Citrus Sinensis ID: 009423

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-----
MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSISDDGNSSIDGSSGGVSET
ccccccccccccccccccccccccccccccccccccEECccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEECcccccccccHHHHcccccHHHHHHHHHHcccEEEccccHHHHHHccccccccccccccccccccEEEECccccccccccHHHHHHHHHHHHccccccccccccccccccccccccEECccccHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHccccEEcHHHHHHHHHHcccEEEEEEEEccccccccEEEEEEEEcccccEEEEEEccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHHHHcccccEEEcccccccccccccccEEEEEEECccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
*****LYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPN***************************T*********FDL***TKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGL****************************
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MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSISDDGNSSIDGSSGGVSET

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Riboflavin biosynthesis protein ribBA, chloroplastic Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.confidentP47924
Riboflavin biosynthesis protein RibBA Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.probableQ9PLJ5
Riboflavin biosynthesis protein RibBA Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.probableB0KAI2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
3.-.-.-Hydrolases.probable
3.5.-.-Acting on carbon-nitrogen bonds, other than peptide bonds.probable
4.1.-.-Carbon-carbon lyases.probable
4.1.99.-Other carbon-carbon lyases.probable
3.5.4.-4'-demethylrebeccamycin synthase.probable
4.1.99.123,4-dihydroxy-2-butanone-4-phosphate synthase.probable
3.5.4.25GTP cyclohydrolase II.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1G57, chain A
Confidence level:very confident
Coverage over the Query: 107-310
View the alignment between query and template
View the model in PyMOL
Template: 2BZ1, chain A
Confidence level:very confident
Coverage over the Query: 313-485
View the alignment between query and template
View the model in PyMOL