486 AINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 486 ~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++..+..- |...+ | .+|+.||.|.-+.. +|.+..++
T Consensus 349 FlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~-~F~K~~s~ 392 (434)
T 1kae_A 349 FLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLA-DFQKRMTV 392 (434)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGG-GGEEEEEE
T ss_pred hcCCCCchhhcccccCCCcccCCCCceeccCCCcHH-hccceeeE
Confidence 99976321 22221 2 89999999998884 56655544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 535 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-95 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-95 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-94 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-81 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-72 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-68 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-63 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-57 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 9e-34 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-28 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 6e-22 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 297 bits (761), Expect = 2e-95
Identities = 122/447 (27%), Positives = 204/447 (45%), Gaps = 19/447 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
I+I + S K + PAT + L + +VD+ V AR+A ++ W
Sbjct: 16 IFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDA 75
Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
+R + L L I + L+ + + + GK +A L ++ + + + +K
Sbjct: 76 SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG 135
Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
G + P+GV G I+ WN+P + A+ GN +V+K +E
Sbjct: 136 RTIPMDGNFFTY----TRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 191
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMI 284
+ +I+ A G P +V+++ G+ G A+ S VDK+ F GS VG++I
Sbjct: 192 PLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 247
Query: 285 MRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
A K L V+LELGGK IV D D+ + + A + GQ C A R +V
Sbjct: 248 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 307
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
IY FV + + K G PL G E EK+ +L+ +GA++ G
Sbjct: 308 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG- 366
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
++G + PTV +V M++ +EE FGP+ IMKF + ++V+K AN++ YGL
Sbjct: 367 PWGNKGY---FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 423
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDF 490
+F+ +A +++ +Q G +N +
Sbjct: 424 GIFTNDIDKAITVSSALQSGTVWVNCY 450
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 296 bits (758), Expect = 5e-95
Identities = 125/426 (29%), Positives = 197/426 (46%), Gaps = 13/426 (3%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+EPAT + L EVD+ V A+ A W+K + +R + + + I E ++ I
Sbjct: 41 FEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNI 100
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
++ + GKT+ E + + + A P
Sbjct: 101 AKLEVINNGKTI-----TEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREP 155
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGV I++WNYPF A+ GN +V K S +G I A G P
Sbjct: 156 LGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----GVP 211
Query: 249 ENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
LV+V+ G AETG L V K+ F GS G+ +M ++KT+ VTLELGGK +
Sbjct: 212 VGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLL 271
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
+ D ++ + + A+ A + GQ C R +V R+I F+ +V K K++ G PL
Sbjct: 272 IFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVN 424
+ MG L +K+ V A +GA +L G S+ + + P V+ N
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA ++ G
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 485 AAINDF 490
IN +
Sbjct: 452 CYINTY 457
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 293 bits (752), Expect = 3e-94
Identities = 127/447 (28%), Positives = 199/447 (44%), Gaps = 19/447 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
I+I S P+T + + + +VD+ V AR A ++ W +
Sbjct: 16 IFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDA 75
Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
R + L L I + + + + D GK V + L ++ + + + +K+
Sbjct: 76 SHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHG 135
Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
G + P+GV G I+ WN+P + A+ +GN +V+KV+E
Sbjct: 136 KTIPIDGDFFSY----TRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 191
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMI 284
+ + +I+ A G P +V+++ GF G A+ S VDK+ F GS +GR+I
Sbjct: 192 PLTALYVANLIKEA----GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 247
Query: 285 MRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
A S L VTLELGGK I+ D D+ + A A + GQ R +V D
Sbjct: 248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 307
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
IY FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
G + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL
Sbjct: 368 -AADRGY---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 423
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDF 490
AVF+ +A ++ +Q G +N +
Sbjct: 424 AVFTKDLDKANYLSQALQAGTVWVNCY 450
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 260 bits (666), Expect = 1e-81
Identities = 115/443 (25%), Positives = 195/443 (44%), Gaps = 15/443 (3%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+ I + + E Y PAT L S +VD V A A W +++ K R
Sbjct: 5 LLINGELVSGEGEK-QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 63
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
+ L L I E+ ++ E+ SR+ GK + A EI + +
Sbjct: 64 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF---FAGAARCLNG 120
Query: 171 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 230
++G + + + PLGVV +I WNYP + A+ +GN +V+K SE +
Sbjct: 121 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 180
Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN 287
+ + P +V+++ G G+ L V + GS G I+ +
Sbjct: 181 ALKLAELAKDIF-----PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 235
Query: 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 347
+ ++ +ELGGK IV DD D+ V + ++GQ+C A R Y + IY
Sbjct: 236 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295
Query: 348 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407
V ++ V ++ +G P ++G L L H E++ V +A G + G
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355
Query: 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467
G Y+ PT++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL +V++
Sbjct: 356 NGY---YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWT 412
Query: 468 GSQHRAREIAAQIQCGVAAINDF 490
RA ++A++Q G +N
Sbjct: 413 KDVGRAHRVSARLQYGCTWVNTH 435
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 234 bits (598), Expect = 4e-72
Identities = 111/407 (27%), Positives = 177/407 (43%), Gaps = 15/407 (3%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
+ + V +AR+A S + R Q L L + I E+ + I + D GK + E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
+ E++ + E W + E + R + PLGVV I +WNYPF+
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 267
PM+ AV +GN +++K SE + +I + V G ET E L
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIP----QYMDQNLYLVVKGGVPETTELLKE 177
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
D I++ GS VG+++M A+K LTPVTLELGGK V D D+ + +
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
SGQ C + I V ++ K +K G D G + H ++++ L+
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
++ + S Y PT++V+V+ +MQEE FGP+MPI+ +
Sbjct: 297 DNQKVAHGGTWDQSSR----------YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSL 346
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 494
EE ++ N L VFS ++ +++ A+ G ND +
Sbjct: 347 EEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHI 393
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 226 bits (577), Expect = 1e-68
Identities = 126/437 (28%), Positives = 196/437 (44%), Gaps = 18/437 (4%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116
G SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L
Sbjct: 10 GEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHK 69
Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT-CEKITWLLSEGEKWLKPEYRSSGR 175
+ ++ +E I I S++ K A + T + E S
Sbjct: 70 VADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEA 129
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ K A V P+G+V AI +NYP + + + A+ +GN I K S SG
Sbjct: 130 ASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLA 189
Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTL 292
A G P + + ITG +E G+ +V V+ I F GS G+G I + A +
Sbjct: 190 EAFAEA----GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--M 243
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++
Sbjct: 244 RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKI 303
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ V +++ G P K + V ++ + A EG
Sbjct: 304 REKVLALTIGNPEDDADITP-----LIDTKSADYVEGLINDANDKGATALTEIKREGN-- 356
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ R
Sbjct: 357 -LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPR 415
Query: 473 AREIAAQIQCGVAAIND 489
A IA Q++ G IN+
Sbjct: 416 AFGIAEQLEVGTVHINN 432
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 213 bits (543), Expect = 2e-63
Identities = 101/435 (23%), Positives = 167/435 (38%), Gaps = 24/435 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
A + +G +AE + + A KA K W + R + L + + +
Sbjct: 59 SAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEA 118
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL- 189
+ GK V+ E I ++ L+ Y + + F+
Sbjct: 119 TLVYEVGKNWVE----ASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPL 174
Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
G I WN+P ++ V GN ++ K +E+A G F I A G P
Sbjct: 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA----GFPP 230
Query: 250 NLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA------SKTLTPVTLELG 300
+V+ + G E G LV + I F GS VG I A +E G
Sbjct: 231 GVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETG 290
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GK+A IV + D A+ V +A GQ C+ A R + + Y + +V K + +S
Sbjct: 291 GKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
GP D+G + E K+ + + ++G +L EG + PTV
Sbjct: 351 VGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--GEGY---FIAPTVF 404
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
V ++ QEE FGP++ +++ E +++AND+ YGL V+S + +
Sbjct: 405 TEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREF 464
Query: 481 QCGVAAINDFASNYM 495
G N + +
Sbjct: 465 HVGNLYFNRKITGAL 479
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 197 bits (501), Expect = 2e-57
Identities = 98/437 (22%), Positives = 167/437 (38%), Gaps = 12/437 (2%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLR 115
G S +++ P + + + SR EV+ + K + +R LR
Sbjct: 23 GEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLR 82
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
I + ++ E+ + GK A L +
Sbjct: 83 KAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTY 142
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + V PLGVV AI +NYP + N + + GN +V+K S +
Sbjct: 143 DTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 202
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ + A G P + + ++ + E +V+ V + F GS VG +++ +
Sbjct: 203 KALLDA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 256
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGG D IV +D D+ A R +GQ C + R +Y V +VA
Sbjct: 257 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 316
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
K + S+ G P D+G L +++ + DA++KG +LA G + Q
Sbjct: 317 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYV---Q 373
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
+ M L + E F P+ ++ ++ ++LAN YGL AVF +
Sbjct: 374 PTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 433
Query: 474 REIAAQIQCGVAAINDF 490
R ++ G IND
Sbjct: 434 RRAVRLLEVGAIYINDM 450
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 130 bits (327), Expect = 9e-34
Identities = 55/410 (13%), Positives = 131/410 (31%), Gaps = 53/410 (12%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT----MVD 142
E+ E+ + R+A V ++ +++ + ++ + + + E ++ I E + D K + +
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 143 ASLGEIMTTCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 199
+ + + ++I ++ E + P + ++ + + + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE 121
Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
+ + A+ SGN I+++ +A S I+ AL PE+ V+ I
Sbjct: 122 SRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 181
Query: 260 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
+ + + + + + P G ++ T LE G + I D+ A
Sbjct: 182 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVP 241
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
+ A C AE+ VH I F+ + + ++
Sbjct: 242 VIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR--------------- 286
Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439
+ V V T E I+
Sbjct: 287 -------------------------------GCEKTREIVPDVVPATEDDWPTEYLDLII 315
Query: 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
I +E ++ G ++ + + A++ ++I +N
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNA 365
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 116 bits (290), Expect = 2e-28
Identities = 50/439 (11%), Positives = 110/439 (25%), Gaps = 15/439 (3%)
Query: 62 SETKVQCYEPATMKYLGY-FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
++ T + L FP + EV++ A K + + + + +R LR +
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGR 175
+ + I + +T V + GEI T ++ + + +
Sbjct: 61 LEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRA 119
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + + LG V + N+P A G + V + + G
Sbjct: 120 PLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQI 179
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPV 295
A + V G + A L
Sbjct: 180 VAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 239
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
E + + + + +A L +F +
Sbjct: 240 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPET 299
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
+ L + L + Q+ V +
Sbjct: 300 QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAES----PCVASA 355
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRA 473
+EE FGP I+ +++ L+ L + + + +
Sbjct: 356 LFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQV 415
Query: 474 REIAAQIQ--CGVAAINDF 490
++ +++ G N +
Sbjct: 416 SQLIPRLEEIAGRLVFNGW 434
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 96.1 bits (238), Expect = 6e-22
Identities = 49/415 (11%), Positives = 118/415 (28%), Gaps = 45/415 (10%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD----TGKTMV 141
+ + ARKA + S + R L + + + I E + D +
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 142 DASLGEI-MTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
D+ L + + +K +L + + P + + + V +V
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122
Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG----CFYFRIIQAALAAVGAPENLVD 253
+ I N ++ SGN ++K + + + I + G P V
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182
Query: 254 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313
+I + + L + V + + PV G + + +D D+
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK-IPVLGHADGICSIYLDEDADL 241
Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373
+I++ A E ++ + + +
Sbjct: 242 IKAKRISLDAKTNYPAGCN-AMETLLINPKFSKWW---------------EVLENLTLEG 285
Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+ ++ L+ D L++ ++ + TV + + +E
Sbjct: 286 GVTIHATKDLKTAYFDKLNELGKL-------------TEAIQCKTVDAD---EEQDFDKE 329
Query: 434 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
+ + E ++ N A+ + ++ A + + N
Sbjct: 330 FLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN 384
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 535 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.28 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.6e-96 Score=792.26 Aligned_cols=462 Identities=26% Similarity=0.410 Sum_probs=431.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|++.||++|++||+ .|+++|.++|.++|+++++.|++|
T Consensus 13 ~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~ 92 (494)
T d1bxsa_ 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhC
Confidence 34799999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++++++..++.... ..+.. .+...+++++|+|||++|+|||||+..
T Consensus 93 ~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~ 168 (494)
T d1bxsa_ 93 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR-TIPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEE-EECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcce-eecCC---CCceeEEEEccEEEEEEEeCccchhHH
Confidence 99999999999999999987789999999999999887765332 22221 245678899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
+++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|++ +.++.|++ +|++|.||||+.+|
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~----~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g 244 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI----KEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 244 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHH----HHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHH
Confidence 9999999999999999999999999999887775 45899999999999975 67888987 89999999999999
Q ss_pred HHHHHHHhc-cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa~-~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.+++ ++||+++|||||||+||++|||++.+++.+++|+|.++||.|++++|||||+++||+|+++|++++++++
T Consensus 245 ~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~ 324 (494)
T d1bxsa_ 245 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 324 (494)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhee
Confidence 999998885 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++|||++++++++++++|++|+++||++++||.+.. ..|+|++|||+.+++++|++++||+||||++
T Consensus 325 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~ 400 (494)
T d1bxsa_ 325 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG----NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQ 400 (494)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEEC----SSSCEECCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred eeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccC----CCceeEcCEEEeCCCCCcHHHhccccCceEE
Confidence 999999999999999999999999999999999999999998543 5789999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+....|+ .||+||++|.+|| ++|
T Consensus 401 v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~-~~f 479 (494)
T d1bxsa_ 401 IMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGF-HEY 479 (494)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHH-HTT
T ss_pred EEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999998766555556 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 480 t~~k~i 485 (494)
T d1bxsa_ 480 TEVKTV 485 (494)
T ss_dssp EEEEEE
T ss_pred cceEEE
Confidence 999997
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1e-95 Score=785.71 Aligned_cols=464 Identities=27% Similarity=0.396 Sum_probs=432.5
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHH
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYII 122 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~ 122 (535)
+..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|+++++.+|.++|+++++.|+
T Consensus 11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~ 90 (494)
T d1o04a_ 11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 4455899999999999999999999999999999999999999999999999985 6999999999999999999999
Q ss_pred HhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhh
Q 009397 123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202 (535)
Q Consensus 123 ~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~ 202 (535)
+|+++|++++++|+||+..++...|+..+++.++|+++..++.... ..+.. .....+++++|+|||++|+|||||+
T Consensus 91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~ 166 (494)
T d1o04a_ 91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK-TIPID---GDFFSYTRHEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEE-EECCS---SSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCc-eeccC---CCceeEEEEecccEEEEECCcccHH
Confidence 9999999999999999999997789999999999999988775432 22221 2356788999999999999999999
Q ss_pred hhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChH
Q 009397 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 203 ~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~ 279 (535)
...++++++||++||+||+|||+.+|.++.++.+++ .++|+|+|++|+|+|++ +.++.|+. ++++|.||||++
T Consensus 167 ~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~----~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~ 242 (494)
T d1o04a_ 167 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI----KEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTE 242 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHH----HHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHH
Confidence 999999999999999999999999999998877775 55899999999999975 67888988 899999999999
Q ss_pred HHHHHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc
Q 009397 280 VGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (535)
Q Consensus 280 ~g~~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~ 358 (535)
+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||+++||+|++.|.+++++
T Consensus 243 ~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~ 322 (494)
T d1o04a_ 243 IGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS 322 (494)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhh
Confidence 9999998775 789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccce
Q 009397 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (535)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPv 438 (535)
+++|+|.++++++|||+++.++++++++|++|+++|+++++||... .+.|+|++|||+.+++++|++++||+||||
T Consensus 323 ~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPv 398 (494)
T d1o04a_ 323 RVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 398 (494)
T ss_dssp CCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred eeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCceEcCEEEeCCCCCCHHHhccccCce
Confidence 9999999999999999999999999999999999999999999753 257899999999999999999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhc
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++..+....|| .||+|+++|.+|| +
T Consensus 399 l~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~-~ 477 (494)
T d1o04a_ 399 MQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGL-Q 477 (494)
T ss_dssp EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGG-G
T ss_pred EEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHH-H
Confidence 9999999999999999999999999999999999999999999999999998776555566 8999999999999 5
Q ss_pred cCceeeee
Q 009397 515 DPTKLKML 522 (535)
Q Consensus 515 ~~~~~k~~ 522 (535)
+|++.|++
T Consensus 478 ~ft~~k~v 485 (494)
T d1o04a_ 478 AYTEVKTV 485 (494)
T ss_dssp GGEEEEEE
T ss_pred HhcCeEEE
Confidence 89999987
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.6e-95 Score=784.96 Aligned_cols=471 Identities=28% Similarity=0.429 Sum_probs=438.0
Q ss_pred CCCCCCCcccccCCcccCCCCCCeE-EeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHH
Q 009397 42 GNQTPDNSFIYIPPRGRTPQSETKV-QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120 (535)
Q Consensus 42 ~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~ 120 (535)
..-.+....+||+|+|+.+.++.++ +++||+||+++++++.++.+|+++||++|++||+.|+++|..+|.++|+++++.
T Consensus 13 ~~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~ 92 (503)
T d1a4sa_ 13 GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARI 92 (503)
T ss_dssp TTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 3444455568999999999877766 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCch
Q 009397 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200 (535)
Q Consensus 121 l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~ 200 (535)
|++|+++|++++++|+|||+.++. +|+..+++.++|++...++........ ..+...+++++|+|||++|+||||
T Consensus 93 L~~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~Nf 167 (503)
T d1a4sa_ 93 IRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQL----PGGAFAYTRREPLGVCAGILAWNY 167 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEEC----GGGCEEEEEEEECSEEEEECCSSS
T ss_pred HHHhHHHHHHHHHHhhhhcchhhh-hhhhhhhhccccccccccccccccccc----CCCcccccccccceeeecccCCCC
Confidence 999999999999999999999994 899999999999998887654432211 134567899999999999999999
Q ss_pred hhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCCh
Q 009397 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSP 278 (535)
Q Consensus 201 P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~ 278 (535)
|+...++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ +|++|+||||+
T Consensus 168 P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~----~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~ 243 (503)
T d1a4sa_ 168 PFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIF----HEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCH
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999887775 4589999999999998899999998 89999999999
Q ss_pred HHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc
Q 009397 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (535)
Q Consensus 279 ~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~ 358 (535)
.+|++|++.+++++||+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|++++.+++++
T Consensus 244 ~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~ 323 (503)
T d1a4sa_ 244 PTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKA 323 (503)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC--CCCCCCceeccEEEEcCCCCCccccccccc
Q 009397 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436 (535)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~--~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fg 436 (535)
+++|+|.++.+++||++++.+++++++++++++++||++++||..... +....|+|++|||+.+++++|++++||+||
T Consensus 324 ~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~Fg 403 (503)
T d1a4sa_ 324 IVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFG 403 (503)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCS
T ss_pred EeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccC
Confidence 999999999999999999999999999999999999999999986542 334679999999999999999999999999
Q ss_pred ceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHh
Q 009397 437 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVI 512 (535)
Q Consensus 437 Pvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl 512 (535)
||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||++..+....|| .||+||++|.+||
T Consensus 404 Pvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l 483 (503)
T d1a4sa_ 404 PVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATV 483 (503)
T ss_dssp SEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGG
T ss_pred ceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHH
Confidence 999999999999999999999999999999999999999999999999999998776665566 8999999999999
Q ss_pred hccCceeeee
Q 009397 513 LNDPTKLKML 522 (535)
Q Consensus 513 ~~~~~~~k~~ 522 (535)
++|++.|++
T Consensus 484 -~~~t~~k~v 492 (503)
T d1a4sa_ 484 -DYYSQLKTV 492 (503)
T ss_dssp -GGSEEEEEE
T ss_pred -HHhhCeEEE
Confidence 689999987
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-93 Score=765.81 Aligned_cols=461 Identities=25% Similarity=0.386 Sum_probs=418.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+++||+|+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus 3 ~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el 81 (474)
T d1wnda_ 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF 81 (474)
T ss_dssp CCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 579999999977 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||++.++...++....+..++++......... ..+....+...+++++|+|||++|+|||||+...+++
T Consensus 82 a~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 82 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL---AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE---CBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCChhHhhhccccccccccccccccccccccc---ccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999996556666666666655543322111 1111123456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++.+++++++ .++|+|++|+|+|++ +.++.|++ +|++|.||||+++|+.|+
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~-----~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~ 233 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAK-----DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 233 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHT-----TTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHH-----HhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHH
Confidence 9999999999999999999999998887653 469999999999975 67899988 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++|+|.++||.|++++|+|||+++||+|++.|+++++++++|++.
T Consensus 234 ~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~ 313 (474)
T d1wnda_ 234 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPD 313 (474)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTT
T ss_pred HhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++||+++..+.+++++++++++++|++.+.+|.... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~---~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~ 390 (474)
T d1wnda_ 314 DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKR---KGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 390 (474)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBC---SSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCCceecccccccccchHHHHHHHHHHCCCeEEEeCCccc---CCCceEEeeeEeecccccccceeecccCCeEEEEEeC
Confidence 9999999999999999999999999999996554444222 3578999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeee
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
|.||||+++|+++|||+++|||+|.+++++++.++++|+|+||++..+....|+ .||+||++|.+|| ++|++.|+
T Consensus 391 ~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl-~~~t~~k~ 469 (474)
T d1wnda_ 391 NEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGL-EDYTVVRH 469 (474)
T ss_dssp CHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHH-HTTEEEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHH-HHcCCEEE
Confidence 999999999999999999999999999999999999999999998766555556 8999999999999 58999998
Q ss_pred e
Q 009397 522 L 522 (535)
Q Consensus 522 ~ 522 (535)
+
T Consensus 470 v 470 (474)
T d1wnda_ 470 V 470 (474)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.2e-90 Score=749.86 Aligned_cols=461 Identities=22% Similarity=0.339 Sum_probs=419.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
..+++||+|+|+.+ ++.++++||. ||+++++++.++.+|+++||++|++||+.|+++|.++|.++|+++++.|++|+
T Consensus 36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~ 113 (516)
T d1uzba_ 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35779999999975 4678999995 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||++.++ ..|+..+++.++++++...+...+...... .......+.++|+|||++|+|||||+..+
T Consensus 114 ~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~ 190 (516)
T d1uzba_ 114 RELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIF 190 (516)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHhCCCcccc-chhHHHHHHHHHHHHHHHHhhhhccccccc--ccccceeEEeeccCccccccccccccccc
Confidence 999999999999999998 589999999999999887776544322221 23456678899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|.+ +.++.|++ +|++|.||||..+|+
T Consensus 191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~----~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~ 266 (516)
T d1uzba_ 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEI----FHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGL 266 (516)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH----HHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred cccccchhhhcccccccccchhHHHHHHHHHH----HHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHH
Confidence 99999999999999999999999999877766 556899999999999975 67899988 899999999999999
Q ss_pred HHHHHHh------ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH
Q 009397 283 MIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (535)
Q Consensus 283 ~v~~~aa------~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~ 356 (535)
.|++.++ +++||+++|||||||+||++|||++.+++.+++|+|.++||.|++++|+|||+++||+|++++.+++
T Consensus 267 ~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~ 346 (516)
T d1uzba_ 267 KIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRA 346 (516)
T ss_dssp HHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHH
Confidence 9999887 6789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccc
Q 009397 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436 (535)
Q Consensus 357 ~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fg 436 (535)
+++++| |.++++++|||++..++++++++|++|+++|+++ +||.+. ...|+|++|||+.+++++|++++||+||
T Consensus 347 ~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FG 420 (516)
T d1uzba_ 347 ERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFG 420 (516)
T ss_dssp TTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCS
T ss_pred HhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcC----CCCCceECCEEEecCCCCchhhcCCCcC
Confidence 999999 5678899999999999999999999999999766 455543 2468999999999999999999999999
Q ss_pred ceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCCCcCc-H
Q 009397 437 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFDEFDS-V 509 (535)
Q Consensus 437 Pvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G~~~g-~ 509 (535)
||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||++..... ..|| .||+|+++| .
T Consensus 421 Pvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~ 500 (516)
T d1uzba_ 421 PVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGAL 500 (516)
T ss_dssp SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSH
T ss_pred ceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchH
Confidence 99999999999999999999999999999999999999999999999999999755433 3345 899999865 7
Q ss_pred HHhhccCceeeeec
Q 009397 510 HVILNDPTKLKMLP 523 (535)
Q Consensus 510 ~gl~~~~~~~k~~~ 523 (535)
+|| ++|++.|++.
T Consensus 501 ~~l-~~~~~~k~v~ 513 (516)
T d1uzba_ 501 DYL-RLFLEMKAVA 513 (516)
T ss_dssp HHH-HTTEEEEEEE
T ss_pred HHH-HHhCCeeeEE
Confidence 898 5899999984
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.2e-87 Score=724.17 Aligned_cols=473 Identities=22% Similarity=0.336 Sum_probs=427.2
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH-HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
++.+++||+|+|+. ++++++++||+||+.+++++.++.+|+++|+++|++|+. .|+++|..+|+++|+++++.|+++
T Consensus 14 ~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~ 91 (499)
T d1ky8a_ 14 VPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 91 (499)
T ss_dssp EEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 34588999999985 468999999999999999999999999999999988877 799999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCC-CcccccccceeeeecceEEEEEcCCchhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~ 203 (535)
+++|++++++|+|||..++ .+|+..+++.++|++...++......... .........+++|+|+|||++|+|||||+.
T Consensus 92 ~~~la~~~~~etGk~~~~a-~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~ 170 (499)
T d1ky8a_ 92 LDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170 (499)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccch
Confidence 9999999999999999998 58999999999999988877544322211 111234567899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.+++++++||++||+||+|||+.+|.++.++.+++ .++|+|+++++++.+..+.+..|++ .++.+.||||..++
T Consensus 171 ~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~----~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g 246 (499)
T d1ky8a_ 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKAL----LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVG 246 (499)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHH
T ss_pred hhhhcchhhhcccccccccccccchhhhhhhcccc----ccccccceeeecccCChHHHHHHhhccceeEEEeecccccc
Confidence 99999999999999999999999999998777664 5589999999999998888888887 99999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.+++.++ .+|+++|+|||||+||++|||++.|++.+++++|+++||.|++++|+|||++++|+|+++|+++++++++
T Consensus 247 ~~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~ 324 (499)
T d1ky8a_ 247 ERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 324 (499)
T ss_dssp HHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred eEEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCcc
Confidence 99998765 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEE---cCCCCCcccccccccce
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV---NVNHTMKLMQEEAFGPI 438 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~---~v~~~~~i~~~E~fgPv 438 (535)
|+|.++++++|||++.++++++++++++|+++||+++.||... ...++.++++. ++.+||++++||+||||
T Consensus 325 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPv 398 (499)
T d1ky8a_ 325 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPV 398 (499)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE------ETTEECCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred CCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccc------cccccccccccccccCCCCChhhhccccCce
Confidence 9999999999999999999999999999999999999999843 23344444443 45679999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCCCcCcHHHhh
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~ 513 (535)
++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||++..... ..|+ .||+|+++|.+|+
T Consensus 399 l~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~- 477 (499)
T d1ky8a_ 399 ASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAV- 477 (499)
T ss_dssp EEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTH-
T ss_pred EEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHH-
Confidence 999999999999999999999999999999999999999999999999999876542 3455 9999999999999
Q ss_pred ccCceeeee-cCCCCCCCcccc
Q 009397 514 NDPTKLKML-PHFSVPAIWWCQ 534 (535)
Q Consensus 514 ~~~~~~k~~-~~~~~~~~~~~~ 534 (535)
++|++.|++ -.|.....|||.
T Consensus 478 ~~~~~~k~i~~~~~~~~~~~y~ 499 (499)
T d1ky8a_ 478 EAVTAYKTIVFNYKGKGVWKYE 499 (499)
T ss_dssp HHHEEEEEEEEECTTSSSCSCC
T ss_pred HHhhCEEEEEEcCCCCCCCCCC
Confidence 589999998 477777999995
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=4.8e-83 Score=685.17 Aligned_cols=457 Identities=30% Similarity=0.440 Sum_probs=416.4
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.|++||+|+|+.+ +++++++||+||+++++++.++.+|+++||++|++|++.|+++|.++|.++|+++++.|.+++++
T Consensus 3 ~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~ 80 (474)
T d1euha_ 3 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80 (474)
T ss_dssp BCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 5789999999875 57899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccC--CCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS--SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
|++++++|+||+..++ .+|+...+..++++.............. ..........+++++|+|||++|+|||||+..+
T Consensus 81 la~~~~~e~Gk~~~~a-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~ 159 (474)
T d1euha_ 81 IGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 159 (474)
T ss_dssp HHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHhCCCcchh-ccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhh
Confidence 9999999999999998 5899999999999887766543322211 112223455678999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
+.++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+++|++ +.++.|+. .++.|.||||+.+++
T Consensus 160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~----~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~ 235 (474)
T d1euha_ 160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEA----FAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGE 235 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHH----HHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhchhhhhccccceecccccchHHHHHHHHH----HHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCcccccc
Confidence 99999999999999999999999999887776 456899999999999974 78888888 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.+++.++ .+|+++|+||+||+||++|||++.+++.+++++|.++||.|+++++||||+++|++|++.++++...++.|
T Consensus 236 ~i~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 236 RIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred chhhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 9998875 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
++.+. .++++++.....+++.+.+.++...|+..+.++. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~ 385 (474)
T d1euha_ 314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPII 385 (474)
T ss_dssp CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEEEEE
Confidence 98765 4689999999999999999999999988876554 578999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcccc-CCCC----CCCCCCcCcHHHhhccCc
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM-CQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~-~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
+|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++..+.. ..|+ .||+|+++|++|| ++|+
T Consensus 386 ~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l-~~~~ 464 (474)
T d1euha_ 386 RVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSI-EAMT 464 (474)
T ss_dssp EESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHH-HHTE
T ss_pred EeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHH-HHhC
Confidence 99999999999999999999999999999999999999999999999765543 2345 8999999999999 5799
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 465 ~~k~v 469 (474)
T d1euha_ 465 TVKSV 469 (474)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99986
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.9e-81 Score=662.38 Aligned_cols=418 Identities=27% Similarity=0.408 Sum_probs=380.6
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcC
Q 009397 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167 (535)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~ 167 (535)
|++||++|++||+.|+.+|.++|.++|+++++.|++|+++|++++++|+||+..++..+|+..+++.+++++++..++..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999999999999999999999999999999888999999999999988877766
Q ss_pred CcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 009397 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~ 247 (535)
+..............+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++.+++. .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~-----~~~ 156 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP-----QYM 156 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH-----HHS
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccc-----ccc
Confidence 544443333345567889999999999999999999999999999999999999999999999988877654 468
Q ss_pred CCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHH
Q 009397 248 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 248 p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~ 326 (535)
|+++++++.+.......+.. .+++|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~ 236 (446)
T d1ad3a_ 157 DQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236 (446)
T ss_dssp CTTTEEECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHT
T ss_pred cccccccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhc
Confidence 99999999988766666666 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC
Q 009397 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~ 406 (535)
++||.|++++|||||+++||+|+++|.++++.+ +|++.++++++||++++.+++++++.+++ ++...|+..
T Consensus 237 ~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~--- 307 (446)
T d1ad3a_ 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTW--- 307 (446)
T ss_dssp TTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCE---
T ss_pred CCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceee---
Confidence 999999999999999999999999999999888 89999999999999999999999988754 445444431
Q ss_pred CCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEE
Q 009397 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486 (535)
Q Consensus 407 ~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~ 486 (535)
...++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+
T Consensus 308 --~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~ 385 (446)
T d1ad3a_ 308 --DQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVT 385 (446)
T ss_dssp --ETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEE
T ss_pred --cCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEE
Confidence 356789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCcccc--CCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 487 INDFASNYM--CQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 487 IN~~~~~~~--~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+...... ..|| .||+|+++|.+|| ++|++.|++
T Consensus 386 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~ft~~k~v 426 (446)
T d1ad3a_ 386 ANDVIVHITVPTLPFGGVGNSGMGAYHGKKSF-ETFSHRRSC 426 (446)
T ss_dssp ESSSSGGGGCTTSCCCCCGGGEECCCSTHHHH-HHTEEEEEE
T ss_pred EeCCccCCCCCCCCccccccceeccchHHHHH-HHHhceeEE
Confidence 999765433 3345 8999999999999 589999986
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2e-77 Score=643.91 Aligned_cols=439 Identities=15% Similarity=0.185 Sum_probs=372.3
Q ss_pred CCeEEeecCCCCcEEE-EEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 009397 63 ETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (535)
Q Consensus 63 ~~~~~~~~P~tg~~l~-~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ 141 (535)
+++|+++||+|||.|+ +++.++.+|+++||++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+|||..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 4689999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhchhhcCCccc-----CCCcccccccceeeeecceEEEEEcCCchhhhhh--HHHHHHHHh
Q 009397 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYR-----SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVF 214 (535)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~--~~~i~~AL~ 214 (535)
++ .+|+..+++.++|+++..++....... +............+++|+|||++|+|||||+... ..++++||+
T Consensus 82 ~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALa 160 (504)
T d1ez0a_ 82 RL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 160 (504)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHH
Confidence 98 489999999999999877665433221 1111123445678889999999999999999744 468999999
Q ss_pred cCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhcc
Q 009397 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT 291 (535)
Q Consensus 215 aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~ 291 (535)
+||+||+|||+.+|.++.++.+++.++|.++|+|+|++|+|+|.+ +.++.|++ +|++|.||||+.+|+.|.+.++++
T Consensus 161 aGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~ 240 (504)
T d1ez0a_ 161 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240 (504)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred HhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999999999999975 67889988 899999999999999999999999
Q ss_pred CCceee--ccCCcceEEEecCCCHHHHH--HHHHHHHHHhcCCCCCCccEEEEecccHH-HHHHHHHHHHhcccCCCCCC
Q 009397 292 LTPVTL--ELGGKDAFIVCDDVDVPHVA--QIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLA 366 (535)
Q Consensus 292 ~~pv~~--elgGk~p~iV~~daDl~~aa--~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d-~f~~~L~~~~~~l~~G~~~~ 366 (535)
++|+.+ |+|||||+||++|||++.|+ ..++.++|.|+||.|++++|+||+++.++ .|++.+++.++.. +
T Consensus 241 ~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~ 314 (504)
T d1ez0a_ 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------S 314 (504)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------C
T ss_pred cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------c
Confidence 988655 99999999999999999875 47899999999999999999998887655 6777777766543 3
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEE---cCCCCCcccccccccceeeeee
Q 009397 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV---NVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 367 ~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~---~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
+++++||+++..+.+++ ++.+..+|+++..||. .+.+..|+++. ++..+|++++||+||||++|++
T Consensus 315 ~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~ 383 (504)
T d1ez0a_ 315 PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVV 383 (504)
T ss_dssp CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEE
T ss_pred cccccccchhhhhhhhh---hhhhhhhhhhcccccc--------cccccCCccccccccccccchhhcccccCCeeeeee
Confidence 46789999988877665 5667778888888876 33445555554 3445789999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecC--CHHHHHHHHhhcC--cceEEECCCCcccc-------CCCC----CCCCCCcCc
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNYM-------CQVF----KCIFDEFDS 508 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~--d~~~~~~~a~~l~--~G~v~IN~~~~~~~-------~~~~----~SG~G~~~g 508 (535)
|+|+||||+++|+++|||+++|||+ |..++.+++++|+ +|+|+||++++... ..|+ .||+| ..|
T Consensus 384 ~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G 462 (504)
T d1ez0a_ 384 CENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVG 462 (504)
T ss_dssp ESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSS
T ss_pred cCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cch
Confidence 9999999999999999999999996 5568999999986 89999999754211 1123 56644 458
Q ss_pred HHHhhccCceeee
Q 009397 509 VHVILNDPTKLKM 521 (535)
Q Consensus 509 ~~gl~~~~~~~k~ 521 (535)
.+|+. +|++...
T Consensus 463 ~~~i~-~f~r~v~ 474 (504)
T d1ez0a_ 463 AEAIH-RWLRPVA 474 (504)
T ss_dssp GGGGG-GGEEEEE
T ss_pred HHHHH-HHhchhh
Confidence 99995 5655444
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.3e-62 Score=515.25 Aligned_cols=383 Identities=15% Similarity=0.157 Sum_probs=306.6
Q ss_pred HHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhh------------HHHHHH
Q 009397 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE------------IMTTCE 153 (535)
Q Consensus 86 ~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~E------------i~~~~~ 153 (535)
+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+||+..++ .+| +...++
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~-~~e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG-VKESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcc-ccHHHHHHHhccHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999998876 355 444556
Q ss_pred HHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 009397 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (535)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~ 233 (535)
.+++++........... .........+.++|+||++++.|||||+..+++++++||++||+||+|||+.+|.++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~ 155 (414)
T d1o20a_ 80 ACETVIGLKDPVGEVID----SWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 155 (414)
T ss_dssp HHHHHHHSCCCTTCEEE----EEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhhhcccccc----ccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence 66666554332111100 00122455778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhccccEEEEeCChHHHHHHHHHHhccCCceeeccCCcc-eEEEecCC
Q 009397 234 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD-AFIVCDDV 311 (535)
Q Consensus 234 ~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~-p~iV~~da 311 (535)
+++++.+++...|+|.++++.+.+.. +....+. ..+.+.|+||...++.+.+.++++++++++|+||+| ++||++||
T Consensus 156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dA 234 (414)
T d1o20a_ 156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMI-RLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESA 234 (414)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT-TCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTS
T ss_pred hhhHHHhhhhhccccccccccccccchhhhhhcc-cccccCeEEEcccHHHHHHHhhhccccceecccCCCCCeeccccc
Confidence 99999999999999999999887654 3333333 445555566666677788888888899999998866 57788999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009397 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 391 (535)
Q Consensus 312 Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~ 391 (535)
|++.|++.++.+.|.+ ||.|++++|++||+++||+|++.|.+..++..++.+.++ . ..
T Consensus 235 d~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~----~~------- 292 (414)
T d1o20a_ 235 DLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE----------K----TR------- 292 (414)
T ss_dssp CHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH----------H----HH-------
T ss_pred chhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch----------h----hh-------
Confidence 9999999999998876 999999999999999999999999999887655432211 1 00
Q ss_pred HcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHH
Q 009397 392 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471 (535)
Q Consensus 392 ~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~ 471 (535)
.+.+.+... ....+++|+||||++|++++|+||||+++|+++|||+++|||+|.+
T Consensus 293 ----------------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~ 347 (414)
T d1o20a_ 293 ----------------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 347 (414)
T ss_dssp ----------------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ----------------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHH
Confidence 001111111 1234579999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcceEEECCCCccccCCCC----CCCC--CCcC--cHHHhhccCceeeee
Q 009397 472 RAREIAAQIQCGVAAINDFASNYMCQVF----KCIF--DEFD--SVHVILNDPTKLKML 522 (535)
Q Consensus 472 ~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~--G~~~--g~~gl~~~~~~~k~~ 522 (535)
+++++++++++|+|+||++..+....++ .||. |+++ |++|| ++|++.|++
T Consensus 348 ~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl-~~~t~~K~v 405 (414)
T d1o20a_ 348 NAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGL-RELTTYKFV 405 (414)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCT-GGGEEEEEE
T ss_pred HHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHH-HHhCeEEEE
Confidence 9999999999999999997654332222 3443 4444 78999 589999987
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-50 Score=425.33 Aligned_cols=396 Identities=15% Similarity=0.104 Sum_probs=275.3
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHH------HhcCCChhh-hhh-----hhHHHHHHH
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS------RDTGKTMVD-ASL-----GEIMTTCEK 154 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~------~etGk~~~e-a~~-----~Ei~~~~~~ 154 (535)
++++++++|++|++.|+.+|.++|.++|+++++.|++|+++|+++.. ++.|++... .++ ..+...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 46788999999999999999999999999999999999999988544 445543211 000 113333444
Q ss_pred HHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHH
Q 009397 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 234 (535)
Q Consensus 155 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~ 234 (535)
++..+...+-.... ........+......+.|+||+++| |+++| ..++...+.||++||+||+||++.++.|+..+
T Consensus 84 l~~i~~~~dpvg~~--~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 84 IKDVAELEDPVGKV--KMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHSCCSSSCE--EEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHhccccceeE--eeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 44443321110000 0000001123456677899999988 67777 56677888999999999999999999999988
Q ss_pred HHHHH----HHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEe
Q 009397 235 FRIIQ----AALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308 (535)
Q Consensus 235 ~~~i~----~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~ 308 (535)
+++++ +++.++|+|+++++++++..+.++.|.. .||.|+||||....+.+.+.+. +|++.++||++|+||+
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd 236 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLD 236 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEEC
T ss_pred HHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeec
Confidence 88876 5567789999999999987788887777 8999999999998888876553 6999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009397 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388 (535)
Q Consensus 309 ~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~ 388 (535)
+|||++.|++.++.++|+++|| |++.++++||+++++.|...+....+. |.. +.. ++. +.....
T Consensus 237 ~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv~------l~~--~~~----~~~~~~ 300 (436)
T d1vlua_ 237 EDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GVT------IHA--TKD----LKTAYF 300 (436)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CCC------BEE--CHH----HHHHHH
T ss_pred ccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---CcE------EEe--CHH----HHHHhh
Confidence 9999999999999999999998 999999999999998886655544432 111 110 121 222222
Q ss_pred HHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecC
Q 009397 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468 (535)
Q Consensus 389 ~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~ 468 (535)
+...++ |. ..+....|++....+.| +.+|.|+||++|++++|+||||+++|..++||+++|||+
T Consensus 301 ~~~~~~------~~-------~~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~ 364 (436)
T d1vlua_ 301 DKLNEL------GK-------LTEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 364 (436)
T ss_dssp HHHHHH------TC-------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred hhhhhc------cc-------ccccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEEC
Confidence 221111 11 12223334443333333 579999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCcceEEECCCCccccCCCC--------CCCCCCcCcHHHhhccCceeeee
Q 009397 469 SQHRAREIAAQIQCGVAAINDFASNYMCQVF--------KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 469 d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~--------~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|.+.+++|++++++|.|+||.+..|.....+ ..+..+..|+-|| +.+|+.|++
T Consensus 365 d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl-~~ltt~k~~ 425 (436)
T d1vlua_ 365 NKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGL-DGLVSYQYQ 425 (436)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCS-GGGEEEEEE
T ss_pred CHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcCh-HHhceEEEE
Confidence 9999999999999999999998766443322 2222333688888 789999997
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.1 Score=51.29 Aligned_cols=256 Identities=16% Similarity=0.154 Sum_probs=146.8
Q ss_pred cccceeeeecceEEEEEcCCc-hhhh-hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe
Q 009397 179 HKKAKVEFHPLGVVGAIVSWN-YPFH-NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~n-~P~~-~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~ 256 (535)
+.....++.|+--|++.+|.- +|+. +++...+||-.||..=|+-++|-...... ++ +.+.+|... +..
T Consensus 111 Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~~~~~~-l~-----aa~~~Gv~~----iy~ 180 (431)
T d1k75a_ 111 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI-LY-----AAQLCGVQD----VFN 180 (431)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSSCCHHH-HH-----HHHHTTCCE----EEE
T ss_pred CceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCCCcchH-HH-----HHHHcCccc----eEe
Confidence 445567788999999999954 3433 44556789999998766554443211111 11 223477752 222
Q ss_pred -CCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceee-ccCCcceEEE--ecCCCHHHHHHHHHHHHHH
Q 009397 257 -GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL-ELGGKDAFIV--CDDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 257 -~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~-elgGk~p~iV--~~daDl~~aa~~i~~~~f~ 326 (535)
|..+.-.+|.- .||.|+=.|+.-|...=..-..+.. .|-. -+.|.+=++| ++++|.+.++..++..+=+
T Consensus 181 ~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH 259 (431)
T d1k75a_ 181 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 259 (431)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHHHHhccCC
Confidence 33343344432 7999999998776544333332211 1211 1345554333 3348999988888765533
Q ss_pred hcCCCCCCccEEEEecc--cHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCC
Q 009397 327 SSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~ 404 (535)
... .+.++|..+ ..++..+.+.+.++.+.- . +.++.+.
T Consensus 260 ~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~r------------------~----~i~~~s~------------- 299 (431)
T d1k75a_ 260 GPD-----SQVILLTPAADMARRVAEAVERQLAELPR------------------A----ETARQAL------------- 299 (431)
T ss_dssp CTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCSS------------------C----HHHHHHH-------------
T ss_pred ccc-----ceeEEEeccHHHHHHHHHHHHHHhhhchH------------------H----HHHHhhh-------------
Confidence 322 245566544 444555555554443310 0 0111111
Q ss_pred CCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc-Ccc
Q 009397 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCG 483 (535)
Q Consensus 405 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l-~~G 483 (535)
+-.| ++.++|++||++++|..--= -..|.++|.+ .+..++ .+|
T Consensus 300 ----------------------------~~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAG 343 (431)
T d1k75a_ 300 ----------------------------NASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAG 343 (431)
T ss_dssp ----------------------------TTCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCS
T ss_pred ----------------------------ccce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcc
Confidence 1112 34578999999999994222 3678888874 566666 699
Q ss_pred eEEECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 484 VAAINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 484 ~v~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
.|++..+... |...+ | .+|.+||.|.-+.. +|.+..++
T Consensus 344 sIflG~~sp~a~GDY~aGpnHvLPT~G~Ar~~sgLsv~-dF~k~~s~ 389 (431)
T d1k75a_ 344 SVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLA-DFQKRMTV 389 (431)
T ss_dssp EEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCCCGG-GGEEEEEE
T ss_pred hhhcCCCCcchhhccccCCCccCCCCCceeecCCCCHH-HeeeeeeE
Confidence 9999987431 22222 2 89999999988884 56555444
|